Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002226

Physical Location & Seq

Genomic Coordinates Forward (+)

53742962 .. 53745176

Gene Structure 2215 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0418600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGACCTACTATTTACCTTATGAAGATAACATGAAGAGGAAAAACATGTCTAGCACACCACAGTATGAAACCGGTGCTGTTGATTTGATTACACAAGCACCTGGAATTGAAAGAAAGAGAAAGAGAAAGGAATCTAATACCATTGACCAGAACGTTGAGCGACAAAAGCAGCAAACTGCCGAAAATTCTGAGAGCTTGGACAAATGCATTACACAAGAAGCTGGATCTCGAAAAAAACGAAAGAGAGAAAAATCTAATATTACTGGCAAGAGGGGGAAGCTTAGAAAGAAGCAACCTGGTGGAGTTGTAAATGGCATTGAAAAAAGTGTTGAGTCCACTGATCATATCTCACAATTGCCTGAATCTGTCATTCATCACATCCTTTCTCTCATTCGTTGTACAAAAGGTGCTGCTCGGACCAGTGTGTTGTCCAAGAGGTGGAGGGATGTATGGACTTCTTTCTCTGTTTTGACATTTGATCAACGCAAGTTTCAGAAACCAGAGGGAGTCCAAGATAAGAGCAAGAATGAGATGTTTAAGGACTTTATTGATCGGTCTCTTCAGAGCCAACTTGAGCAAAATTTAGGAATACGTAAATTTGAGCTACATTTGACCTCCTATGATCAAGAAATGGCGCGTGGTATGGAACAGTGGGTTGGACTTGCAACTGAAAATAACATCAAAGAGCTAGGTCTCCATGTTCACACAAGAGGAAATAATGTTCACAATTTTCCCAGGAATGCGTTTGCTTCAGATACACTAACTCGATTAAGGCTGCAGAGCTGTAAACTGGAAACTAGCTGCGCTGTAAAGCTTCCCCATCTGCAAAAGCTATATTTGCGGGATTGTAATGTTGATGAACAGAGAATCCAGCATATTATTTCCAGCTGCCCTTTAATTGAGGATTTGAGACTCATACGTTGCACGGGGTTGAAGTTTCTGCAGATTTCAAGTCTCCTTGAGCTTGATAGGGTTGAAGTATACCACTGCCGCGGACTGAAGAAGATTGAAGTTAAAGCTGCAAAGCTTCAGACATTTTGGTATTGTGGGAAGAATCGCACGTCTTGCAAACTTATCTTGAGTGGTTGTGAGTCTCTGAAAAGATTGACACTAGAGGACAAAAAAATGACAGACAATCAGTTTCGTGAACTATTCTTTGGCCTTCCTCTCCTCGAGAAGCTGGACCTAAGTAAATGCCTCAAATTGAAAAATATTACAATTGCAAGTCATCGACTAAACAGATTAGTCTTGAGGGGTTGCGAGAATCTACAGGGAGCCGAGATTGATACTCCAAATCTTCTTTCATTCGAGTATCAAGGTGATAAAATGCCCTTTTCTTTTCTGAATCCTATATCTTTGAAGGAGGCCAAGCTTTCTTTTGGGTCGGCTTCTGCTGGTCAGCTCAAATTCGATCACAATAAAGATGAGCCTTTTTGGTTTAAAAAGTTGCGGGATTTTCTTGGCAAGTTTGATCACAATACAGGCTTCAAACTGGTTGTCCGCACTAATAAGAATGTTATCATCTATGAAGATCTAAGAGGAATTTCACTTCCTCCTGTTCGTGGTCTCAAACTTGAAATAATCCAGTCTTCCGTGGGTACTGAAGAATTATTAAACAGTTCATTGCAGAAATGGCACCCAGAGACCCTATCTGTAGTATCATCTTCTAGCAGTGAATTCCCCAAGTTGGTACATGAGAAGATCATGGAGAGTAAGAAGGATCCAACCTGCTGCACATCTAACCATTCAAACAATAAATGTTGGTGGCACTCGTTGAAGTTTGGCAAGAAAGTGAACTTGAAGCGGGCCAAAGGCAAGTCGGGCTGGATTGCTTGGTTGAAGTTGAAGTCTTGTCCAACTGACCTGTACGAGATTACTTGTTTTAGTTTATTAAATAAAAAATCTGATAAGCATGGTAGGAAGGCATCTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ATP_bind_1

Protein Analysis

644

Amino Acids

74.03

Weight (kDa)

9.58

Isoelectric Point (pI)

49.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_At1g61320_AtMIF1	PF23622	194 - 354	4.7e-23	At1g61320/AtMIF1, LRR domain
LRR_At5g56370	PF24758	216 - 348	2.3e-16	FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1	PF23622	361 - 459	1.9e-11	At1g61320/AtMIF1, LRR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002226)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12790 AT4G12790 AT4G12790 AT4G12790 AT4G12790 AT4G12790
fragaria_vesca	FvH4_6g36140 FvH4_6g36141 FvH4_6g37261 FvH4_6g37261 FvH4_6g37261 FvH4_6g37261 FvH4_6g37261 FvH4_6g37261 FvH4_6g37261 FvH4_6g37261
malus_domestica	MD09G1159000.v1.1 MD17G1145200.v1.1
prunus_persica	Prupe.3G166900_v2.0.a1 Prupe.3G166900_v2.0.a1 Prupe.3G166900_v2.0.a1
pyrus_communis	pycom09g07750 pycom17g13810
rosa_chinensis	RchiOBHm_Chr2g0150081 RchiOBHm_Chr3g0481161
rosa_laevigata	RLG00000020464 RLG00000023418
rosa_multiflora	Rmu_sc0001169.1_g000004 Rmu_sc0009445.1_g000011
rosa_roxburghii	Rroxscaffold_2G00097450
rosa_rugosa	Rorug02G0418500 Rorug02G0418600 Rorug02G0418700 Rorug02G0418800 Rorug02G0418900 Rorug02G0419000 Rorug02G0419100
rosa_samantha	Rh2AG477700 Rh2BG490000 Rh2CG463500 Rh2DG498800 Rh3AG241100
rosa_wichuraiana	Rw2G038970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1736
AccB1I	GGYRCC	1 cut(s)	1635
AccB7I	CCANNNNNTGG	1 cut(s)	438
AccI	GTMKAC	1 cut(s)	981
AccII	CGCG	2 cut(s)	637, 993
AciI	CCGC	6 cut(s)	841, 991, 993, 1450, 1501, 1804
AclI	AACGTT	1 cut(s)	153
AclWI	GGATC	3 cut(s)	232, 1715, 1728
AcsI	RAATTY	6 cut(s)	184, 580, 596, 1406, 1542, 1676
AcuI	CTGAAG	5 cut(s)	545, 735, 1013, 1019, 1623
AfaI	GTAC	4 cut(s)	400, 1600, 1692, 1868
AfiI	CCNNNNNNNGG	3 cut(s)	438, 1562, 1687
AflIII	ACRYGT	1 cut(s)	45
AgeI	ACCGGT	1 cut(s)	71
AjiI	CACGTC	1 cut(s)	1062
AjnI	CCWGG	3 cut(s)	100, 295, 734
AjuI	GAANNNNNNNTTGG	6 cut(s)	639, 671, 1140, 1172, 1285, 1317
AloI	GAACNNNNNNTCC	4 cut(s)	705, 737, 852, 884
Alw26I	GTCTC	7 cut(s)	561, 698, 904, 959, 1098, 1571, 1637
AlwI	GGATC	3 cut(s)	232, 1715, 1728
Ama87I	CYCGRG	1 cut(s)	1172
AoxI	GGCC	3 cut(s)	1159, 1365, 1806
ApeKI	GCWGC	7 cut(s)	169, 410, 775, 801, 888, 1019, 1731
ApoI	RAATTY	6 cut(s)	184, 580, 596, 1406, 1542, 1676
ArsI	GACNNNNNNTTYG	2 cut(s)	1482, 1514
AsiGI	ACCGGT	1 cut(s)	71
AspLEI	GCGC	2 cut(s)	637, 806
AspS9I	GGNCC	3 cut(s)	417, 1183, 1806
AsuHPI	GGTGA	1 cut(s)	1331
AvaI	CYCGRG	1 cut(s)	1172
AvaII	GGWCC	2 cut(s)	417, 1183
BamHI	GGATCC	1 cut(s)	1720
BanI	GGYRCC	1 cut(s)	1635
BbsI	GAAGAC	1 cut(s)	1581
BbvI	GCAGC	7 cut(s)	181, 397, 762, 788, 875, 1006, 1718
BccI	CCATC	1 cut(s)	828
BciT130I	CCWGG	3 cut(s)	102, 297, 736
BclI	TGATCA	4 cut(s)	340, 478, 622, 1471
BcoDI	GTCTC	7 cut(s)	561, 698, 904, 959, 1098, 1571, 1637
BfaI	CTAG	5 cut(s)	51, 689, 798, 1112, 1668
BfmI	CTRYAG	4 cut(s)	776, 941, 1268, 1653
BfuAI	ACCTGC	1 cut(s)	1736
BglII	AGATCT	1 cut(s)	1531
BisI	GCNGC	8 cut(s)	170, 411, 776, 802, 889, 991, 1020, 1732
BlsI	GCNGC	8 cut(s)	171, 412, 777, 803, 890, 992, 1021, 1733
Bme1390I	CCNGG	3 cut(s)	102, 297, 736
Bme18I	GGWCC	2 cut(s)	417, 1183
BmeT110I	CYCGRG	1 cut(s)	1172
BmgBI	CACGTC	1 cut(s)	1062
BmgT120I	GGNCC	3 cut(s)	417, 1183, 1806
BmiI	GGNNCC	3 cut(s)	1276, 1637, 1722
BmrFI	CCNGG	3 cut(s)	102, 297, 736
BpiI	GAAGAC	1 cut(s)	1581
BpuEI	CTTGAG	4 cut(s)	593, 980, 1099, 1270
BsaAI	YACGTR	1 cut(s)	593
BsaI	GGTCTC	4 cut(s)	561, 698, 1571, 1637
BsaJI	CCNNGG	3 cut(s)	734, 991, 1593
BsaWI	WCCGGW	1 cut(s)	71
Bsc4I	CCNNNNNNNGG	3 cut(s)	438, 1562, 1687
Bse118I	RCCGGY	1 cut(s)	71
Bse1I	ACTGG	5 cut(s)	268, 420, 795, 1497, 1585
Bse3DI	GCAATG	1 cut(s)	1622
BseBI	CCWGG	3 cut(s)	102, 297, 736
BseDI	CCNNGG	3 cut(s)	734, 991, 1593
BseGI	GGATG	2 cut(s)	378, 451
BseLI	CCNNNNNNNGG	3 cut(s)	438, 1562, 1687
BseMI	GCAATG	1 cut(s)	1622
BseMII	CTCAG	1 cut(s)	180
BseNI	ACTGG	5 cut(s)	268, 420, 795, 1497, 1585
BseRI	GAGGAG	1 cut(s)	1160
BseXI	GCAGC	7 cut(s)	181, 397, 762, 788, 875, 1006, 1718
BsgI	GTGCAG	1 cut(s)	1717
Bsh1236I	CGCG	2 cut(s)	637, 993
BshFI	GGCC	3 cut(s)	1161, 1367, 1808
BshNI	GGYRCC	1 cut(s)	1635
BshTI	ACCGGT	1 cut(s)	71
BsiHKCI	CYCGRG	1 cut(s)	1172
BsiSI	CCGG	1 cut(s)	72
BslI	CCNNNNNNNGG	3 cut(s)	438, 1562, 1687
BsmAI	GTCTC	7 cut(s)	561, 698, 904, 959, 1098, 1571, 1637
BsmI	GAATGC	1 cut(s)	745
BsnI	GGCC	3 cut(s)	1161, 1367, 1808
Bso31I	GGTCTC	4 cut(s)	561, 698, 1571, 1637
BsoBI	CYCGRG	1 cut(s)	1172
Bsp1407I	TGTACA	1 cut(s)	398
BspACI	CCGC	6 cut(s)	841, 991, 993, 1450, 1501, 1804
BspANI	GGCC	3 cut(s)	1161, 1367, 1808
BspCNI	CTCAG	1 cut(s)	181
BspFNI	CGCG	2 cut(s)	637, 993
BspLI	GGNNCC	3 cut(s)	1276, 1637, 1722
BspMAI	CTGCAG	2 cut(s)	780, 945
BspMI	ACCTGC	1 cut(s)	1736
BspPI	GGATC	3 cut(s)	232, 1715, 1728
BspT107I	GGYRCC	1 cut(s)	1635
BspTNI	GGTCTC	4 cut(s)	561, 698, 1571, 1637
BsrDI	GCAATG	1 cut(s)	1622
BsrFI	RCCGGY	1 cut(s)	71
BsrGI	TGTACA	1 cut(s)	398
BsrI	ACTGG	5 cut(s)	268, 420, 795, 1497, 1585
BssAI	RCCGGY	1 cut(s)	71
BssECI	CCNNGG	3 cut(s)	734, 991, 1593
BssNAI	GTATAC	1 cut(s)	982
Bst1107I	GTATAC	1 cut(s)	982
Bst2UI	CCWGG	3 cut(s)	102, 297, 736
Bst4CI	ACNGT	3 cut(s)	63, 651, 1619
Bst6I	CTCTTC	2 cut(s)	29, 564
BstAPI	GCANNNNNTGC	1 cut(s)	1065
BstAUI	TGTACA	1 cut(s)	398
BstBAI	YACGTR	1 cut(s)	593
BstC8I	GCNNGC	1 cut(s)	1806
BstDEI	CTNAG	4 cut(s)	189, 281, 1187, 1535
BstDSI	CCRYGG	2 cut(s)	991, 1593
BstF5I	GGATG	2 cut(s)	378, 451
BstFNI	CGCG	2 cut(s)	637, 993
BstHHI	GCGC	2 cut(s)	637, 806
BstMAI	GTCTC	7 cut(s)	561, 698, 904, 959, 1098, 1571, 1637
BstMWI	GCNNNNNNNGC	5 cut(s)	166, 838, 1065, 1633, 1821
BstNI	CCWGG	3 cut(s)	102, 297, 736
BstNSI	RCATGY	1 cut(s)	49
BstSCI	CCNGG	3 cut(s)	100, 295, 734
BstSFI	CTRYAG	4 cut(s)	776, 941, 1268, 1653
BstSNI	TACGTA	1 cut(s)	593
BstUI	CGCG	2 cut(s)	637, 993
BstV1I	GCAGC	7 cut(s)	181, 397, 762, 788, 875, 1006, 1718
BstV2I	GAAGAC	1 cut(s)	1581
BstX2I	RGATCY	3 cut(s)	224, 1531, 1720
BstYI	RGATCY	3 cut(s)	224, 1531, 1720
BstZ17I	GTATAC	1 cut(s)	982
BsuRI	GGCC	3 cut(s)	1161, 1367, 1808
BtgI	CCRYGG	2 cut(s)	991, 1593
BtrI	CACGTC	1 cut(s)	1062
BtsCI	GGATG	2 cut(s)	378, 451
BtsI	GCAGTG	2 cut(s)	985, 1678
BtsIMutI	CAGTG	5 cut(s)	336, 427, 656, 985, 1678
BveI	ACCTGC	1 cut(s)	1736
Cac8I	GCNNGC	1 cut(s)	1806
CfoI	GCGC	2 cut(s)	637, 806
Cfr10I	RCCGGY	1 cut(s)	71
Cfr13I	GGNCC	3 cut(s)	417, 1183, 1806
Cfr42I	CCGCGG	1 cut(s)	994
CsiI	ACCWGGT	1 cut(s)	295
Csp6I	GTAC	4 cut(s)	399, 1599, 1691, 1867
CspAI	ACCGGT	1 cut(s)	71
CviAII	CATG	6 cut(s)	31, 46, 698, 1694, 1705, 1913
CviQI	GTAC	4 cut(s)	399, 1599, 1691, 1867
DdeI	CTNAG	4 cut(s)	189, 281, 1187, 1535
DraI	TTTAAA	1 cut(s)	1441
Eam1104I	CTCTTC	2 cut(s)	29, 564
EarI	CTCTTC	2 cut(s)	29, 564
Eco105I	TACGTA	1 cut(s)	593
Eco31I	GGTCTC	4 cut(s)	561, 698, 1571, 1637
Eco47I	GGWCC	2 cut(s)	417, 1183
Eco57I	CTGAAG	5 cut(s)	545, 735, 1013, 1019, 1623
Eco88I	CYCGRG	1 cut(s)	1172
EcoRI	GAATTC	1 cut(s)	1676
EcoRII	CCWGG	3 cut(s)	100, 295, 734
EcoT22I	ATGCAT	1 cut(s)	209
FaeI	CATG	6 cut(s)	34, 49, 701, 1697, 1708, 1916
FatI	CATG	6 cut(s)	30, 45, 697, 1693, 1704, 1912
FauI	CCCGC	3 cut(s)	834, 1443, 1797
FbaI	TGATCA	4 cut(s)	340, 478, 622, 1471
FblI	GTMKAC	1 cut(s)	981
Fnu4HI	GCNGC	8 cut(s)	170, 411, 776, 802, 889, 991, 1020, 1732
FokI	GGATG	2 cut(s)	365, 458
Fsp4HI	GCNGC	8 cut(s)	170, 411, 776, 802, 889, 991, 1020, 1732
FspBI	CTAG	5 cut(s)	51, 689, 798, 1112, 1668
GlaI	GCGC	2 cut(s)	636, 805
GluI	GCNGC	8 cut(s)	170, 411, 776, 802, 889, 991, 1020, 1732
HaeIII	GGCC	3 cut(s)	1161, 1367, 1808
HapII	CCGG	1 cut(s)	72
HhaI	GCGC	2 cut(s)	637, 806
Hin1II	CATG	6 cut(s)	34, 49, 701, 1697, 1708, 1916
Hin6I	GCGC	2 cut(s)	635, 804
HinP1I	GCGC	2 cut(s)	635, 804
HindIII	AAGCTT	4 cut(s)	278, 812, 1025, 1370
HpaII	CCGG	1 cut(s)	72
HphI	GGTGA	1 cut(s)	1331
Hpy166II	GTNNAC	7 cut(s)	336, 703, 724, 788, 982, 1148, 1795
Hpy188I	TCNGA	9 cut(s)	190, 417, 495, 564, 754, 1032, 1098, 1344, 1906
Hpy188III	TCNNGA	6 cut(s)	228, 626, 1078, 1145, 1174, 1249
Hpy8I	GTNNAC	7 cut(s)	336, 703, 724, 788, 982, 1148, 1795
HpyAV	CCTTC	4 cut(s)	1172, 1354, 1711, 1915
HpyCH4III	ACNGT	3 cut(s)	63, 651, 1619
HpyCH4IV	ACGT	4 cut(s)	153, 592, 919, 1061
HpyF10VI	GCNNNNNNNGC	5 cut(s)	166, 838, 1065, 1633, 1821
HpyF3I	CTNAG	4 cut(s)	189, 281, 1187, 1535
HpySE526I	ACGT	4 cut(s)	153, 592, 919, 1061
Hsp92II	CATG	6 cut(s)	34, 49, 701, 1697, 1708, 1916
HspAI	GCGC	2 cut(s)	635, 804
Ksp22I	TGATCA	4 cut(s)	340, 478, 622, 1471
KspI	CCGCGG	1 cut(s)	994
LmnI	GCTCC	1 cut(s)	1274
Lsp1109I	GCAGC	7 cut(s)	181, 397, 762, 788, 875, 1006, 1718
MabI	ACCWGGT	1 cut(s)	295
MaeI	CTAG	5 cut(s)	51, 689, 798, 1112, 1668
MaeII	ACGT	4 cut(s)	153, 592, 919, 1061
MfeI	CAATTG	2 cut(s)	353, 1218
MflI	RGATCY	3 cut(s)	224, 1531, 1720
MlyI	GAGTC	4 cut(s)	341, 516, 906, 1100
MmeI	TCCRAC	3 cut(s)	637, 1748, 1880
Mph1103I	ATGCAT	1 cut(s)	209
MseI	TTAA	8 cut(s)	537, 770, 896, 1014, 1440, 1613, 1892, 1933
MspA1I	CMGCKG	2 cut(s)	888, 993
MspI	CCGG	1 cut(s)	72
MspR9I	CCNGG	3 cut(s)	102, 297, 736
MunI	CAATTG	2 cut(s)	353, 1218
Mva1269I	GAATGC	1 cut(s)	745
MvaI	CCWGG	3 cut(s)	102, 297, 736
MvnI	CGCG	2 cut(s)	637, 993
MwoI	GCNNNNNNNGC	5 cut(s)	166, 838, 1065, 1633, 1821
NlaIII	CATG	6 cut(s)	34, 49, 701, 1697, 1708, 1916
NlaIV	GGNNCC	3 cut(s)	1276, 1637, 1722
NmeAIII	GCCGAG	1 cut(s)	1303
NsiI	ATGCAT	1 cut(s)	209
NspI	RCATGY	1 cut(s)	49
PaeR7I	CTCGAG	1 cut(s)	1172
PciI	ACATGT	1 cut(s)	45
PcsI	WCGNNNNNNNCGW	1 cut(s)	235
PctI	GAATGC	1 cut(s)	745
PfeI	GAWTC	6 cut(s)	131, 362, 867, 1054, 1264, 1345
PflMI	CCANNNNNTGG	1 cut(s)	438
PinAI	ACCGGT	1 cut(s)	71
PkrI	GCNGC	8 cut(s)	171, 412, 777, 803, 890, 992, 1021, 1733
PleI	GAGTC	4 cut(s)	340, 515, 906, 1099
PpsI	GAGTC	4 cut(s)	340, 515, 906, 1099
Ppu21I	YACGTR	1 cut(s)	593
PscI	ACATGT	1 cut(s)	45
Psp1406I	AACGTT	1 cut(s)	153
Psp6I	CCWGG	3 cut(s)	100, 295, 734
PspGI	CCWGG	3 cut(s)	100, 295, 734
PspN4I	GGNNCC	3 cut(s)	1276, 1637, 1722
PspPI	GGNCC	3 cut(s)	417, 1183, 1806
PstI	CTGCAG	2 cut(s)	780, 945
PsuI	RGATCY	3 cut(s)	224, 1531, 1720
PvuII	CAGCTG	1 cut(s)	888
RsaI	GTAC	4 cut(s)	400, 1600, 1692, 1868
RsaNI	GTAC	4 cut(s)	399, 1599, 1691, 1867
SacII	CCGCGG	1 cut(s)	994
SaqAI	TTAA	8 cut(s)	537, 770, 896, 1014, 1440, 1613, 1892, 1933
SatI	GCNGC	8 cut(s)	170, 411, 776, 802, 889, 991, 1020, 1732
Sau96I	GGNCC	3 cut(s)	417, 1183, 1806
SchI	GAGTC	4 cut(s)	341, 516, 906, 1100
ScrFI	CCNGG	3 cut(s)	102, 297, 736
SexAI	ACCWGGT	1 cut(s)	295
SfcI	CTRYAG	4 cut(s)	776, 941, 1268, 1653
Sfr274I	CTCGAG	1 cut(s)	1172
Sfr303I	CCGCGG	1 cut(s)	994
SgrBI	CCGCGG	1 cut(s)	994
SinI	GGWCC	2 cut(s)	417, 1183
SlaI	CTCGAG	1 cut(s)	1172
SmlI	CTYRAG	5 cut(s)	572, 959, 1078, 1172, 1249
SmoI	CTYRAG	5 cut(s)	572, 959, 1078, 1172, 1249
SnaBI	TACGTA	1 cut(s)	593
SsiI	CCGC	6 cut(s)	841, 991, 993, 1450, 1501, 1804
SspI	AATATT	2 cut(s)	259, 1213
SspMI	CTAG	5 cut(s)	51, 689, 798, 1112, 1668
StyD4I	CCNGG	3 cut(s)	100, 295, 734
TaaI	ACNGT	3 cut(s)	63, 651, 1619
TaiI	ACGT	4 cut(s)	156, 595, 922, 1064
TaqI	TCGA	6 cut(s)	229, 766, 1173, 1231, 1308, 1410
TaqII	GACCGA	1 cut(s)	543
TatI	WGTACW	1 cut(s)	398
TauI	GCSGC	1 cut(s)	993
TfiI	GAWTC	6 cut(s)	131, 362, 867, 1054, 1264, 1345
Tru1I	TTAA	8 cut(s)	537, 770, 896, 1014, 1440, 1613, 1892, 1933
Tru9I	TTAA	8 cut(s)	537, 770, 896, 1014, 1440, 1613, 1892, 1933
TscAI	CASTG	5 cut(s)	343, 427, 656, 992, 1678
TseI	GCWGC	7 cut(s)	169, 410, 775, 801, 888, 1019, 1731
TspDTI	ATGAA	8 cut(s)	36, 47, 81, 362, 873, 1293, 1542, 1611
TspGWI	ACGGA	1 cut(s)	1582
TspRI	CASTG	5 cut(s)	343, 427, 656, 992, 1678
Van91I	CCANNNNNTGG	1 cut(s)	438
VpaK11BI	GGWCC	2 cut(s)	417, 1183
XapI	RAATTY	6 cut(s)	184, 580, 596, 1406, 1542, 1676
XceI	RCATGY	1 cut(s)	49
XhoI	CTCGAG	1 cut(s)	1172
XmiI	GTMKAC	1 cut(s)	981
XspI	CTAG	5 cut(s)	51, 689, 798, 1112, 1668
Zsp2I	ATGCAT	1 cut(s)	209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.