RLG00000009644

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0006945
Physical Location & Seq
Forward (+)
55817541 .. 55820266
2726 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009644

Sequence Viewer

Length: 1890 bp
ATGACGACCAGAGCAATTGGTGAAAAGGGCAGCAGCCAAGTATTCATCCAAAACCTCAAGATTACCCAGTTGGGGAAGTCAGGCCGAATCGACGAAGCAGTCACAGTTTTCTCACAAATGACTCAAAGGAACACCGTCACATACAACTCCATGATCTCCGCCTACGCCAAGAATGGTAGACTCGGCCATGCACGCCAACTATTCGATAATATGTCTCACAGAAACTTGGTTTCTTGGAACACTATGATTGCGGGGTACCTGCACAGTAATATGGTGGAGGATGCTTATGGGCTTTTTGTTCACATGCCACAAAGAGACCTTTTCTCTTGGACTTTGATGATTACTTGCTACACACGTAACGGCGAGCTTGACAGAGCCAGACAGCTGTTCGGTTTGCTTCCTGATAAGCAGGACCCGGCTTGTTGGAATGCTATGATTGCAGGGTATGTGAAGAAGAGGAGGTTTGAGGATGCGAAGAGAATGTTTGATGAAATGCCGGCGAAGAACTTAGTTTCTTGGAATTCGATGCTAGCAGGGTATACCAAGAATGGGGAGACGTGTTTGGGGGTGAAGTTTTTCGAGGAGATGCCGGAGAGGAATGTGGTTTCGTGGAATTTGATGCTGGATGGATTTGTTCAGGTTGGTGAGCTGGATAATGCTTGGCAGTTTTTTGAGAAGATTCCGGAGCCTAATGTTGTTTCGTGGGTGACAATGTTGTGTGGGTTTGCGCAAAATGGGAAGATTGCGCAGGCGGAGGATCTGTTTGAGAAGATGCCGAGTAGAAATGTGGTTGCTTGGAATGCAATGCTTGCAGCCTATGTACAAGACCACCGAATTGACAAGGCTGCTGAAATATTCAGGAATATGCCGGAGATGGATTCAGTGTCATGGACTACAATGATCAATGGGTATGTTCGCGTTGGGAAGGTTGACGAAGCAAGGCAGTTGCTCAACCGGATGCCGTACAAGAACATTGCAGCACAAACAGCAATGATATCTGGATATGCTCATAATGGAAGGATGGATGAAGCAAGTCAGATCTTCAATCAGATTGCCATGCGTGATGTTGTTTGTTGGAACACCATGATTGCAGGCTATGCTCAGTGTGGCAGAATGGTTGAAGCTCTATCTCTTTTCAGAAACATGACCAACAAGGATGTAGTTTCTTGGAATACTATGATTACTGGTTATGCTCAAGTAGGGGAGATGCACAAAGCACTTCAAATCTTTGAGGAGATGGGGGAGAAGAACATAGTTTCTTGGAATTCTCTAATTACAGGTTATGTGCAGAACGGGTTATATCTGGATGCACTGAAGAGTATTGTGATTATGGGACAGGAAGGAAAGAGGCTTGATCAGTCAACTTTTTCATGTGGTCTAAGTGCATGTGCCAATCTTGCAGCTTTTCGACTGGGAAGGCAACTTCACCAAATGGTTGTGAAGACCGGCTATCTAAGTAATTTGTTTGTCAGCAATGCCCTGATTACTATGTATGCTAAATGTGGAATGGTTGCAAATGCTAATCTTGTGTTTGAAGATATCAATCATGGCGATATTGTTTCTTGGAATTCTTTGATATCTGGGTATGCTCTAAATGGATATGGTAAAGAGGCAGTAGCACTCTTTCAAGAGATGCTAATAGAAGGGGTGAATCCAGATCAAGTGACCTTTGTTGGGGTGTTGTCTGCATGCTGTCACAGTGGGCTGGTTGATCAGGGATTAAAACTGTTTAAGAGCATGACTGAAGTTCACCTTATTGAACCTGTAGCCGAACACTATGCTTGCATGGTTGACTTGCTTGGCCGTGCAGGAAGGACGCGGAGGATCCACTGGAAACAAGTTCAGGATGTCACTGGGTCTGCCAGTGGCAGCCACAGTGAACTGTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR

Protein Analysis

630

Amino Acids

70.68

Weight (kDa)

6.92

Isoelectric Point (pI)

35.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_1 PF12854 43 - 72 3.1e-08 PPR repeat
PPR_2 PF13041 43 - 75 2.4e-08 PPR repeat family
PPR PF01535 46 - 75 3.5e-08 PPR repeat
PPR_2 PF13041 75 - 106 3.6e-06 PPR repeat family
PPR_2 PF13041 140 - 169 1.8e-06 PPR repeat family
PPR PF01535 141 - 169 2.7e-07 PPR repeat
PPR_1 PF12854 229 - 258 1e-05 PPR repeat
PPR_2 PF13041 230 - 263 2e-06 PPR repeat family
PPR_1 PF12854 292 - 320 4.7e-07 PPR repeat
PPR_2 PF13041 293 - 325 1.2e-07 PPR repeat family
PPR PF01535 295 - 324 3.5e-08 PPR repeat
PPR_2 PF13041 354 - 385 9.6e-08 PPR repeat family
PPR_1 PF12854 355 - 383 1.5e-06 PPR repeat
PPR PF01535 357 - 386 4.6e-08 PPR repeat
PPR_2 PF13041 385 - 418 3.3e-09 PPR repeat family
PPR_1 PF12854 386 - 413 8.6e-07 PPR repeat
PPR PF01535 388 - 418 5e-09 PPR repeat
PPR_2 PF13041 416 - 465 1.9e-06 PPR repeat family
PPR_2 PF13041 518 - 566 6.5e-13 PPR repeat family
PPR PF01535 520 - 550 3.1e-08 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 98
Acc16I TGCGCA 2 cut(s) 729, 747
Acc36I ACCTGC 1 cut(s) 267
Acc65I GGTACC 1 cut(s) 255
AccB1I GGYRCC 1 cut(s) 255
AccI GTMKAC 2 cut(s) 178, 539
AccII CGCG 2 cut(s) 918, 1819
AccIII TCCGGA 1 cut(s) 682
AciI CCGC 4 cut(s) 159, 251, 752, 1819
AclWI GGATC 3 cut(s) 765, 1819, 1832
AcoI YGGCCR 2 cut(s) 184, 1801
AcsI RAATTY 4 cut(s) 520, 613, 1264, 1567
AcuI CTGAAG 2 cut(s) 1334, 1764
AfaI GTAC 3 cut(s) 257, 822, 965
AfiI CCNNNNNNNGG 3 cut(s) 72, 549, 1674
AflIII ACRYGT 2 cut(s) 353, 557
AgsI TTSAA 6 cut(s) 1045, 1121, 1223, 1535, 1628, 1760
AjiI CACGTC 1 cut(s) 558
AluBI AGCT 5 cut(s) 367, 385, 649, 1124, 1403
AluI AGCT 5 cut(s) 367, 385, 649, 1124, 1403
Alw26I GTCTC 3 cut(s) 219, 309, 548
AlwI GGATC 3 cut(s) 765, 1819, 1832
Aor13HI TCCGGA 1 cut(s) 682
AoxI GGCC 3 cut(s) 82, 184, 1801
ApeKI GCWGC 7 cut(s) 30, 33, 812, 845, 977, 1400, 1869
ApoI RAATTY 4 cut(s) 520, 613, 1264, 1567
Asp700I GAANNNNTTC 1 cut(s) 575
Asp718I GGTACC 1 cut(s) 255
AspLEI GCGC 2 cut(s) 730, 748
AspS9I GGNCC 1 cut(s) 412
AsuC2I CCSGG 1 cut(s) 416
AsuHPI GGTGA 7 cut(s) 32, 580, 656, 718, 1418, 1660, 1742
AsuNHI GCTAGC 1 cut(s) 529
AvaII GGWCC 1 cut(s) 412
BamHI GGATCC 1 cut(s) 1824
BanI GGYRCC 1 cut(s) 255
BbsI GAAGAC 1 cut(s) 1448
BbvI GCAGC 7 cut(s) 42, 45, 824, 832, 989, 1412, 1881
BccI CCATC 4 cut(s) 620, 868, 1015, 1231
BceAI ACGGC 3 cut(s) 376, 946, 1788
BcgI CGANNNNNNTGC 2 cut(s) 1760, 1794
BclI TGATCA 3 cut(s) 900, 1354, 1711
BcnI CCSGG 1 cut(s) 416
BcoDI GTCTC 3 cut(s) 219, 309, 548
BfaI CTAG 1 cut(s) 530
BfmI CTRYAG 1 cut(s) 1764
BfuAI ACCTGC 1 cut(s) 267
BglII AGATCT 1 cut(s) 1038
BisI GCNGC 7 cut(s) 31, 34, 813, 846, 978, 1401, 1870
BlsI GCNGC 7 cut(s) 32, 35, 814, 847, 979, 1402, 1871
Bme1390I CCNGG 1 cut(s) 416
Bme18I GGWCC 1 cut(s) 412
BmgBI CACGTC 1 cut(s) 558
BmgT120I GGNCC 1 cut(s) 412
BmiI GGNNCC 4 cut(s) 257, 414, 687, 1826
BmrFI CCNGG 1 cut(s) 416
BmrI ACTGGG 3 cut(s) 61, 1421, 1863
BmtI GCTAGC 1 cut(s) 533
BmuI ACTGGG 3 cut(s) 61, 1421, 1863
BpiI GAAGAC 1 cut(s) 1448
BpuEI CTTGAG 2 cut(s) 41, 1179
BpuMI CCSGG 1 cut(s) 416
BsaAI YACGTR 1 cut(s) 356
BsaBI GATNNNNATC 1 cut(s) 1542
BsaI GGTCTC 1 cut(s) 309
BsaWI WCCGGW 2 cut(s) 682, 954
BsaXI ACNNNNNCTCC 2 cut(s) 746, 776
Bsc4I CCNNNNNNNGG 3 cut(s) 72, 549, 1674
Bse118I RCCGGY 2 cut(s) 496, 1445
Bse1I ACTGG 6 cut(s) 67, 1189, 1416, 1835, 1858, 1863
Bse3DI GCAATG 4 cut(s) 810, 972, 996, 1480
Bse8I GATNNNNATC 1 cut(s) 1542
BseAI TCCGGA 1 cut(s) 682
BseJI GATNNNNATC 1 cut(s) 1542
BseLI CCNNNNNNNGG 3 cut(s) 72, 549, 1674
BseMI GCAATG 4 cut(s) 810, 972, 996, 1480
BseMII CTCAG 1 cut(s) 1115
BseNI ACTGG 6 cut(s) 67, 1189, 1416, 1835, 1858, 1863
BseRI GAGGAG 3 cut(s) 472, 596, 1247
BseXI GCAGC 7 cut(s) 42, 45, 824, 832, 989, 1412, 1881
BsgI GTGCAG 3 cut(s) 245, 1307, 1827
Bsh1236I CGCG 2 cut(s) 918, 1819
BshFI GGCC 3 cut(s) 84, 186, 1803
BshNI GGYRCC 1 cut(s) 255
BsiSI CCGG 7 cut(s) 416, 497, 590, 683, 869, 955, 1446
BslFI GGGAC 1 cut(s) 1347
BslI CCNNNNNNNGG 3 cut(s) 72, 549, 1674
BsmAI GTCTC 3 cut(s) 219, 309, 548
BsmBI CGTCTC 1 cut(s) 548
BsmFI GGGAC 1 cut(s) 1347
BsmI GAATGC 2 cut(s) 433, 805
BsnI GGCC 3 cut(s) 84, 186, 1803
Bso31I GGTCTC 1 cut(s) 309
Bsp13I TCCGGA 1 cut(s) 682
Bsp1407I TGTACA 1 cut(s) 820
Bsp143I GATC 8 cut(s) 153, 757, 900, 1038, 1354, 1657, 1711, 1824
BspACI CCGC 4 cut(s) 159, 251, 752, 1819
BspANI GGCC 3 cut(s) 84, 186, 1803
BspCNI CTCAG 1 cut(s) 1114
BspEI TCCGGA 1 cut(s) 682
BspFNI CGCG 2 cut(s) 918, 1819
BspLI GGNNCC 4 cut(s) 257, 414, 687, 1826
BspMI ACCTGC 1 cut(s) 267
BspOI GCTAGC 1 cut(s) 533
BspPI GGATC 3 cut(s) 765, 1819, 1832
BspT107I GGYRCC 1 cut(s) 255
BspTNI GGTCTC 1 cut(s) 309
BsrDI GCAATG 4 cut(s) 810, 972, 996, 1480
BsrFI RCCGGY 2 cut(s) 496, 1445
BsrGI TGTACA 1 cut(s) 820
BsrI ACTGG 6 cut(s) 67, 1189, 1416, 1835, 1858, 1863
BssAI RCCGGY 2 cut(s) 496, 1445
BssMI GATC 8 cut(s) 153, 757, 900, 1038, 1354, 1657, 1711, 1824
BssNAI GTATAC 1 cut(s) 540
Bst1107I GTATAC 1 cut(s) 540
Bst4CI ACNGT 7 cut(s) 106, 136, 266, 1700, 1728, 1877, 1884
Bst6I CTCTTC 3 cut(s) 449, 470, 1310
BstAPI GCANNNNNTGC 2 cut(s) 809, 1097
BstAUI TGTACA 1 cut(s) 820
BstBAI YACGTR 1 cut(s) 356
BstC8I GCNNGC 9 cut(s) 193, 365, 498, 531, 750, 810, 1093, 1690, 1783
BstDEI CTNAG 4 cut(s) 508, 1101, 1379, 1454
BstFNI CGCG 2 cut(s) 918, 1819
BstHHI GCGC 2 cut(s) 730, 748
BstKTI GATC 8 cut(s) 156, 760, 903, 1041, 1357, 1660, 1714, 1827
BstMAI GTCTC 3 cut(s) 219, 309, 548
BstMBI GATC 8 cut(s) 153, 757, 900, 1038, 1354, 1657, 1711, 1824
BstMWI GCNNNNNNNGC 7 cut(s) 192, 437, 800, 809, 986, 1097, 1397
BstNSI RCATGY 3 cut(s) 307, 1389, 1692
BstSCI CCNGG 1 cut(s) 414
BstSFI CTRYAG 1 cut(s) 1764
BstUI CGCG 2 cut(s) 918, 1819
BstV1I GCAGC 7 cut(s) 42, 45, 824, 832, 989, 1412, 1881
BstV2I GAAGAC 1 cut(s) 1448
BstX2I RGATCY 3 cut(s) 757, 1038, 1824
BstYI RGATCY 3 cut(s) 757, 1038, 1824
BstZ17I GTATAC 1 cut(s) 540
BsuRI GGCC 3 cut(s) 84, 186, 1803
BtrI CACGTC 1 cut(s) 558
BtsIMutI CAGTG 8 cut(s) 888, 1109, 1310, 1705, 1828, 1851, 1870, 1882
BveI ACCTGC 1 cut(s) 267
Cac8I GCNNGC 9 cut(s) 193, 365, 498, 531, 750, 810, 1093, 1690, 1783
CfoI GCGC 2 cut(s) 730, 748
Cfr10I RCCGGY 2 cut(s) 496, 1445
Cfr13I GGNCC 1 cut(s) 412
CseI GACGC 1 cut(s) 1825
Csp6I GTAC 3 cut(s) 256, 821, 964
CviQI GTAC 3 cut(s) 256, 821, 964
DdeI CTNAG 4 cut(s) 508, 1101, 1379, 1454
DpnI GATC 8 cut(s) 155, 759, 902, 1040, 1356, 1659, 1713, 1826
DpnII GATC 8 cut(s) 153, 757, 900, 1038, 1354, 1657, 1711, 1824
DrdI GACNNNNNNGTC 1 cut(s) 98
DseDI GACNNNNNNGTC 1 cut(s) 98
EaeI YGGCCR 2 cut(s) 184, 1801
Eam1104I CTCTTC 3 cut(s) 449, 470, 1310
EarI CTCTTC 3 cut(s) 449, 470, 1310
EciI GGCGGA 2 cut(s) 148, 767
Eco31I GGTCTC 1 cut(s) 309
Eco32I GATATC 3 cut(s) 996, 1540, 1578
Eco47I GGWCC 1 cut(s) 412
Eco57I CTGAAG 2 cut(s) 1334, 1764
EcoO109I RGGNCCY 1 cut(s) 412
EcoRI GAATTC 3 cut(s) 520, 1264, 1567
EcoRV GATATC 3 cut(s) 996, 1540, 1578
Esp3I CGTCTC 1 cut(s) 548
FalI AAGNNNNNCTT 2 cut(s) 1737, 1769
FaqI GGGAC 1 cut(s) 1347
FauI CCCGC 1 cut(s) 244
FbaI TGATCA 3 cut(s) 900, 1354, 1711
FblI GTMKAC 2 cut(s) 178, 539
Fnu4HI GCNGC 7 cut(s) 31, 34, 813, 846, 978, 1401, 1870
Fsp4HI GCNGC 7 cut(s) 31, 34, 813, 846, 978, 1401, 1870
FspBI CTAG 1 cut(s) 530
FspI TGCGCA 2 cut(s) 729, 747
GlaI GCGC 2 cut(s) 729, 747
GluI GCNGC 7 cut(s) 31, 34, 813, 846, 978, 1401, 1870
HaeIII GGCC 3 cut(s) 84, 186, 1803
HapII CCGG 7 cut(s) 416, 497, 590, 683, 869, 955, 1446
HgaI GACGC 1 cut(s) 1825
HhaI GCGC 2 cut(s) 730, 748
Hin6I GCGC 2 cut(s) 728, 746
HinP1I GCGC 2 cut(s) 728, 746
HincII GTYRAC 3 cut(s) 931, 1362, 1792
HindII GTYRAC 3 cut(s) 931, 1362, 1792
HinfI GANTC 6 cut(s) 87, 121, 180, 679, 878, 1651
HpaII CCGG 7 cut(s) 416, 497, 590, 683, 869, 955, 1446
HphI GGTGA 7 cut(s) 32, 580, 656, 718, 1418, 1660, 1742
Hpy166II GTNNAC 8 cut(s) 179, 301, 540, 931, 1362, 1750, 1792, 1880
Hpy188I TCNGA 3 cut(s) 1038, 1050, 1139
Hpy188III TCNNGA 9 cut(s) 58, 401, 683, 859, 999, 1304, 1628, 1655, 1844
Hpy8I GTNNAC 8 cut(s) 179, 301, 540, 931, 1362, 1750, 1792, 1880
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 6 cut(s) 919, 1011, 1334, 1410, 1637, 1806
HpyCH4III ACNGT 7 cut(s) 106, 136, 266, 1700, 1728, 1877, 1884
HpyCH4IV ACGT 2 cut(s) 355, 557
HpyF10VI GCNNNNNNNGC 7 cut(s) 192, 437, 800, 809, 986, 1097, 1397
HpyF3I CTNAG 4 cut(s) 508, 1101, 1379, 1454
HpySE526I ACGT 2 cut(s) 355, 557
HspAI GCGC 2 cut(s) 728, 746
Kpn2I TCCGGA 1 cut(s) 682
KpnI GGTACC 1 cut(s) 259
KroI GCCGGC 1 cut(s) 496
KroNI GCCGGC 1 cut(s) 498
Ksp22I TGATCA 3 cut(s) 900, 1354, 1711
Kzo9I GATC 8 cut(s) 153, 757, 900, 1038, 1354, 1657, 1711, 1824
LmnI GCTCC 1 cut(s) 685
Lsp1109I GCAGC 7 cut(s) 42, 45, 824, 832, 989, 1412, 1881
MaeI CTAG 1 cut(s) 530
MaeII ACGT 2 cut(s) 355, 557
MaeIII GTNAC 7 cut(s) 100, 136, 356, 706, 1663, 1694, 1849
MalI GATC 8 cut(s) 155, 759, 902, 1040, 1356, 1659, 1713, 1826
MboI GATC 8 cut(s) 153, 757, 900, 1038, 1354, 1657, 1711, 1824
MfeI CAATTG 1 cut(s) 15
MflI RGATCY 3 cut(s) 757, 1038, 1824
MluCI AATT 8 cut(s) 15, 520, 613, 834, 1264, 1272, 1459, 1567
MlyI GAGTC 2 cut(s) 115, 174
MmeI TCCRAC 2 cut(s) 404, 1055
MroI TCCGGA 1 cut(s) 682
MroNI GCCGGC 1 cut(s) 496
MroXI GAANNNNTTC 1 cut(s) 575
MseI TTAA 2 cut(s) 1721, 1731
MspA1I CMGCKG 1 cut(s) 385
MspI CCGG 7 cut(s) 416, 497, 590, 683, 869, 955, 1446
MspR9I CCNGG 1 cut(s) 416
MunI CAATTG 1 cut(s) 15
Mva1269I GAATGC 2 cut(s) 433, 805
MvnI CGCG 2 cut(s) 918, 1819
MwoI GCNNNNNNNGC 7 cut(s) 192, 437, 800, 809, 986, 1097, 1397
NaeI GCCGGC 1 cut(s) 498
NciI CCSGG 1 cut(s) 416
NdeII GATC 8 cut(s) 153, 757, 900, 1038, 1354, 1657, 1711, 1824
NgoMIV GCCGGC 1 cut(s) 496
NheI GCTAGC 1 cut(s) 529
NlaIV GGNNCC 4 cut(s) 257, 414, 687, 1826
NmeAIII GCCGAG 2 cut(s) 162, 801
NmuCI GTSAC 6 cut(s) 100, 136, 706, 1663, 1694, 1849
NsbI TGCGCA 2 cut(s) 729, 747
NspI RCATGY 3 cut(s) 307, 1389, 1692
PaeI GCATGC 1 cut(s) 1692
PctI GAATGC 2 cut(s) 433, 805
PdiI GCCGGC 1 cut(s) 498
PdmI GAANNNNTTC 1 cut(s) 575
PfeI GAWTC 4 cut(s) 87, 679, 878, 1651
PkrI GCNGC 7 cut(s) 32, 35, 814, 847, 979, 1402, 1871
PleI GAGTC 2 cut(s) 115, 174
PpsI GAGTC 2 cut(s) 115, 174
Ppu21I YACGTR 1 cut(s) 356
PpuMI RGGWCCY 1 cut(s) 412
Psp5II RGGWCCY 1 cut(s) 412
PspN4I GGNNCC 4 cut(s) 257, 414, 687, 1826
PspPI GGNCC 1 cut(s) 412
PspPPI RGGWCCY 1 cut(s) 412
PsuI RGATCY 3 cut(s) 757, 1038, 1824
PvuII CAGCTG 1 cut(s) 385
RsaI GTAC 3 cut(s) 257, 822, 965
RsaNI GTAC 3 cut(s) 256, 821, 964
SaqAI TTAA 2 cut(s) 1721, 1731
SatI GCNGC 7 cut(s) 31, 34, 813, 846, 978, 1401, 1870
Sau3AI GATC 8 cut(s) 153, 757, 900, 1038, 1354, 1657, 1711, 1824
Sau96I GGNCC 1 cut(s) 412
SchI GAGTC 2 cut(s) 115, 174
ScrFI CCNGG 1 cut(s) 416
SfcI CTRYAG 1 cut(s) 1764
SinI GGWCC 1 cut(s) 412
SmlI CTYRAG 2 cut(s) 56, 1194
SmoI CTYRAG 2 cut(s) 56, 1194
SphI GCATGC 1 cut(s) 1692
Sse9I AATT 8 cut(s) 15, 520, 613, 834, 1264, 1272, 1459, 1567
SsiI CCGC 4 cut(s) 159, 251, 752, 1819
SspI AATATT 1 cut(s) 855
SspMI CTAG 1 cut(s) 530
StyD4I CCNGG 1 cut(s) 414
TaaI ACNGT 7 cut(s) 106, 136, 266, 1700, 1728, 1877, 1884
TaiI ACGT 2 cut(s) 358, 560
TaqI TCGA 5 cut(s) 90, 204, 524, 579, 1408
TasI AATT 8 cut(s) 15, 520, 613, 834, 1264, 1272, 1459, 1567
TatI WGTACW 1 cut(s) 820
TfiI GAWTC 4 cut(s) 87, 679, 878, 1651
Tru1I TTAA 2 cut(s) 1721, 1731
Tru9I TTAA 2 cut(s) 1721, 1731
TscAI CASTG 8 cut(s) 888, 1109, 1317, 1705, 1835, 1858, 1870, 1882
TseFI GTSAC 6 cut(s) 100, 136, 706, 1663, 1694, 1849
TseI GCWGC 7 cut(s) 30, 33, 812, 845, 977, 1400, 1869
Tsp45I GTSAC 6 cut(s) 100, 136, 706, 1663, 1694, 1849
TspDTI ATGAA 4 cut(s) 34, 504, 1041, 1359
TspRI CASTG 8 cut(s) 888, 1109, 1317, 1705, 1835, 1858, 1870, 1882
VpaK11BI GGWCC 1 cut(s) 412
XapI RAATTY 4 cut(s) 520, 613, 1264, 1567
XceI RCATGY 3 cut(s) 307, 1389, 1692
XmiI GTMKAC 2 cut(s) 178, 539
XmnI GAANNNNTTC 1 cut(s) 575
XspI CTAG 1 cut(s) 530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.