Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g39740 FvH4_6g39740 |
| malus_domestica | MD02G1074700.v1.1 MD09G1137200.v1.1 MD17G1127500.v1.1 |
| prunus_persica | Prupe.3G187700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0153851 RchiOBHm_Chr4g0395161 |
| rosa_laevigata | RLG00000009644 RLG00000009647 |
| rosa_roxburghii | Rroxscaffold_2G00094710 Rroxscaffold_5G00340030 Rroxscaffold_5G00340100 |
| rosa_rugosa | Rorug02G0442500 Rorug03G0359500.1 |
| rosa_samantha | Rh2AG506400 Rh2BG516200 Rh2BG516300 Rh2CG492000 Rh2CG492100 Rh2DG528500 Rh4AG056900 Rh4BG055900 Rh4CG061900 |
| rosa_wichuraiana | Rw2G041560 Rw4G004590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 159 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 42 |
| AgsI | TTSAA | 2 cut(s) | 128, 200 |
| AjnI | CCWGG | 1 cut(s) | 263 |
| AluBI | AGCT | 2 cut(s) | 137, 260 |
| AluI | AGCT | 2 cut(s) | 137, 260 |
| AsuHPI | GGTGA | 2 cut(s) | 28, 217 |
| BceAI | ACGGC | 1 cut(s) | 156 |
| BciT130I | CCWGG | 1 cut(s) | 265 |
| BciVI | GTATCC | 1 cut(s) | 261 |
| BfaI | CTAG | 1 cut(s) | 134 |
| BfmI | CTRYAG | 1 cut(s) | 281 |
| BfuI | GTATCC | 1 cut(s) | 261 |
| BlpI | GCTNAGC | 1 cut(s) | 167 |
| Bme1390I | CCNGG | 1 cut(s) | 265 |
| BmrFI | CCNGG | 1 cut(s) | 265 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 94, 126 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 167 |
| BpuEI | CTTGAG | 1 cut(s) | 96 |
| BsaWI | WCCGGW | 1 cut(s) | 273 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 42 |
| BseBI | CCWGG | 1 cut(s) | 265 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 42 |
| BsgI | GTGCAG | 1 cut(s) | 195 |
| BsiSI | CCGG | 1 cut(s) | 274 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 42 |
| Bsp143I | GATC | 2 cut(s) | 25, 219 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 167 |
| BssMI | GATC | 2 cut(s) | 25, 219 |
| Bst2UI | CCWGG | 1 cut(s) | 265 |
| Bst4CI | ACNGT | 1 cut(s) | 68 |
| BstC8I | GCNNGC | 2 cut(s) | 58, 151 |
| BstDEI | CTNAG | 1 cut(s) | 167 |
| BstKTI | GATC | 2 cut(s) | 28, 222 |
| BstMBI | GATC | 2 cut(s) | 25, 219 |
| BstNI | CCWGG | 1 cut(s) | 265 |
| BstNSI | RCATGY | 1 cut(s) | 60 |
| BstSCI | CCNGG | 1 cut(s) | 263 |
| BstSFI | CTRYAG | 1 cut(s) | 281 |
| BsuI | GTATCC | 1 cut(s) | 261 |
| BtsIMutI | CAGTG | 1 cut(s) | 73 |
| Cac8I | GCNNGC | 2 cut(s) | 58, 151 |
| CviAII | CATG | 3 cut(s) | 57, 106, 154 |
| CviJI | RGCY | 5 cut(s) | 73, 137, 171, 194, 260 |
| CviKI_1 | RGCY | 5 cut(s) | 73, 137, 171, 194, 260 |
| DdeI | CTNAG | 1 cut(s) | 167 |
| DpnI | GATC | 2 cut(s) | 27, 221 |
| DpnII | GATC | 2 cut(s) | 25, 219 |
| EcoRII | CCWGG | 1 cut(s) | 263 |
| FaeI | CATG | 3 cut(s) | 60, 109, 157 |
| FaiI | YATR | 6 cut(s) | 58, 107, 147, 155, 215, 283 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 105, 137 |
| FatI | CATG | 3 cut(s) | 56, 105, 153 |
| FblI | GTMKAC | 1 cut(s) | 159 |
| FspBI | CTAG | 1 cut(s) | 134 |
| HapII | CCGG | 1 cut(s) | 274 |
| Hin1II | CATG | 3 cut(s) | 60, 109, 157 |
| HincII | GTYRAC | 1 cut(s) | 118 |
| HindII | GTYRAC | 1 cut(s) | 118 |
| HinfI | GANTC | 3 cut(s) | 19, 109, 277 |
| HpaI | GTTAAC | 1 cut(s) | 118 |
| HpaII | CCGG | 1 cut(s) | 274 |
| HphI | GGTGA | 2 cut(s) | 28, 217 |
| Hpy166II | GTNNAC | 2 cut(s) | 118, 160 |
| Hpy188III | TCNNGA | 1 cut(s) | 23 |
| Hpy8I | GTNNAC | 2 cut(s) | 118, 160 |
| HpyAV | CCTTC | 1 cut(s) | 5 |
| HpyCH4III | ACNGT | 1 cut(s) | 68 |
| HpyCH4V | TGCA | 6 cut(s) | 56, 60, 153, 176, 233, 248 |
| HpyF3I | CTNAG | 1 cut(s) | 167 |
| Hsp92II | CATG | 3 cut(s) | 60, 109, 157 |
| KspAI | GTTAAC | 1 cut(s) | 118 |
| Kzo9I | GATC | 2 cut(s) | 25, 219 |
| LmnI | GCTCC | 1 cut(s) | 257 |
| LpnPI | CCDG | 5 cut(s) | 36, 59, 162, 250, 277 |
| MaeI | CTAG | 1 cut(s) | 134 |
| MaeIII | GTNAC | 1 cut(s) | 62 |
| MalI | GATC | 2 cut(s) | 27, 221 |
| MboI | GATC | 2 cut(s) | 25, 219 |
| MboII | GAAGA | 1 cut(s) | 229 |
| MluCI | AATT | 1 cut(s) | 92 |
| MlyI | GAGTC | 1 cut(s) | 103 |
| MnlI | CCTC | 4 cut(s) | 141, 174, 181, 201 |
| MseI | TTAA | 3 cut(s) | 89, 99, 117 |
| MspI | CCGG | 1 cut(s) | 274 |
| MspR9I | CCNGG | 1 cut(s) | 265 |
| MvaI | CCWGG | 1 cut(s) | 265 |
| NdeII | GATC | 2 cut(s) | 25, 219 |
| NlaIII | CATG | 3 cut(s) | 60, 109, 157 |
| NmuCI | GTSAC | 1 cut(s) | 62 |
| NspI | RCATGY | 1 cut(s) | 60 |
| PaeI | GCATGC | 1 cut(s) | 60 |
| PfeI | GAWTC | 2 cut(s) | 19, 277 |
| PfoI | TCCNGGA | 1 cut(s) | 263 |
| PleI | GAGTC | 1 cut(s) | 103 |
| PpsI | GAGTC | 1 cut(s) | 103 |
| Psp6I | CCWGG | 1 cut(s) | 263 |
| PspGI | CCWGG | 1 cut(s) | 263 |
| SaqAI | TTAA | 3 cut(s) | 89, 99, 117 |
| Sau3AI | GATC | 2 cut(s) | 25, 219 |
| SchI | GAGTC | 1 cut(s) | 103 |
| ScrFI | CCNGG | 1 cut(s) | 265 |
| SetI | ASST | 6 cut(s) | 38, 123, 133, 139, 185, 262 |
| SfcI | CTRYAG | 1 cut(s) | 281 |
| SmlI | CTYRAG | 1 cut(s) | 111 |
| SmoI | CTYRAG | 1 cut(s) | 111 |
| SphI | GCATGC | 1 cut(s) | 60 |
| Sse9I | AATT | 1 cut(s) | 92 |
| SspMI | CTAG | 1 cut(s) | 134 |
| StyD4I | CCNGG | 1 cut(s) | 263 |
| TaaI | ACNGT | 1 cut(s) | 68 |
| TasI | AATT | 1 cut(s) | 92 |
| TfiI | GAWTC | 2 cut(s) | 19, 277 |
| Tru1I | TTAA | 3 cut(s) | 89, 99, 117 |
| Tru9I | TTAA | 3 cut(s) | 89, 99, 117 |
| TscAI | CASTG | 1 cut(s) | 73 |
| TseFI | GTSAC | 1 cut(s) | 62 |
| Tsp45I | GTSAC | 1 cut(s) | 62 |
| TspDTI | ATGAA | 1 cut(s) | 230 |
| TspRI | CASTG | 1 cut(s) | 73 |
| XceI | RCATGY | 1 cut(s) | 60 |
| XmiI | GTMKAC | 1 cut(s) | 159 |
| XspI | CTAG | 1 cut(s) | 134 |