Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g39740 FvH4_6g39740 |
| malus_domestica | MD02G1074700.v1.1 MD09G1137200.v1.1 MD17G1127500.v1.1 |
| prunus_persica | Prupe.3G187700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0153851 RchiOBHm_Chr4g0395161 |
| rosa_laevigata | RLG00000009644 RLG00000009647 |
| rosa_roxburghii | Rroxscaffold_2G00094710 Rroxscaffold_5G00340030 Rroxscaffold_5G00340100 |
| rosa_rugosa | Rorug02G0442500 Rorug03G0359500.1 |
| rosa_samantha | Rh2AG506400 Rh2BG516200 Rh2BG516300 Rh2CG492000 Rh2CG492100 Rh2DG528500 Rh4AG056900 Rh4BG055900 Rh4CG061900 |
| rosa_wichuraiana | Rw2G041560 Rw4G004590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 88 |
| AflII | CTTAAG | 1 cut(s) | 137 |
| AgsI | TTSAA | 1 cut(s) | 47 |
| AluBI | AGCT | 1 cut(s) | 227 |
| AluI | AGCT | 1 cut(s) | 227 |
| AoxI | GGCC | 1 cut(s) | 173 |
| ApeKI | GCWGC | 1 cut(s) | 224 |
| ApoI | RAATTY | 1 cut(s) | 88 |
| AsuHPI | GGTGA | 1 cut(s) | 242 |
| BbsI | GAAGAC | 1 cut(s) | 272 |
| BbvI | GCAGC | 1 cut(s) | 236 |
| BccI | CCATC | 2 cut(s) | 25, 55 |
| BceAI | ACGGC | 1 cut(s) | 257 |
| BclI | TGATCA | 2 cut(s) | 150, 178 |
| BfrI | CTTAAG | 1 cut(s) | 137 |
| BisI | GCNGC | 1 cut(s) | 225 |
| BlsI | GCNGC | 1 cut(s) | 226 |
| BmsI | GCATC | 1 cut(s) | 121 |
| BpiI | GAAGAC | 1 cut(s) | 272 |
| BsaJI | CCNNGG | 1 cut(s) | 83 |
| Bse1I | ACTGG | 2 cut(s) | 13, 274 |
| Bse3DI | GCAATG | 1 cut(s) | 304 |
| BseDI | CCNNGG | 1 cut(s) | 83 |
| BseGI | GGATG | 1 cut(s) | 136 |
| BseMI | GCAATG | 1 cut(s) | 304 |
| BseNI | ACTGG | 2 cut(s) | 13, 274 |
| BseRI | GAGGAG | 1 cut(s) | 71 |
| BseXI | GCAGC | 1 cut(s) | 236 |
| BsgI | GTGCAG | 1 cut(s) | 131 |
| BshFI | GGCC | 1 cut(s) | 175 |
| BslFI | GGGAC | 2 cut(s) | 171, 252 |
| BsmFI | GGGAC | 2 cut(s) | 171, 252 |
| BsnI | GGCC | 1 cut(s) | 175 |
| Bsp143I | GATC | 2 cut(s) | 150, 178 |
| BspANI | GGCC | 1 cut(s) | 175 |
| BspTI | CTTAAG | 1 cut(s) | 137 |
| BsrDI | GCAATG | 1 cut(s) | 304 |
| BsrI | ACTGG | 2 cut(s) | 13, 274 |
| BssECI | CCNNGG | 1 cut(s) | 83 |
| BssMI | GATC | 2 cut(s) | 150, 178 |
| BssT1I | CCWWGG | 1 cut(s) | 83 |
| Bst4CI | ACNGT | 1 cut(s) | 333 |
| BstAFI | CTTAAG | 1 cut(s) | 137 |
| BstDEI | CTNAG | 1 cut(s) | 203 |
| BstF5I | GGATG | 1 cut(s) | 136 |
| BstKTI | GATC | 2 cut(s) | 153, 181 |
| BstMBI | GATC | 2 cut(s) | 150, 178 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 221 |
| BstNSI | RCATGY | 1 cut(s) | 213 |
| BstV1I | GCAGC | 1 cut(s) | 236 |
| BstV2I | GAAGAC | 1 cut(s) | 272 |
| BsuRI | GGCC | 1 cut(s) | 175 |
| BtsCI | GGATG | 1 cut(s) | 136 |
| CviAII | CATG | 3 cut(s) | 154, 195, 210 |
| CviJI | RGCY | 4 cut(s) | 41, 175, 227, 273 |
| CviKI_1 | RGCY | 4 cut(s) | 41, 175, 227, 273 |
| DdeI | CTNAG | 1 cut(s) | 203 |
| DpnI | GATC | 2 cut(s) | 152, 180 |
| DpnII | GATC | 2 cut(s) | 150, 178 |
| Eco130I | CCWWGG | 1 cut(s) | 83 |
| Eco147I | AGGCCT | 1 cut(s) | 175 |
| EcoRI | GAATTC | 1 cut(s) | 88 |
| EcoT14I | CCWWGG | 1 cut(s) | 83 |
| ErhI | CCWWGG | 1 cut(s) | 83 |
| FaeI | CATG | 3 cut(s) | 157, 198, 213 |
| FaiI | YATR | 8 cut(s) | 15, 77, 108, 124, 155, 196, 211, 318 |
| FaqI | GGGAC | 2 cut(s) | 171, 252 |
| FatI | CATG | 3 cut(s) | 153, 194, 209 |
| FbaI | TGATCA | 2 cut(s) | 150, 178 |
| Fnu4HI | GCNGC | 1 cut(s) | 225 |
| FokI | GGATG | 1 cut(s) | 143 |
| Fsp4HI | GCNGC | 1 cut(s) | 225 |
| GluI | GCNGC | 1 cut(s) | 225 |
| HaeIII | GGCC | 1 cut(s) | 175 |
| Hin1II | CATG | 3 cut(s) | 157, 198, 213 |
| HincII | GTYRAC | 1 cut(s) | 186 |
| HindII | GTYRAC | 1 cut(s) | 186 |
| HphI | GGTGA | 1 cut(s) | 242 |
| Hpy166II | GTNNAC | 1 cut(s) | 186 |
| Hpy188III | TCNNGA | 1 cut(s) | 128 |
| Hpy8I | GTNNAC | 1 cut(s) | 186 |
| HpyAV | CCTTC | 1 cut(s) | 53 |
| HpyCH4III | ACNGT | 1 cut(s) | 333 |
| HpyCH4V | TGCA | 4 cut(s) | 112, 134, 209, 224 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 221 |
| HpyF3I | CTNAG | 1 cut(s) | 203 |
| Hsp92II | CATG | 3 cut(s) | 157, 198, 213 |
| Ksp22I | TGATCA | 2 cut(s) | 150, 178 |
| Kzo9I | GATC | 2 cut(s) | 150, 178 |
| LpnPI | CCDG | 6 cut(s) | 87, 113, 146, 189, 255, 317 |
| Lsp1109I | GCAGC | 1 cut(s) | 236 |
| LweI | GCATC | 1 cut(s) | 121 |
| MalI | GATC | 2 cut(s) | 152, 180 |
| MboI | GATC | 2 cut(s) | 150, 178 |
| MboII | GAAGA | 1 cut(s) | 277 |
| MluCI | AATT | 2 cut(s) | 88, 96 |
| MnlI | CCTC | 2 cut(s) | 49, 165 |
| MseI | TTAA | 1 cut(s) | 138 |
| MspCI | CTTAAG | 1 cut(s) | 137 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 221 |
| NdeII | GATC | 2 cut(s) | 150, 178 |
| NlaIII | CATG | 3 cut(s) | 157, 198, 213 |
| NspI | RCATGY | 1 cut(s) | 213 |
| PceI | AGGCCT | 1 cut(s) | 175 |
| PkrI | GCNGC | 1 cut(s) | 226 |
| SaqAI | TTAA | 1 cut(s) | 138 |
| SatI | GCNGC | 1 cut(s) | 225 |
| Sau3AI | GATC | 2 cut(s) | 150, 178 |
| SetI | ASST | 2 cut(s) | 106, 229 |
| SfaNI | GCATC | 1 cut(s) | 121 |
| SmlI | CTYRAG | 2 cut(s) | 18, 137 |
| SmoI | CTYRAG | 2 cut(s) | 18, 137 |
| Sse9I | AATT | 2 cut(s) | 88, 96 |
| SseBI | AGGCCT | 1 cut(s) | 175 |
| StuI | AGGCCT | 1 cut(s) | 175 |
| StyI | CCWWGG | 1 cut(s) | 83 |
| TaaI | ACNGT | 1 cut(s) | 333 |
| TasI | AATT | 2 cut(s) | 88, 96 |
| Tru1I | TTAA | 1 cut(s) | 138 |
| Tru9I | TTAA | 1 cut(s) | 138 |
| TseI | GCWGC | 1 cut(s) | 224 |
| TspDTI | ATGAA | 1 cut(s) | 183 |
| Vha464I | CTTAAG | 1 cut(s) | 137 |
| XapI | RAATTY | 1 cut(s) | 88 |
| XceI | RCATGY | 1 cut(s) | 213 |