Rh4BG055900

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0006945
Physical Location & Seq
Reverse (-)
10055685 .. 10057889
2205 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG055900.1

Sequence Viewer

Length: 2205 bp
ATGACGAGGGGCAGCAGCCAAGTATTCATCCAAAACCTCAAGATTACCCAGTTGGGGAAGTCAGGCCGAATCGACGAAGCAGTCAAAGTTTTCTCGCAAATGACTCAAAGGAACACCGTCACATACAACTCCATGATCTCCGCCTACGGCAAGAACCGTAGACTCGGCCATGCACGCCACCTGTTCGATAATATGTCTCACAGAAACTTGGTTTCTTGGAACACTATGATTGCAGGGTACCTGCACAGTAATATGGTGGAGGATGCTTATGGGCTTTTTGTTCACATGCCACAAAGAGACCTTTTCTCTTGGACTTTGATGATTACTTGCTACACACGTAACGGCGAGCTTGACAGAGCCAGACAGCTGTTCAGTTTGCTTCCGGATAAGCGGGACCCGGCTTGTTGGAATGCCATGATTGCAGGGTATGTGAAGAAGAGGAGGTTTGAGGATGCGAAGAGAATGTTTGATGAAATGCCGGTGAAGAACTTAGTTTCTTGGAATTCGATGCTAGCGGGGTATACTAAGAATGGGGAGATGTGTTTGGGGGTGAAGTTTTTTGAGGAGATGCCGGAGAGGAATGTGGTTTCGTGGAATTTGATGCTGGATGGATTTGTTCAGGTTGGTGAGTTGGATAATGCTTGGAAGTTTTTTGAGAAGATTCCGGAGCCTAATGTTGTTTCGTGGGTGACAATGTTGTGTGGGTTTGCACAAAATGGGAAGATTGCGCAGGCGGAGGATCTGTTTGAGAAGATGCCGAGTAGAAGTGTGGTTGCTTGGAATGCAATGCTTGCAGCCTATGTACAAGACCGCCGAATTGACAAGGCTGTTGAAATATTCAGGGATATGCCGGAGATGGATTCAGTGTCGTGGACTACAATGATCAATGGGTATGTTCGCGTTGGCAAGCTTGACGAAGCAAGGCAGTTGCTCAACCGGATGCCATACAGGAACATTGCAGCACAAACAGCAATGATATCTGGATATGCTCATAATGGAAGGATGGATGAAGCAAGTCAGATCTTCAATCAGATTGCCATGCGTGATGTTGTTTGTTGGAACACCATGATTGCAGGCTATGCTCAGTGTGGCAGAATGGTTGAAGCTCTATCTCATTTCAGAAACATGACCAACAAGGATGTAGTTTCTTGGAACACTCTGATTACTGGTTATGCTCAAGTAGGGGAGATGGACAAAGCACTTCAAATCTTTGAGGAGATGGGGGAGAAGAACATAGTTTCTTGGAATTCTCTAATTACAGGATATGTGCAGAACGGGTTATATCTGGATGCACTGAAGAGTATTGTGATTATGGATCAGGAAGGAAAGAGGCTTGATCAATCAACTTTTTCATGTGGTCTAAGTGCATGTGCCAATCTTGCAGCTTTTCAACTGGGAAGGCAACTTCACCAAATGGTTGTGAAGACCGGCTATCTAAGTGATTTGTTTGTCAGCAATGCCCTGATTACTATGTATGCTAAATGTGGAATGGTTGCAAATGCTAATCTTGTGTTTGAAGATATCAATCATGGCGATATTGTTTCTTGGAATTCTTTGATATCTGGGTATGCTCTAAATGGATATGGTAAAGAGGCAGTAGCACTCTTTCAAGAGATGCTAATAGAAGGGGTGAATCCAGATCAAGTGACCTTTGTTGGGGTGTTGTCTGCATGCAGTCACAGTGGGCAGGTTGATCAGGGATTAAAACTGTTTAAGAGCATGACTGAAGTTCACCTTATTGAACCTGTAGCCGAACACTATGCTTGCATGGTTGACTTGCTTGGCCGTGCAGGAAGGTTAGAGGAAGCCTTTGAAATGGTAAGGGATATGAAGATTAAGGCAACTGCCAGAATATGGGGTGCATTGCTTGGAGCTTCCAGGATACACCGAAATTTACAATTTGGCAAGTATGCTACCGAGAAGCTTTTAGAACTTGAACCTGATAAAGCTTCAAATTATGTACTCTTATCGAACATGCATGCTGAGGCAGGCAGATGGGATGAGGTTGAGAGAGTCAGGGTGTTAATGAAGGAAAGTGATACAGACAAGCAATCCGGCTGCAGTTGGATTGAAGTCAGGAATCAGGTGCATGCTTTTCTCTTTGATGATCCAGTGCAACCCAGAACATCAGAGATATGCAGCGTATTGAAGTCTCTAACCACAGAGATGACAAACACAAGTTCCTTCATGGCATCTTATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR

Protein Analysis

734

Amino Acids

83.19

Weight (kDa)

6.25

Isoelectric Point (pI)

35.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 37 - 69 5.4e-07 PPR repeat family
PPR PF01535 40 - 69 1.3e-06 PPR repeat
PPR_2 PF13041 69 - 100 4.3e-06 PPR repeat family
PPR_2 PF13041 134 - 163 2.4e-06 PPR repeat family
PPR PF01535 135 - 163 3.7e-07 PPR repeat
PPR_2 PF13041 224 - 257 5.3e-06 PPR repeat family
PPR_2 PF13041 256 - 285 5.7e-06 PPR repeat family
PPR PF01535 258 - 286 4.8e-06 PPR repeat
PPR_1 PF12854 286 - 314 9.2e-07 PPR repeat
PPR_2 PF13041 287 - 319 2e-07 PPR repeat family
PPR PF01535 289 - 318 4.9e-08 PPR repeat
PPR_2 PF13041 348 - 379 3.1e-06 PPR repeat family
PPR PF01535 351 - 380 1.7e-06 PPR repeat
PPR_2 PF13041 379 - 412 2.3e-09 PPR repeat family
PPR_1 PF12854 380 - 407 1.2e-07 PPR repeat
PPR_3 PF13812 380 - 424 9.8e-06 Pentatricopeptide repeat domain
PPR PF01535 382 - 412 4.2e-09 PPR repeat
PPR_2 PF13041 410 - 459 1.2e-06 PPR repeat family
PPR_2 PF13041 512 - 559 1.8e-11 PPR repeat family
PPR PF01535 514 - 544 3.7e-08 PPR repeat
E_motif PF20431 629 - 691 3.3e-22 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 80
Acc16I TGCGCA 1 cut(s) 729
Acc36I ACCTGC 2 cut(s) 249, 1678
Acc65I GGTACC 1 cut(s) 237
AccB1I GGYRCC 1 cut(s) 237
AccB7I CCANNNNNTGG 1 cut(s) 1854
AccI GTMKAC 2 cut(s) 160, 521
AccII CGCG 1 cut(s) 900
AccIII TCCGGA 2 cut(s) 382, 664
AciI CCGC 5 cut(s) 141, 391, 515, 734, 811
AclWI GGATC 3 cut(s) 747, 1323, 2102
AcoI YGGCCR 2 cut(s) 166, 1783
AcsI RAATTY 5 cut(s) 502, 595, 1246, 1549, 1891
AcuI CTGAAG 2 cut(s) 1316, 1746
AfaI GTAC 3 cut(s) 239, 804, 1962
AfiI CCNNNNNNNGG 3 cut(s) 54, 1656, 1854
AflIII ACRYGT 1 cut(s) 335
AjnI CCWGG 1 cut(s) 1877
AluBI AGCT 8 cut(s) 349, 367, 910, 1106, 1385, 1874, 1924, 1949
AluI AGCT 8 cut(s) 349, 367, 910, 1106, 1385, 1874, 1924, 1949
Alw26I GTCTC 3 cut(s) 201, 291, 2157
AlwI GGATC 3 cut(s) 747, 1323, 2102
Aor13HI TCCGGA 2 cut(s) 382, 664
AoxI GGCC 3 cut(s) 64, 166, 1783
ApeKI GCWGC 7 cut(s) 12, 15, 794, 959, 1382, 2058, 2139
ApoI RAATTY 5 cut(s) 502, 595, 1246, 1549, 1891
Asp718I GGTACC 1 cut(s) 237
AspLEI GCGC 1 cut(s) 730
AspS9I GGNCC 1 cut(s) 394
AsuC2I CCSGG 1 cut(s) 398
AsuHPI GGTGA 7 cut(s) 493, 562, 638, 700, 1400, 1642, 1724
AsuNHI GCTAGC 1 cut(s) 511
AvaII GGWCC 1 cut(s) 394
BanI GGYRCC 1 cut(s) 237
BbsI GAAGAC 1 cut(s) 1430
BbvCI CCTCAGC 1 cut(s) 1983
BbvI GCAGC 7 cut(s) 24, 27, 806, 971, 1394, 2045, 2151
BccI CCATC 6 cut(s) 602, 850, 997, 1183, 1213, 1989
BceAI ACGGC 3 cut(s) 163, 358, 1770
BcgI CGANNNNNNTGC 2 cut(s) 1742, 1776
BciT130I CCWGG 1 cut(s) 1879
BciVI GTATCC 1 cut(s) 1875
BclI TGATCA 3 cut(s) 882, 1336, 1693
BcnI CCSGG 1 cut(s) 398
BcoDI GTCTC 3 cut(s) 201, 291, 2157
BfaI CTAG 1 cut(s) 512
BfmI CTRYAG 2 cut(s) 1746, 2059
BfuAI ACCTGC 2 cut(s) 249, 1678
BfuI GTATCC 1 cut(s) 1875
BglII AGATCT 1 cut(s) 1020
BisI GCNGC 7 cut(s) 13, 16, 795, 960, 1383, 2059, 2140
BlsI GCNGC 7 cut(s) 14, 17, 796, 961, 1384, 2060, 2141
Bme1390I CCNGG 2 cut(s) 398, 1879
Bme18I GGWCC 1 cut(s) 394
BmgT120I GGNCC 1 cut(s) 394
BmiI GGNNCC 4 cut(s) 239, 395, 396, 669
BmrFI CCNGG 2 cut(s) 398, 1879
BmrI ACTGGG 2 cut(s) 43, 1403
BmtI GCTAGC 1 cut(s) 515
BmuI ACTGGG 2 cut(s) 43, 1403
BpiI GAAGAC 1 cut(s) 1430
Bpu10I CCTNAGC 1 cut(s) 1983
BpuEI CTTGAG 2 cut(s) 23, 1161
BpuMI CCSGG 1 cut(s) 398
BsaAI YACGTR 1 cut(s) 338
BsaBI GATNNNNATC 1 cut(s) 1524
BsaI GGTCTC 1 cut(s) 291
BsaWI WCCGGW 3 cut(s) 382, 664, 936
BsaXI ACNNNNNCTCC 2 cut(s) 728, 758
Bsc4I CCNNNNNNNGG 3 cut(s) 54, 1656, 1854
Bse118I RCCGGY 2 cut(s) 478, 1427
Bse1I ACTGG 4 cut(s) 49, 1171, 1398, 2111
Bse3DI GCAATG 5 cut(s) 792, 954, 978, 1462, 1862
Bse8I GATNNNNATC 1 cut(s) 1524
BseAI TCCGGA 2 cut(s) 382, 664
BseBI CCWGG 1 cut(s) 1879
BseJI GATNNNNATC 1 cut(s) 1524
BseLI CCNNNNNNNGG 3 cut(s) 54, 1656, 1854
BseMI GCAATG 5 cut(s) 792, 954, 978, 1462, 1862
BseMII CTCAG 2 cut(s) 1097, 1974
BseNI ACTGG 4 cut(s) 49, 1171, 1398, 2111
BseRI GAGGAG 3 cut(s) 454, 578, 1229
BseXI GCAGC 7 cut(s) 24, 27, 806, 971, 1394, 2045, 2151
BsgI GTGCAG 3 cut(s) 227, 1289, 1809
Bsh1236I CGCG 1 cut(s) 900
BshFI GGCC 3 cut(s) 66, 168, 1785
BshNI GGYRCC 1 cut(s) 237
BsiSI CCGG 9 cut(s) 383, 398, 479, 572, 665, 851, 937, 1428, 2055
BslFI GGGAC 1 cut(s) 407
BslI CCNNNNNNNGG 3 cut(s) 54, 1656, 1854
BsmAI GTCTC 3 cut(s) 201, 291, 2157
BsmFI GGGAC 1 cut(s) 407
BsmI GAATGC 2 cut(s) 415, 787
BsnI GGCC 3 cut(s) 66, 168, 1785
Bso31I GGTCTC 1 cut(s) 291
Bsp13I TCCGGA 2 cut(s) 382, 664
Bsp1407I TGTACA 1 cut(s) 802
Bsp143I GATC 9 cut(s) 135, 739, 882, 1020, 1315, 1336, 1639, 1693, 2107
BspACI CCGC 5 cut(s) 141, 391, 515, 734, 811
BspANI GGCC 3 cut(s) 66, 168, 1785
BspCNI CTCAG 2 cut(s) 1096, 1975
BspEI TCCGGA 2 cut(s) 382, 664
BspFNI CGCG 1 cut(s) 900
BspLI GGNNCC 4 cut(s) 239, 395, 396, 669
BspMAI CTGCAG 1 cut(s) 2063
BspMI ACCTGC 2 cut(s) 249, 1678
BspOI GCTAGC 1 cut(s) 515
BspPI GGATC 3 cut(s) 747, 1323, 2102
BspT107I GGYRCC 1 cut(s) 237
BspTNI GGTCTC 1 cut(s) 291
BsrDI GCAATG 5 cut(s) 792, 954, 978, 1462, 1862
BsrFI RCCGGY 2 cut(s) 478, 1427
BsrGI TGTACA 1 cut(s) 802
BsrI ACTGG 4 cut(s) 49, 1171, 1398, 2111
BssAI RCCGGY 2 cut(s) 478, 1427
BssMI GATC 9 cut(s) 135, 739, 882, 1020, 1315, 1336, 1639, 1693, 2107
BssNAI GTATAC 1 cut(s) 522
Bst1107I GTATAC 1 cut(s) 522
Bst2UI CCWGG 1 cut(s) 1879
Bst4CI ACNGT 5 cut(s) 118, 158, 248, 1682, 1710
Bst6I CTCTTC 3 cut(s) 431, 452, 1292
BstAPI GCANNNNNTGC 2 cut(s) 791, 1079
BstAUI TGTACA 1 cut(s) 802
BstBAI YACGTR 1 cut(s) 338
BstDEI CTNAG 6 cut(s) 490, 525, 1083, 1361, 1436, 1983
BstFNI CGCG 1 cut(s) 900
BstHHI GCGC 1 cut(s) 730
BstKTI GATC 9 cut(s) 138, 742, 885, 1023, 1318, 1339, 1642, 1696, 2110
BstMAI GTCTC 3 cut(s) 201, 291, 2157
BstMBI GATC 9 cut(s) 135, 739, 882, 1020, 1315, 1336, 1639, 1693, 2107
BstMWI GCNNNNNNNGC 7 cut(s) 174, 419, 782, 791, 968, 1079, 1379
BstNI CCWGG 1 cut(s) 1879
BstNSI RCATGY 6 cut(s) 289, 1371, 1674, 1978, 1982, 2093
BstSCI CCNGG 2 cut(s) 396, 1877
BstSFI CTRYAG 2 cut(s) 1746, 2059
BstUI CGCG 1 cut(s) 900
BstV1I GCAGC 7 cut(s) 24, 27, 806, 971, 1394, 2045, 2151
BstV2I GAAGAC 1 cut(s) 1430
BstX2I RGATCY 2 cut(s) 739, 1020
BstYI RGATCY 2 cut(s) 739, 1020
BstZ17I GTATAC 1 cut(s) 522
BsuI GTATCC 1 cut(s) 1875
BsuRI GGCC 3 cut(s) 66, 168, 1785
BtsIMutI CAGTG 5 cut(s) 870, 1091, 1292, 1687, 2118
BveI ACCTGC 2 cut(s) 249, 1678
CfoI GCGC 1 cut(s) 730
Cfr10I RCCGGY 2 cut(s) 478, 1427
Cfr13I GGNCC 1 cut(s) 394
Csp6I GTAC 3 cut(s) 238, 803, 1961
CviQI GTAC 3 cut(s) 238, 803, 1961
DdeI CTNAG 6 cut(s) 490, 525, 1083, 1361, 1436, 1983
DpnI GATC 9 cut(s) 137, 741, 884, 1022, 1317, 1338, 1641, 1695, 2109
DpnII GATC 9 cut(s) 135, 739, 882, 1020, 1315, 1336, 1639, 1693, 2107
DrdI GACNNNNNNGTC 1 cut(s) 80
DseDI GACNNNNNNGTC 1 cut(s) 80
EaeI YGGCCR 2 cut(s) 166, 1783
Eam1104I CTCTTC 3 cut(s) 431, 452, 1292
EarI CTCTTC 3 cut(s) 431, 452, 1292
EciI GGCGGA 2 cut(s) 130, 749
Eco31I GGTCTC 1 cut(s) 291
Eco32I GATATC 3 cut(s) 978, 1522, 1560
Eco47I GGWCC 1 cut(s) 394
Eco57I CTGAAG 2 cut(s) 1316, 1746
EcoO109I RGGNCCY 1 cut(s) 394
EcoRI GAATTC 3 cut(s) 502, 1246, 1549
EcoRII CCWGG 1 cut(s) 1877
EcoRV GATATC 3 cut(s) 978, 1522, 1560
EcoT22I ATGCAT 1 cut(s) 1980
FalI AAGNNNNNCTT 2 cut(s) 1719, 1751
FaqI GGGAC 1 cut(s) 407
FauI CCCGC 2 cut(s) 384, 508
FbaI TGATCA 3 cut(s) 882, 1336, 1693
FblI GTMKAC 2 cut(s) 160, 521
Fnu4HI GCNGC 7 cut(s) 13, 16, 795, 960, 1383, 2059, 2140
Fsp4HI GCNGC 7 cut(s) 13, 16, 795, 960, 1383, 2059, 2140
FspBI CTAG 1 cut(s) 512
FspI TGCGCA 1 cut(s) 729
GlaI GCGC 1 cut(s) 729
GluI GCNGC 7 cut(s) 13, 16, 795, 960, 1383, 2059, 2140
HaeIII GGCC 3 cut(s) 66, 168, 1785
HapII CCGG 9 cut(s) 383, 398, 479, 572, 665, 851, 937, 1428, 2055
HhaI GCGC 1 cut(s) 730
Hin6I GCGC 1 cut(s) 728
HinP1I GCGC 1 cut(s) 728
HincII GTYRAC 1 cut(s) 1774
HindII GTYRAC 1 cut(s) 1774
HindIII AAGCTT 3 cut(s) 908, 1922, 1947
HinfI GANTC 8 cut(s) 69, 103, 162, 661, 860, 1633, 2013, 2080
HpaII CCGG 9 cut(s) 383, 398, 479, 572, 665, 851, 937, 1428, 2055
HphI GGTGA 7 cut(s) 493, 562, 638, 700, 1400, 1642, 1724
Hpy166II GTNNAC 6 cut(s) 161, 283, 522, 873, 1732, 1774
Hpy188I TCNGA 5 cut(s) 1020, 1032, 1121, 1161, 2131
Hpy188III TCNNGA 9 cut(s) 40, 383, 665, 981, 1286, 1319, 1610, 1637, 2077
Hpy8I GTNNAC 6 cut(s) 161, 283, 522, 873, 1732, 1774
Hpy99I CGWCG 1 cut(s) 77
HpyAV CCTTC 7 cut(s) 993, 1316, 1392, 1619, 1788, 2023, 2194
HpyCH4III ACNGT 5 cut(s) 118, 158, 248, 1682, 1710
HpyCH4IV ACGT 1 cut(s) 337
HpyF10VI GCNNNNNNNGC 7 cut(s) 174, 419, 782, 791, 968, 1079, 1379
HpyF3I CTNAG 6 cut(s) 490, 525, 1083, 1361, 1436, 1983
HpySE526I ACGT 1 cut(s) 337
HspAI GCGC 1 cut(s) 728
KflI GGGWCCC 1 cut(s) 394
Kpn2I TCCGGA 2 cut(s) 382, 664
KpnI GGTACC 1 cut(s) 241
Ksp22I TGATCA 3 cut(s) 882, 1336, 1693
Kzo9I GATC 9 cut(s) 135, 739, 882, 1020, 1315, 1336, 1639, 1693, 2107
LmnI GCTCC 2 cut(s) 667, 1871
Lsp1109I GCAGC 7 cut(s) 24, 27, 806, 971, 1394, 2045, 2151
MaeI CTAG 1 cut(s) 512
MaeII ACGT 1 cut(s) 337
MaeIII GTNAC 5 cut(s) 118, 338, 688, 1645, 1676
MalI GATC 9 cut(s) 137, 741, 884, 1022, 1317, 1338, 1641, 1695, 2109
MboI GATC 9 cut(s) 135, 739, 882, 1020, 1315, 1336, 1639, 1693, 2107
MflI RGATCY 2 cut(s) 739, 1020
MluCI AATT 9 cut(s) 502, 595, 816, 1246, 1254, 1549, 1891, 1898, 1954
MlyI GAGTC 3 cut(s) 97, 156, 2022
MmeI TCCRAC 4 cut(s) 386, 612, 1037, 2045
Mph1103I ATGCAT 1 cut(s) 1980
MroI TCCGGA 2 cut(s) 382, 664
MseI TTAA 4 cut(s) 1703, 1713, 1836, 2024
MslI CAYNNNNRTG 1 cut(s) 2165
MspA1I CMGCKG 1 cut(s) 367
MspI CCGG 9 cut(s) 383, 398, 479, 572, 665, 851, 937, 1428, 2055
MspR9I CCNGG 2 cut(s) 398, 1879
Mva1269I GAATGC 2 cut(s) 415, 787
MvaI CCWGG 1 cut(s) 1879
MvnI CGCG 1 cut(s) 900
MwoI GCNNNNNNNGC 7 cut(s) 174, 419, 782, 791, 968, 1079, 1379
NciI CCSGG 1 cut(s) 398
NdeII GATC 9 cut(s) 135, 739, 882, 1020, 1315, 1336, 1639, 1693, 2107
NheI GCTAGC 1 cut(s) 511
NlaIV GGNNCC 4 cut(s) 239, 395, 396, 669
NmeAIII GCCGAG 2 cut(s) 144, 783
NmuCI GTSAC 4 cut(s) 118, 688, 1645, 1676
NsbI TGCGCA 1 cut(s) 729
NsiI ATGCAT 1 cut(s) 1980
NspI RCATGY 6 cut(s) 289, 1371, 1674, 1978, 1982, 2093
PaeI GCATGC 3 cut(s) 1674, 1982, 2093
PctI GAATGC 2 cut(s) 415, 787
PfeI GAWTC 5 cut(s) 69, 661, 860, 1633, 2080
PflMI CCANNNNNTGG 1 cut(s) 1854
PfoI TCCNGGA 1 cut(s) 1877
PkrI GCNGC 7 cut(s) 14, 17, 796, 961, 1384, 2060, 2141
PleI GAGTC 3 cut(s) 97, 156, 2021
PpsI GAGTC 3 cut(s) 97, 156, 2021
Ppu21I YACGTR 1 cut(s) 338
PpuMI RGGWCCY 1 cut(s) 394
Psp5II RGGWCCY 1 cut(s) 394
Psp6I CCWGG 1 cut(s) 1877
PspGI CCWGG 1 cut(s) 1877
PspN4I GGNNCC 4 cut(s) 239, 395, 396, 669
PspPI GGNCC 1 cut(s) 394
PspPPI RGGWCCY 1 cut(s) 394
PstI CTGCAG 1 cut(s) 2063
PsuI RGATCY 2 cut(s) 739, 1020
PvuII CAGCTG 1 cut(s) 367
RsaI GTAC 3 cut(s) 239, 804, 1962
RsaNI GTAC 3 cut(s) 238, 803, 1961
RseI CAYNNNNRTG 1 cut(s) 2165
SaqAI TTAA 4 cut(s) 1703, 1713, 1836, 2024
SatI GCNGC 7 cut(s) 13, 16, 795, 960, 1383, 2059, 2140
Sau3AI GATC 9 cut(s) 135, 739, 882, 1020, 1315, 1336, 1639, 1693, 2107
Sau96I GGNCC 1 cut(s) 394
SchI GAGTC 3 cut(s) 97, 156, 2022
ScrFI CCNGG 2 cut(s) 398, 1879
SfcI CTRYAG 2 cut(s) 1746, 2059
SinI GGWCC 1 cut(s) 394
SmiMI CAYNNNNRTG 1 cut(s) 2165
SmlI CTYRAG 2 cut(s) 38, 1176
SmoI CTYRAG 2 cut(s) 38, 1176
SphI GCATGC 3 cut(s) 1674, 1982, 2093
Sse9I AATT 9 cut(s) 502, 595, 816, 1246, 1254, 1549, 1891, 1898, 1954
SsiI CCGC 5 cut(s) 141, 391, 515, 734, 811
SspI AATATT 1 cut(s) 837
SspMI CTAG 1 cut(s) 512
StyD4I CCNGG 2 cut(s) 396, 1877
TaaI ACNGT 5 cut(s) 118, 158, 248, 1682, 1710
TaiI ACGT 1 cut(s) 340
TaqI TCGA 4 cut(s) 72, 186, 506, 1970
TasI AATT 9 cut(s) 502, 595, 816, 1246, 1254, 1549, 1891, 1898, 1954
TatI WGTACW 2 cut(s) 802, 1960
TfiI GAWTC 5 cut(s) 69, 661, 860, 1633, 2080
Tru1I TTAA 4 cut(s) 1703, 1713, 1836, 2024
Tru9I TTAA 4 cut(s) 1703, 1713, 1836, 2024
TscAI CASTG 5 cut(s) 870, 1091, 1299, 1687, 2118
TseFI GTSAC 4 cut(s) 118, 688, 1645, 1676
TseI GCWGC 7 cut(s) 12, 15, 794, 959, 1382, 2058, 2139
Tsp45I GTSAC 4 cut(s) 118, 688, 1645, 1676
TspDTI ATGAA 7 cut(s) 16, 486, 1023, 1341, 1844, 2042, 2176
TspRI CASTG 5 cut(s) 870, 1091, 1299, 1687, 2118
Van91I CCANNNNNTGG 1 cut(s) 1854
VpaK11BI GGWCC 1 cut(s) 394
XapI RAATTY 5 cut(s) 502, 595, 1246, 1549, 1891
XceI RCATGY 6 cut(s) 289, 1371, 1674, 1978, 1982, 2093
XmiI GTMKAC 2 cut(s) 160, 521
XspI CTAG 1 cut(s) 512
Zsp2I ATGCAT 1 cut(s) 1980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.