ankyrin repeat
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G07840 AT5G61230 |
| fragaria_vesca | FvH4_5g24200 FvH4_6g43270 |
| malus_domestica | MD00G1078600.v1.1 MD06G1017600.v1.1 |
| prunus_persica | Prupe.5G018400_v2.0.a1 |
| pyrus_communis | pycom06g01430 pycom16g25570 |
| rosa_chinensis | RchiOBHm_Chr2g0159541 RchiOBHm_Chr7g0214011 |
| rosa_laevigata | RLG00000002764 RLG00000021164 |
| rosa_multiflora | Rmu_sc0004260.1_g000002 Rmu_sc0009579.1_g000008 Rmu_sc0012414.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00245590 |
| rosa_rugosa | Rorug02G0476700 Rorug07G0145200 |
| rosa_samantha | Rh2AG543600 Rh2AG544000 Rh2BG556700 Rh2CG526900 Rh2DG565700 Rh7AG278700 Rh7BG272100 Rh7CG297600 Rh7DG284300 |
| rosa_wichuraiana | Rw2G044960 Rw7G023970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 8 cut(s) | 118, 145, 231, 312, 321, 344, 484, 491 |
| AcoI | YGGCCR | 2 cut(s) | 64, 241 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 36 |
| AflIII | ACRYGT | 1 cut(s) | 185 |
| AgeI | ACCGGT | 1 cut(s) | 303 |
| AgsI | TTSAA | 1 cut(s) | 251 |
| AluBI | AGCT | 1 cut(s) | 519 |
| AluI | AGCT | 1 cut(s) | 519 |
| Alw21I | GWGCWC | 1 cut(s) | 521 |
| Alw26I | GTCTC | 2 cut(s) | 34, 461 |
| AoxI | GGCC | 2 cut(s) | 64, 241 |
| AsiGI | ACCGGT | 1 cut(s) | 303 |
| AspS9I | GGNCC | 1 cut(s) | 57 |
| AsuHPI | GGTGA | 4 cut(s) | 137, 151, 205, 215 |
| AvaII | GGWCC | 1 cut(s) | 57 |
| BalI | TGGCCA | 2 cut(s) | 66, 243 |
| BanII | GRGCYC | 1 cut(s) | 521 |
| Bbv12I | GWGCWC | 1 cut(s) | 521 |
| BccI | CCATC | 1 cut(s) | 87 |
| BclI | TGATCA | 1 cut(s) | 12 |
| BcoDI | GTCTC | 2 cut(s) | 34, 461 |
| BfaI | CTAG | 3 cut(s) | 167, 204, 294 |
| BisI | GCNGC | 6 cut(s) | 118, 146, 231, 322, 345, 485 |
| BlsI | GCNGC | 6 cut(s) | 119, 147, 232, 323, 346, 486 |
| Bme18I | GGWCC | 1 cut(s) | 57 |
| BmgT120I | GGNCC | 1 cut(s) | 57 |
| BmiI | GGNNCC | 2 cut(s) | 59, 73 |
| BmsI | GCATC | 1 cut(s) | 280 |
| BpmI | CTGGAG | 1 cut(s) | 443 |
| BsaI | GGTCTC | 1 cut(s) | 461 |
| BsaJI | CCNNGG | 3 cut(s) | 61, 67, 451 |
| BsaWI | WCCGGW | 1 cut(s) | 303 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 36 |
| Bse118I | RCCGGY | 1 cut(s) | 303 |
| Bse1I | ACTGG | 1 cut(s) | 460 |
| BseDI | CCNNGG | 3 cut(s) | 61, 67, 451 |
| BseGI | GGATG | 3 cut(s) | 88, 98, 265 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 36 |
| BseNI | ACTGG | 1 cut(s) | 460 |
| BseRI | GAGGAG | 4 cut(s) | 321, 370, 373, 488 |
| BshFI | GGCC | 2 cut(s) | 66, 243 |
| BshTI | ACCGGT | 1 cut(s) | 303 |
| BsiHKAI | GWGCWC | 1 cut(s) | 521 |
| BsiSI | CCGG | 1 cut(s) | 304 |
| BslFI | GGGAC | 1 cut(s) | 43 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 36 |
| BsmAI | GTCTC | 2 cut(s) | 34, 461 |
| BsmFI | GGGAC | 1 cut(s) | 43 |
| BsnI | GGCC | 2 cut(s) | 66, 243 |
| Bso31I | GGTCTC | 1 cut(s) | 461 |
| Bsp1286I | GDGCHC | 1 cut(s) | 521 |
| Bsp143I | GATC | 2 cut(s) | 12, 127 |
| Bsp19I | CCATGG | 3 cut(s) | 61, 67, 451 |
| BspACI | CCGC | 8 cut(s) | 118, 145, 231, 312, 321, 344, 484, 491 |
| BspANI | GGCC | 2 cut(s) | 66, 243 |
| BspLI | GGNNCC | 2 cut(s) | 59, 73 |
| BspQI | GCTCTTC | 1 cut(s) | 509 |
| BspTNI | GGTCTC | 1 cut(s) | 461 |
| BsrFI | RCCGGY | 1 cut(s) | 303 |
| BsrI | ACTGG | 1 cut(s) | 460 |
| BssAI | RCCGGY | 1 cut(s) | 303 |
| BssECI | CCNNGG | 3 cut(s) | 61, 67, 451 |
| BssMI | GATC | 2 cut(s) | 12, 127 |
| BssT1I | CCWWGG | 3 cut(s) | 61, 67, 451 |
| Bst6I | CTCTTC | 3 cut(s) | 225, 339, 509 |
| BstC8I | GCNNGC | 2 cut(s) | 76, 319 |
| BstDSI | CCRYGG | 3 cut(s) | 61, 67, 451 |
| BstEII | GGTNACC | 1 cut(s) | 211 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 34 |
| BstF5I | GGATG | 3 cut(s) | 88, 98, 265 |
| BstKTI | GATC | 2 cut(s) | 15, 130 |
| BstMAI | GTCTC | 2 cut(s) | 34, 461 |
| BstMBI | GATC | 2 cut(s) | 12, 127 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 318, 490 |
| BstNSI | RCATGY | 2 cut(s) | 189, 415 |
| BstPI | GGTNACC | 1 cut(s) | 211 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 68 |
| BsuRI | GGCC | 2 cut(s) | 66, 243 |
| BtgI | CCRYGG | 3 cut(s) | 61, 67, 451 |
| BtsCI | GGATG | 3 cut(s) | 88, 98, 265 |
| BtsI | GCAGTG | 2 cut(s) | 375, 437 |
| BtsIMutI | CAGTG | 3 cut(s) | 375, 437, 467 |
| Cac8I | GCNNGC | 2 cut(s) | 76, 319 |
| Cfr10I | RCCGGY | 1 cut(s) | 303 |
| Cfr13I | GGNCC | 1 cut(s) | 57 |
| CspAI | ACCGGT | 1 cut(s) | 303 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 95, 130 |
| CviAII | CATG | 9 cut(s) | 62, 68, 79, 186, 245, 256, 412, 416, 452 |
| DpnI | GATC | 2 cut(s) | 14, 129 |
| DpnII | GATC | 2 cut(s) | 12, 127 |
| EaeI | YGGCCR | 2 cut(s) | 64, 241 |
| Eam1104I | CTCTTC | 3 cut(s) | 225, 339, 509 |
| EarI | CTCTTC | 3 cut(s) | 225, 339, 509 |
| Ecl136II | GAGCTC | 1 cut(s) | 519 |
| Eco130I | CCWWGG | 3 cut(s) | 61, 67, 451 |
| Eco24I | GRGCYC | 1 cut(s) | 521 |
| Eco31I | GGTCTC | 1 cut(s) | 461 |
| Eco47I | GGWCC | 1 cut(s) | 57 |
| Eco53kI | GAGCTC | 1 cut(s) | 519 |
| Eco91I | GGTNACC | 1 cut(s) | 211 |
| EcoICRI | GAGCTC | 1 cut(s) | 519 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 34 |
| EcoO109I | RGGNCCY | 1 cut(s) | 57 |
| EcoO65I | GGTNACC | 1 cut(s) | 211 |
| EcoT14I | CCWWGG | 3 cut(s) | 61, 67, 451 |
| EcoT22I | ATGCAT | 1 cut(s) | 417 |
| EcoT38I | GRGCYC | 1 cut(s) | 521 |
| ErhI | CCWWGG | 3 cut(s) | 61, 67, 451 |
| FaeI | CATG | 9 cut(s) | 65, 71, 82, 189, 248, 259, 415, 419, 455 |
| FaqI | GGGAC | 1 cut(s) | 43 |
| FatI | CATG | 9 cut(s) | 61, 67, 78, 185, 244, 255, 411, 415, 451 |
| FbaI | TGATCA | 1 cut(s) | 12 |
| Fnu4HI | GCNGC | 6 cut(s) | 118, 146, 231, 322, 345, 485 |
| FokI | GGATG | 3 cut(s) | 95, 105, 272 |
| FriOI | GRGCYC | 1 cut(s) | 521 |
| Fsp4HI | GCNGC | 6 cut(s) | 118, 146, 231, 322, 345, 485 |
| FspBI | CTAG | 3 cut(s) | 167, 204, 294 |
| GluI | GCNGC | 6 cut(s) | 118, 146, 231, 322, 345, 485 |
| GsuI | CTGGAG | 1 cut(s) | 443 |
| HaeIII | GGCC | 2 cut(s) | 66, 243 |
| HapII | CCGG | 1 cut(s) | 304 |
| Hin1II | CATG | 9 cut(s) | 65, 71, 82, 189, 248, 259, 415, 419, 455 |
| HinfI | GANTC | 2 cut(s) | 97, 328 |
| HpaII | CCGG | 1 cut(s) | 304 |
| HphI | GGTGA | 4 cut(s) | 137, 151, 205, 215 |
| Hpy188I | TCNGA | 1 cut(s) | 532 |
| Hpy188III | TCNNGA | 2 cut(s) | 152, 204 |
| Hpy99I | CGWCG | 1 cut(s) | 158 |
| HpyAV | CCTTC | 1 cut(s) | 230 |
| HpyCH4V | TGCA | 3 cut(s) | 415, 442, 525 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 318, 490 |
| Hsp92II | CATG | 9 cut(s) | 65, 71, 82, 189, 248, 259, 415, 419, 455 |
| Ksp22I | TGATCA | 1 cut(s) | 12 |
| Kzo9I | GATC | 2 cut(s) | 12, 127 |
| LguI | GCTCTTC | 1 cut(s) | 509 |
| LmnI | GCTCC | 1 cut(s) | 71 |
| LpnPI | CCDG | 7 cut(s) | 88, 310, 317, 365, 417, 473, 495 |
| LweI | GCATC | 1 cut(s) | 280 |
| MaeI | CTAG | 3 cut(s) | 167, 204, 294 |
| MaeIII | GTNAC | 2 cut(s) | 194, 211 |
| MalI | GATC | 2 cut(s) | 14, 129 |
| MboI | GATC | 2 cut(s) | 12, 127 |
| MboII | GAAGA | 3 cut(s) | 212, 326, 526 |
| MhlI | GDGCHC | 1 cut(s) | 521 |
| MlsI | TGGCCA | 2 cut(s) | 66, 243 |
| MluNI | TGGCCA | 2 cut(s) | 66, 243 |
| MlyI | GAGTC | 2 cut(s) | 91, 322 |
| Mox20I | TGGCCA | 2 cut(s) | 66, 243 |
| Mph1103I | ATGCAT | 1 cut(s) | 417 |
| MscI | TGGCCA | 2 cut(s) | 66, 243 |
| MseI | TTAA | 1 cut(s) | 429 |
| MslI | CAYNNNNRTG | 1 cut(s) | 66 |
| Msp20I | TGGCCA | 2 cut(s) | 66, 243 |
| MspI | CCGG | 1 cut(s) | 304 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 318, 490 |
| NcoI | CCATGG | 3 cut(s) | 61, 67, 451 |
| NdeII | GATC | 2 cut(s) | 12, 127 |
| NlaIII | CATG | 9 cut(s) | 65, 71, 82, 189, 248, 259, 415, 419, 455 |
| NlaIV | GGNNCC | 2 cut(s) | 59, 73 |
| NmuCI | GTSAC | 2 cut(s) | 194, 211 |
| NsiI | ATGCAT | 1 cut(s) | 417 |
| NspI | RCATGY | 2 cut(s) | 189, 415 |
| PciI | ACATGT | 1 cut(s) | 185 |
| PciSI | GCTCTTC | 1 cut(s) | 509 |
| PinAI | ACCGGT | 1 cut(s) | 303 |
| PkrI | GCNGC | 6 cut(s) | 119, 147, 232, 323, 346, 486 |
| PleI | GAGTC | 2 cut(s) | 91, 322 |
| PpsI | GAGTC | 2 cut(s) | 91, 322 |
| PpuMI | RGGWCCY | 1 cut(s) | 57 |
| PscI | ACATGT | 1 cut(s) | 185 |
| Psp124BI | GAGCTC | 1 cut(s) | 521 |
| Psp5II | RGGWCCY | 1 cut(s) | 57 |
| PspEI | GGTNACC | 1 cut(s) | 211 |
| PspN4I | GGNNCC | 2 cut(s) | 59, 73 |
| PspPI | GGNCC | 1 cut(s) | 57 |
| PspPPI | RGGWCCY | 1 cut(s) | 57 |
| RseI | CAYNNNNRTG | 1 cut(s) | 66 |
| SacI | GAGCTC | 1 cut(s) | 521 |
| SapI | GCTCTTC | 1 cut(s) | 509 |
| SaqAI | TTAA | 1 cut(s) | 429 |
| SatI | GCNGC | 6 cut(s) | 118, 146, 231, 322, 345, 485 |
| Sau3AI | GATC | 2 cut(s) | 12, 127 |
| Sau96I | GGNCC | 1 cut(s) | 57 |
| SchI | GAGTC | 2 cut(s) | 91, 322 |
| SduI | GDGCHC | 1 cut(s) | 521 |
| SetI | ASST | 9 cut(s) | 32, 59, 141, 228, 241, 428, 503, 521, 539 |
| SfaNI | GCATC | 1 cut(s) | 280 |
| SinI | GGWCC | 1 cut(s) | 57 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 66 |
| SsiI | CCGC | 8 cut(s) | 118, 145, 231, 312, 321, 344, 484, 491 |
| SspMI | CTAG | 3 cut(s) | 167, 204, 294 |
| SstI | GAGCTC | 1 cut(s) | 521 |
| StyI | CCWWGG | 3 cut(s) | 61, 67, 451 |
| TaqI | TCGA | 2 cut(s) | 47, 153 |
| TauI | GCSGC | 6 cut(s) | 120, 148, 233, 324, 347, 487 |
| Tru1I | TTAA | 1 cut(s) | 429 |
| Tru9I | TTAA | 1 cut(s) | 429 |
| TscAI | CASTG | 3 cut(s) | 375, 444, 467 |
| TseFI | GTSAC | 2 cut(s) | 194, 211 |
| Tsp45I | GTSAC | 2 cut(s) | 194, 211 |
| TspDTI | ATGAA | 2 cut(s) | 260, 494 |
| TspRI | CASTG | 3 cut(s) | 375, 444, 467 |
| VpaK11BI | GGWCC | 1 cut(s) | 57 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 34 |
| XbaI | TCTAGA | 1 cut(s) | 203 |
| XceI | RCATGY | 2 cut(s) | 189, 415 |
| XspI | CTAG | 3 cut(s) | 167, 204, 294 |
| Zsp2I | ATGCAT | 1 cut(s) | 417 |