Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0004546

Physical Location & Seq

Genomic Coordinates Forward (+)

35554517 .. 35561905

Gene Structure 7389 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g46710.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3147 bp

ATGTCTGCAAAGGTGTTTCATTCATTTAGAGACGAGAATCGTGATCTCCATAAGCAAATTGGGTGCATGAGTGGGATTTTTCAGCTGTTTGATCGCCGGCATTTCCTCTCCGGCCGGAGCCTTAACAGCCACAAGAGACTTCCTCCAGGTGAGAATGGCAACCAAGAAATGGATCCCAAAAGCAGAGCACAACACAAAGCTACAGATAAAAATCGGAAAAAGGTTGTCAAAGAGAGATGGTTCTCCACAGAATCATCCACAACCACTGTTTCATCATCTTCTTGTTCATCTAGCTTCTCATCATCTCTTGAATACAACAAAGCAGCTCAGCAAGAGCAATCCTCATCCGGCCAAACGATTTACAATGACAGACACACTCAGGACCTGTCTATGAACAAACTGAATGTTTCAAAGCCCTTAAGCCAGCAATCCTTTGACTCGACCTACAGAGAAGCCCGTGGCATTTCAATCAGACCTGGAGGAAAAGATGGAGTAGGTCATATATTGAAATACATCGACTCCCCGAGGCCTTCACAACCACTAAAACCCGTCAAGCCAAGGGTTTCTGGTGCTGGTGAGTCGTTTCAAGTTCATGCCAAGCTTCGGGAAGCACATCGAAAGTCCAACGAGGAGAAGGATGGTTGCAAGCGGTTTGTGCCGAAAGAAGCGAGAAGGCTGTCTTATGATGAAAGGGCATCACGAGATGCACTGAAATCCACAACAAAACTCAAAGAGCTCCCAAGGCTTTCTTTGGACAGCAAAGAACGTTCCATAAGGAGGGCCTGCAGCCCCGAAACAAGATCAAATCATTTCTTCAAGGATCTGCAGAGGGAGAATGGGCACTGCGACAAAATGCTTGACCTGCAGCCAGAACCAGGAAGTTATAAAAGACCATCGAATGTTGTTGCGAAGTTGATGGGATTGGATCTCTCAGAGTCAGAGTCAACCAATGTTACTCCATTGAGGCTGATTGATACCTGTCCATATGACAGATTTGATCCCTTGTCCAGATCATCAAGAACAACAGATGAATTCAAGCAAGAGGTTTTGTCTGGGTTCCCAAGTAATGCGCAGAAGGGGTTCAGCTCACCCCAGAGGATAAGTGCCAATTCAGTCATGAAGCGCACCGCAAATTCCAAGTTTCCAATAGAAACAGCTCCTTGGAGGCAGCCACATGGAAGCAAAGGTTCTCCTCAATCAACTTTCAACTGTCAAGAAGAACCTACAAAAGCACCAAAGTCATCACCTACAGTTTATGGTGAAATGGAGAAGAGACTAGCAGAACTTGAGTTCAAGAAATCAGGAACGGACCTCCGAGCTCTTAAACAGATACTTGAAGCAATGCAGAAGACCAAGGAAAACTCGGAGAGCAAAAAAGGAGCCTCAAATTATCCCTCTCAAGTAAGCAACAAAAGTGTATTGTCTGAGAGCACAATATCAGCAAGCAAGAGAAATATAAAAAGTGGCCCATCACTTCCTGCCACAGCCATGGGTTCCAAATCCCCAAAGAGTTACAAATCACCGATCATCATCATGAAACCAGGTAAACTCATGGAGAAAACCCACAACTCTGCTTCCACTGCGATCTCCATGGACAACACATCATGTCTGCGGAAGCTTCGGACTAGCAACCCTGGTGACAACAGAAAGGAATTGCTTGAGAGGAAAGCCAAAGATTTGACTCCAAGAAACATTCATACCAGTGATTCTTTCAATGGACGCCTTCACTCCATTGACAAGAAATCTGATGTAAGAACTTCTAGAGCTGCACAAAAACCAAAGATGCCCCAGGGTGAAGAAAATTCCCCGGTTCCAAGTAGAAGCATCACAAGCCCAAGACTGCAAAACAGAAGACTTGGATTGGAAAAGCAATCTCCTACCGCCACTCTATCATCAGATTCAAGCATGACCAGACAGCAACGCAGTAGGCAATCATCACAAGCAAGCACCCCAGGTAGAAAACTTGGGTCAAAATCTGCCAGTTTGCACCAATTCAATTGCCAACTGAGTGAAACTAGCACCAGTACAAGAGCTGTGAGTCACCAAGATGATACCACTTCTCAGCATTCTGAGAGCAACAGCAGCTTGGTCTCGCATGCAGATACAGAAGCCACAAGCAGTCATCAGTCAGACACAATGAAAGCTATGTACTTGAAGCGGCACAGCCAAAAACAAAACAGCCCAGAAGTAGTGCTAAGTGATGATAGGTTAAAAGCAGAACCTGGGAAAGCTTCGTTAGAACAACCAAGTCCTATCTCCGTTCTTGATTCTACATTCTATAGGGACGACTCACCTTCTCCTGTGAAGAAGATATCAAATGCCTTTAAAGATGATGACGGGCAAAATCTGGATGAAGCAGAGTATGGACCAATGGACGGTCTGCTATTCAGAACTGGTCTTGGTGCGGAGATTGACCATAATAGGCTAGAGAACCTGAAGCACCTAATTCAGAACCATGCACGTATGAGAAGCACACATGAAGAACCCATCCTCGACCACATTACTCTCCTCTGTGACCGCTCAAATCCAGACCACAAGTACATTTCAGATATATTGCTAGCATCAGGAATTCTTACGTATCTCGAATCAGCTTGGACGACCATTGAGCTCCACACATTAGACCACCTGATCAACTCTAATTTGTTCCTTGCACTGGAAGAAATCAGGGCAGATATAGAGCATCATGGTGATGATGAAAAGAGATGCGAAAAGAATCTCCAATCCCAATCGGACGAAACAAATCAAAGAAAGCTAGTGTTCGATGTTGTCAATGAATTCCTAGTTCAAAAATTAGTTGTGGAGAACAAGCCATGGTTCTCACAAAACAAGCTGGCAGAAGGGAAACCAAGAGGGCAGCGGCTTTTGACAGAATTATGTTCCCAGGTTGATCAGCTACAAAGATGTAACTTGAATGGCAACATAGATGATGAAGATGAAAGTTTGACAAGCATCTTGTTGGAAAATTTCATGGATCAATCACAGAATTGGACAGAGTGTGATGGTGAAATTCCAAGCATAGTGTTGAATGTTGAGCGATTGATCTTTAAAGACTTGATAACTGAAATTGTGAATGGAGAAGCAGTTCAACATGCGGGTTGGTCCGGTGGGCATTGCAGGCAACTGTTTTCCAAGAAGGGGCTCTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0008017 GO:0008092 GO:0008150 GO:0015631 GO:0022603 GO:0022604 GO:0040008 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051510 GO:0051513 GO:0065007

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

1049

Amino Acids

117.62

Weight (kDa)

9.15

Isoelectric Point (pI)

59.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4378	PF14309	844 - 1021	8.6e-26	Domain of unknown function (DUF4378)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Orthologous Genes (Group: OG0004546)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46710 FvH4_6g46710 FvH4_6g46710 FvH4_6g46710
malus_domestica	MD09G1068400.v1.1 MD17G1061300.v1.1
prunus_persica	Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1
pyrus_communis	pycom12433g00110 pycom12433g00120 pycom17g06120
rosa_chinensis	RchiOBHm_Chr2g0165601
rosa_laevigata	RLG00000021542
rosa_multiflora	Rmu_co8268985.1_g000001 Rmu_co8395029.1_g000001 Rmu_sc0005425.1_g000021 Rmu_sc0035818.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085700
rosa_rugosa	Rorug02G0516300 Rorug02G0516400 Rorug02G0516400 Rorug02G0516400
rosa_samantha	Rh2AG582500 Rh2BG594600 Rh2CG564500 Rh2DG604500
rosa_wichuraiana	Rw0G016060 Rw2G048590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	885
Acc16I	TGCGCA	1 cut(s)	1071
Acc36I	ACCTGC	1 cut(s)	870
AccB7I	CCANNNNNTGG	1 cut(s)	169
AccBSI	CCGCTC	1 cut(s)	2520
AciI	CCGC	9 cut(s)	649, 1128, 1612, 1881, 2158, 2405, 2518, 2857, 3092
AclI	AACGTT	1 cut(s)	766
AclWI	GGATC	6 cut(s)	167, 180, 828, 933, 992, 2979
AcoI	YGGCCR	2 cut(s)	112, 349
AcsI	RAATTY	7 cut(s)	1031, 1132, 1801, 2568, 2774, 2962, 3006
AcuI	CTGAAG	1 cut(s)	2456
AcyI	GRCGYC	1 cut(s)	1720
AfaI	GTAC	3 cut(s)	2026, 2150, 2540
AfiI	CCNNNNNNNGG	7 cut(s)	169, 603, 777, 875, 2375, 2653, 3135
AflII	CTTAAG	1 cut(s)	418
AjnI	CCWGG	9 cut(s)	145, 475, 874, 1540, 1633, 1788, 1951, 2221, 2880
AloI	GAACNNNNNNTCC	2 cut(s)	3066, 3098
Alw21I	GWGCWC	5 cut(s)	190, 738, 1321, 1433, 2610
Alw26I	GTCTC	4 cut(s)	24, 130, 1267, 2095
AlwI	GGATC	6 cut(s)	167, 180, 828, 933, 992, 2979
AlwNI	CAGNNNCTG	2 cut(s)	385, 2222
Ama87I	CYCGRG	1 cut(s)	523
AoxI	GGCC	5 cut(s)	112, 349, 527, 780, 1465
ApeKI	GCWGC	7 cut(s)	323, 786, 865, 1168, 1766, 2082, 2854
ApoI	RAATTY	7 cut(s)	1031, 1132, 1801, 2568, 2774, 2962, 3006
Asp700I	GAANNNNTTC	2 cut(s)	1079, 3081
AspLEI	GCGC	2 cut(s)	1072, 1125
AspS9I	GGNCC	6 cut(s)	382, 780, 1309, 1466, 2366, 3099
AsuC2I	CCSGG	1 cut(s)	1808
AsuNHI	GCTAGC	1 cut(s)	2557
AvaI	CYCGRG	1 cut(s)	523
AvaII	GGWCC	4 cut(s)	382, 1309, 2366, 3099
BaeGI	GKGCMC	1 cut(s)	843
BamHI	GGATCC	1 cut(s)	172
BanII	GRGCYC	4 cut(s)	738, 1321, 2610, 3141
BauI	CACGAG	1 cut(s)	699
BbsI	GAAGAC	2 cut(s)	1355, 1858
Bbv12I	GWGCWC	5 cut(s)	190, 738, 1321, 1433, 2610
BbvI	GCAGC	7 cut(s)	335, 798, 877, 1180, 1753, 2094, 2866
BccI	CCATC	8 cut(s)	231, 482, 632, 901, 910, 1477, 2495, 2993
BciT130I	CCWGG	9 cut(s)	147, 477, 876, 1542, 1635, 1790, 1953, 2223, 2882
BclI	TGATCA	2 cut(s)	2628, 2887
BcnI	CCSGG	1 cut(s)	1808
BcoDI	GTCTC	4 cut(s)	24, 130, 1267, 2095
BfaI	CTAG	9 cut(s)	291, 1277, 1626, 1761, 2016, 2426, 2558, 2753, 2780
BfmI	CTRYAG	7 cut(s)	201, 445, 784, 824, 863, 1248, 2278
BfrI	CTTAAG	1 cut(s)	418
BfuAI	ACCTGC	1 cut(s)	870
BisI	GCNGC	9 cut(s)	324, 787, 866, 1169, 1767, 2083, 2159, 2855, 2858
BlpI	GCTNAGC	1 cut(s)	327
BlsI	GCNGC	9 cut(s)	325, 788, 867, 1170, 1768, 2084, 2160, 2856, 2859
Bme18I	GGWCC	4 cut(s)	382, 1309, 2366, 3099
BmeT110I	CYCGRG	1 cut(s)	523
BmgT120I	GGNCC	6 cut(s)	382, 780, 1309, 1466, 2366, 3099
BmiI	GGNNCC	6 cut(s)	119, 174, 1058, 1381, 1495, 1812
BmsI	GCATC	8 cut(s)	694, 704, 1773, 1833, 2570, 2689, 2693, 2958
BmtI	GCTAGC	1 cut(s)	2561
BpiI	GAAGAC	2 cut(s)	1355, 1858
BplI	GAGNNNNNCTC	4 cut(s)	127, 159, 326, 358
BpmI	CTGGAG	2 cut(s)	129, 498
Bpu1102I	GCTNAGC	1 cut(s)	327
BpuEI	CTTGAG	3 cut(s)	1307, 1383, 1679
BpuMI	CCSGG	1 cut(s)	1808
BsaAI	YACGTR	2 cut(s)	2462, 2577
BsaBI	GATNNNNATC	2 cut(s)	210, 1529
BsaHI	GRCGYC	1 cut(s)	1720
BsaI	GGTCTC	1 cut(s)	2095
BsaWI	WCCGGW	1 cut(s)	3101
BsaXI	ACNNNNNCTCC	4 cut(s)	503, 533, 3066, 3096
Bsc4I	CCNNNNNNNGG	7 cut(s)	169, 603, 777, 875, 2375, 2653, 3135
Bse118I	RCCGGY	1 cut(s)	96
Bse1I	ACTGG	5 cut(s)	1701, 1980, 2022, 2398, 2658
Bse3DI	GCAATG	2 cut(s)	1347, 3109
Bse8I	GATNNNNATC	2 cut(s)	210, 1529
BseBI	CCWGG	9 cut(s)	147, 477, 876, 1542, 1635, 1790, 1953, 2223, 2882
BseGI	GGATG	5 cut(s)	254, 344, 643, 2356, 2487
BseJI	GATNNNNATC	2 cut(s)	210, 1529
BseLI	CCNNNNNNNGG	7 cut(s)	169, 603, 777, 875, 2375, 2653, 3135
BseMI	GCAATG	2 cut(s)	1347, 3109
BseMII	CTCAG	7 cut(s)	341, 392, 945, 1416, 1997, 2061, 2075
BseNI	ACTGG	5 cut(s)	1701, 1980, 2022, 2398, 2658
BseRI	GAGGAG	3 cut(s)	644, 1182, 2498
BseSI	GKGCMC	1 cut(s)	843
BseX3I	CGGCCG	1 cut(s)	112
BseXI	GCAGC	7 cut(s)	335, 798, 877, 1180, 1753, 2094, 2866
BsgI	GTGCAG	1 cut(s)	1752
Bsh1285I	CGRYCG	1 cut(s)	115
BshFI	GGCC	5 cut(s)	114, 351, 529, 782, 1467
BsiEI	CGRYCG	1 cut(s)	115
BsiHKAI	GWGCWC	5 cut(s)	190, 738, 1321, 1433, 2610
BsiHKCI	CYCGRG	1 cut(s)	523
BsiSI	CCGG	6 cut(s)	97, 111, 115, 348, 1808, 3102
BslFI	GGGAC	1 cut(s)	2297
BslI	CCNNNNNNNGG	7 cut(s)	169, 603, 777, 875, 2375, 2653, 3135
BsmAI	GTCTC	4 cut(s)	24, 130, 1267, 2095
BsmBI	CGTCTC	1 cut(s)	24
BsmFI	GGGAC	1 cut(s)	2297
BsmI	GAATGC	1 cut(s)	2065
BsnI	GGCC	5 cut(s)	114, 351, 529, 782, 1467
Bso31I	GGTCTC	1 cut(s)	2095
BsoBI	CYCGRG	1 cut(s)	523
Bsp1286I	GDGCHC	7 cut(s)	190, 738, 843, 1321, 1433, 2610, 3141
Bsp1720I	GCTNAGC	1 cut(s)	327
Bsp19I	CCATGG	3 cut(s)	1488, 1590, 2810
BspACI	CCGC	9 cut(s)	649, 1128, 1612, 1881, 2158, 2405, 2518, 2857, 3092
BspANI	GGCC	5 cut(s)	114, 351, 529, 782, 1467
BspCNI	CTCAG	7 cut(s)	340, 391, 944, 1417, 1998, 2062, 2074
BspHI	TCATGA	2 cut(s)	1116, 1533
BspLI	GGNNCC	6 cut(s)	119, 174, 1058, 1381, 1495, 1812
BspMAI	CTGCAG	3 cut(s)	788, 828, 867
BspMI	ACCTGC	1 cut(s)	870
BspOI	GCTAGC	1 cut(s)	2561
BspPI	GGATC	6 cut(s)	167, 180, 828, 933, 992, 2979
BspTI	CTTAAG	1 cut(s)	418
BspTNI	GGTCTC	1 cut(s)	2095
BsrBI	CCGCTC	1 cut(s)	2520
BsrDI	GCAATG	2 cut(s)	1347, 3109
BsrFI	RCCGGY	1 cut(s)	96
BsrI	ACTGG	5 cut(s)	1701, 1980, 2022, 2398, 2658
BssAI	RCCGGY	1 cut(s)	96
BssNI	GRCGYC	1 cut(s)	1720
BssSI	CACGAG	1 cut(s)	699
BssT1I	CCWWGG	7 cut(s)	557, 740, 1160, 1353, 1488, 1590, 2810
Bst2BI	CACGAG	1 cut(s)	699
Bst2UI	CCWGG	9 cut(s)	147, 477, 876, 1542, 1635, 1790, 1953, 2223, 2882
Bst4CI	ACNGT	5 cut(s)	268, 1211, 1252, 2378, 3123
Bst6I	CTCTTC	1 cut(s)	1265
BstACI	GRCGYC	1 cut(s)	1720
BstAFI	CTTAAG	1 cut(s)	418
BstBAI	YACGTR	2 cut(s)	2462, 2577
BstDEI	CTNAG	8 cut(s)	327, 378, 931, 1425, 2006, 2061, 2070, 2195
BstDSI	CCRYGG	4 cut(s)	457, 1488, 1590, 2810
BstF5I	GGATG	5 cut(s)	254, 344, 643, 2356, 2487
BstHHI	GCGC	2 cut(s)	1072, 1125
BstMAI	GTCTC	4 cut(s)	24, 130, 1267, 2095
BstMCI	CGRYCG	1 cut(s)	115
BstMWI	GCNNNNNNNGC	8 cut(s)	126, 655, 742, 862, 1580, 1830, 2082, 3115
BstNI	CCWGG	9 cut(s)	147, 477, 876, 1542, 1635, 1790, 1953, 2223, 2882
BstNSI	RCATGY	2 cut(s)	2099, 3092
BstSFI	CTRYAG	7 cut(s)	201, 445, 784, 824, 863, 1248, 2278
BstSLI	GKGCMC	1 cut(s)	843
BstSNI	TACGTA	1 cut(s)	2577
BstV1I	GCAGC	7 cut(s)	335, 798, 877, 1180, 1753, 2094, 2866
BstV2I	GAAGAC	2 cut(s)	1355, 1858
BstX2I	RGATCY	3 cut(s)	172, 820, 925
BstXI	CCANNNNNNTGG	1 cut(s)	1489
BstYI	RGATCY	3 cut(s)	172, 820, 925
BstZI	CGGCCG	1 cut(s)	112
BsuRI	GGCC	5 cut(s)	114, 351, 529, 782, 1467
BtgI	CCRYGG	4 cut(s)	457, 1488, 1590, 2810
BtsCI	GGATG	5 cut(s)	254, 344, 643, 2356, 2487
BtsI	GCAGTG	2 cut(s)	841, 1578
BtsIMutI	CAGTG	6 cut(s)	264, 707, 841, 1578, 1708, 2651
BveI	ACCTGC	1 cut(s)	870
CaiI	CAGNNNCTG	2 cut(s)	385, 2222
CciI	TCATGA	2 cut(s)	1116, 1533
CfoI	GCGC	2 cut(s)	1072, 1125
Cfr10I	RCCGGY	1 cut(s)	96
Cfr13I	GGNCC	6 cut(s)	382, 780, 1309, 1466, 2366, 3099
CseI	GACGC	1 cut(s)	1728
CsiI	ACCWGGT	1 cut(s)	1540
Csp6I	GTAC	3 cut(s)	2025, 2149, 2539
CviQI	GTAC	3 cut(s)	2025, 2149, 2539
DdeI	CTNAG	8 cut(s)	327, 378, 931, 1425, 2006, 2061, 2070, 2195
DraI	TTTAAA	2 cut(s)	2326, 3046
EaeI	YGGCCR	2 cut(s)	112, 349
EagI	CGGCCG	1 cut(s)	112
Eam1104I	CTCTTC	1 cut(s)	1265
EarI	CTCTTC	1 cut(s)	1265
Ecl136II	GAGCTC	3 cut(s)	736, 1319, 2608
EclXI	CGGCCG	1 cut(s)	112
Eco105I	TACGTA	1 cut(s)	2577
Eco130I	CCWWGG	7 cut(s)	557, 740, 1160, 1353, 1488, 1590, 2810
Eco147I	AGGCCT	1 cut(s)	529
Eco24I	GRGCYC	4 cut(s)	738, 1321, 2610, 3141
Eco31I	GGTCTC	1 cut(s)	2095
Eco32I	GATATC	1 cut(s)	2313
Eco47I	GGWCC	4 cut(s)	382, 1309, 2366, 3099
Eco52I	CGGCCG	1 cut(s)	112
Eco53kI	GAGCTC	3 cut(s)	736, 1319, 2608
Eco57I	CTGAAG	1 cut(s)	2456
Eco88I	CYCGRG	1 cut(s)	523
EcoICRI	GAGCTC	3 cut(s)	736, 1319, 2608
EcoO109I	RGGNCCY	2 cut(s)	382, 780
EcoRI	GAATTC	3 cut(s)	1031, 2568, 2774
EcoRII	CCWGG	9 cut(s)	145, 475, 874, 1540, 1633, 1788, 1951, 2221, 2880
EcoRV	GATATC	1 cut(s)	2313
EcoT14I	CCWWGG	7 cut(s)	557, 740, 1160, 1353, 1488, 1590, 2810
EcoT38I	GRGCYC	4 cut(s)	738, 1321, 2610, 3141
ErhI	CCWWGG	7 cut(s)	557, 740, 1160, 1353, 1488, 1590, 2810
Esp3I	CGTCTC	1 cut(s)	24
FalI	AAGNNNNNCTT	4 cut(s)	664, 696, 733, 765
FaqI	GGGAC	1 cut(s)	2297
FauI	CCCGC	1 cut(s)	3085
FauNDI	CATATG	1 cut(s)	985
FbaI	TGATCA	2 cut(s)	2628, 2887
Fnu4HI	GCNGC	9 cut(s)	324, 787, 866, 1169, 1767, 2083, 2159, 2855, 2858
FokI	GGATG	5 cut(s)	241, 331, 650, 2363, 2474
FriOI	GRGCYC	4 cut(s)	738, 1321, 2610, 3141
Fsp4HI	GCNGC	9 cut(s)	324, 787, 866, 1169, 1767, 2083, 2159, 2855, 2858
FspBI	CTAG	9 cut(s)	291, 1277, 1626, 1761, 2016, 2426, 2558, 2753, 2780
FspI	TGCGCA	1 cut(s)	1071
GlaI	GCGC	2 cut(s)	1071, 1124
GluI	GCNGC	9 cut(s)	324, 787, 866, 1169, 1767, 2083, 2159, 2855, 2858
GsuI	CTGGAG	2 cut(s)	129, 498
HaeIII	GGCC	5 cut(s)	114, 351, 529, 782, 1467
HapII	CCGG	6 cut(s)	97, 111, 115, 348, 1808, 3102
HgaI	GACGC	1 cut(s)	1728
HhaI	GCGC	2 cut(s)	1072, 1125
Hin1I	GRCGYC	1 cut(s)	1720
Hin6I	GCGC	2 cut(s)	1070, 1123
HinP1I	GCGC	2 cut(s)	1070, 1123
HincII	GTYRAC	1 cut(s)	945
HindII	GTYRAC	1 cut(s)	945
HindIII	AAGCTT	3 cut(s)	599, 1616, 2229
HpaII	CCGG	6 cut(s)	97, 111, 115, 348, 1808, 3102
Hpy166II	GTNNAC	2 cut(s)	945, 1547
Hpy8I	GTNNAC	2 cut(s)	945, 1547
HpyAV	CCTTC	8 cut(s)	540, 628, 666, 1069, 1733, 2304, 2831, 3127
HpyCH4III	ACNGT	5 cut(s)	268, 1211, 1252, 2378, 3123
HpyCH4IV	ACGT	3 cut(s)	766, 2461, 2576
HpyF10VI	GCNNNNNNNGC	8 cut(s)	126, 655, 742, 862, 1580, 1830, 2082, 3115
HpyF3I	CTNAG	8 cut(s)	327, 378, 931, 1425, 2006, 2061, 2070, 2195
HpySE526I	ACGT	3 cut(s)	766, 2461, 2576
Hsp92I	GRCGYC	1 cut(s)	1720
HspAI	GCGC	2 cut(s)	1070, 1123
KroI	GCCGGC	1 cut(s)	96
KroNI	GCCGGC	1 cut(s)	98
Ksp22I	TGATCA	2 cut(s)	2628, 2887
LmnI	GCTCC	5 cut(s)	117, 741, 1162, 1379, 2613
Lsp1109I	GCAGC	7 cut(s)	335, 798, 877, 1180, 1753, 2094, 2866
LweI	GCATC	8 cut(s)	694, 704, 1773, 1833, 2570, 2689, 2693, 2958
MabI	ACCWGGT	1 cut(s)	1540
MaeI	CTAG	9 cut(s)	291, 1277, 1626, 1761, 2016, 2426, 2558, 2753, 2780
MaeII	ACGT	3 cut(s)	766, 2461, 2576
MaeIII	GTNAC	6 cut(s)	952, 1511, 1637, 2039, 2513, 2903
MbiI	CCGCTC	1 cut(s)	2520
MfeI	CAATTG	1 cut(s)	1996
MflI	RGATCY	3 cut(s)	172, 820, 925
MhlI	GDGCHC	7 cut(s)	190, 738, 843, 1321, 1433, 2610, 3141
MlyI	GAGTC	8 cut(s)	431, 512, 587, 944, 950, 1675, 2047, 2282
MmeI	TCCRAC	2 cut(s)	648, 2937
MroNI	GCCGGC	1 cut(s)	96
MroXI	GAANNNNTTC	2 cut(s)	1079, 3081
MseI	TTAA	6 cut(s)	123, 419, 1323, 2210, 2325, 3045
MslI	CAYNNNNRTG	6 cut(s)	1487, 1532, 1701, 2046, 2685, 2688
MspA1I	CMGCKG	2 cut(s)	85, 2857
MspCI	CTTAAG	1 cut(s)	418
MspI	CCGG	6 cut(s)	97, 111, 115, 348, 1808, 3102
MunI	CAATTG	1 cut(s)	1996
Mva1269I	GAATGC	1 cut(s)	2065
MvaI	CCWGG	9 cut(s)	147, 477, 876, 1542, 1635, 1790, 1953, 2223, 2882
MwoI	GCNNNNNNNGC	8 cut(s)	126, 655, 742, 862, 1580, 1830, 2082, 3115
NaeI	GCCGGC	1 cut(s)	98
NciI	CCSGG	1 cut(s)	1808
NcoI	CCATGG	3 cut(s)	1488, 1590, 2810
NdeI	CATATG	1 cut(s)	985
NgoMIV	GCCGGC	1 cut(s)	96
NheI	GCTAGC	1 cut(s)	2557
NlaIV	GGNNCC	6 cut(s)	119, 174, 1058, 1381, 1495, 1812
NmuCI	GTSAC	3 cut(s)	1637, 2039, 2513
NsbI	TGCGCA	1 cut(s)	1071
NspI	RCATGY	2 cut(s)	2099, 3092
PaeI	GCATGC	1 cut(s)	2099
PagI	TCATGA	2 cut(s)	1116, 1533
PasI	CCCWGGG	1 cut(s)	1789
PceI	AGGCCT	1 cut(s)	529
PctI	GAATGC	1 cut(s)	2065
PdiI	GCCGGC	1 cut(s)	98
PdmI	GAANNNNTTC	2 cut(s)	1079, 3081
PfeI	GAWTC	7 cut(s)	37, 251, 1706, 1898, 2267, 2585, 2713
PflMI	CCANNNNNTGG	1 cut(s)	169
PkrI	GCNGC	9 cut(s)	325, 788, 867, 1170, 1768, 2084, 2160, 2856, 2859
PleI	GAGTC	8 cut(s)	431, 512, 586, 943, 949, 1675, 2046, 2282
PpsI	GAGTC	8 cut(s)	431, 512, 586, 943, 949, 1675, 2046, 2282
Ppu21I	YACGTR	2 cut(s)	2462, 2577
PpuMI	RGGWCCY	1 cut(s)	382
PsiI	TTATAA	1 cut(s)	885
Psp124BI	GAGCTC	3 cut(s)	738, 1321, 2610
Psp1406I	AACGTT	1 cut(s)	766
Psp5II	RGGWCCY	1 cut(s)	382
Psp6I	CCWGG	9 cut(s)	145, 475, 874, 1540, 1633, 1788, 1951, 2221, 2880
PspGI	CCWGG	9 cut(s)	145, 475, 874, 1540, 1633, 1788, 1951, 2221, 2880
PspN4I	GGNNCC	6 cut(s)	119, 174, 1058, 1381, 1495, 1812
PspPI	GGNCC	6 cut(s)	382, 780, 1309, 1466, 2366, 3099
PspPPI	RGGWCCY	1 cut(s)	382
PstI	CTGCAG	3 cut(s)	788, 828, 867
PstNI	CAGNNNCTG	2 cut(s)	385, 2222
PsuI	RGATCY	3 cut(s)	172, 820, 925
PvuII	CAGCTG	1 cut(s)	85
RsaI	GTAC	3 cut(s)	2026, 2150, 2540
RsaNI	GTAC	3 cut(s)	2025, 2149, 2539
RseI	CAYNNNNRTG	6 cut(s)	1487, 1532, 1701, 2046, 2685, 2688
SacI	GAGCTC	3 cut(s)	738, 1321, 2610
SaqAI	TTAA	6 cut(s)	123, 419, 1323, 2210, 2325, 3045
SatI	GCNGC	9 cut(s)	324, 787, 866, 1169, 1767, 2083, 2159, 2855, 2858
Sau96I	GGNCC	6 cut(s)	382, 780, 1309, 1466, 2366, 3099
SchI	GAGTC	8 cut(s)	431, 512, 587, 944, 950, 1675, 2047, 2282
SduI	GDGCHC	7 cut(s)	190, 738, 843, 1321, 1433, 2610, 3141
SexAI	ACCWGGT	1 cut(s)	1540
SfaNI	GCATC	8 cut(s)	694, 704, 1773, 1833, 2570, 2689, 2693, 2958
SfcI	CTRYAG	7 cut(s)	201, 445, 784, 824, 863, 1248, 2278
SinI	GGWCC	4 cut(s)	382, 1309, 2366, 3099
SmiMI	CAYNNNNRTG	6 cut(s)	1487, 1532, 1701, 2046, 2685, 2688
SmlI	CTYRAG	4 cut(s)	418, 1286, 1398, 1658
SmoI	CTYRAG	4 cut(s)	418, 1286, 1398, 1658
SnaBI	TACGTA	1 cut(s)	2577
SphI	GCATGC	1 cut(s)	2099
SseBI	AGGCCT	1 cut(s)	529
SsiI	CCGC	9 cut(s)	649, 1128, 1612, 1881, 2158, 2405, 2518, 2857, 3092
SspMI	CTAG	9 cut(s)	291, 1277, 1626, 1761, 2016, 2426, 2558, 2753, 2780
SstI	GAGCTC	3 cut(s)	738, 1321, 2610
StuI	AGGCCT	1 cut(s)	529
StyI	CCWWGG	7 cut(s)	557, 740, 1160, 1353, 1488, 1590, 2810
TaaI	ACNGT	5 cut(s)	268, 1211, 1252, 2378, 3123
TaiI	ACGT	3 cut(s)	769, 2464, 2579
TaqI	TCGA	7 cut(s)	440, 516, 616, 896, 2493, 2583, 2760
TatI	WGTACW	3 cut(s)	2024, 2148, 2538
TauI	GCSGC	2 cut(s)	2161, 2860
TfiI	GAWTC	7 cut(s)	37, 251, 1706, 1898, 2267, 2585, 2713
Tru1I	TTAA	6 cut(s)	123, 419, 1323, 2210, 2325, 3045
Tru9I	TTAA	6 cut(s)	123, 419, 1323, 2210, 2325, 3045
TscAI	CASTG	6 cut(s)	271, 714, 848, 1585, 1708, 2658
TseFI	GTSAC	3 cut(s)	1637, 2039, 2513
TseI	GCWGC	7 cut(s)	323, 786, 865, 1168, 1766, 2082, 2854
Tsp45I	GTSAC	3 cut(s)	1637, 2039, 2513
TspGWI	ACGGA	2 cut(s)	1322, 2248
TspRI	CASTG	6 cut(s)	271, 714, 848, 1585, 1708, 2658
Van91I	CCANNNNNTGG	1 cut(s)	169
Vha464I	CTTAAG	1 cut(s)	418
VpaK11BI	GGWCC	4 cut(s)	382, 1309, 2366, 3099
XapI	RAATTY	7 cut(s)	1031, 1132, 1801, 2568, 2774, 2962, 3006
XbaI	TCTAGA	1 cut(s)	1760
XceI	RCATGY	2 cut(s)	2099, 3092
XcmI	CCANNNNNNNNNTGG	1 cut(s)	56
XmnI	GAANNNNTTC	2 cut(s)	1079, 3081
XspI	CTAG	9 cut(s)	291, 1277, 1626, 1761, 2016, 2426, 2558, 2753, 2780

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.