Rroxscaffold_5G00340100

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0006945
Physical Location & Seq
Reverse (-)
8441492 .. 8447171
5680 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00340100.1

Sequence Viewer

Length: 2220 bp
ATGACGACCAGAGCAATTGGTGAAAAGGGCAGCCAAGTGTTCATCCAAAACCTCAAGATTACCCAGTTGGGGAAGTCGGGCCGAATCGACGAAGCAGTCATAGTTTTCTCACAAATGACTCAAAGGAACACCGTCACATACAACTCCATGATCTCCGCCTACGCCAAGAACGGTAGACTCGGCCATGCACGCCACCTGTTCGATAATATGTCTCACAGAAACTTGGTTTCTTGGAACACTATGATTGCAGGGTACCTGCACAGTAATATGGTGGAGGATGCTAATGGGCTTTTTGTTCACATGCCACAAAGAGACCTTTTCTCTTGGACTTTGATGATTACTTGCTACACACGTAACGGCGAGCTTGACAGAGCCAGACAGCTGTTCAGTTTGCTTCCGGATAAGCGGGACCCGGCTTGTTGGAATGCCATGATTGCAGGGTATGTGAAGAAGCGGAGGTTTGAGGAAGCTAAGAGAATGTTTGATGACATGCCGGTGAAGAATTTAGTTTCTTGGAATTCGATGCTAGCAGGGTATACCAAGAATGGGGAGATGCGTTTGGGGATGAAATTTTTTGAGGAGATGCCGGAGAGGAATGTGGTTTCGTGGAATTTGATGCTGGATGGATTTGTTCAGGTTGGTGAGTTGGATAATGCTTGGAAGTTTTTTGAGAAGATTCCAGAGCCTAATGTTGTTTCGTGGGTGACAATGTTGTGTGGGTTTGCGCAAAATGGGAAGATTGCGCAGGCGGAGGTTCTGTTTGAGAAGATGCCGAGTAGAAATGTGGTTGCTTGGAATGCAATGCTTGCAGCCTATGTACAAGACCTCCAAATTGACAAGGCTGCTGAAATATTCAGGGATATGCCGGAGATGGATTCAGTGTCATGGACTACAATGATCAATGGGTATGTTCGCGTTGGCAAGCTTGACGAAGCAAGGGAGTTGCTCAACCGGATGCCATACAGGAACATTGCAGCACAAACAGCAATGATATCTGGATATGCTCATAAAGGAAGGATGGATGAAGCAAGTCAGATCTTCAATCAGATTGCCATGCGTGATGTTGTTTCTTGGAACACCATGATTGCAGGCTATGCTCAGTGTGGCAGAATGGTTGAAGCTCTGTCACTTTTCAGAAACATGACCAACAAGGATGTAGTTTCTTGGAATACTCTGATTACTGGTTACGCTCAAGTAGGGGAGATGGACAAAGCACTTCAAATCTTCGAGGAGATGGGCGAGAAGAACATAGTTTCTTGGAATTCTCTAATTACAGGTTATGTGCAGAACGGGTTATATCTGGATGCACTGAAGAGTATTTTGATCATGGGACAAAAAGGAAAGAGGCTTGATCAGTCAACTTTTTCATGTGGTCTAAGTGCATGTGCCAATCTTGCAGCTTTGCGAATGGGAAGGCAACTTCACCATATGGTTGTGAAGACTGGCTATCTAAGTGATTTGTTTGTCAGCAATGCCCTGATCACGATGTATGCTAAATGTGGAATCTTTGCAAATGCTAATCTTGTGTTTGAAGATATCAATCATGGCGATATTGTTTCTTGGAATTCTTTGATATCTGGGTATGCTCTAAACGGATATGGAAAAGAGGCAGTAGCGCTCTTTGAAGAGATGCTAATAGAAGGGGTGAATCCAGATCAAGTGACCTTTGTTGGGGTGTTGTCTGCATGCAGTCACAGTGGGCTAGTTGATCGGGGATTGAAGCTGTTTAAGAGCATGACTGAAGTTCACCTTATTGAACCTCTAGCCGAACACTATGCTTGCATGGTTGACTTGCTTGGCCGTGCAGGAAGGTTAGAGGAAGCCTTTGAAATGGTGAGGGATATGAAGATCAAGGCAACTGCCAGAATATGGGGTGCATTGCTTGGAGCTTCCAAGACACACCGAAATTTACAATTTATCGAGTATGCTACCGAGAAGCTTTTAGAACTTGAACCTGATAGAGCTTCAAATTATGTACTCTTATCGAACATGCATGCTGAGGCAGGCAGATGGGATGAGGTTGAGAGAGTCAGGGTGTTGATGAAGGAAAGTGATACAGACAAGCAACCCGGCTGCAGTTGGATTGAAGTCAGAAATCAGGTGCATGCTTTTCTCTTTGATGATCCAGTGCAACCCAGAACAGCAGAGATATGCAGTGTATTGAAGTCTCTAGCCACAGAGATGACAAACACAAGTTCCTTCATGGCATCTTATGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR

Protein Analysis

739

Amino Acids

83.56

Weight (kDa)

6.25

Isoelectric Point (pI)

33.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_1 PF12854 42 - 71 2.6e-07 PPR repeat
PPR_2 PF13041 42 - 74 7.2e-08 PPR repeat family
PPR PF01535 45 - 74 1.3e-07 PPR repeat
PPR_2 PF13041 139 - 168 2.2e-06 PPR repeat family
PPR PF01535 140 - 168 4e-07 PPR repeat
PPR_2 PF13041 168 - 200 6.7e-07 PPR repeat family
PPR PF01535 170 - 200 3e-07 PPR repeat
PPR_1 PF12854 291 - 319 6.8e-07 PPR repeat
PPR_2 PF13041 292 - 324 2.1e-07 PPR repeat family
PPR PF01535 294 - 323 1.9e-08 PPR repeat
PPR_2 PF13041 353 - 384 8.2e-08 PPR repeat family
PPR_1 PF12854 354 - 382 1.7e-06 PPR repeat
PPR PF01535 356 - 385 2.4e-08 PPR repeat
PPR_3 PF13812 380 - 429 5.5e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 384 - 417 2.3e-09 PPR repeat family
PPR_1 PF12854 385 - 412 1.3e-07 PPR repeat
PPR PF01535 387 - 417 4.3e-09 PPR repeat
PPR_2 PF13041 415 - 464 1e-06 PPR repeat family
PPR_2 PF13041 517 - 564 1e-11 PPR repeat family
PPR PF01535 519 - 549 2.4e-08 PPR repeat
E_motif PF20431 634 - 696 5.3e-23 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 95
Acc16I TGCGCA 2 cut(s) 726, 744
Acc36I ACCTGC 1 cut(s) 264
Acc65I GGTACC 1 cut(s) 252
AccB1I GGYRCC 1 cut(s) 252
AccB7I CCANNNNNTGG 1 cut(s) 1869
AccI GTMKAC 2 cut(s) 175, 536
AccII CGCG 1 cut(s) 915
AccIII TCCGGA 1 cut(s) 397
AciI CCGC 4 cut(s) 156, 406, 454, 749
AclWI GGATC 1 cut(s) 2117
AcoI YGGCCR 2 cut(s) 181, 1798
AcsI RAATTY 7 cut(s) 502, 517, 569, 610, 1261, 1564, 1906
AcuI CTGAAG 2 cut(s) 1331, 1761
AfaI GTAC 3 cut(s) 254, 819, 1977
AfeI AGCGCT 1 cut(s) 1617
AfiI CCNNNNNNNGG 4 cut(s) 69, 546, 1671, 1869
AflIII ACRYGT 1 cut(s) 350
Alw26I GTCTC 3 cut(s) 216, 306, 2172
AlwI GGATC 1 cut(s) 2117
Aor13HI TCCGGA 1 cut(s) 397
Aor51HI AGCGCT 1 cut(s) 1617
AoxI GGCC 3 cut(s) 79, 181, 1798
ApeKI GCWGC 6 cut(s) 30, 809, 842, 974, 1397, 2073
ApoI RAATTY 7 cut(s) 502, 517, 569, 610, 1261, 1564, 1906
Asp718I GGTACC 1 cut(s) 252
AspLEI GCGC 3 cut(s) 727, 745, 1618
AspS9I GGNCC 2 cut(s) 79, 409
AsuC2I CCSGG 2 cut(s) 413, 2070
AsuHPI GGTGA 8 cut(s) 32, 508, 653, 715, 1415, 1657, 1739, 1846
AsuNHI GCTAGC 1 cut(s) 526
AvaII GGWCC 1 cut(s) 409
BanI GGYRCC 1 cut(s) 252
BbsI GAAGAC 1 cut(s) 1445
BbvCI CCTCAGC 1 cut(s) 1998
BbvI GCAGC 6 cut(s) 42, 821, 829, 986, 1409, 2060
BccI CCATC 6 cut(s) 617, 865, 1012, 1198, 1228, 2004
BceAI ACGGC 2 cut(s) 373, 1785
BcgI CGANNNNNNTGC 2 cut(s) 1757, 1791
BclI TGATCA 4 cut(s) 897, 1323, 1351, 1479
BcnI CCSGG 2 cut(s) 413, 2070
BcoDI GTCTC 3 cut(s) 216, 306, 2172
BfaI CTAG 4 cut(s) 527, 1703, 1763, 2171
BfmI CTRYAG 1 cut(s) 2074
BfoI RGCGCY 1 cut(s) 1619
BfuAI ACCTGC 1 cut(s) 264
BglII AGATCT 1 cut(s) 1035
BisI GCNGC 6 cut(s) 31, 810, 843, 975, 1398, 2074
BlsI GCNGC 6 cut(s) 32, 811, 844, 976, 1399, 2075
Bme1390I CCNGG 2 cut(s) 413, 2070
Bme18I GGWCC 1 cut(s) 409
BmgT120I GGNCC 2 cut(s) 79, 409
BmiI GGNNCC 3 cut(s) 254, 410, 411
BmrFI CCNGG 2 cut(s) 413, 2070
BmrI ACTGGG 1 cut(s) 58
BmtI GCTAGC 1 cut(s) 530
BmuI ACTGGG 1 cut(s) 58
BpiI GAAGAC 1 cut(s) 1445
Bpu10I CCTNAGC 1 cut(s) 1998
BpuEI CTTGAG 2 cut(s) 38, 1176
BpuMI CCSGG 2 cut(s) 413, 2070
BsaAI YACGTR 1 cut(s) 353
BsaBI GATNNNNATC 1 cut(s) 1539
BsaI GGTCTC 1 cut(s) 306
BsaWI WCCGGW 2 cut(s) 397, 951
BsaXI ACNNNNNCTCC 4 cut(s) 743, 773, 810, 840
Bsc4I CCNNNNNNNGG 4 cut(s) 69, 546, 1671, 1869
Bse118I RCCGGY 1 cut(s) 493
Bse1I ACTGG 4 cut(s) 64, 1186, 1447, 2126
Bse3DI GCAATG 5 cut(s) 807, 969, 993, 1477, 1877
Bse8I GATNNNNATC 1 cut(s) 1539
BseAI TCCGGA 1 cut(s) 397
BseJI GATNNNNATC 1 cut(s) 1539
BseLI CCNNNNNNNGG 4 cut(s) 69, 546, 1671, 1869
BseMI GCAATG 5 cut(s) 807, 969, 993, 1477, 1877
BseMII CTCAG 2 cut(s) 1112, 1989
BseNI ACTGG 4 cut(s) 64, 1186, 1447, 2126
BseRI GAGGAG 2 cut(s) 593, 1244
BseXI GCAGC 6 cut(s) 42, 821, 829, 986, 1409, 2060
BsgI GTGCAG 3 cut(s) 242, 1304, 1824
Bsh1236I CGCG 1 cut(s) 915
BshFI GGCC 3 cut(s) 81, 183, 1800
BshNI GGYRCC 1 cut(s) 252
BsiSI CCGG 7 cut(s) 398, 413, 494, 587, 866, 952, 2070
BslFI GGGAC 2 cut(s) 422, 1344
BslI CCNNNNNNNGG 4 cut(s) 69, 546, 1671, 1869
BsmAI GTCTC 3 cut(s) 216, 306, 2172
BsmFI GGGAC 2 cut(s) 422, 1344
BsmI GAATGC 2 cut(s) 430, 802
BsnI GGCC 3 cut(s) 81, 183, 1800
Bso31I GGTCTC 1 cut(s) 306
Bsp13I TCCGGA 1 cut(s) 397
Bsp1407I TGTACA 1 cut(s) 817
BspACI CCGC 4 cut(s) 156, 406, 454, 749
BspANI GGCC 3 cut(s) 81, 183, 1800
BspCNI CTCAG 2 cut(s) 1111, 1990
BspEI TCCGGA 1 cut(s) 397
BspFNI CGCG 1 cut(s) 915
BspLI GGNNCC 3 cut(s) 254, 410, 411
BspMAI CTGCAG 1 cut(s) 2078
BspMI ACCTGC 1 cut(s) 264
BspOI GCTAGC 1 cut(s) 530
BspPI GGATC 1 cut(s) 2117
BspT107I GGYRCC 1 cut(s) 252
BspTNI GGTCTC 1 cut(s) 306
BsrDI GCAATG 5 cut(s) 807, 969, 993, 1477, 1877
BsrFI RCCGGY 1 cut(s) 493
BsrGI TGTACA 1 cut(s) 817
BsrI ACTGG 4 cut(s) 64, 1186, 1447, 2126
BssAI RCCGGY 1 cut(s) 493
BssNAI GTATAC 1 cut(s) 537
Bst1107I GTATAC 1 cut(s) 537
Bst4CI ACNGT 4 cut(s) 133, 173, 263, 1697
Bst6I CTCTTC 2 cut(s) 1307, 1620
BstAPI GCANNNNNTGC 2 cut(s) 806, 1094
BstAUI TGTACA 1 cut(s) 817
BstBAI YACGTR 1 cut(s) 353
BstDEI CTNAG 5 cut(s) 471, 1098, 1376, 1451, 1998
BstFNI CGCG 1 cut(s) 915
BstH2I RGCGCY 1 cut(s) 1619
BstHHI GCGC 3 cut(s) 727, 745, 1618
BstMAI GTCTC 3 cut(s) 216, 306, 2172
BstMWI GCNNNNNNNGC 7 cut(s) 189, 434, 797, 806, 983, 1094, 1394
BstNSI RCATGY 7 cut(s) 304, 493, 1386, 1689, 1993, 1997, 2108
BstSCI CCNGG 2 cut(s) 411, 2068
BstSFI CTRYAG 1 cut(s) 2074
BstUI CGCG 1 cut(s) 915
BstV1I GCAGC 6 cut(s) 42, 821, 829, 986, 1409, 2060
BstV2I GAAGAC 1 cut(s) 1445
BstX2I RGATCY 1 cut(s) 1035
BstYI RGATCY 1 cut(s) 1035
BstZ17I GTATAC 1 cut(s) 537
BsuRI GGCC 3 cut(s) 81, 183, 1800
BtsI GCAGTG 1 cut(s) 2161
BtsIMutI CAGTG 6 cut(s) 885, 1106, 1307, 1702, 2133, 2161
BveI ACCTGC 1 cut(s) 264
CfoI GCGC 3 cut(s) 727, 745, 1618
Cfr10I RCCGGY 1 cut(s) 493
Cfr13I GGNCC 2 cut(s) 79, 409
Csp6I GTAC 3 cut(s) 253, 818, 1976
CviQI GTAC 3 cut(s) 253, 818, 1976
DdeI CTNAG 5 cut(s) 471, 1098, 1376, 1451, 1998
DrdI GACNNNNNNGTC 1 cut(s) 95
DseDI GACNNNNNNGTC 1 cut(s) 95
EaeI YGGCCR 2 cut(s) 181, 1798
Eam1104I CTCTTC 2 cut(s) 1307, 1620
EarI CTCTTC 2 cut(s) 1307, 1620
EciI GGCGGA 2 cut(s) 145, 764
Eco31I GGTCTC 1 cut(s) 306
Eco32I GATATC 3 cut(s) 993, 1537, 1575
Eco47I GGWCC 1 cut(s) 409
Eco47III AGCGCT 1 cut(s) 1617
Eco57I CTGAAG 2 cut(s) 1331, 1761
EcoO109I RGGNCCY 1 cut(s) 409
EcoRI GAATTC 3 cut(s) 517, 1261, 1564
EcoRV GATATC 3 cut(s) 993, 1537, 1575
EcoT22I ATGCAT 1 cut(s) 1995
FalI AAGNNNNNCTT 2 cut(s) 1734, 1766
FaqI GGGAC 2 cut(s) 422, 1344
FauI CCCGC 1 cut(s) 399
FauNDI CATATG 1 cut(s) 1428
FbaI TGATCA 4 cut(s) 897, 1323, 1351, 1479
FblI GTMKAC 2 cut(s) 175, 536
Fnu4HI GCNGC 6 cut(s) 31, 810, 843, 975, 1398, 2074
Fsp4HI GCNGC 6 cut(s) 31, 810, 843, 975, 1398, 2074
FspBI CTAG 4 cut(s) 527, 1703, 1763, 2171
FspI TGCGCA 2 cut(s) 726, 744
GlaI GCGC 3 cut(s) 726, 744, 1617
GluI GCNGC 6 cut(s) 31, 810, 843, 975, 1398, 2074
HaeII RGCGCY 1 cut(s) 1619
HaeIII GGCC 3 cut(s) 81, 183, 1800
HapII CCGG 7 cut(s) 398, 413, 494, 587, 866, 952, 2070
HhaI GCGC 3 cut(s) 727, 745, 1618
Hin6I GCGC 3 cut(s) 725, 743, 1616
HinP1I GCGC 3 cut(s) 725, 743, 1616
HincII GTYRAC 2 cut(s) 1359, 1789
HindII GTYRAC 2 cut(s) 1359, 1789
HindIII AAGCTT 2 cut(s) 923, 1937
HinfI GANTC 8 cut(s) 84, 118, 177, 676, 875, 1503, 1648, 2028
HpaII CCGG 7 cut(s) 398, 413, 494, 587, 866, 952, 2070
HphI GGTGA 8 cut(s) 32, 508, 653, 715, 1415, 1657, 1739, 1846
Hpy166II GTNNAC 6 cut(s) 176, 298, 537, 1359, 1747, 1789
Hpy188I TCNGA 5 cut(s) 1035, 1047, 1136, 1176, 2093
Hpy188III TCNNGA 7 cut(s) 55, 398, 680, 996, 1301, 1483, 1652
Hpy8I GTNNAC 6 cut(s) 176, 298, 537, 1359, 1747, 1789
Hpy99I CGWCG 1 cut(s) 92
HpyAV CCTTC 6 cut(s) 1008, 1407, 1634, 1803, 2038, 2209
HpyCH4III ACNGT 4 cut(s) 133, 173, 263, 1697
HpyCH4IV ACGT 1 cut(s) 352
HpyF10VI GCNNNNNNNGC 7 cut(s) 189, 434, 797, 806, 983, 1094, 1394
HpyF3I CTNAG 5 cut(s) 471, 1098, 1376, 1451, 1998
HpySE526I ACGT 1 cut(s) 352
HspAI GCGC 3 cut(s) 725, 743, 1616
KflI GGGWCCC 1 cut(s) 409
Kpn2I TCCGGA 1 cut(s) 397
KpnI GGTACC 1 cut(s) 256
Ksp22I TGATCA 4 cut(s) 897, 1323, 1351, 1479
LmnI GCTCC 1 cut(s) 1886
Lsp1109I GCAGC 6 cut(s) 42, 821, 829, 986, 1409, 2060
MaeI CTAG 4 cut(s) 527, 1703, 1763, 2171
MaeII ACGT 1 cut(s) 352
MaeIII GTNAC 7 cut(s) 133, 353, 703, 1125, 1184, 1660, 1691
MfeI CAATTG 1 cut(s) 15
MflI RGATCY 1 cut(s) 1035
MlyI GAGTC 3 cut(s) 112, 171, 2037
MmeI TCCRAC 3 cut(s) 401, 627, 2060
Mph1103I ATGCAT 1 cut(s) 1995
MroI TCCGGA 1 cut(s) 397
MseI TTAA 1 cut(s) 1728
MslI CAYNNNNRTG 2 cut(s) 494, 2180
MspA1I CMGCKG 1 cut(s) 382
MspI CCGG 7 cut(s) 398, 413, 494, 587, 866, 952, 2070
MspR9I CCNGG 2 cut(s) 413, 2070
MunI CAATTG 1 cut(s) 15
Mva1269I GAATGC 2 cut(s) 430, 802
MvnI CGCG 1 cut(s) 915
MwoI GCNNNNNNNGC 7 cut(s) 189, 434, 797, 806, 983, 1094, 1394
NciI CCSGG 2 cut(s) 413, 2070
NdeI CATATG 1 cut(s) 1428
NheI GCTAGC 1 cut(s) 526
NlaIV GGNNCC 3 cut(s) 254, 410, 411
NmeAIII GCCGAG 2 cut(s) 159, 798
NmuCI GTSAC 5 cut(s) 133, 703, 1125, 1660, 1691
NsbI TGCGCA 2 cut(s) 726, 744
NsiI ATGCAT 1 cut(s) 1995
NspI RCATGY 7 cut(s) 304, 493, 1386, 1689, 1993, 1997, 2108
PaeI GCATGC 3 cut(s) 1689, 1997, 2108
PctI GAATGC 2 cut(s) 430, 802
PfeI GAWTC 5 cut(s) 84, 676, 875, 1503, 1648
PflMI CCANNNNNTGG 1 cut(s) 1869
PkrI GCNGC 6 cut(s) 32, 811, 844, 976, 1399, 2075
PleI GAGTC 3 cut(s) 112, 171, 2036
PpsI GAGTC 3 cut(s) 112, 171, 2036
Ppu21I YACGTR 1 cut(s) 353
PpuMI RGGWCCY 1 cut(s) 409
Psp5II RGGWCCY 1 cut(s) 409
PspN4I GGNNCC 3 cut(s) 254, 410, 411
PspPI GGNCC 2 cut(s) 79, 409
PspPPI RGGWCCY 1 cut(s) 409
PstI CTGCAG 1 cut(s) 2078
PsuI RGATCY 1 cut(s) 1035
PvuII CAGCTG 1 cut(s) 382
RsaI GTAC 3 cut(s) 254, 819, 1977
RsaNI GTAC 3 cut(s) 253, 818, 1976
RseI CAYNNNNRTG 2 cut(s) 494, 2180
SaqAI TTAA 1 cut(s) 1728
SatI GCNGC 6 cut(s) 31, 810, 843, 975, 1398, 2074
Sau96I GGNCC 2 cut(s) 79, 409
SchI GAGTC 3 cut(s) 112, 171, 2037
ScrFI CCNGG 2 cut(s) 413, 2070
SfcI CTRYAG 1 cut(s) 2074
SinI GGWCC 1 cut(s) 409
SmiMI CAYNNNNRTG 2 cut(s) 494, 2180
SmlI CTYRAG 2 cut(s) 53, 1191
SmoI CTYRAG 2 cut(s) 53, 1191
SphI GCATGC 3 cut(s) 1689, 1997, 2108
SsiI CCGC 4 cut(s) 156, 406, 454, 749
SspI AATATT 1 cut(s) 852
SspMI CTAG 4 cut(s) 527, 1703, 1763, 2171
StyD4I CCNGG 2 cut(s) 411, 2068
TaaI ACNGT 4 cut(s) 133, 173, 263, 1697
TaiI ACGT 1 cut(s) 355
TaqI TCGA 6 cut(s) 87, 201, 521, 1227, 1920, 1985
TatI WGTACW 2 cut(s) 817, 1975
TfiI GAWTC 5 cut(s) 84, 676, 875, 1503, 1648
Tru1I TTAA 1 cut(s) 1728
Tru9I TTAA 1 cut(s) 1728
TscAI CASTG 6 cut(s) 885, 1106, 1314, 1702, 2133, 2161
TseFI GTSAC 5 cut(s) 133, 703, 1125, 1660, 1691
TseI GCWGC 6 cut(s) 30, 809, 842, 974, 1397, 2073
Tsp45I GTSAC 5 cut(s) 133, 703, 1125, 1660, 1691
TspDTI ATGAA 7 cut(s) 31, 581, 1038, 1356, 1859, 2057, 2191
TspGWI ACGGA 1 cut(s) 1608
TspRI CASTG 6 cut(s) 885, 1106, 1314, 1702, 2133, 2161
Van91I CCANNNNNTGG 1 cut(s) 1869
VpaK11BI GGWCC 1 cut(s) 409
XapI RAATTY 7 cut(s) 502, 517, 569, 610, 1261, 1564, 1906
XceI RCATGY 7 cut(s) 304, 493, 1386, 1689, 1993, 1997, 2108
XmiI GTMKAC 2 cut(s) 175, 536
XspI CTAG 4 cut(s) 527, 1703, 1763, 2171
Zsp2I ATGCAT 1 cut(s) 1995
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.