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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G04480 AT5G35870 |
| fragaria_vesca | FvH4_6g40610 FvH4_6g40610 FvH4_6g40610 FvH4_6g40610 FvH4_6g40610 |
| malus_domestica | MD09G1126800.v1.1 MD17G1117100.v1.1 |
| prunus_persica | Prupe.3G197400_v2.0.a1 Prupe.3G197400_v2.0.a1 Prupe.4G242400_v2.0.a1 |
| pyrus_communis | pycom03g13770 pycom09g05100 pycom17g10770 |
| rosa_chinensis | RchiOBHm_Chr2g0155981 |
| rosa_laevigata | RLG00000013745 |
| rosa_multiflora | Rmu_sc0000260.1_g000027 Rmu_sc0002072.1_g000028 Rmu_sc0004623.1_g000009 Rmu_sc0007269.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00033680 Rroxscaffold_2G00093320 Rroxscaffold_7G00188500 |
| rosa_rugosa | Rorug02G0451000 Rorug05G0580200 |
| rosa_samantha | Rh1BG329200 Rh1CG342900 Rh1DG359500 Rh1DG360200 Rh2AG517600 Rh2BG528900 Rh2CG502300 Rh2DG538000 Rh6AG145600 Rh7AG259400 Rh7BG008800 Rh7CG276300 |
| rosa_wichuraiana | Rw2G024070 Rw2G042620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 442 |
| AclWI | GGATC | 2 cut(s) | 441, 676 |
| AcoI | YGGCCR | 1 cut(s) | 413 |
| AcuI | CTGAAG | 2 cut(s) | 37, 420 |
| AfaI | GTAC | 2 cut(s) | 295, 405 |
| AflIII | ACRYGT | 1 cut(s) | 182 |
| AgsI | TTSAA | 8 cut(s) | 10, 23, 224, 284, 339, 650, 684, 698 |
| AluBI | AGCT | 2 cut(s) | 620, 701 |
| AluI | AGCT | 2 cut(s) | 620, 701 |
| Alw26I | GTCTC | 1 cut(s) | 417 |
| AlwI | GGATC | 2 cut(s) | 441, 676 |
| Aor13HI | TCCGGA | 1 cut(s) | 442 |
| AoxI | GGCC | 2 cut(s) | 413, 582 |
| ApeKI | GCWGC | 3 cut(s) | 260, 323, 553 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 401, 433 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 234 |
| AsuHPI | GGTGA | 1 cut(s) | 515 |
| BalI | TGGCCA | 1 cut(s) | 415 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 247, 279 |
| BbvI | GCAGC | 3 cut(s) | 247, 335, 565 |
| BccI | CCATC | 3 cut(s) | 143, 470, 548 |
| BclI | TGATCA | 1 cut(s) | 517 |
| BcoDI | GTCTC | 1 cut(s) | 417 |
| BfmI | CTRYAG | 2 cut(s) | 150, 551 |
| BisI | GCNGC | 3 cut(s) | 261, 324, 554 |
| BlsI | GCNGC | 3 cut(s) | 262, 325, 555 |
| BmcAI | AGTACT | 1 cut(s) | 405 |
| BmiI | GGNNCC | 1 cut(s) | 460 |
| BpuEI | CTTGAG | 1 cut(s) | 230 |
| BsaJI | CCNNGG | 1 cut(s) | 663 |
| BsaWI | WCCGGW | 2 cut(s) | 442, 500 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 414, 444 |
| Bse1I | ACTGG | 2 cut(s) | 387, 416 |
| BseAI | TCCGGA | 1 cut(s) | 442 |
| BseDI | CCNNGG | 1 cut(s) | 663 |
| BseGI | GGATG | 1 cut(s) | 383 |
| BseMII | CTCAG | 2 cut(s) | 465, 612 |
| BseNI | ACTGG | 2 cut(s) | 387, 416 |
| BseXI | GCAGC | 3 cut(s) | 247, 335, 565 |
| BshFI | GGCC | 2 cut(s) | 415, 584 |
| BsiSI | CCGG | 2 cut(s) | 443, 501 |
| BslFI | GGGAC | 1 cut(s) | 407 |
| BsmAI | GTCTC | 1 cut(s) | 417 |
| BsmFI | GGGAC | 1 cut(s) | 407 |
| BsnI | GGCC | 2 cut(s) | 415, 584 |
| Bsp13I | TCCGGA | 1 cut(s) | 442 |
| Bsp143I | GATC | 5 cut(s) | 25, 433, 517, 624, 668 |
| Bsp19I | CCATGG | 1 cut(s) | 663 |
| BspANI | GGCC | 2 cut(s) | 415, 584 |
| BspCNI | CTCAG | 2 cut(s) | 464, 613 |
| BspEI | TCCGGA | 1 cut(s) | 442 |
| BspHI | TCATGA | 1 cut(s) | 520 |
| BspLI | GGNNCC | 1 cut(s) | 460 |
| BspMAI | CTGCAG | 1 cut(s) | 555 |
| BspPI | GGATC | 2 cut(s) | 441, 676 |
| BsrI | ACTGG | 2 cut(s) | 387, 416 |
| BssECI | CCNNGG | 1 cut(s) | 663 |
| BssMI | GATC | 5 cut(s) | 25, 433, 517, 624, 668 |
| BssT1I | CCWWGG | 1 cut(s) | 663 |
| Bst4CI | ACNGT | 2 cut(s) | 165, 458 |
| Bst6I | CTCTTC | 2 cut(s) | 219, 528 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 362 |
| BstC8I | GCNNGC | 1 cut(s) | 367 |
| BstDEI | CTNAG | 3 cut(s) | 451, 616, 621 |
| BstDSI | CCRYGG | 1 cut(s) | 663 |
| BstF5I | GGATG | 1 cut(s) | 383 |
| BstKTI | GATC | 5 cut(s) | 28, 436, 520, 627, 671 |
| BstMAI | GTCTC | 1 cut(s) | 417 |
| BstMBI | GATC | 5 cut(s) | 25, 433, 517, 624, 668 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 362 |
| BstNSI | RCATGY | 2 cut(s) | 186, 369 |
| BstSFI | CTRYAG | 2 cut(s) | 150, 551 |
| BstV1I | GCAGC | 3 cut(s) | 247, 335, 565 |
| BstX2I | RGATCY | 1 cut(s) | 668 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 319 |
| BstYI | RGATCY | 1 cut(s) | 668 |
| BsuRI | GGCC | 2 cut(s) | 415, 584 |
| BtgI | CCRYGG | 1 cut(s) | 663 |
| BtsCI | GGATG | 1 cut(s) | 383 |
| BtsIMutI | CAGTG | 1 cut(s) | 394 |
| Cac8I | GCNNGC | 1 cut(s) | 367 |
| CciI | TCATGA | 1 cut(s) | 520 |
| Csp6I | GTAC | 2 cut(s) | 294, 404 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 51, 86 |
| CviAII | CATG | 4 cut(s) | 183, 366, 521, 664 |
| CviJI | RGCY | 8 cut(s) | 35, 120, 308, 415, 480, 584, 620, 701 |
| CviKI_1 | RGCY | 8 cut(s) | 35, 120, 308, 415, 480, 584, 620, 701 |
| CviQI | GTAC | 2 cut(s) | 294, 404 |
| DdeI | CTNAG | 3 cut(s) | 451, 616, 621 |
| DpnI | GATC | 5 cut(s) | 27, 435, 519, 626, 670 |
| DpnII | GATC | 5 cut(s) | 25, 433, 517, 624, 668 |
| EaeI | YGGCCR | 1 cut(s) | 413 |
| Eam1104I | CTCTTC | 2 cut(s) | 219, 528 |
| EarI | CTCTTC | 2 cut(s) | 219, 528 |
| Eco130I | CCWWGG | 1 cut(s) | 663 |
| Eco32I | GATATC | 1 cut(s) | 492 |
| Eco57I | CTGAAG | 2 cut(s) | 37, 420 |
| EcoRV | GATATC | 1 cut(s) | 492 |
| EcoT14I | CCWWGG | 1 cut(s) | 663 |
| ErhI | CCWWGG | 1 cut(s) | 663 |
| FaeI | CATG | 4 cut(s) | 186, 369, 524, 667 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 222, 254 |
| FaqI | GGGAC | 1 cut(s) | 407 |
| FatI | CATG | 4 cut(s) | 182, 365, 520, 663 |
| FbaI | TGATCA | 1 cut(s) | 517 |
| Fnu4HI | GCNGC | 3 cut(s) | 261, 324, 554 |
| FokI | GGATG | 1 cut(s) | 370 |
| Fsp4HI | GCNGC | 3 cut(s) | 261, 324, 554 |
| GluI | GCNGC | 3 cut(s) | 261, 324, 554 |
| HaeIII | GGCC | 2 cut(s) | 415, 584 |
| HapII | CCGG | 2 cut(s) | 443, 501 |
| Hin1II | CATG | 4 cut(s) | 186, 369, 524, 667 |
| HincII | GTYRAC | 1 cut(s) | 168 |
| HindII | GTYRAC | 1 cut(s) | 168 |
| HindIII | AAGCTT | 1 cut(s) | 699 |
| HinfI | GANTC | 4 cut(s) | 57, 79, 395, 536 |
| HpaII | CCGG | 2 cut(s) | 443, 501 |
| HphI | GGTGA | 1 cut(s) | 515 |
| Hpy166II | GTNNAC | 1 cut(s) | 168 |
| Hpy188I | TCNGA | 5 cut(s) | 56, 247, 400, 454, 469 |
| Hpy188III | TCNNGA | 5 cut(s) | 284, 443, 487, 521, 691 |
| Hpy8I | GTNNAC | 1 cut(s) | 168 |
| HpyAV | CCTTC | 2 cut(s) | 268, 574 |
| HpyCH4III | ACNGT | 2 cut(s) | 165, 458 |
| HpyCH4V | TGCA | 2 cut(s) | 365, 553 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 362 |
| HpyF3I | CTNAG | 3 cut(s) | 451, 616, 621 |
| Hsp92II | CATG | 4 cut(s) | 186, 369, 524, 667 |
| Kpn2I | TCCGGA | 1 cut(s) | 442 |
| Ksp22I | TGATCA | 1 cut(s) | 517 |
| Kzo9I | GATC | 5 cut(s) | 25, 433, 517, 624, 668 |
| LmnI | GCTCC | 1 cut(s) | 91 |
| LpnPI | CCDG | 7 cut(s) | 213, 357, 397, 400, 456, 514, 552 |
| Lsp1109I | GCAGC | 3 cut(s) | 247, 335, 565 |
| MaeIII | GTNAC | 1 cut(s) | 573 |
| MalI | GATC | 5 cut(s) | 27, 435, 519, 626, 670 |
| MboI | GATC | 5 cut(s) | 25, 433, 517, 624, 668 |
| MboII | GAAGA | 8 cut(s) | 35, 43, 130, 169, 236, 542, 545, 647 |
| MflI | RGATCY | 1 cut(s) | 668 |
| MlsI | TGGCCA | 1 cut(s) | 415 |
| MluCI | AATT | 2 cut(s) | 215, 651 |
| MluNI | TGGCCA | 1 cut(s) | 415 |
| MlyI | GAGTC | 2 cut(s) | 389, 545 |
| MmeI | TCCRAC | 1 cut(s) | 616 |
| MnlI | CCTC | 4 cut(s) | 220, 298, 466, 625 |
| Mox20I | TGGCCA | 1 cut(s) | 415 |
| MroI | TCCGGA | 1 cut(s) | 442 |
| MroXI | GAANNNNTTC | 1 cut(s) | 234 |
| MscI | TGGCCA | 1 cut(s) | 415 |
| MseI | TTAA | 1 cut(s) | 240 |
| MslI | CAYNNNNRTG | 1 cut(s) | 662 |
| Msp20I | TGGCCA | 1 cut(s) | 415 |
| MspI | CCGG | 2 cut(s) | 443, 501 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 362 |
| NcoI | CCATGG | 1 cut(s) | 663 |
| NdeII | GATC | 5 cut(s) | 25, 433, 517, 624, 668 |
| NlaIII | CATG | 4 cut(s) | 186, 369, 524, 667 |
| NlaIV | GGNNCC | 1 cut(s) | 460 |
| NmuCI | GTSAC | 1 cut(s) | 573 |
| NspI | RCATGY | 2 cut(s) | 186, 369 |
| PaeI | GCATGC | 1 cut(s) | 369 |
| PagI | TCATGA | 1 cut(s) | 520 |
| PciI | ACATGT | 1 cut(s) | 182 |
| PdmI | GAANNNNTTC | 1 cut(s) | 234 |
| PfeI | GAWTC | 2 cut(s) | 57, 79 |
| PkrI | GCNGC | 3 cut(s) | 262, 325, 555 |
| PleI | GAGTC | 2 cut(s) | 389, 544 |
| PpsI | GAGTC | 2 cut(s) | 389, 544 |
| PscI | ACATGT | 1 cut(s) | 182 |
| PspN4I | GGNNCC | 1 cut(s) | 460 |
| PstI | CTGCAG | 1 cut(s) | 555 |
| PsuI | RGATCY | 1 cut(s) | 668 |
| RsaI | GTAC | 2 cut(s) | 295, 405 |
| RsaNI | GTAC | 2 cut(s) | 294, 404 |
| RseI | CAYNNNNRTG | 1 cut(s) | 662 |
| SaqAI | TTAA | 1 cut(s) | 240 |
| SatI | GCNGC | 3 cut(s) | 261, 324, 554 |
| Sau3AI | GATC | 5 cut(s) | 25, 433, 517, 624, 668 |
| ScaI | AGTACT | 1 cut(s) | 405 |
| SchI | GAGTC | 2 cut(s) | 389, 545 |
| SetI | ASST | 5 cut(s) | 202, 571, 622, 689, 703 |
| SfcI | CTRYAG | 2 cut(s) | 150, 551 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 662 |
| SmlI | CTYRAG | 1 cut(s) | 209 |
| SmoI | CTYRAG | 1 cut(s) | 209 |
| SphI | GCATGC | 1 cut(s) | 369 |
| Sse9I | AATT | 2 cut(s) | 215, 651 |
| SspI | AATATT | 1 cut(s) | 509 |
| StyI | CCWWGG | 1 cut(s) | 663 |
| TaaI | ACNGT | 2 cut(s) | 165, 458 |
| TaqI | TCGA | 2 cut(s) | 486, 690 |
| TasI | AATT | 2 cut(s) | 215, 651 |
| TatI | WGTACW | 1 cut(s) | 403 |
| TfiI | GAWTC | 2 cut(s) | 57, 79 |
| Tru1I | TTAA | 1 cut(s) | 240 |
| Tru9I | TTAA | 1 cut(s) | 240 |
| TscAI | CASTG | 1 cut(s) | 394 |
| TseFI | GTSAC | 1 cut(s) | 573 |
| TseI | GCWGC | 3 cut(s) | 260, 323, 553 |
| Tsp45I | GTSAC | 1 cut(s) | 573 |
| TspRI | CASTG | 1 cut(s) | 394 |
| XceI | RCATGY | 2 cut(s) | 186, 369 |
| XmnI | GAANNNNTTC | 1 cut(s) | 234 |
| ZrmI | AGTACT | 1 cut(s) | 405 |