ankyrin repeat
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G07840 AT5G61230 |
| fragaria_vesca | FvH4_5g24200 FvH4_6g43270 |
| malus_domestica | MD00G1078600.v1.1 MD06G1017600.v1.1 |
| prunus_persica | Prupe.5G018400_v2.0.a1 |
| pyrus_communis | pycom06g01430 pycom16g25570 |
| rosa_chinensis | RchiOBHm_Chr2g0159541 RchiOBHm_Chr7g0214011 |
| rosa_laevigata | RLG00000002764 RLG00000021164 |
| rosa_multiflora | Rmu_sc0004260.1_g000002 Rmu_sc0009579.1_g000008 Rmu_sc0012414.1_g000012 |
| rosa_roxburghii | Rroxscaffold_3G00245590 |
| rosa_rugosa | Rorug02G0476700 Rorug07G0145200 |
| rosa_samantha | Rh2AG543600 Rh2AG544000 Rh2BG556700 Rh2CG526900 Rh2DG565700 Rh7AG278700 Rh7BG272100 Rh7CG297600 Rh7DG284300 |
| rosa_wichuraiana | Rw2G044960 Rw7G023970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 16, 106, 278 |
| AcsI | RAATTY | 1 cut(s) | 320 |
| AcuI | CTGAAG | 1 cut(s) | 419 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 97, 300 |
| AflIII | ACRYGT | 1 cut(s) | 357 |
| AgsI | TTSAA | 1 cut(s) | 160 |
| AjnI | CCWGG | 1 cut(s) | 397 |
| AluBI | AGCT | 6 cut(s) | 185, 236, 439, 465, 474, 483 |
| AluI | AGCT | 6 cut(s) | 185, 236, 439, 465, 474, 483 |
| Alw21I | GWGCWC | 1 cut(s) | 467 |
| ApeKI | GCWGC | 5 cut(s) | 137, 140, 185, 290, 471 |
| ApoI | RAATTY | 1 cut(s) | 320 |
| AspS9I | GGNCC | 1 cut(s) | 27 |
| AsuHPI | GGTGA | 1 cut(s) | 112 |
| AvaII | GGWCC | 1 cut(s) | 27 |
| BaeGI | GKGCMC | 1 cut(s) | 8 |
| BanII | GRGCYC | 1 cut(s) | 467 |
| BbsI | GAAGAC | 1 cut(s) | 425 |
| Bbv12I | GWGCWC | 1 cut(s) | 467 |
| BbvCI | CCTCAGC | 1 cut(s) | 189 |
| BbvI | GCAGC | 4 cut(s) | 124, 127, 172, 302 |
| BccI | CCATC | 1 cut(s) | 48 |
| BciT130I | CCWGG | 1 cut(s) | 399 |
| BfaI | CTAG | 2 cut(s) | 182, 440 |
| BisI | GCNGC | 6 cut(s) | 107, 138, 141, 186, 291, 472 |
| BlsI | GCNGC | 6 cut(s) | 108, 139, 142, 187, 292, 473 |
| Bme1390I | CCNGG | 1 cut(s) | 399 |
| Bme18I | GGWCC | 1 cut(s) | 27 |
| BmgT120I | GGNCC | 1 cut(s) | 27 |
| BmrFI | CCNGG | 1 cut(s) | 399 |
| BmsI | GCATC | 2 cut(s) | 235, 458 |
| BpiI | GAAGAC | 1 cut(s) | 425 |
| Bpu10I | CCTNAGC | 2 cut(s) | 11, 189 |
| BpuEI | CTTGAG | 2 cut(s) | 245, 425 |
| BsaJI | CCNNGG | 2 cut(s) | 397, 398 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 97, 300 |
| Bse1I | ACTGG | 1 cut(s) | 30 |
| BseBI | CCWGG | 1 cut(s) | 399 |
| BseDI | CCNNGG | 2 cut(s) | 397, 398 |
| BseGI | GGATG | 4 cut(s) | 49, 59, 133, 220 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 97, 300 |
| BseMII | CTCAG | 2 cut(s) | 25, 180 |
| BseNI | ACTGG | 1 cut(s) | 30 |
| BseRI | GAGGAG | 3 cut(s) | 316, 319, 434 |
| BseSI | GKGCMC | 1 cut(s) | 8 |
| BseXI | GCAGC | 4 cut(s) | 124, 127, 172, 302 |
| BsgI | GTGCAG | 1 cut(s) | 309 |
| Bsh1285I | CGRYCG | 1 cut(s) | 20 |
| BsiEI | CGRYCG | 1 cut(s) | 20 |
| BsiHKAI | GWGCWC | 1 cut(s) | 467 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 97, 300 |
| BsmI | GAATGC | 1 cut(s) | 139 |
| Bsp1286I | GDGCHC | 2 cut(s) | 8, 467 |
| BspACI | CCGC | 3 cut(s) | 16, 106, 278 |
| BspCNI | CTCAG | 2 cut(s) | 24, 181 |
| BsrI | ACTGG | 1 cut(s) | 30 |
| BssECI | CCNNGG | 2 cut(s) | 397, 398 |
| Bst2UI | CCWGG | 1 cut(s) | 399 |
| Bst4CI | ACNGT | 1 cut(s) | 287 |
| BstC8I | GCNNGC | 1 cut(s) | 8 |
| BstDEI | CTNAG | 3 cut(s) | 11, 189, 255 |
| BstEII | GGTNACC | 1 cut(s) | 166 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 95 |
| BstF5I | GGATG | 4 cut(s) | 49, 59, 133, 220 |
| BstMCI | CGRYCG | 1 cut(s) | 20 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 436, 471, 480 |
| BstNI | CCWGG | 1 cut(s) | 399 |
| BstNSI | RCATGY | 1 cut(s) | 361 |
| BstPI | GGTNACC | 1 cut(s) | 166 |
| BstSCI | CCNGG | 1 cut(s) | 397 |
| BstSLI | GKGCMC | 1 cut(s) | 8 |
| BstV1I | GCAGC | 4 cut(s) | 124, 127, 172, 302 |
| BstV2I | GAAGAC | 1 cut(s) | 425 |
| BtsCI | GGATG | 4 cut(s) | 49, 59, 133, 220 |
| BtsI | GCAGTG | 1 cut(s) | 321 |
| BtsIMutI | CAGTG | 3 cut(s) | 37, 292, 321 |
| Cac8I | GCNNGC | 1 cut(s) | 8 |
| Cfr13I | GGNCC | 1 cut(s) | 27 |
| CseI | GACGC | 1 cut(s) | 419 |
| CviAII | CATG | 2 cut(s) | 40, 358 |
| DdeI | CTNAG | 3 cut(s) | 11, 189, 255 |
| Ecl136II | GAGCTC | 1 cut(s) | 465 |
| Eco24I | GRGCYC | 1 cut(s) | 467 |
| Eco47I | GGWCC | 1 cut(s) | 27 |
| Eco53kI | GAGCTC | 1 cut(s) | 465 |
| Eco57I | CTGAAG | 1 cut(s) | 419 |
| Eco91I | GGTNACC | 1 cut(s) | 166 |
| EcoICRI | GAGCTC | 1 cut(s) | 465 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 95 |
| EcoO65I | GGTNACC | 1 cut(s) | 166 |
| EcoRII | CCWGG | 1 cut(s) | 397 |
| EcoT38I | GRGCYC | 1 cut(s) | 467 |
| FaeI | CATG | 2 cut(s) | 43, 361 |
| FaiI | YATR | 5 cut(s) | 41, 69, 212, 359, 363 |
| FatI | CATG | 2 cut(s) | 39, 357 |
| Fnu4HI | GCNGC | 6 cut(s) | 107, 138, 141, 186, 291, 472 |
| FokI | GGATG | 4 cut(s) | 56, 66, 140, 227 |
| FriOI | GRGCYC | 1 cut(s) | 467 |
| Fsp4HI | GCNGC | 6 cut(s) | 107, 138, 141, 186, 291, 472 |
| FspBI | CTAG | 2 cut(s) | 182, 440 |
| GluI | GCNGC | 6 cut(s) | 107, 138, 141, 186, 291, 472 |
| HgaI | GACGC | 1 cut(s) | 419 |
| Hin1II | CATG | 2 cut(s) | 43, 361 |
| HinfI | GANTC | 2 cut(s) | 58, 274 |
| HphI | GGTGA | 1 cut(s) | 112 |
| Hpy166II | GTNNAC | 1 cut(s) | 37 |
| Hpy188I | TCNGA | 1 cut(s) | 478 |
| Hpy188III | TCNNGA | 1 cut(s) | 113 |
| Hpy8I | GTNNAC | 1 cut(s) | 37 |
| HpyAV | CCTTC | 1 cut(s) | 154 |
| HpyCH4III | ACNGT | 1 cut(s) | 287 |
| HpyCH4V | TGCA | 3 cut(s) | 290, 449, 471 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 436, 471, 480 |
| HpyF3I | CTNAG | 3 cut(s) | 11, 189, 255 |
| Hsp92II | CATG | 2 cut(s) | 43, 361 |
| LmnI | GCTCC | 2 cut(s) | 233, 338 |
| Lsp1109I | GCAGC | 4 cut(s) | 124, 127, 172, 302 |
| LweI | GCATC | 2 cut(s) | 235, 458 |
| MaeI | CTAG | 2 cut(s) | 182, 440 |
| MaeIII | GTNAC | 1 cut(s) | 166 |
| MboII | GAAGA | 1 cut(s) | 425 |
| MhlI | GDGCHC | 2 cut(s) | 8, 467 |
| MluCI | AATT | 3 cut(s) | 155, 218, 320 |
| MlyI | GAGTC | 2 cut(s) | 52, 268 |
| MseI | TTAA | 1 cut(s) | 375 |
| MslI | CAYNNNNRTG | 1 cut(s) | 204 |
| MspR9I | CCNGG | 1 cut(s) | 399 |
| Mva1269I | GAATGC | 1 cut(s) | 139 |
| MvaI | CCWGG | 1 cut(s) | 399 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 436, 471, 480 |
| NlaIII | CATG | 2 cut(s) | 43, 361 |
| NspI | RCATGY | 1 cut(s) | 361 |
| PasI | CCCWGGG | 1 cut(s) | 398 |
| PciI | ACATGT | 1 cut(s) | 357 |
| PctI | GAATGC | 1 cut(s) | 139 |
| PkrI | GCNGC | 6 cut(s) | 108, 139, 142, 187, 292, 473 |
| PleI | GAGTC | 2 cut(s) | 52, 268 |
| PpsI | GAGTC | 2 cut(s) | 52, 268 |
| PscI | ACATGT | 1 cut(s) | 357 |
| Psp124BI | GAGCTC | 1 cut(s) | 467 |
| Psp6I | CCWGG | 1 cut(s) | 397 |
| PspEI | GGTNACC | 1 cut(s) | 166 |
| PspGI | CCWGG | 1 cut(s) | 397 |
| PspPI | GGNCC | 1 cut(s) | 27 |
| RseI | CAYNNNNRTG | 1 cut(s) | 204 |
| SacI | GAGCTC | 1 cut(s) | 467 |
| SaqAI | TTAA | 1 cut(s) | 375 |
| SatI | GCNGC | 6 cut(s) | 107, 138, 141, 186, 291, 472 |
| Sau96I | GGNCC | 1 cut(s) | 27 |
| SchI | GAGTC | 2 cut(s) | 52, 268 |
| ScrFI | CCNGG | 1 cut(s) | 399 |
| SduI | GDGCHC | 2 cut(s) | 8, 467 |
| SfaNI | GCATC | 2 cut(s) | 235, 458 |
| SinI | GGWCC | 1 cut(s) | 27 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 204 |
| SmlI | CTYRAG | 2 cut(s) | 224, 404 |
| SmoI | CTYRAG | 2 cut(s) | 224, 404 |
| Sse9I | AATT | 3 cut(s) | 155, 218, 320 |
| SsiI | CCGC | 3 cut(s) | 16, 106, 278 |
| SspMI | CTAG | 2 cut(s) | 182, 440 |
| SstI | GAGCTC | 1 cut(s) | 467 |
| StyD4I | CCNGG | 1 cut(s) | 397 |
| TaaI | ACNGT | 1 cut(s) | 287 |
| TaqI | TCGA | 1 cut(s) | 79 |
| TasI | AATT | 3 cut(s) | 155, 218, 320 |
| TauI | GCSGC | 1 cut(s) | 109 |
| Tru1I | TTAA | 1 cut(s) | 375 |
| Tru9I | TTAA | 1 cut(s) | 375 |
| TscAI | CASTG | 3 cut(s) | 37, 292, 321 |
| TseI | GCWGC | 5 cut(s) | 137, 140, 185, 290, 471 |
| TspDTI | ATGAA | 3 cut(s) | 56, 231, 440 |
| TspRI | CASTG | 3 cut(s) | 37, 292, 321 |
| VpaK11BI | GGWCC | 1 cut(s) | 27 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 95 |
| XapI | RAATTY | 1 cut(s) | 320 |
| XceI | RCATGY | 1 cut(s) | 361 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 37, 395 |
| XspI | CTAG | 2 cut(s) | 182, 440 |