ankyrin repeat
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G07840 AT5G61230 |
| fragaria_vesca | FvH4_5g24200 FvH4_6g43270 |
| malus_domestica | MD00G1078600.v1.1 MD06G1017600.v1.1 |
| prunus_persica | Prupe.5G018400_v2.0.a1 |
| pyrus_communis | pycom06g01430 pycom16g25570 |
| rosa_chinensis | RchiOBHm_Chr2g0159541 RchiOBHm_Chr7g0214011 |
| rosa_laevigata | RLG00000002764 RLG00000021164 |
| rosa_multiflora | Rmu_sc0004260.1_g000002 Rmu_sc0009579.1_g000008 Rmu_sc0012414.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00245590 |
| rosa_rugosa | Rorug02G0476700 Rorug07G0145200 |
| rosa_samantha | Rh2AG543600 Rh2AG544000 Rh2BG556700 Rh2CG526900 Rh2DG565700 Rh7AG278700 Rh7BG272100 Rh7CG297600 Rh7DG284300 |
| rosa_wichuraiana | Rw2G044960 Rw7G023970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 16, 34, 296 |
| AcoI | YGGCCR | 1 cut(s) | 214 |
| AcuI | CTGAAG | 1 cut(s) | 437 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 223, 318 |
| AjnI | CCWGG | 1 cut(s) | 415 |
| AluBI | AGCT | 6 cut(s) | 21, 203, 457, 483, 492, 501 |
| AluI | AGCT | 6 cut(s) | 21, 203, 457, 483, 492, 501 |
| Alw21I | GWGCWC | 1 cut(s) | 485 |
| AoxI | GGCC | 1 cut(s) | 214 |
| ApeKI | GCWGC | 3 cut(s) | 158, 203, 308 |
| AspS9I | GGNCC | 1 cut(s) | 167 |
| AsuHPI | GGTGA | 3 cut(s) | 116, 130, 188 |
| AvaII | GGWCC | 1 cut(s) | 167 |
| BalI | TGGCCA | 1 cut(s) | 216 |
| BanII | GRGCYC | 1 cut(s) | 485 |
| BbsI | GAAGAC | 1 cut(s) | 443 |
| Bbv12I | GWGCWC | 1 cut(s) | 485 |
| BbvCI | CCTCAGC | 1 cut(s) | 207 |
| BbvI | GCAGC | 3 cut(s) | 145, 190, 320 |
| BccI | CCATC | 2 cut(s) | 66, 225 |
| BceAI | ACGGC | 1 cut(s) | 317 |
| BciT130I | CCWGG | 1 cut(s) | 417 |
| BfaI | CTAG | 2 cut(s) | 200, 458 |
| BfmI | CTRYAG | 1 cut(s) | 385 |
| BisI | GCNGC | 3 cut(s) | 159, 204, 309 |
| BlsI | GCNGC | 3 cut(s) | 160, 205, 310 |
| Bme1390I | CCNGG | 1 cut(s) | 417 |
| Bme18I | GGWCC | 1 cut(s) | 167 |
| BmgT120I | GGNCC | 1 cut(s) | 167 |
| BmiI | GGNNCC | 1 cut(s) | 168 |
| BmrFI | CCNGG | 1 cut(s) | 417 |
| BmsI | GCATC | 2 cut(s) | 253, 476 |
| BpiI | GAAGAC | 1 cut(s) | 443 |
| BpmI | CTGGAG | 1 cut(s) | 242 |
| Bpu10I | CCTNAGC | 2 cut(s) | 11, 207 |
| BpuEI | CTTGAG | 2 cut(s) | 263, 443 |
| BsaJI | CCNNGG | 1 cut(s) | 415 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 223, 318 |
| BseBI | CCWGG | 1 cut(s) | 417 |
| BseDI | CCNNGG | 1 cut(s) | 415 |
| BseGI | GGATG | 4 cut(s) | 67, 77, 151, 238 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 223, 318 |
| BseMII | CTCAG | 1 cut(s) | 198 |
| BseRI | GAGGAG | 3 cut(s) | 334, 337, 452 |
| BseXI | GCAGC | 3 cut(s) | 145, 190, 320 |
| BsgI | GTGCAG | 1 cut(s) | 327 |
| Bsh1285I | CGRYCG | 1 cut(s) | 38 |
| BshFI | GGCC | 1 cut(s) | 216 |
| BsiEI | CGRYCG | 1 cut(s) | 38 |
| BsiHKAI | GWGCWC | 1 cut(s) | 485 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 223, 318 |
| BsmI | GAATGC | 1 cut(s) | 359 |
| BsnI | GGCC | 1 cut(s) | 216 |
| Bsp1286I | GDGCHC | 1 cut(s) | 485 |
| Bsp143I | GATC | 1 cut(s) | 106 |
| BspACI | CCGC | 3 cut(s) | 16, 34, 296 |
| BspANI | GGCC | 1 cut(s) | 216 |
| BspCNI | CTCAG | 1 cut(s) | 199 |
| BspLI | GGNNCC | 1 cut(s) | 168 |
| BssECI | CCNNGG | 1 cut(s) | 415 |
| BssMI | GATC | 1 cut(s) | 106 |
| Bst2UI | CCWGG | 1 cut(s) | 417 |
| Bst4CI | ACNGT | 2 cut(s) | 305, 386 |
| Bst6I | CTCTTC | 1 cut(s) | 198 |
| BstDEI | CTNAG | 3 cut(s) | 11, 207, 273 |
| BstF5I | GGATG | 4 cut(s) | 67, 77, 151, 238 |
| BstKTI | GATC | 1 cut(s) | 109 |
| BstMBI | GATC | 1 cut(s) | 106 |
| BstMCI | CGRYCG | 1 cut(s) | 38 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 454, 489, 498 |
| BstNI | CCWGG | 1 cut(s) | 417 |
| BstSCI | CCNGG | 1 cut(s) | 415 |
| BstSFI | CTRYAG | 1 cut(s) | 385 |
| BstV1I | GCAGC | 3 cut(s) | 145, 190, 320 |
| BstV2I | GAAGAC | 1 cut(s) | 443 |
| BsuRI | GGCC | 1 cut(s) | 216 |
| BtsCI | GGATG | 4 cut(s) | 67, 77, 151, 238 |
| BtsIMutI | CAGTG | 1 cut(s) | 310 |
| Cfr13I | GGNCC | 1 cut(s) | 167 |
| CseI | GACGC | 1 cut(s) | 437 |
| DdeI | CTNAG | 3 cut(s) | 11, 207, 273 |
| DpnI | GATC | 1 cut(s) | 108 |
| DpnII | GATC | 1 cut(s) | 106 |
| EaeI | YGGCCR | 1 cut(s) | 214 |
| Eam1104I | CTCTTC | 1 cut(s) | 198 |
| EarI | CTCTTC | 1 cut(s) | 198 |
| EciI | GGCGGA | 1 cut(s) | 31 |
| Ecl136II | GAGCTC | 1 cut(s) | 483 |
| Eco24I | GRGCYC | 1 cut(s) | 485 |
| Eco47I | GGWCC | 1 cut(s) | 167 |
| Eco53kI | GAGCTC | 1 cut(s) | 483 |
| Eco57I | CTGAAG | 1 cut(s) | 437 |
| EcoICRI | GAGCTC | 1 cut(s) | 483 |
| EcoRII | CCWGG | 1 cut(s) | 415 |
| EcoT38I | GRGCYC | 1 cut(s) | 485 |
| FaiI | YATR | 6 cut(s) | 59, 87, 230, 377, 381, 435 |
| Fnu4HI | GCNGC | 3 cut(s) | 159, 204, 309 |
| FokI | GGATG | 4 cut(s) | 74, 84, 158, 245 |
| FriOI | GRGCYC | 1 cut(s) | 485 |
| Fsp4HI | GCNGC | 3 cut(s) | 159, 204, 309 |
| FspBI | CTAG | 2 cut(s) | 200, 458 |
| GluI | GCNGC | 3 cut(s) | 159, 204, 309 |
| GsuI | CTGGAG | 1 cut(s) | 242 |
| HaeIII | GGCC | 1 cut(s) | 216 |
| HgaI | GACGC | 1 cut(s) | 437 |
| HinfI | GANTC | 2 cut(s) | 76, 292 |
| HphI | GGTGA | 3 cut(s) | 116, 130, 188 |
| Hpy188I | TCNGA | 3 cut(s) | 111, 487, 496 |
| Hpy188III | TCNNGA | 2 cut(s) | 27, 221 |
| HpyAV | CCTTC | 1 cut(s) | 24 |
| HpyCH4III | ACNGT | 2 cut(s) | 305, 386 |
| HpyCH4V | TGCA | 2 cut(s) | 308, 467 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 454, 489, 498 |
| HpyF3I | CTNAG | 3 cut(s) | 11, 207, 273 |
| Kzo9I | GATC | 1 cut(s) | 106 |
| LmnI | GCTCC | 2 cut(s) | 18, 87 |
| Lsp1109I | GCAGC | 3 cut(s) | 145, 190, 320 |
| LweI | GCATC | 2 cut(s) | 253, 476 |
| MaeI | CTAG | 2 cut(s) | 200, 458 |
| MalI | GATC | 1 cut(s) | 108 |
| MboI | GATC | 1 cut(s) | 106 |
| MboII | GAAGA | 2 cut(s) | 185, 443 |
| MhlI | GDGCHC | 1 cut(s) | 485 |
| MlsI | TGGCCA | 1 cut(s) | 216 |
| MluCI | AATT | 1 cut(s) | 236 |
| MluNI | TGGCCA | 1 cut(s) | 216 |
| MlyI | GAGTC | 2 cut(s) | 70, 286 |
| MnlI | CCTC | 9 cut(s) | 130, 201, 202, 217, 312, 315, 318, 408, 430 |
| Mox20I | TGGCCA | 1 cut(s) | 216 |
| MscI | TGGCCA | 1 cut(s) | 216 |
| MseI | TTAA | 2 cut(s) | 132, 393 |
| Msp20I | TGGCCA | 1 cut(s) | 216 |
| MspR9I | CCNGG | 1 cut(s) | 417 |
| Mva1269I | GAATGC | 1 cut(s) | 359 |
| MvaI | CCWGG | 1 cut(s) | 417 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 454, 489, 498 |
| NdeII | GATC | 1 cut(s) | 106 |
| NlaIV | GGNNCC | 1 cut(s) | 168 |
| PctI | GAATGC | 1 cut(s) | 359 |
| PkrI | GCNGC | 3 cut(s) | 160, 205, 310 |
| PleI | GAGTC | 2 cut(s) | 70, 286 |
| PpsI | GAGTC | 2 cut(s) | 70, 286 |
| Psp124BI | GAGCTC | 1 cut(s) | 485 |
| Psp6I | CCWGG | 1 cut(s) | 415 |
| PspGI | CCWGG | 1 cut(s) | 415 |
| PspN4I | GGNNCC | 1 cut(s) | 168 |
| PspPI | GGNCC | 1 cut(s) | 167 |
| SacI | GAGCTC | 1 cut(s) | 485 |
| SaqAI | TTAA | 2 cut(s) | 132, 393 |
| SatI | GCNGC | 3 cut(s) | 159, 204, 309 |
| Sau3AI | GATC | 1 cut(s) | 106 |
| Sau96I | GGNCC | 1 cut(s) | 167 |
| SchI | GAGTC | 2 cut(s) | 70, 286 |
| ScrFI | CCNGG | 1 cut(s) | 417 |
| SduI | GDGCHC | 1 cut(s) | 485 |
| SfaNI | GCATC | 2 cut(s) | 253, 476 |
| SfcI | CTRYAG | 1 cut(s) | 385 |
| SinI | GGWCC | 1 cut(s) | 167 |
| SmlI | CTYRAG | 2 cut(s) | 242, 422 |
| SmoI | CTYRAG | 2 cut(s) | 242, 422 |
| Sse9I | AATT | 1 cut(s) | 236 |
| SsiI | CCGC | 3 cut(s) | 16, 34, 296 |
| SspI | AATATT | 1 cut(s) | 259 |
| SspMI | CTAG | 2 cut(s) | 200, 458 |
| SstI | GAGCTC | 1 cut(s) | 485 |
| StyD4I | CCNGG | 1 cut(s) | 415 |
| TaaI | ACNGT | 2 cut(s) | 305, 386 |
| TaqI | TCGA | 1 cut(s) | 26 |
| TasI | AATT | 1 cut(s) | 236 |
| Tru1I | TTAA | 2 cut(s) | 132, 393 |
| Tru9I | TTAA | 2 cut(s) | 132, 393 |
| TscAI | CASTG | 1 cut(s) | 310 |
| TseI | GCWGC | 3 cut(s) | 158, 203, 308 |
| TspDTI | ATGAA | 2 cut(s) | 249, 458 |
| TspRI | CASTG | 1 cut(s) | 310 |
| VpaK11BI | GGWCC | 1 cut(s) | 167 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 413 |
| XspI | CTAG | 2 cut(s) | 200, 458 |