ankyrin repeat
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G07840 AT5G61230 |
| fragaria_vesca | FvH4_5g24200 FvH4_6g43270 |
| malus_domestica | MD00G1078600.v1.1 MD06G1017600.v1.1 |
| prunus_persica | Prupe.5G018400_v2.0.a1 |
| pyrus_communis | pycom06g01430 pycom16g25570 |
| rosa_chinensis | RchiOBHm_Chr2g0159541 RchiOBHm_Chr7g0214011 |
| rosa_laevigata | RLG00000002764 RLG00000021164 |
| rosa_multiflora | Rmu_sc0004260.1_g000002 Rmu_sc0009579.1_g000008 Rmu_sc0012414.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00245590 |
| rosa_rugosa | Rorug02G0476700 Rorug07G0145200 |
| rosa_samantha | Rh2AG543600 Rh2AG544000 Rh2BG556700 Rh2CG526900 Rh2DG565700 Rh7AG278700 Rh7BG272100 Rh7CG297600 Rh7DG284300 |
| rosa_wichuraiana | Rw2G044960 Rw7G023970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 252 |
| AclWI | GGATC | 2 cut(s) | 519, 532 |
| AcoI | YGGCCR | 2 cut(s) | 55, 238 |
| AcuI | CTGAAG | 3 cut(s) | 251, 470, 489 |
| AcyI | GRCGYC | 1 cut(s) | 249 |
| AfaI | GTAC | 1 cut(s) | 162 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 27 |
| AgsI | TTSAA | 1 cut(s) | 427 |
| AjnI | CCWGG | 1 cut(s) | 153 |
| AluBI | AGCT | 2 cut(s) | 304, 516 |
| AluI | AGCT | 2 cut(s) | 304, 516 |
| Alw21I | GWGCWC | 1 cut(s) | 518 |
| Alw26I | GTCTC | 1 cut(s) | 458 |
| AlwI | GGATC | 2 cut(s) | 519, 532 |
| Ama87I | CYCGRG | 1 cut(s) | 455 |
| AoxI | GGCC | 2 cut(s) | 55, 238 |
| AspS9I | GGNCC | 1 cut(s) | 48 |
| AsuHPI | GGTGA | 3 cut(s) | 148, 202, 212 |
| AvaI | CYCGRG | 1 cut(s) | 455 |
| AvaII | GGWCC | 1 cut(s) | 48 |
| BalI | TGGCCA | 1 cut(s) | 57 |
| BamHI | GGATCC | 1 cut(s) | 524 |
| BanII | GRGCYC | 1 cut(s) | 518 |
| Bbv12I | GWGCWC | 1 cut(s) | 518 |
| BccI | CCATC | 1 cut(s) | 84 |
| BceAI | ACGGC | 1 cut(s) | 497 |
| BciT130I | CCWGG | 1 cut(s) | 155 |
| BclI | TGATCA | 1 cut(s) | 3 |
| BcoDI | GTCTC | 1 cut(s) | 458 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 120 |
| BisI | GCNGC | 6 cut(s) | 115, 143, 228, 238, 319, 342 |
| BlsI | GCNGC | 6 cut(s) | 116, 144, 229, 239, 320, 343 |
| Bme1390I | CCNGG | 1 cut(s) | 155 |
| Bme18I | GGWCC | 1 cut(s) | 48 |
| BmeT110I | CYCGRG | 1 cut(s) | 455 |
| BmgT120I | GGNCC | 1 cut(s) | 48 |
| BmiI | GGNNCC | 2 cut(s) | 64, 526 |
| BmrFI | CCNGG | 1 cut(s) | 155 |
| BmsI | GCATC | 1 cut(s) | 277 |
| BsaHI | GRCGYC | 1 cut(s) | 249 |
| BsaI | GGTCTC | 1 cut(s) | 458 |
| BsaJI | CCNNGG | 3 cut(s) | 58, 154, 448 |
| BsaWI | WCCGGW | 1 cut(s) | 50 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 27 |
| Bse1I | ACTGG | 2 cut(s) | 168, 401 |
| Bse3DI | GCAATG | 1 cut(s) | 372 |
| BseBI | CCWGG | 1 cut(s) | 155 |
| BseDI | CCNNGG | 3 cut(s) | 58, 154, 448 |
| BseGI | GGATG | 4 cut(s) | 79, 95, 172, 262 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 27 |
| BseMI | GCAATG | 1 cut(s) | 372 |
| BseNI | ACTGG | 2 cut(s) | 168, 401 |
| BseRI | GAGGAG | 2 cut(s) | 367, 370 |
| BseYI | CCCAGC | 1 cut(s) | 304 |
| BshFI | GGCC | 2 cut(s) | 57, 240 |
| BsiHKAI | GWGCWC | 1 cut(s) | 518 |
| BsiHKCI | CYCGRG | 1 cut(s) | 455 |
| BsiSI | CCGG | 1 cut(s) | 51 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 27 |
| BsmAI | GTCTC | 1 cut(s) | 458 |
| BsnI | GGCC | 2 cut(s) | 57, 240 |
| Bso31I | GGTCTC | 1 cut(s) | 458 |
| BsoBI | CYCGRG | 1 cut(s) | 455 |
| Bsp1286I | GDGCHC | 1 cut(s) | 518 |
| Bsp143I | GATC | 3 cut(s) | 3, 124, 524 |
| Bsp19I | CCATGG | 1 cut(s) | 58 |
| BspANI | GGCC | 2 cut(s) | 57, 240 |
| BspLI | GGNNCC | 2 cut(s) | 64, 526 |
| BspPI | GGATC | 2 cut(s) | 519, 532 |
| BspTNI | GGTCTC | 1 cut(s) | 458 |
| BsrDI | GCAATG | 1 cut(s) | 372 |
| BsrI | ACTGG | 2 cut(s) | 168, 401 |
| BssECI | CCNNGG | 3 cut(s) | 58, 154, 448 |
| BssMI | GATC | 3 cut(s) | 3, 124, 524 |
| BssNI | GRCGYC | 1 cut(s) | 249 |
| BssT1I | CCWWGG | 1 cut(s) | 58 |
| Bst2UI | CCWGG | 1 cut(s) | 155 |
| Bst6I | CTCTTC | 1 cut(s) | 222 |
| BstACI | GRCGYC | 1 cut(s) | 249 |
| BstC8I | GCNNGC | 2 cut(s) | 67, 316 |
| BstDSI | CCRYGG | 1 cut(s) | 58 |
| BstEII | GGTNACC | 1 cut(s) | 208 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 25 |
| BstF5I | GGATG | 4 cut(s) | 79, 95, 172, 262 |
| BstKTI | GATC | 3 cut(s) | 6, 127, 527 |
| BstMAI | GTCTC | 1 cut(s) | 458 |
| BstMBI | GATC | 3 cut(s) | 3, 124, 524 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 120, 315 |
| BstNI | CCWGG | 1 cut(s) | 155 |
| BstNSI | RCATGY | 2 cut(s) | 186, 412 |
| BstPI | GGTNACC | 1 cut(s) | 208 |
| BstSCI | CCNGG | 1 cut(s) | 153 |
| BstX2I | RGATCY | 1 cut(s) | 524 |
| BstYI | RGATCY | 1 cut(s) | 524 |
| BsuRI | GGCC | 2 cut(s) | 57, 240 |
| BtgI | CCRYGG | 1 cut(s) | 58 |
| BtsCI | GGATG | 4 cut(s) | 79, 95, 172, 262 |
| Cac8I | GCNNGC | 2 cut(s) | 67, 316 |
| Cfr13I | GGNCC | 1 cut(s) | 48 |
| Csp6I | GTAC | 1 cut(s) | 161 |
| CviAII | CATG | 8 cut(s) | 59, 70, 183, 242, 253, 409, 413, 475 |
| CviQI | GTAC | 1 cut(s) | 161 |
| DpnI | GATC | 3 cut(s) | 5, 126, 526 |
| DpnII | GATC | 3 cut(s) | 3, 124, 524 |
| EaeI | YGGCCR | 2 cut(s) | 55, 238 |
| Eam1104I | CTCTTC | 1 cut(s) | 222 |
| EarI | CTCTTC | 1 cut(s) | 222 |
| Ecl136II | GAGCTC | 1 cut(s) | 516 |
| Eco130I | CCWWGG | 1 cut(s) | 58 |
| Eco24I | GRGCYC | 1 cut(s) | 518 |
| Eco31I | GGTCTC | 1 cut(s) | 458 |
| Eco47I | GGWCC | 1 cut(s) | 48 |
| Eco53kI | GAGCTC | 1 cut(s) | 516 |
| Eco57I | CTGAAG | 3 cut(s) | 251, 470, 489 |
| Eco88I | CYCGRG | 1 cut(s) | 455 |
| Eco91I | GGTNACC | 1 cut(s) | 208 |
| EcoICRI | GAGCTC | 1 cut(s) | 516 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 25 |
| EcoO65I | GGTNACC | 1 cut(s) | 208 |
| EcoRII | CCWGG | 1 cut(s) | 153 |
| EcoT14I | CCWWGG | 1 cut(s) | 58 |
| EcoT22I | ATGCAT | 1 cut(s) | 414 |
| EcoT38I | GRGCYC | 1 cut(s) | 518 |
| ErhI | CCWWGG | 1 cut(s) | 58 |
| FaeI | CATG | 8 cut(s) | 62, 73, 186, 245, 256, 412, 416, 478 |
| FatI | CATG | 8 cut(s) | 58, 69, 182, 241, 252, 408, 412, 474 |
| FbaI | TGATCA | 1 cut(s) | 3 |
| Fnu4HI | GCNGC | 6 cut(s) | 115, 143, 228, 238, 319, 342 |
| FokI | GGATG | 4 cut(s) | 86, 102, 179, 269 |
| FriOI | GRGCYC | 1 cut(s) | 518 |
| Fsp4HI | GCNGC | 6 cut(s) | 115, 143, 228, 238, 319, 342 |
| GluI | GCNGC | 6 cut(s) | 115, 143, 228, 238, 319, 342 |
| GsaI | CCCAGC | 1 cut(s) | 308 |
| HaeIII | GGCC | 2 cut(s) | 57, 240 |
| HapII | CCGG | 1 cut(s) | 51 |
| Hin1I | GRCGYC | 1 cut(s) | 249 |
| Hin1II | CATG | 8 cut(s) | 62, 73, 186, 245, 256, 412, 416, 478 |
| HincII | GTYRAC | 2 cut(s) | 247, 406 |
| HindII | GTYRAC | 2 cut(s) | 247, 406 |
| HinfI | GANTC | 2 cut(s) | 94, 325 |
| HpaII | CCGG | 1 cut(s) | 51 |
| HphI | GGTGA | 3 cut(s) | 148, 202, 212 |
| Hpy166II | GTNNAC | 3 cut(s) | 161, 247, 406 |
| Hpy188I | TCNGA | 2 cut(s) | 8, 529 |
| Hpy188III | TCNNGA | 3 cut(s) | 149, 201, 455 |
| Hpy8I | GTNNAC | 3 cut(s) | 161, 247, 406 |
| HpyCH4IV | ACGT | 2 cut(s) | 105, 249 |
| HpyCH4V | TGCA | 1 cut(s) | 412 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 120, 315 |
| HpySE526I | ACGT | 2 cut(s) | 105, 249 |
| Hsp92I | GRCGYC | 1 cut(s) | 249 |
| Hsp92II | CATG | 8 cut(s) | 62, 73, 186, 245, 256, 412, 416, 478 |
| Ksp22I | TGATCA | 1 cut(s) | 3 |
| Kzo9I | GATC | 3 cut(s) | 3, 124, 524 |
| LmnI | GCTCC | 1 cut(s) | 62 |
| LweI | GCATC | 1 cut(s) | 277 |
| MaeII | ACGT | 2 cut(s) | 105, 249 |
| MaeIII | GTNAC | 1 cut(s) | 208 |
| MalI | GATC | 3 cut(s) | 5, 126, 526 |
| MboI | GATC | 3 cut(s) | 3, 124, 524 |
| MboII | GAAGA | 2 cut(s) | 209, 495 |
| MflI | RGATCY | 1 cut(s) | 524 |
| MhlI | GDGCHC | 1 cut(s) | 518 |
| MlsI | TGGCCA | 1 cut(s) | 57 |
| MluNI | TGGCCA | 1 cut(s) | 57 |
| MlyI | GAGTC | 2 cut(s) | 88, 319 |
| Mox20I | TGGCCA | 1 cut(s) | 57 |
| Mph1103I | ATGCAT | 1 cut(s) | 414 |
| MscI | TGGCCA | 1 cut(s) | 57 |
| Msp20I | TGGCCA | 1 cut(s) | 57 |
| MspA1I | CMGCKG | 1 cut(s) | 304 |
| MspI | CCGG | 1 cut(s) | 51 |
| MspR9I | CCNGG | 1 cut(s) | 155 |
| MvaI | CCWGG | 1 cut(s) | 155 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 120, 315 |
| NcoI | CCATGG | 1 cut(s) | 58 |
| NdeII | GATC | 3 cut(s) | 3, 124, 524 |
| NlaIII | CATG | 8 cut(s) | 62, 73, 186, 245, 256, 412, 416, 478 |
| NlaIV | GGNNCC | 2 cut(s) | 64, 526 |
| NmuCI | GTSAC | 1 cut(s) | 208 |
| NsiI | ATGCAT | 1 cut(s) | 414 |
| NspI | RCATGY | 2 cut(s) | 186, 412 |
| PaeR7I | CTCGAG | 1 cut(s) | 455 |
| PkrI | GCNGC | 6 cut(s) | 116, 144, 229, 239, 320, 343 |
| PleI | GAGTC | 2 cut(s) | 88, 319 |
| PpsI | GAGTC | 2 cut(s) | 88, 319 |
| Psp124BI | GAGCTC | 1 cut(s) | 518 |
| Psp6I | CCWGG | 1 cut(s) | 153 |
| PspEI | GGTNACC | 1 cut(s) | 208 |
| PspFI | CCCAGC | 1 cut(s) | 304 |
| PspGI | CCWGG | 1 cut(s) | 153 |
| PspN4I | GGNNCC | 2 cut(s) | 64, 526 |
| PspPI | GGNCC | 1 cut(s) | 48 |
| PsuI | RGATCY | 1 cut(s) | 524 |
| PvuII | CAGCTG | 1 cut(s) | 304 |
| RsaI | GTAC | 1 cut(s) | 162 |
| RsaNI | GTAC | 1 cut(s) | 161 |
| SacI | GAGCTC | 1 cut(s) | 518 |
| SatI | GCNGC | 6 cut(s) | 115, 143, 228, 238, 319, 342 |
| Sau3AI | GATC | 3 cut(s) | 3, 124, 524 |
| Sau96I | GGNCC | 1 cut(s) | 48 |
| SchI | GAGTC | 2 cut(s) | 88, 319 |
| ScrFI | CCNGG | 1 cut(s) | 155 |
| SduI | GDGCHC | 1 cut(s) | 518 |
| SfaNI | GCATC | 1 cut(s) | 277 |
| Sfr274I | CTCGAG | 1 cut(s) | 455 |
| SinI | GGWCC | 1 cut(s) | 48 |
| SlaI | CTCGAG | 1 cut(s) | 455 |
| SmlI | CTYRAG | 1 cut(s) | 455 |
| SmoI | CTYRAG | 1 cut(s) | 455 |
| SstI | GAGCTC | 1 cut(s) | 518 |
| StyD4I | CCNGG | 1 cut(s) | 153 |
| StyI | CCWWGG | 1 cut(s) | 58 |
| TaiI | ACGT | 2 cut(s) | 108, 252 |
| TaqI | TCGA | 2 cut(s) | 150, 456 |
| TaqII | GACCGA | 1 cut(s) | 440 |
| TatI | WGTACW | 1 cut(s) | 160 |
| TauI | GCSGC | 6 cut(s) | 117, 145, 230, 240, 321, 344 |
| TseFI | GTSAC | 1 cut(s) | 208 |
| Tsp45I | GTSAC | 1 cut(s) | 208 |
| TspDTI | ATGAA | 2 cut(s) | 383, 491 |
| VpaK11BI | GGWCC | 1 cut(s) | 48 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 25 |
| XceI | RCATGY | 2 cut(s) | 186, 412 |
| XhoI | CTCGAG | 1 cut(s) | 455 |
| ZraI | GACGTC | 1 cut(s) | 250 |
| Zsp2I | ATGCAT | 1 cut(s) | 414 |