FvH4_6g39740

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0006945
Physical Location & Seq
Forward (+)
31375135 .. 31379635
4501 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g39740.t1

Sequence Viewer

Length: 2220 bp
ATGAAGCTGAGGTCAATAGGTGAAAAGGGTACCCAAGTTTTTCACCAAAACCTGAAGATTACCCAGTTGGGGAAGTTGGGTCGAATCGATGAAGCAATCAAAGTTTTCTCACAGATGACACAAAGGAACACTGTCACATACAACTCTATGATCTCTGCATATGCTAAAAATGGTAGAGTTGGTAATGCACGTCAGCTGTTCGATGAAATGCCTCACAGAAACTTGGTTTCTTGGAACACTATGATTTCTGGGTACCTGCATAACAATGAGGTCGAAGAAGCTTATGGGATTTTTGTCAGAATGCCGGAAAGGGATATGTTCTCGTGGACTTTGATGATTACTTGCTACACAAGGAACGGTGAGCTTGAGAGAGCTAGAGAGCTGTTTGATTTGCTTCCGGATAAGCGTGACGCGGCTTGTTGGAATGCCATGATTGCAGGGTATTCGAAGAAGGGGAGGTTTGATGAGGCGAAGAGAATGTTTGATGAAATGCCGGTGAAGAATTTGGTTTCTTGTAATTCAATGCTTGCAGGGTATACTAAGAATGGGGAAATGTGTTTGGGGTTGAGGTTTTTTCAGGAGATGCCTCAGAGGAATGTGGTTTCGTGGAATTTGGTGTTGGATGGGTTCGTTCAGGTTGGTGATTTGGGTTCTGCTTGGCGGTATTTTGAGAAAATTCCAGACCCCAATGTGGTTTCGTGGGTTACAATGTTGTGTGGGTTTGCGCGGAATGGGAAAATTGCGCAGGCTGAGGGTCTGTTTGAGCAGATGCCAAGTAGAAATGTGGTTGCTTGGAATGCAATGCTTGCGGCCTATGTTCAAGACCAGCAAGTTGACAAGGCTGTCAAAATATTCAGGGATATGCCAGAGATGGATTCGGTGTCATGGACTACAATGATCAATGGCTATGTTCGCGCTGGCAAGCTTGAGGAAGCAAGGGAATTGCTAAACCGGATGCCATACAAGAACATCGGAGCACAAACAGCAATGATATCTGGGTATGCTCATAATGGAAGGATGGATGAAGCAAGTCAGATCTTCAATCAGATTGCTATTCGTGATGCTGTTTGTTGGAACACAATGATTGCCGGCTATGCTCAGTGTGGCAGAATGGTTGAAGCTCTATCTCTTTTCAGAAAAATGACTAACAAGGATGCCGTTTCTTGGAATACTATGATAACTGGTTATGCTCAAGTAGGGGAGATGGATAAAGCACTGCAAATCTTCGAGCAGATGGGTGAGAAGAACACAGTTTCTTGGAATTCTCTAATAACAGGTTATGTGCAGAACGGGTTATATCTGGATGCACTCGAGAGTACTGTGGTCATGGGACGGGAAGGAAAGAGGCCCGATCAGTCAACTTTTTCAAGTGGTTTGAGTGCATGTGCTAATCTTGCAGCTTTGCAAGTGGGAAGGCAACTTCACCATTTGGTTGTGAAGACTGGCTATCTAAATGATTTGTTTGTCAGCAATGCCTTGATTAGTATGTATGCTAAATGTGGAATGGTTGTGAGTGCTAAACAAGTGTTCAAAGATATCAATCATGGTGATATTGTTTCTTGGAATTCTTTGATATCTGGGTATGCTCTAAACGGGTATGGTGAAGAGGCAGTAGAACTCTTTGAAGAAATGCAAATAGAAGGGTTGAATCCAGATCAACTGACCTTTGTTGGAGTGTTGTCTGCATGCAGTCACAGTGGGCTAGTTGATCGGGGATTAGAAGTGTTTAAGAGCATGACTGAAGTTCACCTTATTGAACCTCTAGCCGAACACTATGCTTGCATGGTAGACTTGCTTGGCCGTGCAGGGAGGTTAGAGGAAGCTTTTGAAATGGTGAGGGATATGAAGATCAAGGCAACCGCCAGAGTGTGGGGTGCATTGCTTGGAGCTTCCAGGATACACCGGAATCTAAAATTTGGAAAGTATGCTACCAAAAAGCTTTTAGAACTTGAACCTGATAAAACTTCAAATTATGTTCTCTTGTCAAACATGAATGCTGAGGCAGGCAGATGGGATGAGGTTGAGAGAGTCAGGGTGTTGATGAAAGAAAGTGACACGGACAAGCAACCCGGCTGCAGTTGGATTGAAGTCAGAAATCAGGTGCATGCTTTTCTCTTTGATGATCCTGTGCAACCTAGAACAGAAGAGATATGCAGTGTGTTGAAGTCTTCAGCCACAGAGATGATGAACACAAGTTCCTTCATGACTCCTTACAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR

Protein Analysis

740

Amino Acids

83.43

Weight (kDa)

6.25

Isoelectric Point (pI)

31.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_1 PF12854 42 - 70 1.6e-09 PPR repeat
PPR_2 PF13041 42 - 74 6.6e-09 PPR repeat family
PPR PF01535 45 - 74 4e-09 PPR repeat
PPR_2 PF13041 74 - 104 2.2e-06 PPR repeat family
PPR PF01535 76 - 105 2.9e-07 PPR repeat
PPR_1 PF12854 136 - 164 2.4e-06 PPR repeat
PPR_2 PF13041 137 - 168 2.1e-07 PPR repeat family
PPR PF01535 140 - 168 1.1e-08 PPR repeat
PPR_2 PF13041 229 - 262 5.8e-06 PPR repeat family
PPR_2 PF13041 260 - 290 9.3e-07 PPR repeat family
PPR_1 PF12854 291 - 319 3.3e-07 PPR repeat
PPR_2 PF13041 292 - 324 1.7e-07 PPR repeat family
PPR PF01535 294 - 323 3.8e-09 PPR repeat
PPR_2 PF13041 354 - 384 3.8e-07 PPR repeat family
PPR_1 PF12854 354 - 382 1.7e-06 PPR repeat
PPR PF01535 356 - 384 1.6e-08 PPR repeat
PPR_2 PF13041 385 - 416 4.8e-08 PPR repeat family
PPR_1 PF12854 385 - 412 2.3e-06 PPR repeat
PPR PF01535 387 - 416 1.5e-08 PPR repeat
PPR_2 PF13041 415 - 464 3.8e-07 PPR repeat family
PPR_2 PF13041 517 - 564 8.9e-12 PPR repeat family
PPR_1 PF12854 517 - 545 3.1e-06 PPR repeat
PPR PF01535 519 - 548 1.4e-09 PPR repeat
E_motif PF20431 634 - 696 2.9e-23 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 842
Acc16I TGCGCA 1 cut(s) 744
Acc36I ACCTGC 1 cut(s) 264
Acc65I GGTACC 2 cut(s) 29, 252
AccB1I GGYRCC 2 cut(s) 29, 252
AccB7I CCANNNNNTGG 1 cut(s) 1869
AccI GTMKAC 2 cut(s) 536, 1788
AccII CGCG 3 cut(s) 413, 727, 915
AccIII TCCGGA 1 cut(s) 397
AciI CCGC 5 cut(s) 413, 661, 727, 809, 1860
AclWI GGATC 1 cut(s) 2117
AcoI YGGCCR 1 cut(s) 1798
AcsI RAATTY 6 cut(s) 502, 610, 675, 1261, 1564, 1913
AcuI CTGAAG 3 cut(s) 74, 1761, 2154
AfaI GTAC 3 cut(s) 31, 254, 1318
AfiI CCNNNNNNNGG 4 cut(s) 69, 691, 1164, 1869
AjiI CACGTC 1 cut(s) 191
AjnI CCWGG 1 cut(s) 1892
AjuI GAANNNNNNNTTGG 2 cut(s) 602, 634
AloI GAACNNNNNNTCC 2 cut(s) 2180, 2212
Alw21I GWGCWC 1 cut(s) 979
AlwI GGATC 1 cut(s) 2117
Ama87I CYCGRG 1 cut(s) 1310
Aor13HI TCCGGA 1 cut(s) 397
AoxI GGCC 3 cut(s) 810, 1346, 1798
ApeKI GCWGC 2 cut(s) 1397, 2073
ApoI RAATTY 6 cut(s) 502, 610, 675, 1261, 1564, 1913
Asp718I GGTACC 2 cut(s) 29, 252
AspLEI GCGC 3 cut(s) 727, 745, 917
AspS9I GGNCC 1 cut(s) 1347
AsuC2I CCSGG 1 cut(s) 2070
AsuII TTCGAA 1 cut(s) 446
AvaI CYCGRG 1 cut(s) 1310
BaeI ACNNNNGTAYC 2 cut(s) 21, 54
BanI GGYRCC 2 cut(s) 29, 252
BauI CACGAG 1 cut(s) 322
BbsI GAAGAC 2 cut(s) 1445, 2160
Bbv12I GWGCWC 1 cut(s) 979
BbvCI CCTCAGC 3 cut(s) 8, 750, 1998
BbvI GCAGC 2 cut(s) 1409, 2060
BccI CCATC 6 cut(s) 617, 865, 1012, 1198, 1228, 2004
BceAI ACGGC 2 cut(s) 1142, 1785
BcgI CGANNNNNNTGC 4 cut(s) 426, 460, 1757, 1791
BciT130I CCWGG 1 cut(s) 1894
BciVI GTATCC 1 cut(s) 1890
BclI TGATCA 1 cut(s) 897
BcnI CCSGG 1 cut(s) 2070
BfaI CTAG 4 cut(s) 375, 1703, 1763, 2136
BfmI CTRYAG 1 cut(s) 2074
BfuAI ACCTGC 1 cut(s) 264
BfuI GTATCC 1 cut(s) 1890
BglII AGATCT 1 cut(s) 1035
BisI GCNGC 4 cut(s) 414, 810, 1398, 2074
BlsI GCNGC 4 cut(s) 415, 811, 1399, 2075
BmcAI AGTACT 1 cut(s) 1318
Bme1390I CCNGG 2 cut(s) 1894, 2070
BmeT110I CYCGRG 1 cut(s) 1310
BmgBI CACGTC 1 cut(s) 191
BmgT120I GGNCC 1 cut(s) 1347
BmiI GGNNCC 2 cut(s) 31, 254
BmrFI CCNGG 2 cut(s) 1894, 2070
BmrI ACTGGG 1 cut(s) 58
BmsI GCATC 6 cut(s) 573, 759, 945, 1051, 1144, 1294
BmuI ACTGGG 1 cut(s) 58
BpiI GAAGAC 2 cut(s) 1445, 2160
Bpu10I CCTNAGC 3 cut(s) 8, 750, 1998
Bpu14I TTCGAA 1 cut(s) 446
BpuEI CTTGAG 3 cut(s) 386, 947, 1176
BpuMI CCSGG 1 cut(s) 2070
Bsa29I ATCGAT 1 cut(s) 87
BsaBI GATNNNNATC 1 cut(s) 1539
BsaWI WCCGGW 3 cut(s) 397, 951, 1902
Bsc4I CCNNNNNNNGG 4 cut(s) 69, 691, 1164, 1869
Bse118I RCCGGY 2 cut(s) 493, 1088
Bse1I ACTGG 3 cut(s) 64, 1186, 1447
Bse3DI GCAATG 4 cut(s) 807, 993, 1477, 1877
Bse8I GATNNNNATC 1 cut(s) 1539
BseAI TCCGGA 1 cut(s) 397
BseBI CCWGG 1 cut(s) 1894
BseCI ATCGAT 1 cut(s) 87
BseGI GGATG 7 cut(s) 628, 960, 1023, 1027, 1159, 1309, 2020
BseJI GATNNNNATC 1 cut(s) 1539
BseLI CCNNNNNNNGG 4 cut(s) 69, 691, 1164, 1869
BseMI GCAATG 4 cut(s) 807, 993, 1477, 1877
BseMII CTCAG 4 cut(s) 602, 741, 1112, 1989
BseNI ACTGG 3 cut(s) 64, 1186, 1447
BseXI GCAGC 2 cut(s) 1409, 2060
BsgI GTGCAG 2 cut(s) 1304, 1824
Bsh1236I CGCG 3 cut(s) 413, 727, 915
BshFI GGCC 3 cut(s) 812, 1348, 1800
BshNI GGYRCC 2 cut(s) 29, 252
BshVI ATCGAT 1 cut(s) 87
BsiHKAI GWGCWC 1 cut(s) 979
BsiHKCI CYCGRG 1 cut(s) 1310
BsiSI CCGG 7 cut(s) 305, 398, 494, 952, 1089, 1903, 2070
BslFI GGGAC 1 cut(s) 1344
BslI CCNNNNNNNGG 4 cut(s) 69, 691, 1164, 1869
BsmFI GGGAC 1 cut(s) 1344
BsmI GAATGC 4 cut(s) 306, 430, 802, 1999
BsnI GGCC 3 cut(s) 812, 1348, 1800
BsoBI CYCGRG 1 cut(s) 1310
Bsp119I TTCGAA 1 cut(s) 446
Bsp1286I GDGCHC 1 cut(s) 979
Bsp13I TCCGGA 1 cut(s) 397
Bsp143I GATC 8 cut(s) 150, 897, 1035, 1351, 1654, 1708, 1848, 2122
BspACI CCGC 5 cut(s) 413, 661, 727, 809, 1860
BspANI GGCC 3 cut(s) 812, 1348, 1800
BspCNI CTCAG 4 cut(s) 601, 742, 1111, 1990
BspDI ATCGAT 1 cut(s) 87
BspEI TCCGGA 1 cut(s) 397
BspFNI CGCG 3 cut(s) 413, 727, 915
BspHI TCATGA 1 cut(s) 2202
BspLI GGNNCC 2 cut(s) 31, 254
BspMAI CTGCAG 1 cut(s) 2078
BspMI ACCTGC 1 cut(s) 264
BspPI GGATC 1 cut(s) 2117
BspT104I TTCGAA 1 cut(s) 446
BspT107I GGYRCC 2 cut(s) 29, 252
BsrDI GCAATG 4 cut(s) 807, 993, 1477, 1877
BsrFI RCCGGY 2 cut(s) 493, 1088
BsrI ACTGG 3 cut(s) 64, 1186, 1447
BssAI RCCGGY 2 cut(s) 493, 1088
BssMI GATC 8 cut(s) 150, 897, 1035, 1351, 1654, 1708, 1848, 2122
BssNAI GTATAC 1 cut(s) 537
BssSI CACGAG 1 cut(s) 322
Bst1107I GTATAC 1 cut(s) 537
Bst2BI CACGAG 1 cut(s) 322
Bst2UI CCWGG 1 cut(s) 1894
Bst4CI ACNGT 5 cut(s) 133, 359, 1252, 1321, 1697
Bst6I CTCTTC 3 cut(s) 467, 1599, 2139
BstAPI GCANNNNNTGC 1 cut(s) 806
BstBI TTCGAA 1 cut(s) 446
BstDEI CTNAG 6 cut(s) 8, 540, 588, 750, 1098, 1998
BstF5I GGATG 7 cut(s) 628, 960, 1023, 1027, 1159, 1309, 2020
BstFNI CGCG 3 cut(s) 413, 727, 915
BstHHI GCGC 3 cut(s) 727, 745, 917
BstKTI GATC 8 cut(s) 153, 900, 1038, 1354, 1657, 1711, 1851, 2125
BstMBI GATC 8 cut(s) 150, 897, 1035, 1351, 1654, 1708, 1848, 2122
BstMWI GCNNNNNNNGC 7 cut(s) 434, 797, 806, 912, 983, 1094, 1394
BstNI CCWGG 1 cut(s) 1894
BstNSI RCATGY 3 cut(s) 1386, 1689, 2108
BstSCI CCNGG 2 cut(s) 1892, 2068
BstSFI CTRYAG 1 cut(s) 2074
BstUI CGCG 3 cut(s) 413, 727, 915
BstV1I GCAGC 2 cut(s) 1409, 2060
BstV2I GAAGAC 2 cut(s) 1445, 2160
BstX2I RGATCY 1 cut(s) 1035
BstYI RGATCY 1 cut(s) 1035
BstZ17I GTATAC 1 cut(s) 537
Bsu15I ATCGAT 1 cut(s) 87
BsuI GTATCC 1 cut(s) 1890
BsuRI GGCC 3 cut(s) 812, 1348, 1800
BsuTUI ATCGAT 1 cut(s) 87
BtrI CACGTC 1 cut(s) 191
BtsCI GGATG 7 cut(s) 628, 960, 1023, 1027, 1159, 1309, 2020
BtsI GCAGTG 2 cut(s) 1214, 2161
BtsIMutI CAGTG 5 cut(s) 129, 1106, 1214, 1702, 2161
BveI ACCTGC 1 cut(s) 264
CciI TCATGA 1 cut(s) 2202
CfoI GCGC 3 cut(s) 727, 745, 917
Cfr10I RCCGGY 2 cut(s) 493, 1088
Cfr13I GGNCC 1 cut(s) 1347
ClaI ATCGAT 1 cut(s) 87
CseI GACGC 1 cut(s) 419
Csp6I GTAC 3 cut(s) 30, 253, 1317
CviQI GTAC 3 cut(s) 30, 253, 1317
DdeI CTNAG 6 cut(s) 8, 540, 588, 750, 1098, 1998
DpnI GATC 8 cut(s) 152, 899, 1037, 1353, 1656, 1710, 1850, 2124
DpnII GATC 8 cut(s) 150, 897, 1035, 1351, 1654, 1708, 1848, 2122
DrdI GACNNNNNNGTC 1 cut(s) 842
DseDI GACNNNNNNGTC 1 cut(s) 842
EaeI YGGCCR 1 cut(s) 1798
Eam1104I CTCTTC 3 cut(s) 467, 1599, 2139
EarI CTCTTC 3 cut(s) 467, 1599, 2139
Eco32I GATATC 3 cut(s) 993, 1537, 1575
Eco57I CTGAAG 3 cut(s) 74, 1761, 2154
Eco88I CYCGRG 1 cut(s) 1310
EcoRI GAATTC 2 cut(s) 1261, 1564
EcoRII CCWGG 1 cut(s) 1892
EcoRV GATATC 3 cut(s) 993, 1537, 1575
FalI AAGNNNNNCTT 2 cut(s) 1734, 1766
FaqI GGGAC 1 cut(s) 1344
FauNDI CATATG 1 cut(s) 160
FbaI TGATCA 1 cut(s) 897
FblI GTMKAC 2 cut(s) 536, 1788
Fnu4HI GCNGC 4 cut(s) 414, 810, 1398, 2074
FokI GGATG 7 cut(s) 635, 967, 1030, 1034, 1166, 1316, 2027
Fsp4HI GCNGC 4 cut(s) 414, 810, 1398, 2074
FspBI CTAG 4 cut(s) 375, 1703, 1763, 2136
FspI TGCGCA 1 cut(s) 744
GlaI GCGC 3 cut(s) 726, 744, 916
GluI GCNGC 4 cut(s) 414, 810, 1398, 2074
HaeIII GGCC 3 cut(s) 812, 1348, 1800
HapII CCGG 7 cut(s) 305, 398, 494, 952, 1089, 1903, 2070
HgaI GACGC 1 cut(s) 419
HhaI GCGC 3 cut(s) 727, 745, 917
Hin6I GCGC 3 cut(s) 725, 743, 915
HinP1I GCGC 3 cut(s) 725, 743, 915
HincII GTYRAC 2 cut(s) 835, 1359
HindII GTYRAC 2 cut(s) 835, 1359
HindIII AAGCTT 4 cut(s) 279, 923, 1821, 1937
HinfI GANTC 6 cut(s) 84, 875, 1648, 1906, 2028, 2206
HpaII CCGG 7 cut(s) 305, 398, 494, 952, 1089, 1903, 2070
Hpy166II GTNNAC 6 cut(s) 327, 537, 835, 1359, 1747, 1789
Hpy188I TCNGA 7 cut(s) 299, 591, 974, 1035, 1047, 1136, 2093
Hpy188III TCNNGA 9 cut(s) 398, 578, 680, 821, 1058, 1301, 1312, 1652, 2203
Hpy8I GTNNAC 6 cut(s) 327, 537, 835, 1359, 1747, 1789
HpyAV CCTTC 6 cut(s) 445, 1008, 1331, 1407, 1634, 2209
HpyCH4III ACNGT 5 cut(s) 133, 359, 1252, 1321, 1697
HpyCH4IV ACGT 1 cut(s) 190
HpyF10VI GCNNNNNNNGC 7 cut(s) 434, 797, 806, 912, 983, 1094, 1394
HpyF3I CTNAG 6 cut(s) 8, 540, 588, 750, 1098, 1998
HpySE526I ACGT 1 cut(s) 190
HspAI GCGC 3 cut(s) 725, 743, 915
Kpn2I TCCGGA 1 cut(s) 397
KpnI GGTACC 2 cut(s) 33, 256
KroI GCCGGC 1 cut(s) 1088
KroNI GCCGGC 1 cut(s) 1090
Ksp22I TGATCA 1 cut(s) 897
Kzo9I GATC 8 cut(s) 150, 897, 1035, 1351, 1654, 1708, 1848, 2122
LmnI GCTCC 2 cut(s) 974, 1886
Lsp1109I GCAGC 2 cut(s) 1409, 2060
LweI GCATC 6 cut(s) 573, 759, 945, 1051, 1144, 1294
MaeI CTAG 4 cut(s) 375, 1703, 1763, 2136
MaeII ACGT 1 cut(s) 190
MaeIII GTNAC 5 cut(s) 133, 407, 703, 1691, 2051
MalI GATC 8 cut(s) 152, 899, 1037, 1353, 1656, 1710, 1850, 2124
MboI GATC 8 cut(s) 150, 897, 1035, 1351, 1654, 1708, 1848, 2122
MflI RGATCY 1 cut(s) 1035
MhlI GDGCHC 1 cut(s) 979
MlyI GAGTC 2 cut(s) 2037, 2200
MmeI TCCRAC 5 cut(s) 401, 600, 1052, 1651, 2060
MroI TCCGGA 1 cut(s) 397
MroNI GCCGGC 1 cut(s) 1088
MseI TTAA 1 cut(s) 1728
MslI CAYNNNNRTG 2 cut(s) 264, 2180
MspA1I CMGCKG 1 cut(s) 196
MspI CCGG 7 cut(s) 305, 398, 494, 952, 1089, 1903, 2070
MspR9I CCNGG 2 cut(s) 1894, 2070
Mva1269I GAATGC 4 cut(s) 306, 430, 802, 1999
MvaI CCWGG 1 cut(s) 1894
MvnI CGCG 3 cut(s) 413, 727, 915
MwoI GCNNNNNNNGC 7 cut(s) 434, 797, 806, 912, 983, 1094, 1394
NaeI GCCGGC 1 cut(s) 1090
NciI CCSGG 1 cut(s) 2070
NdeI CATATG 1 cut(s) 160
NdeII GATC 8 cut(s) 150, 897, 1035, 1351, 1654, 1708, 1848, 2122
NgoMIV GCCGGC 1 cut(s) 1088
NlaIV GGNNCC 2 cut(s) 31, 254
NmuCI GTSAC 4 cut(s) 133, 407, 1691, 2051
NsbI TGCGCA 1 cut(s) 744
NspI RCATGY 3 cut(s) 1386, 1689, 2108
NspV TTCGAA 1 cut(s) 446
PaeI GCATGC 2 cut(s) 1689, 2108
PaeR7I CTCGAG 1 cut(s) 1310
PagI TCATGA 1 cut(s) 2202
PctI GAATGC 4 cut(s) 306, 430, 802, 1999
PdiI GCCGGC 1 cut(s) 1090
PfeI GAWTC 4 cut(s) 84, 875, 1648, 1906
PflMI CCANNNNNTGG 1 cut(s) 1869
PfoI TCCNGGA 1 cut(s) 1892
PkrI GCNGC 4 cut(s) 415, 811, 1399, 2075
PleI GAGTC 2 cut(s) 2036, 2200
PpsI GAGTC 2 cut(s) 2036, 2200
Psp6I CCWGG 1 cut(s) 1892
PspGI CCWGG 1 cut(s) 1892
PspN4I GGNNCC 2 cut(s) 31, 254
PspPI GGNCC 1 cut(s) 1347
PstI CTGCAG 1 cut(s) 2078
PsuI RGATCY 1 cut(s) 1035
PvuII CAGCTG 1 cut(s) 196
RsaI GTAC 3 cut(s) 31, 254, 1318
RsaNI GTAC 3 cut(s) 30, 253, 1317
RseI CAYNNNNRTG 2 cut(s) 264, 2180
SaqAI TTAA 1 cut(s) 1728
SatI GCNGC 4 cut(s) 414, 810, 1398, 2074
Sau3AI GATC 8 cut(s) 150, 897, 1035, 1351, 1654, 1708, 1848, 2122
Sau96I GGNCC 1 cut(s) 1347
ScaI AGTACT 1 cut(s) 1318
SchI GAGTC 2 cut(s) 2037, 2200
ScrFI CCNGG 2 cut(s) 1894, 2070
SduI GDGCHC 1 cut(s) 979
SfaNI GCATC 6 cut(s) 573, 759, 945, 1051, 1144, 1294
SfcI CTRYAG 1 cut(s) 2074
Sfr274I CTCGAG 1 cut(s) 1310
SfuI TTCGAA 1 cut(s) 446
SlaI CTCGAG 1 cut(s) 1310
SmiMI CAYNNNNRTG 2 cut(s) 264, 2180
SmlI CTYRAG 4 cut(s) 365, 926, 1191, 1310
SmoI CTYRAG 4 cut(s) 365, 926, 1191, 1310
SphI GCATGC 2 cut(s) 1689, 2108
SsiI CCGC 5 cut(s) 413, 661, 727, 809, 1860
SspI AATATT 1 cut(s) 852
SspMI CTAG 4 cut(s) 375, 1703, 1763, 2136
StyD4I CCNGG 2 cut(s) 1892, 2068
TaaI ACNGT 5 cut(s) 133, 359, 1252, 1321, 1697
TaiI ACGT 1 cut(s) 193
TaqI TCGA 7 cut(s) 82, 87, 201, 273, 446, 1227, 1311
TatI WGTACW 1 cut(s) 1316
TauI GCSGC 2 cut(s) 416, 812
TfiI GAWTC 4 cut(s) 84, 875, 1648, 1906
Tru1I TTAA 1 cut(s) 1728
Tru9I TTAA 1 cut(s) 1728
TscAI CASTG 5 cut(s) 136, 1106, 1221, 1702, 2161
TseFI GTSAC 4 cut(s) 133, 407, 1691, 2051
TseI GCWGC 2 cut(s) 1397, 2073
Tsp45I GTSAC 4 cut(s) 133, 407, 1691, 2051
TspGWI ACGGA 1 cut(s) 2072
TspRI CASTG 5 cut(s) 136, 1106, 1221, 1702, 2161
Van91I CCANNNNNTGG 1 cut(s) 1869
XapI RAATTY 6 cut(s) 502, 610, 675, 1261, 1564, 1913
XceI RCATGY 3 cut(s) 1386, 1689, 2108
XhoI CTCGAG 1 cut(s) 1310
XmiI GTMKAC 2 cut(s) 536, 1788
XspI CTAG 4 cut(s) 375, 1703, 1763, 2136
ZrmI AGTACT 1 cut(s) 1318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.