Rw2G041560

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0006945
Physical Location & Seq
Forward (+)
67598624 .. 67600815
2192 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G041560.1

Sequence Viewer

Length: 1995 bp
ATGATGTCTGCCTATGCTAAAAATGGTAGGGTTGGTAATGCACGCCAAATGTTTGATACAATGTCTCACAGAAACTTGGTGTCTTGGAACACTATGATTGCAGGGTACGTGCATAATAATGAGGTCGAGAGAGCTTATGGGCTTTTTGTGAGAATGCCGGAAAGAGATCTCTTCTCATGGACTCTGATGATAACTTGCTGCACGCGGAATGGTGAGCTTGAGAGAGCCAGAGGACTGTTCAATTTGCTTCCGGATAAGGGCGATGCGGCCTGTTGGAATGCCATGATTGCAGGGTATGCGAAGAAGGGGAGGTCTGATGAAATGCGGGCGAAAATTTTGAATAGGGAAATGTGTTTCGGGTTGAGGTTTTTTGCGGAGATGCCGGCGAGGAACGTGGTTTTGTGGAATTTGATGTTGGATGGGTTTGTGCAGGTTGGTGATTTGGATTCTGCTAGGCAGTTTTTTGAGAAGATTCCAGACCCGAATATTGTTTCGTGGGTTACAATGTTGTGTGGGTTTGCGCAAAATGGGAAGATTGCGCAGGCAGGGGACCTCTTTGAGCAGACGCCAAGTAGAAATGTGGTTGCTTGGAATGCAATGCTTGCAGGCTATGTTCAAGACCACCAAATTGACAAGGCTGTGAAAATTTTTAGGGATATGCCAGAGACGGATTCTGTATCATGGACTACAATGATCAATGGGTATGTTAGAGTTGGCAAGCTTGACGAAGCAAGGGAATTGCTAAACCGGATGCCATACAAGAACATTGCAGCACAAACAGCAATGATATCTGGATGTGCTCATAATGGAAGGATGGATGAAGCAAGTCAGATCTTCAATCAGATTGCTATTCGTGATGGTGTTTGTTGGAACACAATGGTTTCAGGCTATGCCAAGTGTGGCAGAGGGGATGTAGTTTCTTGGAATACTATGATAACTGGTTATGCTCAAGTAGGGGAGATGGATAAAGCCCTTCAAATCTTTGAGGAGATGGGCGACAAGAACATAGTTTCTTGGAATCCTCTAATTACAGGTTATGTGCAGAACGGGTTATATCTGGATGCACTTAAGAGTATTGTGATCTTGGGACAGGAAAGAAAGAGGCCTGATCAGTCAACTTTTTCATGTGGTCTAAGTGCATATGCTAATCTTGCAGATTTACAAGTGGGACGGCAACTTCACCATTTGGTTGTGAAGACTGGCTGTCTAAATGATTTCGTTCGAAGATATCAATCATGGGGATATTATTCCAAGATATCTGGGTATGCTCTAAACGCGTATGGTAAAGAGGCAGTAGAGCTCTTTGAAGAGATGCTAATAGAAGGGGTGAATCCAGATCAACTGACCTTTGTTGGGGTGTTGTCTGCATGCAGTCACAGTGGGCTGGTTGATTGGGGATTAAAATTGTTTAAGAGCATGACTCAAGTTAACCTTATTGAACCTCTAGCTGAACACTATGCTTGCATGGTAGACTTGCTTGGCCATGCAGGGAGGAAGATCAAGGCAACTGCAAGAATGTGGGGTGCATTACTTGGAGCTTCCAGGATACACCGGAATCTAAAGTTTGCCAATTATGGTATGAAGAAACTTTTAGAACTCAAACCTGATAAAACTTCAAATTTTGTGCTATTGTCAAACATGAATGCTGAGGCAGGCAGATGGGATGAGGTTGAAATAGTCAGCATTTGGATTGAAGTCAGGAATCATGCTATTCTCTTTGATGATCCAGTGCAACCCAGAACAGCAGAGATATGCAGTGTACTGAACTCCCTAGCCAGAGAGATGAAAAACACTAGTTCCTTTGATGAATGTTTTACCACCTACAGATATGATAAATGGTACGCCTTTTCACTTTTCTTAAACTGCTACATTTTAGCACTTTGTAGATTATCAGACTCTTTTGTTAGTGCATATACAAATTATTGGGGTCCTCTTGGTACAGAAGTCGTACATTTCCATGGACATGGCAGGAAAGAAAAAAGATGTTCCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR

Protein Analysis

664

Amino Acids

75.14

Weight (kDa)

8.19

Isoelectric Point (pI)

31.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 25 - 55 4.4e-06 PPR repeat family
PPR PF01535 27 - 56 1.3e-06 PPR repeat
PPR_2 PF13041 192 - 221 9.3e-07 PPR repeat family
PPR_2 PF13041 224 - 256 2.7e-07 PPR repeat family
PPR_1 PF12854 224 - 251 1e-06 PPR repeat
PPR PF01535 226 - 255 1.6e-08 PPR repeat
PPR_2 PF13041 304 - 336 2.8e-09 PPR repeat family
PPR_1 PF12854 304 - 331 2.8e-07 PPR repeat
PPR PF01535 306 - 336 3.6e-09 PPR repeat
E_motif PF20431 517 - 560 1.6e-08 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 522, 540
Acc36I ACCTGC 1 cut(s) 421
AccI GTMKAC 1 cut(s) 1470
AccII CGCG 2 cut(s) 205, 1277
AccIII TCCGGA 1 cut(s) 250
AciI CCGC 4 cut(s) 205, 266, 325, 374
AclWI GGATC 1 cut(s) 1718
AcoI YGGCCR 1 cut(s) 1480
AcsI RAATTY 4 cut(s) 333, 406, 645, 1618
AcyI GRCGYC 1 cut(s) 566
AfaI GTAC 5 cut(s) 107, 1761, 1841, 1939, 1950
AfiI CCNNNNNNNGG 2 cut(s) 257, 1353
AflII CTTAAG 1 cut(s) 1067
AflIII ACRYGT 1 cut(s) 1275
AhdI GACNNNNNGTC 1 cut(s) 1203
AhlI ACTAGT 1 cut(s) 1793
AjnI CCWGG 1 cut(s) 1541
AjuI GAANNNNNNNTTGG 2 cut(s) 398, 430
AluBI AGCT 6 cut(s) 134, 217, 721, 1300, 1448, 1538
AluI AGCT 6 cut(s) 134, 217, 721, 1300, 1448, 1538
Alw21I GWGCWC 2 cut(s) 802, 1302
Alw26I GTCTC 2 cut(s) 69, 659
AlwI GGATC 1 cut(s) 1718
Aor13HI TCCGGA 1 cut(s) 250
AoxI GGCC 3 cut(s) 267, 1103, 1480
ApeKI GCWGC 2 cut(s) 198, 770
ApoI RAATTY 4 cut(s) 333, 406, 645, 1618
AspLEI GCGC 2 cut(s) 523, 541
AspS9I GGNCC 2 cut(s) 550, 1928
AsuHPI GGTGA 4 cut(s) 224, 449, 1172, 1339
AsuII TTCGAA 1 cut(s) 1222
AvaII GGWCC 2 cut(s) 550, 1928
BaeI ACNNNNGTAYC 2 cut(s) 1929, 1962
BalI TGGCCA 1 cut(s) 1482
BanII GRGCYC 1 cut(s) 1302
BbsI GAAGAC 1 cut(s) 1202
Bbv12I GWGCWC 2 cut(s) 802, 1302
BbvCI CCTCAGC 1 cut(s) 1647
BbvI GCAGC 2 cut(s) 185, 782
BccI CCATC 6 cut(s) 413, 808, 851, 955, 985, 1653
BceAI ACGGC 1 cut(s) 1187
BciT130I CCWGG 1 cut(s) 1543
BciVI GTATCC 1 cut(s) 1539
BclI TGATCA 2 cut(s) 693, 1108
BcoDI GTCTC 2 cut(s) 69, 659
BcuI ACTAGT 1 cut(s) 1793
BfaI CTAG 4 cut(s) 453, 1445, 1772, 1794
BfmI CTRYAG 1 cut(s) 1822
BfrI CTTAAG 1 cut(s) 1067
BfuAI ACCTGC 1 cut(s) 421
BfuI GTATCC 1 cut(s) 1539
BglII AGATCT 2 cut(s) 166, 831
BisI GCNGC 3 cut(s) 199, 267, 771
BlsI GCNGC 3 cut(s) 200, 268, 772
Bme1390I CCNGG 1 cut(s) 1543
Bme18I GGWCC 2 cut(s) 550, 1928
BmeRI GACNNNNNGTC 1 cut(s) 1203
BmgT120I GGNCC 2 cut(s) 550, 1928
BmiI GGNNCC 2 cut(s) 551, 1929
BmrFI CCNGG 1 cut(s) 1543
BmsI GCATC 5 cut(s) 253, 369, 741, 1051, 1302
BpiI GAAGAC 1 cut(s) 1202
BplI GAGNNNNNCTC 2 cut(s) 1405, 1437
Bpu10I CCTNAGC 1 cut(s) 1647
Bpu14I TTCGAA 1 cut(s) 1222
BpuEI CTTGAG 3 cut(s) 239, 933, 1407
BsaAI YACGTR 1 cut(s) 109
BsaBI GATNNNNATC 1 cut(s) 1231
BsaHI GRCGYC 1 cut(s) 566
BsaJI CCNNGG 1 cut(s) 1957
BsaWI WCCGGW 3 cut(s) 250, 747, 1551
Bsc4I CCNNNNNNNGG 2 cut(s) 257, 1353
Bse118I RCCGGY 1 cut(s) 382
Bse1I ACTGG 3 cut(s) 943, 1204, 1727
Bse3DI GCAATG 3 cut(s) 603, 765, 789
Bse8I GATNNNNATC 1 cut(s) 1231
BseAI TCCGGA 1 cut(s) 250
BseBI CCWGG 1 cut(s) 1543
BseDI CCNNGG 1 cut(s) 1957
BseGI GGATG 8 cut(s) 424, 756, 800, 819, 823, 916, 1066, 1669
BseJI GATNNNNATC 1 cut(s) 1231
BseLI CCNNNNNNNGG 2 cut(s) 257, 1353
BseMI GCAATG 3 cut(s) 603, 765, 789
BseMII CTCAG 1 cut(s) 1638
BseNI ACTGG 3 cut(s) 943, 1204, 1727
BseRI GAGGAG 1 cut(s) 1001
BseXI GCAGC 2 cut(s) 185, 782
BsgI GTGCAG 3 cut(s) 184, 449, 1061
Bsh1236I CGCG 2 cut(s) 205, 1277
BshFI GGCC 3 cut(s) 269, 1105, 1482
BsiHKAI GWGCWC 2 cut(s) 802, 1302
BsiSI CCGG 5 cut(s) 158, 251, 383, 748, 1552
BslFI GGGAC 3 cut(s) 563, 1101, 1182
BslI CCNNNNNNNGG 2 cut(s) 257, 1353
BsmAI GTCTC 2 cut(s) 69, 659
BsmBI CGTCTC 1 cut(s) 659
BsmFI GGGAC 3 cut(s) 563, 1101, 1182
BsmI GAATGC 4 cut(s) 159, 283, 598, 1648
BsnI GGCC 3 cut(s) 269, 1105, 1482
Bsp119I TTCGAA 1 cut(s) 1222
Bsp1286I GDGCHC 2 cut(s) 802, 1302
Bsp13I TCCGGA 1 cut(s) 250
Bsp143I GATC 8 cut(s) 166, 693, 831, 1080, 1108, 1336, 1497, 1723
Bsp19I CCATGG 1 cut(s) 1957
BspACI CCGC 4 cut(s) 205, 266, 325, 374
BspANI GGCC 3 cut(s) 269, 1105, 1482
BspCNI CTCAG 1 cut(s) 1639
BspEI TCCGGA 1 cut(s) 250
BspFNI CGCG 2 cut(s) 205, 1277
BspLI GGNNCC 2 cut(s) 551, 1929
BspMI ACCTGC 1 cut(s) 421
BspPI GGATC 1 cut(s) 1718
BspT104I TTCGAA 1 cut(s) 1222
BspTI CTTAAG 1 cut(s) 1067
BsrDI GCAATG 3 cut(s) 603, 765, 789
BsrFI RCCGGY 1 cut(s) 382
BsrI ACTGG 3 cut(s) 943, 1204, 1727
BssAI RCCGGY 1 cut(s) 382
BssECI CCNNGG 1 cut(s) 1957
BssMI GATC 8 cut(s) 166, 693, 831, 1080, 1108, 1336, 1497, 1723
BssNI GRCGYC 1 cut(s) 566
BssT1I CCWWGG 1 cut(s) 1957
Bst2UI CCWGG 1 cut(s) 1543
Bst4CI ACNGT 2 cut(s) 237, 1379
Bst6I CTCTTC 2 cut(s) 176, 1302
BstACI GRCGYC 1 cut(s) 566
BstAFI CTTAAG 1 cut(s) 1067
BstAPI GCANNNNNTGC 2 cut(s) 296, 602
BstBAI YACGTR 1 cut(s) 109
BstBI TTCGAA 1 cut(s) 1222
BstDEI CTNAG 2 cut(s) 1133, 1647
BstDSI CCRYGG 1 cut(s) 1957
BstF5I GGATG 8 cut(s) 424, 756, 800, 819, 823, 916, 1066, 1669
BstFNI CGCG 2 cut(s) 205, 1277
BstHHI GCGC 2 cut(s) 523, 541
BstKTI GATC 8 cut(s) 169, 696, 834, 1083, 1111, 1339, 1500, 1726
BstMAI GTCTC 2 cut(s) 69, 659
BstMBI GATC 8 cut(s) 166, 693, 831, 1080, 1108, 1336, 1497, 1723
BstMWI GCNNNNNNNGC 7 cut(s) 287, 296, 593, 602, 779, 1151, 1274
BstNI CCWGG 1 cut(s) 1543
BstNSI RCATGY 1 cut(s) 1371
BstSCI CCNGG 1 cut(s) 1541
BstSFI CTRYAG 1 cut(s) 1822
BstUI CGCG 2 cut(s) 205, 1277
BstV1I GCAGC 2 cut(s) 185, 782
BstV2I GAAGAC 1 cut(s) 1202
BstX2I RGATCY 2 cut(s) 166, 831
BstXI CCANNNNNNTGG 1 cut(s) 1964
BstYI RGATCY 2 cut(s) 166, 831
BsuI GTATCC 1 cut(s) 1539
BsuRI GGCC 3 cut(s) 269, 1105, 1482
BtgI CCRYGG 1 cut(s) 1957
BtgZI GCGATG 1 cut(s) 276
BtsCI GGATG 8 cut(s) 424, 756, 800, 819, 823, 916, 1066, 1669
BtsI GCAGTG 1 cut(s) 1762
BtsIMutI CAGTG 3 cut(s) 1384, 1734, 1762
BveI ACCTGC 1 cut(s) 421
CfoI GCGC 2 cut(s) 523, 541
Cfr10I RCCGGY 1 cut(s) 382
Cfr13I GGNCC 2 cut(s) 550, 1928
CseI GACGC 1 cut(s) 574
Csp6I GTAC 5 cut(s) 106, 1760, 1840, 1938, 1949
CviQI GTAC 5 cut(s) 106, 1760, 1840, 1938, 1949
DdeI CTNAG 2 cut(s) 1133, 1647
DpnI GATC 8 cut(s) 168, 695, 833, 1082, 1110, 1338, 1499, 1725
DpnII GATC 8 cut(s) 166, 693, 831, 1080, 1108, 1336, 1497, 1723
DriI GACNNNNNGTC 1 cut(s) 1203
EaeI YGGCCR 1 cut(s) 1480
Eam1104I CTCTTC 2 cut(s) 176, 1302
Eam1105I GACNNNNNGTC 1 cut(s) 1203
EarI CTCTTC 2 cut(s) 176, 1302
Ecl136II GAGCTC 1 cut(s) 1300
Eco130I CCWWGG 1 cut(s) 1957
Eco147I AGGCCT 1 cut(s) 1105
Eco24I GRGCYC 1 cut(s) 1302
Eco32I GATATC 3 cut(s) 789, 1229, 1257
Eco47I GGWCC 2 cut(s) 550, 1928
Eco53kI GAGCTC 1 cut(s) 1300
EcoICRI GAGCTC 1 cut(s) 1300
EcoO109I RGGNCCY 2 cut(s) 550, 1928
EcoRII CCWGG 1 cut(s) 1541
EcoRV GATATC 3 cut(s) 789, 1229, 1257
EcoT14I CCWWGG 1 cut(s) 1957
EcoT38I GRGCYC 1 cut(s) 1302
ErhI CCWWGG 1 cut(s) 1957
Esp3I CGTCTC 1 cut(s) 659
FalI AAGNNNNNCTT 2 cut(s) 1416, 1448
FaqI GGGAC 3 cut(s) 563, 1101, 1182
FauI CCCGC 1 cut(s) 318
FauNDI CATATG 1 cut(s) 1141
FbaI TGATCA 2 cut(s) 693, 1108
FblI GTMKAC 1 cut(s) 1470
Fnu4HI GCNGC 3 cut(s) 199, 267, 771
FokI GGATG 8 cut(s) 431, 763, 807, 826, 830, 923, 1073, 1676
FriOI GRGCYC 1 cut(s) 1302
Fsp4HI GCNGC 3 cut(s) 199, 267, 771
FspBI CTAG 4 cut(s) 453, 1445, 1772, 1794
FspI TGCGCA 2 cut(s) 522, 540
GlaI GCGC 2 cut(s) 522, 540
GluI GCNGC 3 cut(s) 199, 267, 771
HaeIII GGCC 3 cut(s) 269, 1105, 1482
HapII CCGG 5 cut(s) 158, 251, 383, 748, 1552
HgaI GACGC 1 cut(s) 574
HhaI GCGC 2 cut(s) 523, 541
Hin1I GRCGYC 1 cut(s) 566
Hin6I GCGC 2 cut(s) 521, 539
HinP1I GCGC 2 cut(s) 521, 539
HincII GTYRAC 2 cut(s) 1116, 1429
HindII GTYRAC 2 cut(s) 1116, 1429
HindIII AAGCTT 1 cut(s) 719
HpaI GTTAAC 1 cut(s) 1429
HpaII CCGG 5 cut(s) 158, 251, 383, 748, 1552
HphI GGTGA 4 cut(s) 224, 449, 1172, 1339
Hpy166II GTNNAC 4 cut(s) 1116, 1429, 1471, 1760
Hpy188I TCNGA 5 cut(s) 186, 316, 831, 843, 1894
Hpy188III TCNNGA 9 cut(s) 127, 251, 476, 617, 792, 854, 1058, 1334, 1699
Hpy8I GTNNAC 4 cut(s) 1116, 1429, 1471, 1760
HpyAV CCTTC 4 cut(s) 298, 804, 983, 1316
HpyCH4III ACNGT 2 cut(s) 237, 1379
HpyCH4IV ACGT 2 cut(s) 108, 393
HpyF10VI GCNNNNNNNGC 7 cut(s) 287, 296, 593, 602, 779, 1151, 1274
HpyF3I CTNAG 2 cut(s) 1133, 1647
HpySE526I ACGT 2 cut(s) 108, 393
Hsp92I GRCGYC 1 cut(s) 566
HspAI GCGC 2 cut(s) 521, 539
Kpn2I TCCGGA 1 cut(s) 250
KroI GCCGGC 1 cut(s) 382
KroNI GCCGGC 1 cut(s) 384
Ksp22I TGATCA 2 cut(s) 693, 1108
KspAI GTTAAC 1 cut(s) 1429
Kzo9I GATC 8 cut(s) 166, 693, 831, 1080, 1108, 1336, 1497, 1723
LmnI GCTCC 1 cut(s) 1535
Lsp1109I GCAGC 2 cut(s) 185, 782
LweI GCATC 5 cut(s) 253, 369, 741, 1051, 1302
MaeI CTAG 4 cut(s) 453, 1445, 1772, 1794
MaeII ACGT 2 cut(s) 108, 393
MaeIII GTNAC 2 cut(s) 499, 1373
MalI GATC 8 cut(s) 168, 695, 833, 1082, 1110, 1338, 1499, 1725
MboI GATC 8 cut(s) 166, 693, 831, 1080, 1108, 1336, 1497, 1723
MflI RGATCY 2 cut(s) 166, 831
MhlI GDGCHC 2 cut(s) 802, 1302
MlsI TGGCCA 1 cut(s) 1482
MluI ACGCGT 1 cut(s) 1275
MluNI TGGCCA 1 cut(s) 1482
MlyI GAGTC 3 cut(s) 175, 1414, 1889
MmeI TCCRAC 3 cut(s) 254, 396, 848
Mox20I TGGCCA 1 cut(s) 1482
MroI TCCGGA 1 cut(s) 250
MroNI GCCGGC 1 cut(s) 382
MscI TGGCCA 1 cut(s) 1482
MseI TTAA 5 cut(s) 1068, 1400, 1410, 1428, 1859
MslI CAYNNNNRTG 3 cut(s) 117, 1956, 1962
Msp20I TGGCCA 1 cut(s) 1482
MspCI CTTAAG 1 cut(s) 1067
MspI CCGG 5 cut(s) 158, 251, 383, 748, 1552
MspR9I CCNGG 1 cut(s) 1543
Mva1269I GAATGC 4 cut(s) 159, 283, 598, 1648
MvaI CCWGG 1 cut(s) 1543
MvnI CGCG 2 cut(s) 205, 1277
MwoI GCNNNNNNNGC 7 cut(s) 287, 296, 593, 602, 779, 1151, 1274
NaeI GCCGGC 1 cut(s) 384
NcoI CCATGG 1 cut(s) 1957
NdeI CATATG 1 cut(s) 1141
NdeII GATC 8 cut(s) 166, 693, 831, 1080, 1108, 1336, 1497, 1723
NgoMIV GCCGGC 1 cut(s) 382
NlaIV GGNNCC 2 cut(s) 551, 1929
NmuCI GTSAC 1 cut(s) 1373
NsbI TGCGCA 2 cut(s) 522, 540
NspI RCATGY 1 cut(s) 1371
NspV TTCGAA 1 cut(s) 1222
PaeI GCATGC 1 cut(s) 1371
PceI AGGCCT 1 cut(s) 1105
PctI GAATGC 4 cut(s) 159, 283, 598, 1648
PdiI GCCGGC 1 cut(s) 384
PfeI GAWTC 7 cut(s) 446, 472, 671, 1018, 1330, 1555, 1702
PfoI TCCNGGA 1 cut(s) 1541
PkrI GCNGC 3 cut(s) 200, 268, 772
PleI GAGTC 3 cut(s) 175, 1414, 1889
PpsI GAGTC 3 cut(s) 175, 1414, 1889
Ppu21I YACGTR 1 cut(s) 109
PpuMI RGGWCCY 2 cut(s) 550, 1928
Psp124BI GAGCTC 1 cut(s) 1302
Psp5II RGGWCCY 2 cut(s) 550, 1928
Psp6I CCWGG 1 cut(s) 1541
PspGI CCWGG 1 cut(s) 1541
PspN4I GGNNCC 2 cut(s) 551, 1929
PspPI GGNCC 2 cut(s) 550, 1928
PspPPI RGGWCCY 2 cut(s) 550, 1928
PsuI RGATCY 2 cut(s) 166, 831
RsaI GTAC 5 cut(s) 107, 1761, 1841, 1939, 1950
RsaNI GTAC 5 cut(s) 106, 1760, 1840, 1938, 1949
RseI CAYNNNNRTG 3 cut(s) 117, 1956, 1962
SacI GAGCTC 1 cut(s) 1302
SaqAI TTAA 5 cut(s) 1068, 1400, 1410, 1428, 1859
SatI GCNGC 3 cut(s) 199, 267, 771
Sau3AI GATC 8 cut(s) 166, 693, 831, 1080, 1108, 1336, 1497, 1723
Sau96I GGNCC 2 cut(s) 550, 1928
SchI GAGTC 3 cut(s) 175, 1414, 1889
ScrFI CCNGG 1 cut(s) 1543
SduI GDGCHC 2 cut(s) 802, 1302
SfaNI GCATC 5 cut(s) 253, 369, 741, 1051, 1302
SfcI CTRYAG 1 cut(s) 1822
SfuI TTCGAA 1 cut(s) 1222
SinI GGWCC 2 cut(s) 550, 1928
SmiMI CAYNNNNRTG 3 cut(s) 117, 1956, 1962
SmlI CTYRAG 4 cut(s) 218, 948, 1067, 1422
SmoI CTYRAG 4 cut(s) 218, 948, 1067, 1422
SpeI ACTAGT 1 cut(s) 1793
SphI GCATGC 1 cut(s) 1371
SseBI AGGCCT 1 cut(s) 1105
SsiI CCGC 4 cut(s) 205, 266, 325, 374
SspI AATATT 1 cut(s) 487
SspMI CTAG 4 cut(s) 453, 1445, 1772, 1794
SstI GAGCTC 1 cut(s) 1302
StuI AGGCCT 1 cut(s) 1105
StyD4I CCNGG 1 cut(s) 1541
StyI CCWWGG 1 cut(s) 1957
TaaI ACNGT 2 cut(s) 237, 1379
TaiI ACGT 2 cut(s) 111, 396
TaqI TCGA 2 cut(s) 126, 1222
TatI WGTACW 1 cut(s) 1759
TauI GCSGC 1 cut(s) 269
TfiI GAWTC 7 cut(s) 446, 472, 671, 1018, 1330, 1555, 1702
Tru1I TTAA 5 cut(s) 1068, 1400, 1410, 1428, 1859
Tru9I TTAA 5 cut(s) 1068, 1400, 1410, 1428, 1859
TscAI CASTG 3 cut(s) 1384, 1734, 1762
TseFI GTSAC 1 cut(s) 1373
TseI GCWGC 2 cut(s) 198, 770
Tsp45I GTSAC 1 cut(s) 1373
TspDTI ATGAA 7 cut(s) 333, 834, 1113, 1595, 1655, 1799, 1821
TspGWI ACGGA 1 cut(s) 683
TspRI CASTG 3 cut(s) 1384, 1734, 1762
Vha464I CTTAAG 1 cut(s) 1067
VpaK11BI GGWCC 2 cut(s) 550, 1928
XapI RAATTY 4 cut(s) 333, 406, 645, 1618
XceI RCATGY 1 cut(s) 1371
XmiI GTMKAC 1 cut(s) 1470
XspI CTAG 4 cut(s) 453, 1445, 1772, 1794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.