Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0006945

Physical Location & Seq

Genomic Coordinates Reverse (-)

56819786 .. 56825386

Gene Structure 5601 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0442500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGTTTATTAGGTTTTTCCAATTTCTCATTCTAACCAGGGATAGTAAGCTAATGGCAACTGCAACTATGGCCACCGCAGCCGGTGCAGCTGCTCTCTTGTATTACACATTGAACCGCAAGTTACAGACCGGCGGTGATGATGACGAAGGAGGTGGTGGTGGCTTGCCCGATCAGGCGCCTTTGGGAATCGACCGCGTTTCCAATAGGTTAATTCAGGCCCCTGCTACCTGGTTGGAAACTATTTCCACCTTGTCTGAGACTCTTAGGTTTACTTACTCTGAGACTCTCGGCAAGTGGCCTATAGGAGACTTGGCTTTCGGAATCAGCTTCCTTCTCAAGAGGCAGGGAAACTTACTTGTTGATGGTGTATTTGGTGGAGAAGAAAGTCAACAGCTAAAGGGGCCTGAAATAGTCGAGGAACTTAAGTACCTCTTAAACTTATTAACACTGTGTTGGCACTTTTCCAAGAAACCTTTTCCTTTATTTTTAGAGGAGACAGGTTATTCTGAAGAGAATGTTCTTCTTCAGGAACCCAAAGCAGGAATCTTGAAGCCTGCTTTTACAATTCTGGTTGATCATGACCAAAAATGCTTTCTCTTGTTGATTCGTGGAACCCATAGTATCAAGGACACTTTAACAGCGGCAACAGGGGCTGTTGTACCTTTCCATCACAGTGTTGTGCATGAGGGAGGGGTCAGTGATCTAGTTTTGGGTTATGCACATTGTGGAATGGTTGCAGCTGCAAGGTGGATTGCAACGCTTGCAAAACCGCGTCTTCTAGAAGCGCTTGACCAATATCCTGGCTATGAACTTAAGATTGTAGGGCATTCTTTGGGTGGAGGCACTGCAGCTCTTTTAACATATATATTGCGTGAGCAGAAAGAACTGGCAACAACCACTTGTGTGACATTTGCTCCAGCTGCCTGTATGACATGGGAATTGGCAGAATCAGGCGCTAAGTTTATTACTTCCGTTGTTAATGGTGCTGACTTAGTGCCCACCTTCTCTGCTGCATCAGTGGATGATTTACGTGCTGAGGTAACTGCATCTGCTTGGCTAAATGATCTGAGAAATCAGATAGAGCAGACAAGAATCCTTAGCACTGTCTATCGTTCTGCTTCAGCTTTGGGTTCACGCCTTCCATCCATTGCCACTGCTAAAGCAACGGTTGCAGGGGCAGGGGCGATTCTGCGCCCTGTTTCCAGTGGTACACAGGTTGTTATGAGAAGAGCTCAGAGCATGGCAGCATGGGCACGTCCTAACCTTCGCTTATCATCATGGAACTGCATGGCTCCTCGTCACAGAACCTCAGCTGTCTGTTCAAATTCAAATGATGAGGCAAGTTCTGCAGAGTCCTCATGTGGCCACACTGAGACTTCTGAGCCTCTCCTTACGTCTCCTAAGACAAGGATGAGCTCAAGTGTCATTGAAAGCCTTGACCTTCCTGTATCTACATCTGTAAGAATGGAGTGGACTTCGGAGATTGGATGCTCTATTTCTGATAGTGGGATGCGTCCAGATACTGATGACGATGTCGGTAATGAAGGTGACCATGATAGACATGAAGATCGCATGACTGAAGCTGAATTGTGGCAACAACTTGAGCATGAACTTTATGATAGAACAGAAGGTGAGGAGGCAGATGTAGCAAAAGAAATAAGGGAAGAGGAAGAAGCGGCAAGAAGGGAAGAAGTAAACGAAGCGTCAATAAGGGAAGAAGAAGAAGCGGCAATTGCAGAGGTAAGCAATGGCCAGCCGGAGAGCTCTTTTCCAGGAATGAAGGAAGCGCACAGATTTTTTCCTGCAGGCAAAATCATGCATATTGTTACCCTTCATAGTGGTGCTGCTAATTGTGATAGTGGCAGCCCTAGCTCCAGTGGCTCGGATGAGCAGCAGCAGCCAGAAGAGACTAGGATTGGTATTTTCCTCACTCCAAGATCTCTGTACAGTAAGCTGAGGTTGTCGCAAACAATGATCAGTGATCACTTCATGCCAGTCTACAGAAGACGGATTGAGAAGCTGATAAAAGAATTTGAGAAAGAAGCAGCTTCCATTGGAGAGGTAGTATTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

690

Amino Acids

75.42

Weight (kDa)

5.1

Isoelectric Point (pI)

49.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lipase3_N	PF03893	65 - 144	1.3e-18	Lipase 3 N-terminal region
Lipase_3	PF01764	200 - 337	4.5e-29	Lipase (class 3)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006945)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g39740 FvH4_6g39740
malus_domestica	MD02G1074700.v1.1 MD09G1137200.v1.1 MD17G1127500.v1.1
prunus_persica	Prupe.3G187700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0153851 RchiOBHm_Chr4g0395161
rosa_laevigata	RLG00000009644 RLG00000009647
rosa_roxburghii	Rroxscaffold_2G00094710 Rroxscaffold_5G00340030 Rroxscaffold_5G00340100
rosa_rugosa	Rorug02G0442500 Rorug03G0359500.1
rosa_samantha	Rh2AG506400 Rh2BG516200 Rh2BG516300 Rh2CG492000 Rh2CG492100 Rh2DG528500 Rh4AG056900 Rh4BG055900 Rh4CG061900
rosa_wichuraiana	Rw2G041560 Rw4G004590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	175
AccI	GTMKAC	1 cut(s)	1998
AccII	CGCG	2 cut(s)	195, 772
AciI	CCGC	8 cut(s)	75, 115, 132, 193, 641, 770, 1676, 1727
AcoI	YGGCCR	3 cut(s)	69, 1363, 1750
AcsI	RAATTY	2 cut(s)	1324, 2030
AcuI	CTGAAG	4 cut(s)	509, 528, 1104, 1599
AcyI	GRCGYC	1 cut(s)	176
AdeI	CACNNNGTG	1 cut(s)	725
AfaI	GTAC	4 cut(s)	428, 660, 1210, 1946
AfeI	AGCGCT	1 cut(s)	786
AfiI	CCNNNNNNNGG	1 cut(s)	539
AflII	CTTAAG	2 cut(s)	422, 812
AgsI	TTSAA	5 cut(s)	112, 550, 1323, 1329, 1430
AjiI	CACGTC	1 cut(s)	1256
AjnI	CCWGG	4 cut(s)	35, 227, 799, 1771
AjuI	GAANNNNNNNTTGG	4 cut(s)	12, 44, 576, 608
AleI	CACNNNNGTG	1 cut(s)	902
Alw21I	GWGCWC	3 cut(s)	1234, 1418, 1766
Alw26I	GTCTC	7 cut(s)	251, 275, 300, 488, 1367, 1401, 1901
AlwNI	CAGNNNCTG	2 cut(s)	653, 1523
Aor51HI	AGCGCT	1 cut(s)	786
AoxI	GGCC	6 cut(s)	69, 216, 296, 401, 1363, 1750
ApoI	RAATTY	2 cut(s)	1324, 2030
ArsI	GACNNNNNNTTYG	2 cut(s)	299, 331
AspLEI	GCGC	5 cut(s)	178, 787, 956, 1194, 1789
AspS9I	GGNCC	2 cut(s)	217, 401
AsuHPI	GGTGA	3 cut(s)	146, 1559, 1643
BaeGI	GKGCMC	2 cut(s)	999, 1255
BaeI	ACNNNNGTAYC	4 cut(s)	410, 443, 1200, 1233
BalI	TGGCCA	3 cut(s)	71, 1365, 1752
BanI	GGYRCC	1 cut(s)	175
BanII	GRGCYC	3 cut(s)	1234, 1418, 1766
BbsI	GAAGAC	2 cut(s)	767, 2011
Bbv12I	GWGCWC	3 cut(s)	1234, 1418, 1766
BbvCI	CCTCAGC	3 cut(s)	1035, 1309, 1955
BccI	CCATC	3 cut(s)	356, 675, 1150
BciT130I	CCWGG	4 cut(s)	37, 229, 801, 1773
BclI	TGATCA	3 cut(s)	574, 1974, 1981
BcoDI	GTCTC	7 cut(s)	251, 275, 300, 488, 1367, 1401, 1901
BfaI	CTAG	4 cut(s)	704, 779, 1869, 1911
BfmI	CTRYAG	5 cut(s)	300, 846, 1347, 1803, 1999
BfoI	RGCGCY	3 cut(s)	179, 788, 957
BfrI	CTTAAG	2 cut(s)	422, 812
BglII	AGATCT	1 cut(s)	1937
Bme1390I	CCNGG	4 cut(s)	37, 229, 801, 1773
BmgBI	CACGTC	1 cut(s)	1256
BmgT120I	GGNCC	2 cut(s)	217, 401
BmiI	GGNNCC	6 cut(s)	177, 219, 402, 531, 613, 1293
BmrFI	CCNGG	4 cut(s)	37, 229, 801, 1773
BmsI	GCATC	4 cut(s)	1022, 1055, 1478, 1500
BpiI	GAAGAC	2 cut(s)	767, 2011
BplI	GAGNNNNNCTC	2 cut(s)	1216, 1248
BpmI	CTGGAG	2 cut(s)	900, 1858
Bpu10I	CCTNAGC	4 cut(s)	1035, 1097, 1309, 1955
BpuEI	CTTGAG	3 cut(s)	320, 1402, 1622
BsaAI	YACGTR	1 cut(s)	1031
BsaHI	GRCGYC	1 cut(s)	176
BsaJI	CCNNGG	1 cut(s)	36
BsaXI	ACNNNNNCTCC	3 cut(s)	898, 928, 2049
Bsc4I	CCNNNNNNNGG	1 cut(s)	539
Bse118I	RCCGGY	2 cut(s)	80, 128
Bse1I	ACTGG	4 cut(s)	891, 1203, 1875, 1994
Bse3DI	GCAATG	2 cut(s)	1146, 1753
BseBI	CCWGG	4 cut(s)	37, 229, 801, 1773
BseDI	CCNNGG	1 cut(s)	36
BseGI	GGATG	6 cut(s)	1027, 1142, 1416, 1493, 1515, 1891
BseLI	CCNNNNNNNGG	1 cut(s)	539
BseMI	GCAATG	2 cut(s)	1146, 1753
BseMII	CTCAG	9 cut(s)	246, 270, 1026, 1058, 1247, 1323, 1362, 1371, 1946
BseNI	ACTGG	4 cut(s)	891, 1203, 1875, 1994
BseRI	GAGGAG	3 cut(s)	506, 1284, 1649
BseSI	GKGCMC	2 cut(s)	999, 1255
BsgI	GTGCAG	1 cut(s)	105
Bsh1236I	CGCG	2 cut(s)	195, 772
Bsh1285I	CGRYCG	1 cut(s)	193
BshFI	GGCC	6 cut(s)	71, 218, 298, 403, 1365, 1752
BshNI	GGYRCC	1 cut(s)	175
BsiEI	CGRYCG	1 cut(s)	193
BsiHKAI	GWGCWC	3 cut(s)	1234, 1418, 1766
BsiSI	CCGG	3 cut(s)	81, 129, 1757
BslI	CCNNNNNNNGG	1 cut(s)	539
BsmAI	GTCTC	7 cut(s)	251, 275, 300, 488, 1367, 1401, 1901
BsmBI	CGTCTC	1 cut(s)	1401
BsmI	GAATGC	1 cut(s)	826
BsnI	GGCC	6 cut(s)	71, 218, 298, 403, 1365, 1752
Bsp1286I	GDGCHC	5 cut(s)	999, 1234, 1255, 1418, 1766
Bsp1407I	TGTACA	1 cut(s)	1944
Bsp143I	GATC	8 cut(s)	169, 574, 700, 1063, 1567, 1937, 1974, 1981
BspACI	CCGC	8 cut(s)	75, 115, 132, 193, 641, 770, 1676, 1727
BspANI	GGCC	6 cut(s)	71, 218, 298, 403, 1365, 1752
BspCNI	CTCAG	9 cut(s)	247, 271, 1027, 1059, 1246, 1322, 1363, 1372, 1947
BspFNI	CGCG	2 cut(s)	195, 772
BspHI	TCATGA	1 cut(s)	577
BspLI	GGNNCC	6 cut(s)	177, 219, 402, 531, 613, 1293
BspMAI	CTGCAG	3 cut(s)	850, 1351, 1807
BspQI	GCTCTTC	1 cut(s)	1222
BspT107I	GGYRCC	1 cut(s)	175
BspTI	CTTAAG	2 cut(s)	422, 812
BsrDI	GCAATG	2 cut(s)	1146, 1753
BsrFI	RCCGGY	2 cut(s)	80, 128
BsrGI	TGTACA	1 cut(s)	1944
BsrI	ACTGG	4 cut(s)	891, 1203, 1875, 1994
BssAI	RCCGGY	2 cut(s)	80, 128
BssECI	CCNNGG	1 cut(s)	36
BssMI	GATC	8 cut(s)	169, 574, 700, 1063, 1567, 1937, 1974, 1981
BssNI	GRCGYC	1 cut(s)	176
Bst2UI	CCWGG	4 cut(s)	37, 229, 801, 1773
Bst4CI	ACNGT	5 cut(s)	450, 674, 1105, 1168, 1949
Bst6I	CTCTTC	4 cut(s)	504, 1222, 1659, 1899
BstACI	GRCGYC	1 cut(s)	176
BstAFI	CTTAAG	2 cut(s)	422, 812
BstAPI	GCANNNNNTGC	4 cut(s)	83, 761, 1169, 1346
BstAUI	TGTACA	1 cut(s)	1944
BstBAI	YACGTR	1 cut(s)	1031
BstC8I	GCNNGC	5 cut(s)	164, 555, 762, 1754, 1807
BstEII	GGTNACC	1 cut(s)	1547
BstF5I	GGATG	6 cut(s)	1027, 1142, 1416, 1493, 1515, 1891
BstFNI	CGCG	2 cut(s)	195, 772
BstH2I	RGCGCY	3 cut(s)	179, 788, 957
BstHHI	GCGC	5 cut(s)	178, 787, 956, 1194, 1789
BstKTI	GATC	8 cut(s)	172, 577, 703, 1066, 1570, 1940, 1977, 1984
BstMAI	GTCTC	7 cut(s)	251, 275, 300, 488, 1367, 1401, 1901
BstMBI	GATC	8 cut(s)	169, 574, 700, 1063, 1567, 1937, 1974, 1981
BstMCI	CGRYCG	1 cut(s)	193
BstNI	CCWGG	4 cut(s)	37, 229, 801, 1773
BstPI	GGTNACC	1 cut(s)	1547
BstSCI	CCNGG	4 cut(s)	35, 227, 799, 1771
BstSFI	CTRYAG	5 cut(s)	300, 846, 1347, 1803, 1999
BstSLI	GKGCMC	2 cut(s)	999, 1255
BstUI	CGCG	2 cut(s)	195, 772
BstV2I	GAAGAC	2 cut(s)	767, 2011
BstX2I	RGATCY	1 cut(s)	1937
BstXI	CCANNNNNNTGG	1 cut(s)	800
BstYI	RGATCY	1 cut(s)	1937
BsuRI	GGCC	6 cut(s)	71, 218, 298, 403, 1365, 1752
BtrI	CACGTC	1 cut(s)	1256
BtsCI	GGATG	6 cut(s)	1027, 1142, 1416, 1493, 1515, 1891
BtsI	GCAGTG	2 cut(s)	843, 1152
Cac8I	GCNNGC	5 cut(s)	164, 555, 762, 1754, 1807
CaiI	CAGNNNCTG	2 cut(s)	653, 1523
CciI	TCATGA	1 cut(s)	577
CfoI	GCGC	5 cut(s)	178, 787, 956, 1194, 1789
Cfr10I	RCCGGY	2 cut(s)	80, 128
Cfr13I	GGNCC	2 cut(s)	217, 401
CseI	GACGC	3 cut(s)	761, 1502, 1692
CsiI	ACCWGGT	1 cut(s)	227
Csp6I	GTAC	4 cut(s)	427, 659, 1209, 1945
CviQI	GTAC	4 cut(s)	427, 659, 1209, 1945
DinI	GGCGCC	1 cut(s)	177
DpnI	GATC	8 cut(s)	171, 576, 702, 1065, 1569, 1939, 1976, 1983
DpnII	GATC	8 cut(s)	169, 574, 700, 1063, 1567, 1937, 1974, 1981
DraIII	CACNNNGTG	1 cut(s)	725
EaeI	YGGCCR	3 cut(s)	69, 1363, 1750
Eam1104I	CTCTTC	4 cut(s)	504, 1222, 1659, 1899
EarI	CTCTTC	4 cut(s)	504, 1222, 1659, 1899
Ecl136II	GAGCTC	3 cut(s)	1232, 1416, 1764
Eco24I	GRGCYC	3 cut(s)	1234, 1418, 1766
Eco47III	AGCGCT	1 cut(s)	786
Eco53kI	GAGCTC	3 cut(s)	1232, 1416, 1764
Eco57I	CTGAAG	4 cut(s)	509, 528, 1104, 1599
Eco91I	GGTNACC	1 cut(s)	1547
EcoICRI	GAGCTC	3 cut(s)	1232, 1416, 1764
EcoO109I	RGGNCCY	2 cut(s)	217, 401
EcoO65I	GGTNACC	1 cut(s)	1547
EcoRII	CCWGG	4 cut(s)	35, 227, 799, 1771
EcoT22I	ATGCAT	1 cut(s)	1821
EcoT38I	GRGCYC	3 cut(s)	1234, 1418, 1766
EgeI	GGCGCC	1 cut(s)	177
EheI	GGCGCC	1 cut(s)	177
Esp3I	CGTCTC	1 cut(s)	1401
FalI	AAGNNNNNCTT	2 cut(s)	416, 448
FbaI	TGATCA	3 cut(s)	574, 1974, 1981
FblI	GTMKAC	1 cut(s)	1998
FokI	GGATG	6 cut(s)	1034, 1129, 1423, 1500, 1522, 1898
FriOI	GRGCYC	3 cut(s)	1234, 1418, 1766
FspBI	CTAG	4 cut(s)	704, 779, 1869, 1911
GlaI	GCGC	5 cut(s)	177, 786, 955, 1193, 1788
GsuI	CTGGAG	2 cut(s)	900, 1858
HaeII	RGCGCY	3 cut(s)	179, 788, 957
HaeIII	GGCC	6 cut(s)	71, 218, 298, 403, 1365, 1752
HapII	CCGG	3 cut(s)	81, 129, 1757
HgaI	GACGC	3 cut(s)	761, 1502, 1692
HhaI	GCGC	5 cut(s)	178, 787, 956, 1194, 1789
Hin1I	GRCGYC	1 cut(s)	176
Hin6I	GCGC	5 cut(s)	176, 785, 954, 1192, 1787
HinP1I	GCGC	5 cut(s)	176, 785, 954, 1192, 1787
HincII	GTYRAC	1 cut(s)	389
HindII	GTYRAC	1 cut(s)	389
HpaII	CCGG	3 cut(s)	81, 129, 1757
HphI	GGTGA	3 cut(s)	146, 1559, 1643
Hpy166II	GTNNAC	7 cut(s)	270, 389, 1133, 1211, 1473, 1696, 1999
Hpy188III	TCNNGA	6 cut(s)	337, 527, 547, 578, 779, 1517
Hpy8I	GTNNAC	7 cut(s)	270, 389, 1133, 1211, 1473, 1696, 1999
HpyCH4III	ACNGT	5 cut(s)	450, 674, 1105, 1168, 1949
HpyCH4IV	ACGT	3 cut(s)	1030, 1255, 1394
HpySE526I	ACGT	3 cut(s)	1030, 1255, 1394
Hsp92I	GRCGYC	1 cut(s)	176
HspAI	GCGC	5 cut(s)	176, 785, 954, 1192, 1787
KasI	GGCGCC	1 cut(s)	175
Ksp22I	TGATCA	3 cut(s)	574, 1974, 1981
Kzo9I	GATC	8 cut(s)	169, 574, 700, 1063, 1567, 1937, 1974, 1981
LguI	GCTCTTC	1 cut(s)	1222
LmnI	GCTCC	3 cut(s)	919, 1297, 1877
LweI	GCATC	4 cut(s)	1022, 1055, 1478, 1500
MabI	ACCWGGT	1 cut(s)	227
MaeI	CTAG	4 cut(s)	704, 779, 1869, 1911
MaeII	ACGT	3 cut(s)	1030, 1255, 1394
MaeIII	GTNAC	6 cut(s)	120, 904, 1039, 1298, 1547, 1825
MalI	GATC	8 cut(s)	171, 576, 702, 1065, 1569, 1939, 1976, 1983
MboI	GATC	8 cut(s)	169, 574, 700, 1063, 1567, 1937, 1974, 1981
MfeI	CAATTG	1 cut(s)	1731
MflI	RGATCY	1 cut(s)	1937
MhlI	GDGCHC	5 cut(s)	999, 1234, 1255, 1418, 1766
MlsI	TGGCCA	3 cut(s)	71, 1365, 1752
MluCI	AATT	9 cut(s)	20, 210, 564, 938, 1324, 1586, 1731, 1849, 2030
MluNI	TGGCCA	3 cut(s)	71, 1365, 1752
Mly113I	GGCGCC	1 cut(s)	176
MlyI	GAGTC	3 cut(s)	253, 277, 1361
MmeI	TCCRAC	1 cut(s)	213
Mox20I	TGGCCA	3 cut(s)	71, 1365, 1752
Mph1103I	ATGCAT	1 cut(s)	1821
MscI	TGGCCA	3 cut(s)	71, 1365, 1752
MseI	TTAA	8 cut(s)	209, 423, 434, 443, 635, 813, 857, 978
MslI	CAYNNNNRTG	3 cut(s)	672, 902, 1839
Msp20I	TGGCCA	3 cut(s)	71, 1365, 1752
MspA1I	CMGCKG	5 cut(s)	89, 641, 740, 920, 1313
MspCI	CTTAAG	2 cut(s)	422, 812
MspI	CCGG	3 cut(s)	81, 129, 1757
MspR9I	CCNGG	4 cut(s)	37, 229, 801, 1773
MunI	CAATTG	1 cut(s)	1731
Mva1269I	GAATGC	1 cut(s)	826
MvaI	CCWGG	4 cut(s)	37, 229, 801, 1773
MvnI	CGCG	2 cut(s)	195, 772
NarI	GGCGCC	1 cut(s)	176
NdeII	GATC	8 cut(s)	169, 574, 700, 1063, 1567, 1937, 1974, 1981
NlaIV	GGNNCC	6 cut(s)	177, 219, 402, 531, 613, 1293
NmeAIII	GCCGAG	1 cut(s)	267
NmuCI	GTSAC	3 cut(s)	904, 1298, 1547
NsiI	ATGCAT	1 cut(s)	1821
OliI	CACNNNNGTG	1 cut(s)	902
PagI	TCATGA	1 cut(s)	577
PciSI	GCTCTTC	1 cut(s)	1222
PctI	GAATGC	1 cut(s)	826
PfeI	GAWTC	7 cut(s)	186, 321, 543, 604, 947, 1092, 1186
PflFI	GACNNNGTC	1 cut(s)	1532
PfoI	TCCNGGA	1 cut(s)	1771
PleI	GAGTC	3 cut(s)	253, 277, 1360
PluTI	GGCGCC	1 cut(s)	179
PpsI	GAGTC	3 cut(s)	253, 277, 1360
Ppu21I	YACGTR	1 cut(s)	1031
Psp124BI	GAGCTC	3 cut(s)	1234, 1418, 1766
Psp6I	CCWGG	4 cut(s)	35, 227, 799, 1771
PspEI	GGTNACC	1 cut(s)	1547
PspGI	CCWGG	4 cut(s)	35, 227, 799, 1771
PspN4I	GGNNCC	6 cut(s)	177, 219, 402, 531, 613, 1293
PspPI	GGNCC	2 cut(s)	217, 401
PstI	CTGCAG	3 cut(s)	850, 1351, 1807
PstNI	CAGNNNCTG	2 cut(s)	653, 1523
PsuI	RGATCY	1 cut(s)	1937
PsyI	GACNNNGTC	1 cut(s)	1532
PvuII	CAGCTG	4 cut(s)	89, 740, 920, 1313
RsaI	GTAC	4 cut(s)	428, 660, 1210, 1946
RsaNI	GTAC	4 cut(s)	427, 659, 1209, 1945
RseI	CAYNNNNRTG	3 cut(s)	672, 902, 1839
SacI	GAGCTC	3 cut(s)	1234, 1418, 1766
SapI	GCTCTTC	1 cut(s)	1222
SaqAI	TTAA	8 cut(s)	209, 423, 434, 443, 635, 813, 857, 978
Sau3AI	GATC	8 cut(s)	169, 574, 700, 1063, 1567, 1937, 1974, 1981
Sau96I	GGNCC	2 cut(s)	217, 401
SbfI	CCTGCAGG	1 cut(s)	1807
SchI	GAGTC	3 cut(s)	253, 277, 1361
ScrFI	CCNGG	4 cut(s)	37, 229, 801, 1773
SdaI	CCTGCAGG	1 cut(s)	1807
SduI	GDGCHC	5 cut(s)	999, 1234, 1255, 1418, 1766
SexAI	ACCWGGT	1 cut(s)	227
SfaNI	GCATC	4 cut(s)	1022, 1055, 1478, 1500
SfcI	CTRYAG	5 cut(s)	300, 846, 1347, 1803, 1999
SfoI	GGCGCC	1 cut(s)	177
SmiMI	CAYNNNNRTG	3 cut(s)	672, 902, 1839
SmlI	CTYRAG	5 cut(s)	335, 422, 812, 1417, 1601
SmoI	CTYRAG	5 cut(s)	335, 422, 812, 1417, 1601
Sse8387I	CCTGCAGG	1 cut(s)	1807
Sse9I	AATT	9 cut(s)	20, 210, 564, 938, 1324, 1586, 1731, 1849, 2030
SsiI	CCGC	8 cut(s)	75, 115, 132, 193, 641, 770, 1676, 1727
SspDI	GGCGCC	1 cut(s)	175
SspMI	CTAG	4 cut(s)	704, 779, 1869, 1911
SstI	GAGCTC	3 cut(s)	1234, 1418, 1766
StyD4I	CCNGG	4 cut(s)	35, 227, 799, 1771
TaaI	ACNGT	5 cut(s)	450, 674, 1105, 1168, 1949
TaiI	ACGT	3 cut(s)	1033, 1258, 1397
TaqI	TCGA	2 cut(s)	189, 414
TasI	AATT	9 cut(s)	20, 210, 564, 938, 1324, 1586, 1731, 1849, 2030
TatI	WGTACW	1 cut(s)	1944
TauI	GCSGC	3 cut(s)	644, 1679, 1730
TfiI	GAWTC	7 cut(s)	186, 321, 543, 604, 947, 1092, 1186
Tru1I	TTAA	8 cut(s)	209, 423, 434, 443, 635, 813, 857, 978
Tru9I	TTAA	8 cut(s)	209, 423, 434, 443, 635, 813, 857, 978
TseFI	GTSAC	3 cut(s)	904, 1298, 1547
Tsp45I	GTSAC	3 cut(s)	904, 1298, 1547
TspDTI	ATGAA	7 cut(s)	822, 1557, 1578, 1623, 1793, 1823, 1978
TspGWI	ACGGA	2 cut(s)	961, 2023
Tth111I	GACNNNGTC	1 cut(s)	1532
Vha464I	CTTAAG	2 cut(s)	422, 812
XapI	RAATTY	2 cut(s)	1324, 2030
XbaI	TCTAGA	1 cut(s)	778
XmiI	GTMKAC	1 cut(s)	1998
XspI	CTAG	4 cut(s)	704, 779, 1869, 1911
Zsp2I	ATGCAT	1 cut(s)	1821

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.