GPN-loop GTPase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G12790 AT4G12790 AT4G12790 AT4G12790 AT4G12790 AT4G12790 |
| fragaria_vesca | FvH4_6g36140 FvH4_6g36141 FvH4_6g37261 FvH4_6g37261 FvH4_6g37261 FvH4_6g37261 FvH4_6g37261 FvH4_6g37261 FvH4_6g37261 FvH4_6g37261 |
| malus_domestica | MD09G1159000.v1.1 MD17G1145200.v1.1 |
| prunus_persica | Prupe.3G166900_v2.0.a1 Prupe.3G166900_v2.0.a1 Prupe.3G166900_v2.0.a1 |
| pyrus_communis | pycom09g07750 pycom17g13810 |
| rosa_chinensis | RchiOBHm_Chr2g0150081 RchiOBHm_Chr3g0481161 |
| rosa_laevigata | RLG00000020464 RLG00000023418 |
| rosa_multiflora | Rmu_sc0001169.1_g000004 Rmu_sc0009445.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00097450 |
| rosa_rugosa | Rorug02G0418500 Rorug02G0418600 Rorug02G0418700 Rorug02G0418800 Rorug02G0418900 Rorug02G0419000 Rorug02G0419100 |
| rosa_samantha | Rh2AG477700 Rh2BG490000 Rh2CG463500 Rh2DG498800 Rh3AG241100 |
| rosa_wichuraiana | Rw2G038970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 173 |
| AluBI | AGCT | 2 cut(s) | 22, 188 |
| AluI | AGCT | 2 cut(s) | 22, 188 |
| AlwI | GGATC | 1 cut(s) | 173 |
| ApeKI | GCWGC | 1 cut(s) | 99 |
| AsuHPI | GGTGA | 2 cut(s) | 59, 76 |
| BbvI | GCAGC | 1 cut(s) | 111 |
| BccI | CCATC | 1 cut(s) | 31 |
| BisI | GCNGC | 1 cut(s) | 100 |
| BlsI | GCNGC | 1 cut(s) | 101 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmrI | ACTGGG | 1 cut(s) | 53 |
| BmsI | GCATC | 1 cut(s) | 142 |
| BmuI | ACTGGG | 1 cut(s) | 53 |
| BpuEI | CTTGAG | 1 cut(s) | 106 |
| BsaBI | GATNNNNATC | 1 cut(s) | 156 |
| Bse1I | ACTGG | 1 cut(s) | 48 |
| Bse8I | GATNNNNATC | 1 cut(s) | 156 |
| BseJI | GATNNNNATC | 1 cut(s) | 156 |
| BseMII | CTCAG | 1 cut(s) | 23 |
| BseNI | ACTGG | 1 cut(s) | 48 |
| BseXI | GCAGC | 1 cut(s) | 111 |
| Bsp143I | GATC | 2 cut(s) | 157, 178 |
| BspCNI | CTCAG | 1 cut(s) | 22 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspPI | GGATC | 1 cut(s) | 173 |
| BsrI | ACTGG | 1 cut(s) | 48 |
| BssMI | GATC | 2 cut(s) | 157, 178 |
| BstDEI | CTNAG | 1 cut(s) | 9 |
| BstKTI | GATC | 2 cut(s) | 160, 181 |
| BstMBI | GATC | 2 cut(s) | 157, 178 |
| BstV1I | GCAGC | 1 cut(s) | 111 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 66, 101 |
| CviAII | CATG | 1 cut(s) | 61 |
| CviJI | RGCY | 5 cut(s) | 5, 22, 32, 119, 188 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 22, 32, 119, 188 |
| DdeI | CTNAG | 1 cut(s) | 9 |
| DpnI | GATC | 2 cut(s) | 159, 180 |
| DpnII | GATC | 2 cut(s) | 157, 178 |
| FaeI | CATG | 1 cut(s) | 64 |
| FaiI | YATR | 4 cut(s) | 57, 62, 104, 111 |
| FatI | CATG | 1 cut(s) | 60 |
| Fnu4HI | GCNGC | 1 cut(s) | 100 |
| Fsp4HI | GCNGC | 1 cut(s) | 100 |
| GluI | GCNGC | 1 cut(s) | 100 |
| Hin1II | CATG | 1 cut(s) | 64 |
| HinfI | GANTC | 1 cut(s) | 136 |
| HphI | GGTGA | 2 cut(s) | 59, 76 |
| Hpy188I | TCNGA | 1 cut(s) | 146 |
| Hpy188III | TCNNGA | 1 cut(s) | 182 |
| HpyAV | CCTTC | 1 cut(s) | 85 |
| HpyCH4V | TGCA | 1 cut(s) | 17 |
| HpyF3I | CTNAG | 1 cut(s) | 9 |
| Hsp92II | CATG | 1 cut(s) | 64 |
| Kzo9I | GATC | 2 cut(s) | 157, 178 |
| LmnI | GCTCC | 2 cut(s) | 10, 193 |
| LpnPI | CCDG | 1 cut(s) | 29 |
| Lsp1109I | GCAGC | 1 cut(s) | 111 |
| LweI | GCATC | 1 cut(s) | 142 |
| MalI | GATC | 2 cut(s) | 159, 180 |
| MboI | GATC | 2 cut(s) | 157, 178 |
| MboII | GAAGA | 1 cut(s) | 161 |
| MluCI | AATT | 1 cut(s) | 123 |
| MnlI | CCTC | 2 cut(s) | 18, 81 |
| MseI | TTAA | 1 cut(s) | 168 |
| NdeII | GATC | 2 cut(s) | 157, 178 |
| NlaIII | CATG | 1 cut(s) | 64 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| PfeI | GAWTC | 1 cut(s) | 136 |
| PkrI | GCNGC | 1 cut(s) | 101 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| SaqAI | TTAA | 1 cut(s) | 168 |
| SatI | GCNGC | 1 cut(s) | 100 |
| Sau3AI | GATC | 2 cut(s) | 157, 178 |
| SetI | ASST | 3 cut(s) | 24, 168, 190 |
| SfaNI | GCATC | 1 cut(s) | 142 |
| SgeI | CNNG | 6 cut(s) | 40, 56, 73, 92, 97, 145 |
| SmlI | CTYRAG | 1 cut(s) | 85 |
| SmoI | CTYRAG | 1 cut(s) | 85 |
| Sse9I | AATT | 1 cut(s) | 123 |
| TaqI | TCGA | 1 cut(s) | 134 |
| TasI | AATT | 1 cut(s) | 123 |
| TfiI | GAWTC | 1 cut(s) | 136 |
| Tru1I | TTAA | 1 cut(s) | 168 |
| Tru9I | TTAA | 1 cut(s) | 168 |
| TseI | GCWGC | 1 cut(s) | 99 |
| TspGWI | ACGGA | 1 cut(s) | 180 |