Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0004546

Physical Location & Seq

Genomic Coordinates Forward (+)

74566148 .. 74571928

Gene Structure 5781 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG564500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2277 bp

ATGTCTGCAAAGGTGTTTCATTCATTCAGAGATGAGAATCGTGATCTCCAAAAGCAACTTGGGTGCATGAGCGGGATTTTTCAGCTGTTTGATCGCCGGCATTTCCTCTCCGGCCGGAGCATCAATGGCCACAGTCACAAGAGACTTCCTCCAGGTGAGAATGGCAAACAAGAAATAGATCCCAAAAGCAGAGCACTGCCCAAAGCTACAGATAAAAATCGAAAAAAGGCTGTCAAAGAGAGACGAAACTCCACAGAATCATCCACAACCACTGTTTCTTCATCTTCTTGTTCATCTAGCTTCTCATCATCTCTTGAATACAACAAAGCAGCTCAGCAAGAACAATCCTTGTCTGGCCAAACAATTTACAATGACAGACACACTCGGGACCTGTCCATGAACAAACCGAATATTTCAAAGCCCTTAAGCCAGCAATCATTTGACTCAACCTACAGAGAAGCCCGTGGCATTTCAGTCAGACCTGGAGGAAAAGATGGAGTAGGTCATAGATTGAAATACATAGACTCCCCAAGGCCTTCACAACCACTAAAACCCATCAAGCCAAGGGTTTCTTGTGGCGAGTCATTTCAAGTTCATGCCAAGCTTCGGGAAGCACATCGAAATTCCAACGAGGAGAAGGATGGTTGCATGCAATTGGCGCCAAAAGAAGCAAGGAGGCTGTCTTATGATGAAAGGGCATCACGAGATACAGTGAAATCCACAACAAAACTCAAAGAACTCCCAAGGCTTTCTTTGGACAGCAAAGAACGTTCCATTAGGAGGGCTTGTAGCCCTGAAACAAGATCAAGTCATTTCTTCAAGGATCTGCAGAGGGAGAATGGGAACTGTGACAAAATGCTTGACCTGCAGCCAGAACCCGGAAGTTCTAAAAGACCGAATGTTGTTGCAAAGTTGATGGGCTTGGATCTCTCAGATTCAGTGTCAACCAGTGTTACTCCATTGAGGCTGATTAGTACCTGTCCATCTGATAGATTTGATCCCTTGTCCAAATCATTGAGAAAAACAGATGAATCCAAGCAAGATGTTTTGTCTGGGTTCCCAAGAAATACGCAGAAGAGCTTCAGCTCACCCCAGAGGAGAAGTGCCAATTCAGTCATGCAGCCCACCGCAAATTCCAAGTTTCCAATAGAAACAGCTCCTTGGAGGCAGCCACATGGAAGCAAAGGTCCTCCTCAATCAACTTTCAACTGTCAAGAAGAACCTACAAAAGCACCAAAGTCATCACCTTCAGTATATGGTGAAATGGAGAAAAGACTAGCAGAACTAGAGTTCAAGAAATCAGGAAAGGACCTCCGAGCTCTTAAACAGATACTTGAAGCAATGCAGAAGAGCAAGCAAAACTCAGCGGACAAAAAAGAATCCTCAAATTTTGCCTCTCAAGTAAGCAACAAAAGTGGTTTGTGTGAGAGCACAATATCAGCAAGCAAGAGAAATACAAAACGTAGCCCATCACTTCCAGCCACAGCCATGGGTTCCAAATCCCCAAAGAGTTGCAAATCACCAATCATCATCATGAAACCCGGTAAACTCATGGAGAAAACACACAACTCTGCTTCCACGGTGATCTCCATGGACAACAGATCATGTCCGCGGAGGCTTCAGACTAGCAACCCTGGTGACAACAGAAAGGAATTGCTTGACAGGAAAGCCAAAGATTTGACTCCAAGAAACATTCATACTAGTGATTCTTTCAATGGACGTCTTCGCTCCACTGATAAGAATTCTAATGTGAGAACTTCTAAAGCTGCACAAAAACCAAAGATGCCCCAGAGTGAAGAAAATTCCCCGGGCCCAAGTAGGAGCATCACGAGCCCAAGACTGCAAAACAGAAGATTTGGATTGGAGAAGCAATCTGCTCCAACCACTCTATCATCAGATTCAAGCATGACCAGAAGGCAACACAGTAGGCAATCATTAGAAGCAAGCACCCCGGGTAGACAACTCGGGCCAAAATCTCCCAGATTTCATCAAAGCAATTGCCAACTGAGCGAGACTAGCACCAGTACAAGAGCTATGAGTCACCAAGATGATACCACTTCTCAGCAATCTGAAAGCAACACCAGCTTGGCCTCACATGCAGACACAGAAGCCACAAGCATTCATCAGTCAGATGAGATTAGAGATACTTACATGAAGCAGCACAGCCAAAAGCAAAACGTAAGCGTGTTCTGGCTCTCATTCGTTCCAACAAGTAATCTGCTATTCTGCTTAATAAACGGGTTATTTTATTTTCTTTCATGCAGAGGCCAGCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0008017 GO:0008092 GO:0008150 GO:0015631 GO:0022603 GO:0022604 GO:0040008 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051510 GO:0051513 GO:0065007

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

758

Amino Acids

84.67

Weight (kDa)

10.0

Isoelectric Point (pI)

68.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004546)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46710 FvH4_6g46710 FvH4_6g46710 FvH4_6g46710
malus_domestica	MD09G1068400.v1.1 MD17G1061300.v1.1
prunus_persica	Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1
pyrus_communis	pycom12433g00110 pycom12433g00120 pycom17g06120
rosa_chinensis	RchiOBHm_Chr2g0165601
rosa_laevigata	RLG00000021542
rosa_multiflora	Rmu_co8268985.1_g000001 Rmu_co8395029.1_g000001 Rmu_sc0005425.1_g000021 Rmu_sc0035818.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085700
rosa_rugosa	Rorug02G0516300 Rorug02G0516400 Rorug02G0516400 Rorug02G0516400
rosa_samantha	Rh2AG582500 Rh2BG594600 Rh2CG564500 Rh2DG604500
rosa_wichuraiana	Rw0G016060 Rw2G048590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1723
Acc36I	ACCTGC	1 cut(s)	873
AccB1I	GGYRCC	1 cut(s)	658
AccBSI	CCGCTC	1 cut(s)	72
AccI	GTMKAC	1 cut(s)	1957
AccII	CGCG	1 cut(s)	1612
AciI	CCGC	5 cut(s)	72, 1128, 1367, 1610, 1612
AclI	AACGTT	1 cut(s)	769
AclWI	GGATC	4 cut(s)	173, 831, 933, 992
AcoI	YGGCCR	3 cut(s)	112, 127, 355
AcsI	RAATTY	5 cut(s)	622, 1132, 1387, 1741, 1801
AcuI	CTGAAG	3 cut(s)	1066, 1233, 1604
AcyI	GRCGYC	2 cut(s)	659, 1720
AfaI	GTAC	2 cut(s)	976, 2026
AfiI	CCNNNNNNNGG	3 cut(s)	606, 780, 878
AflII	CTTAAG	1 cut(s)	424
AhlI	ACTAGT	1 cut(s)	1700
AjnI	CCWGG	3 cut(s)	151, 481, 1633
Alw21I	GWGCWC	3 cut(s)	196, 1321, 1433
Alw26I	GTCTC	3 cut(s)	136, 235, 2006
AlwI	GGATC	4 cut(s)	173, 831, 933, 992
Ama87I	CYCGRG	4 cut(s)	384, 1807, 1951, 1964
AoxI	GGCC	8 cut(s)	112, 127, 355, 533, 1810, 1967, 2088, 2266
ApaI	GGGCCC	1 cut(s)	1814
ApeKI	GCWGC	6 cut(s)	329, 868, 1120, 1168, 1766, 2158
ApoI	RAATTY	5 cut(s)	622, 1132, 1387, 1741, 1801
Asp700I	GAANNNNTTC	1 cut(s)	1079
AspLEI	GCGC	1 cut(s)	661
AspS9I	GGNCC	6 cut(s)	388, 1187, 1309, 1810, 1811, 1967
AsuC2I	CCSGG	6 cut(s)	879, 1542, 1808, 1809, 1952, 1953
AsuHPI	GGTGA	8 cut(s)	167, 1080, 1236, 1271, 1512, 1594, 1649, 2033
AvaI	CYCGRG	4 cut(s)	384, 1807, 1951, 1964
AvaII	GGWCC	3 cut(s)	388, 1187, 1309
BaeGI	GKGCMC	1 cut(s)	1814
BalI	TGGCCA	2 cut(s)	129, 357
BanI	GGYRCC	1 cut(s)	658
BanII	GRGCYC	3 cut(s)	1321, 1814, 1835
BauI	CACGAG	2 cut(s)	702, 1828
BbsI	GAAGAC	1 cut(s)	1715
Bbv12I	GWGCWC	3 cut(s)	196, 1321, 1433
BbvI	GCAGC	6 cut(s)	341, 880, 1132, 1180, 1753, 2170
BccI	CCATC	6 cut(s)	488, 563, 635, 910, 991, 1477
BciT130I	CCWGG	3 cut(s)	153, 483, 1635
BcnI	CCSGG	6 cut(s)	879, 1542, 1808, 1809, 1952, 1953
BcoDI	GTCTC	3 cut(s)	136, 235, 2006
BcuI	ACTAGT	1 cut(s)	1700
BfaI	CTAG	6 cut(s)	297, 1277, 1286, 1626, 1701, 2016
BfmI	CTRYAG	4 cut(s)	207, 451, 827, 866
BfoI	RGCGCY	1 cut(s)	662
BfrI	CTTAAG	1 cut(s)	424
BfuAI	ACCTGC	1 cut(s)	873
BisI	GCNGC	6 cut(s)	330, 869, 1121, 1169, 1767, 2159
BlpI	GCTNAGC	1 cut(s)	333
BlsI	GCNGC	6 cut(s)	331, 870, 1122, 1170, 1768, 2160
Bme1390I	CCNGG	9 cut(s)	153, 483, 879, 1542, 1635, 1808, 1809, 1952, 1953
Bme18I	GGWCC	3 cut(s)	388, 1187, 1309
BmeT110I	CYCGRG	4 cut(s)	384, 1807, 1951, 1964
BmgT120I	GGNCC	6 cut(s)	388, 1187, 1309, 1810, 1811, 1967
BmiI	GGNNCC	5 cut(s)	389, 660, 1058, 1495, 1812
BmrFI	CCNGG	9 cut(s)	153, 483, 879, 1542, 1635, 1808, 1809, 1952, 1953
BmsI	GCATC	4 cut(s)	129, 707, 1773, 1833
BpiI	GAAGAC	1 cut(s)	1715
BplI	GAGNNNNNCTC	2 cut(s)	133, 165
BpmI	CTGGAG	2 cut(s)	135, 504
Bpu1102I	GCTNAGC	1 cut(s)	333
BpuEI	CTTGAG	1 cut(s)	1383
BpuMI	CCSGG	6 cut(s)	879, 1542, 1808, 1809, 1952, 1953
BsaBI	GATNNNNATC	2 cut(s)	36, 216
BsaHI	GRCGYC	2 cut(s)	659, 1720
BsaXI	ACNNNNNCTCC	4 cut(s)	509, 539, 772, 802
Bsc4I	CCNNNNNNNGG	3 cut(s)	606, 780, 878
Bse118I	RCCGGY	1 cut(s)	96
Bse1I	ACTGG	2 cut(s)	948, 2022
Bse3DI	GCAATG	1 cut(s)	1347
Bse8I	GATNNNNATC	2 cut(s)	36, 216
BseBI	CCWGG	3 cut(s)	153, 483, 1635
BseGI	GGATG	2 cut(s)	260, 646
BseJI	GATNNNNATC	2 cut(s)	36, 216
BseLI	CCNNNNNNNGG	3 cut(s)	606, 780, 878
BseMI	GCAATG	1 cut(s)	1347
BseMII	CTCAG	5 cut(s)	347, 945, 1377, 1997, 2075
BseNI	ACTGG	2 cut(s)	948, 2022
BseRI	GAGGAG	3 cut(s)	647, 1111, 1182
BseSI	GKGCMC	1 cut(s)	1814
BseX3I	CGGCCG	1 cut(s)	112
BseXI	GCAGC	6 cut(s)	341, 880, 1132, 1180, 1753, 2170
BsgI	GTGCAG	1 cut(s)	1752
Bsh1236I	CGCG	1 cut(s)	1612
Bsh1285I	CGRYCG	1 cut(s)	115
BshFI	GGCC	8 cut(s)	114, 129, 357, 535, 1812, 1969, 2090, 2268
BshNI	GGYRCC	1 cut(s)	658
BsiEI	CGRYCG	1 cut(s)	115
BsiHKAI	GWGCWC	3 cut(s)	196, 1321, 1433
BsiHKCI	CYCGRG	4 cut(s)	384, 1807, 1951, 1964
BsiSI	CCGG	7 cut(s)	97, 111, 115, 879, 1542, 1808, 1952
BslFI	GGGAC	1 cut(s)	401
BslI	CCNNNNNNNGG	3 cut(s)	606, 780, 878
BsmAI	GTCTC	3 cut(s)	136, 235, 2006
BsmBI	CGTCTC	1 cut(s)	235
BsmFI	GGGAC	1 cut(s)	401
BsmI	GAATGC	1 cut(s)	2118
BsnI	GGCC	8 cut(s)	114, 129, 357, 535, 1812, 1969, 2090, 2268
BsoBI	CYCGRG	4 cut(s)	384, 1807, 1951, 1964
Bsp120I	GGGCCC	1 cut(s)	1810
Bsp1286I	GDGCHC	5 cut(s)	196, 1321, 1433, 1814, 1835
Bsp143I	GATC	9 cut(s)	43, 91, 178, 803, 823, 925, 997, 1584, 1601
Bsp1720I	GCTNAGC	1 cut(s)	333
Bsp19I	CCATGG	2 cut(s)	1488, 1590
BspACI	CCGC	5 cut(s)	72, 1128, 1367, 1610, 1612
BspANI	GGCC	8 cut(s)	114, 129, 357, 535, 1812, 1969, 2090, 2268
BspCNI	CTCAG	5 cut(s)	346, 944, 1376, 1998, 2074
BspFNI	CGCG	1 cut(s)	1612
BspHI	TCATGA	1 cut(s)	1533
BspLI	GGNNCC	5 cut(s)	389, 660, 1058, 1495, 1812
BspMAI	CTGCAG	2 cut(s)	831, 870
BspMI	ACCTGC	1 cut(s)	873
BspPI	GGATC	4 cut(s)	173, 831, 933, 992
BspQI	GCTCTTC	2 cut(s)	1070, 1343
BspT107I	GGYRCC	1 cut(s)	658
BspTI	CTTAAG	1 cut(s)	424
BsrBI	CCGCTC	1 cut(s)	72
BsrDI	GCAATG	1 cut(s)	1347
BsrFI	RCCGGY	1 cut(s)	96
BsrI	ACTGG	2 cut(s)	948, 2022
BssAI	RCCGGY	1 cut(s)	96
BssMI	GATC	9 cut(s)	43, 91, 178, 803, 823, 925, 997, 1584, 1601
BssNI	GRCGYC	2 cut(s)	659, 1720
BssSI	CACGAG	2 cut(s)	702, 1828
BssT1I	CCWWGG	6 cut(s)	530, 563, 743, 1160, 1488, 1590
Bst2BI	CACGAG	2 cut(s)	702, 1828
Bst2UI	CCWGG	3 cut(s)	153, 483, 1635
Bst4CI	ACNGT	7 cut(s)	134, 274, 712, 848, 1211, 1582, 1925
Bst6I	CTCTTC	2 cut(s)	1070, 1343
BstACI	GRCGYC	2 cut(s)	659, 1720
BstAFI	CTTAAG	1 cut(s)	424
BstC8I	GCNNGC	7 cut(s)	98, 431, 650, 1355, 1444, 1945, 2270
BstDEI	CTNAG	5 cut(s)	333, 931, 1363, 2006, 2061
BstDSI	CCRYGG	5 cut(s)	463, 1488, 1578, 1590, 1610
BstF5I	GGATG	2 cut(s)	260, 646
BstFNI	CGCG	1 cut(s)	1612
BstH2I	RGCGCY	1 cut(s)	662
BstHHI	GCGC	1 cut(s)	661
BstKTI	GATC	9 cut(s)	46, 94, 181, 806, 826, 928, 1000, 1587, 1604
BstMAI	GTCTC	3 cut(s)	136, 235, 2006
BstMBI	GATC	9 cut(s)	43, 91, 178, 803, 823, 925, 997, 1584, 1601
BstMCI	CGRYCG	1 cut(s)	115
BstMWI	GCNNNNNNNGC	8 cut(s)	126, 658, 865, 1830, 2007, 2016, 2082, 2096
BstNI	CCWGG	3 cut(s)	153, 483, 1635
BstNSI	RCATGY	2 cut(s)	652, 2099
BstSCI	CCNGG	9 cut(s)	151, 481, 877, 1540, 1633, 1806, 1807, 1950, 1951
BstSFI	CTRYAG	4 cut(s)	207, 451, 827, 866
BstSLI	GKGCMC	1 cut(s)	1814
BstUI	CGCG	1 cut(s)	1612
BstV1I	GCAGC	6 cut(s)	341, 880, 1132, 1180, 1753, 2170
BstV2I	GAAGAC	1 cut(s)	1715
BstX2I	RGATCY	3 cut(s)	178, 823, 925
BstXI	CCANNNNNNTGG	1 cut(s)	1489
BstYI	RGATCY	3 cut(s)	178, 823, 925
BstZI	CGGCCG	1 cut(s)	112
BsuRI	GGCC	8 cut(s)	114, 129, 357, 535, 1812, 1969, 2090, 2268
BtgI	CCRYGG	5 cut(s)	463, 1488, 1578, 1590, 1610
BtsCI	GGATG	2 cut(s)	260, 646
BtsI	GCAGTG	1 cut(s)	194
BtsIMutI	CAGTG	6 cut(s)	194, 270, 717, 945, 955, 1731
BveI	ACCTGC	1 cut(s)	873
Cac8I	GCNNGC	7 cut(s)	98, 431, 650, 1355, 1444, 1945, 2270
CciI	TCATGA	1 cut(s)	1533
CfoI	GCGC	1 cut(s)	661
Cfr10I	RCCGGY	1 cut(s)	96
Cfr13I	GGNCC	6 cut(s)	388, 1187, 1309, 1810, 1811, 1967
Cfr42I	CCGCGG	1 cut(s)	1613
Cfr9I	CCCGGG	2 cut(s)	1807, 1951
Csp6I	GTAC	2 cut(s)	975, 2025
CspCI	CAANNNNNGTGG	2 cut(s)	1396, 1431
CviQI	GTAC	2 cut(s)	975, 2025
DdeI	CTNAG	5 cut(s)	333, 931, 1363, 2006, 2061
DinI	GGCGCC	1 cut(s)	660
DpnI	GATC	9 cut(s)	45, 93, 180, 805, 825, 927, 999, 1586, 1603
DpnII	GATC	9 cut(s)	43, 91, 178, 803, 823, 925, 997, 1584, 1601
EaeI	YGGCCR	3 cut(s)	112, 127, 355
EagI	CGGCCG	1 cut(s)	112
Eam1104I	CTCTTC	2 cut(s)	1070, 1343
EarI	CTCTTC	2 cut(s)	1070, 1343
Ecl136II	GAGCTC	1 cut(s)	1319
EclXI	CGGCCG	1 cut(s)	112
Eco130I	CCWWGG	6 cut(s)	530, 563, 743, 1160, 1488, 1590
Eco147I	AGGCCT	1 cut(s)	535
Eco24I	GRGCYC	3 cut(s)	1321, 1814, 1835
Eco47I	GGWCC	3 cut(s)	388, 1187, 1309
Eco52I	CGGCCG	1 cut(s)	112
Eco53kI	GAGCTC	1 cut(s)	1319
Eco57I	CTGAAG	3 cut(s)	1066, 1233, 1604
Eco88I	CYCGRG	4 cut(s)	384, 1807, 1951, 1964
EcoICRI	GAGCTC	1 cut(s)	1319
EcoO109I	RGGNCCY	3 cut(s)	388, 1187, 1309
EcoRI	GAATTC	1 cut(s)	1741
EcoRII	CCWGG	3 cut(s)	151, 481, 1633
EcoT14I	CCWWGG	6 cut(s)	530, 563, 743, 1160, 1488, 1590
EcoT38I	GRGCYC	3 cut(s)	1321, 1814, 1835
EgeI	GGCGCC	1 cut(s)	660
EheI	GGCGCC	1 cut(s)	660
ErhI	CCWWGG	6 cut(s)	530, 563, 743, 1160, 1488, 1590
Esp3I	CGTCTC	1 cut(s)	235
FalI	AAGNNNNNCTT	4 cut(s)	556, 588, 736, 768
FaqI	GGGAC	1 cut(s)	401
FauI	CCCGC	1 cut(s)	65
FblI	GTMKAC	1 cut(s)	1957
Fnu4HI	GCNGC	6 cut(s)	330, 869, 1121, 1169, 1767, 2159
FokI	GGATG	2 cut(s)	247, 653
FriOI	GRGCYC	3 cut(s)	1321, 1814, 1835
Fsp4HI	GCNGC	6 cut(s)	330, 869, 1121, 1169, 1767, 2159
FspBI	CTAG	6 cut(s)	297, 1277, 1286, 1626, 1701, 2016
GlaI	GCGC	1 cut(s)	660
GluI	GCNGC	6 cut(s)	330, 869, 1121, 1169, 1767, 2159
GsuI	CTGGAG	2 cut(s)	135, 504
HaeII	RGCGCY	1 cut(s)	662
HaeIII	GGCC	8 cut(s)	114, 129, 357, 535, 1812, 1969, 2090, 2268
HapII	CCGG	7 cut(s)	97, 111, 115, 879, 1542, 1808, 1952
HhaI	GCGC	1 cut(s)	661
Hin1I	GRCGYC	2 cut(s)	659, 1720
Hin6I	GCGC	1 cut(s)	659
HinP1I	GCGC	1 cut(s)	659
HincII	GTYRAC	1 cut(s)	945
HindII	GTYRAC	1 cut(s)	945
HindIII	AAGCTT	1 cut(s)	602
HpaII	CCGG	7 cut(s)	97, 111, 115, 879, 1542, 1808, 1952
HphI	GGTGA	8 cut(s)	167, 1080, 1236, 1271, 1512, 1594, 1649, 2033
Hpy166II	GTNNAC	3 cut(s)	945, 1547, 1958
Hpy188I	TCNGA	9 cut(s)	29, 479, 934, 988, 1316, 1623, 1897, 2071, 2131
Hpy8I	GTNNAC	3 cut(s)	945, 1547, 1958
HpyAV	CCTTC	4 cut(s)	546, 631, 1257, 1908
HpyCH4III	ACNGT	7 cut(s)	134, 274, 712, 848, 1211, 1582, 1925
HpyCH4IV	ACGT	4 cut(s)	769, 1462, 1720, 2178
HpyF10VI	GCNNNNNNNGC	8 cut(s)	126, 658, 865, 1830, 2007, 2016, 2082, 2096
HpyF3I	CTNAG	5 cut(s)	333, 931, 1363, 2006, 2061
HpySE526I	ACGT	4 cut(s)	769, 1462, 1720, 2178
Hsp92I	GRCGYC	2 cut(s)	659, 1720
HspAI	GCGC	1 cut(s)	659
KasI	GGCGCC	1 cut(s)	658
KroI	GCCGGC	1 cut(s)	96
KroNI	GCCGGC	1 cut(s)	98
KspI	CCGCGG	1 cut(s)	1613
Kzo9I	GATC	9 cut(s)	43, 91, 178, 803, 823, 925, 997, 1584, 1601
LguI	GCTCTTC	2 cut(s)	1070, 1343
LmnI	GCTCC	5 cut(s)	117, 1162, 1733, 1821, 1882
Lsp1109I	GCAGC	6 cut(s)	341, 880, 1132, 1180, 1753, 2170
LweI	GCATC	4 cut(s)	129, 707, 1773, 1833
MaeI	CTAG	6 cut(s)	297, 1277, 1286, 1626, 1701, 2016
MaeII	ACGT	4 cut(s)	769, 1462, 1720, 2178
MaeIII	GTNAC	5 cut(s)	134, 848, 952, 1637, 2039
MalI	GATC	9 cut(s)	45, 93, 180, 805, 825, 927, 999, 1586, 1603
MbiI	CCGCTC	1 cut(s)	72
MboI	GATC	9 cut(s)	43, 91, 178, 803, 823, 925, 997, 1584, 1601
MboII	GAAGA	9 cut(s)	270, 276, 808, 1087, 1229, 1360, 1715, 1808, 1863
MfeI	CAATTG	2 cut(s)	653, 1996
MflI	RGATCY	3 cut(s)	178, 823, 925
MhlI	GDGCHC	5 cut(s)	196, 1321, 1433, 1814, 1835
MlsI	TGGCCA	2 cut(s)	129, 357
MluNI	TGGCCA	2 cut(s)	129, 357
Mly113I	GGCGCC	1 cut(s)	659
MlyI	GAGTC	5 cut(s)	437, 518, 590, 1675, 2047
MmeI	TCCRAC	3 cut(s)	651, 1904, 2231
Mox20I	TGGCCA	2 cut(s)	129, 357
MroNI	GCCGGC	1 cut(s)	96
MroXI	GAANNNNTTC	1 cut(s)	1079
MscI	TGGCCA	2 cut(s)	129, 357
MseI	TTAA	3 cut(s)	425, 1323, 2231
MslI	CAYNNNNRTG	4 cut(s)	1487, 1532, 1701, 2046
Msp20I	TGGCCA	2 cut(s)	129, 357
MspA1I	CMGCKG	3 cut(s)	85, 1367, 1612
MspCI	CTTAAG	1 cut(s)	424
MspI	CCGG	7 cut(s)	97, 111, 115, 879, 1542, 1808, 1952
MspR9I	CCNGG	9 cut(s)	153, 483, 879, 1542, 1635, 1808, 1809, 1952, 1953
MunI	CAATTG	2 cut(s)	653, 1996
Mva1269I	GAATGC	1 cut(s)	2118
MvaI	CCWGG	3 cut(s)	153, 483, 1635
MvnI	CGCG	1 cut(s)	1612
MwoI	GCNNNNNNNGC	8 cut(s)	126, 658, 865, 1830, 2007, 2016, 2082, 2096
NaeI	GCCGGC	1 cut(s)	98
NarI	GGCGCC	1 cut(s)	659
NciI	CCSGG	6 cut(s)	879, 1542, 1808, 1809, 1952, 1953
NcoI	CCATGG	2 cut(s)	1488, 1590
NdeII	GATC	9 cut(s)	43, 91, 178, 803, 823, 925, 997, 1584, 1601
NgoMIV	GCCGGC	1 cut(s)	96
NlaIV	GGNNCC	5 cut(s)	389, 660, 1058, 1495, 1812
NmuCI	GTSAC	4 cut(s)	134, 848, 1637, 2039
NspI	RCATGY	2 cut(s)	652, 2099
PaeI	GCATGC	1 cut(s)	652
PagI	TCATGA	1 cut(s)	1533
PceI	AGGCCT	1 cut(s)	535
PciSI	GCTCTTC	2 cut(s)	1070, 1343
PctI	GAATGC	1 cut(s)	2118
PdiI	GCCGGC	1 cut(s)	98
PdmI	GAANNNNTTC	1 cut(s)	1079
PfeI	GAWTC	7 cut(s)	37, 257, 935, 1031, 1379, 1706, 1898
PkrI	GCNGC	6 cut(s)	331, 870, 1122, 1170, 1768, 2160
PleI	GAGTC	5 cut(s)	437, 518, 589, 1675, 2046
PluTI	GGCGCC	1 cut(s)	662
PpsI	GAGTC	5 cut(s)	437, 518, 589, 1675, 2046
PpuMI	RGGWCCY	3 cut(s)	388, 1187, 1309
Psp124BI	GAGCTC	1 cut(s)	1321
Psp1406I	AACGTT	1 cut(s)	769
Psp5II	RGGWCCY	3 cut(s)	388, 1187, 1309
Psp6I	CCWGG	3 cut(s)	151, 481, 1633
PspGI	CCWGG	3 cut(s)	151, 481, 1633
PspN4I	GGNNCC	5 cut(s)	389, 660, 1058, 1495, 1812
PspOMI	GGGCCC	1 cut(s)	1810
PspPI	GGNCC	6 cut(s)	388, 1187, 1309, 1810, 1811, 1967
PspPPI	RGGWCCY	3 cut(s)	388, 1187, 1309
PstI	CTGCAG	2 cut(s)	831, 870
PsuI	RGATCY	3 cut(s)	178, 823, 925
PvuII	CAGCTG	1 cut(s)	85
RsaI	GTAC	2 cut(s)	976, 2026
RsaNI	GTAC	2 cut(s)	975, 2025
RseI	CAYNNNNRTG	4 cut(s)	1487, 1532, 1701, 2046
SacI	GAGCTC	1 cut(s)	1321
SacII	CCGCGG	1 cut(s)	1613
SapI	GCTCTTC	2 cut(s)	1070, 1343
SaqAI	TTAA	3 cut(s)	425, 1323, 2231
SatI	GCNGC	6 cut(s)	330, 869, 1121, 1169, 1767, 2159
Sau3AI	GATC	9 cut(s)	43, 91, 178, 803, 823, 925, 997, 1584, 1601
Sau96I	GGNCC	6 cut(s)	388, 1187, 1309, 1810, 1811, 1967
SchI	GAGTC	5 cut(s)	437, 518, 590, 1675, 2047
ScrFI	CCNGG	9 cut(s)	153, 483, 879, 1542, 1635, 1808, 1809, 1952, 1953
SduI	GDGCHC	5 cut(s)	196, 1321, 1433, 1814, 1835
SfaNI	GCATC	4 cut(s)	129, 707, 1773, 1833
SfcI	CTRYAG	4 cut(s)	207, 451, 827, 866
SfoI	GGCGCC	1 cut(s)	660
Sfr303I	CCGCGG	1 cut(s)	1613
SgrBI	CCGCGG	1 cut(s)	1613
SinI	GGWCC	3 cut(s)	388, 1187, 1309
SmaI	CCCGGG	2 cut(s)	1809, 1953
SmiMI	CAYNNNNRTG	4 cut(s)	1487, 1532, 1701, 2046
SmlI	CTYRAG	2 cut(s)	424, 1398
SmoI	CTYRAG	2 cut(s)	424, 1398
SpeI	ACTAGT	1 cut(s)	1700
SphI	GCATGC	1 cut(s)	652
SseBI	AGGCCT	1 cut(s)	535
SsiI	CCGC	5 cut(s)	72, 1128, 1367, 1610, 1612
SspDI	GGCGCC	1 cut(s)	658
SspI	AATATT	1 cut(s)	412
SspMI	CTAG	6 cut(s)	297, 1277, 1286, 1626, 1701, 2016
SstI	GAGCTC	1 cut(s)	1321
StuI	AGGCCT	1 cut(s)	535
StyD4I	CCNGG	9 cut(s)	151, 481, 877, 1540, 1633, 1806, 1807, 1950, 1951
StyI	CCWWGG	6 cut(s)	530, 563, 743, 1160, 1488, 1590
TaaI	ACNGT	7 cut(s)	134, 274, 712, 848, 1211, 1582, 1925
TaiI	ACGT	4 cut(s)	772, 1465, 1723, 2181
TaqI	TCGA	2 cut(s)	220, 619
TaqII	GACCGA	1 cut(s)	910
TatI	WGTACW	1 cut(s)	2024
TfiI	GAWTC	7 cut(s)	37, 257, 935, 1031, 1379, 1706, 1898
Tru1I	TTAA	3 cut(s)	425, 1323, 2231
Tru9I	TTAA	3 cut(s)	425, 1323, 2231
TscAI	CASTG	6 cut(s)	201, 277, 717, 945, 955, 1738
TseFI	GTSAC	4 cut(s)	134, 848, 1637, 2039
TseI	GCWGC	6 cut(s)	329, 868, 1120, 1168, 1766, 2158
Tsp45I	GTSAC	4 cut(s)	134, 848, 1637, 2039
TspMI	CCCGGG	2 cut(s)	1807, 1951
TspRI	CASTG	6 cut(s)	201, 277, 717, 945, 955, 1738
Vha464I	CTTAAG	1 cut(s)	424
VpaK11BI	GGWCC	3 cut(s)	388, 1187, 1309
XapI	RAATTY	5 cut(s)	622, 1132, 1387, 1741, 1801
XceI	RCATGY	2 cut(s)	652, 2099
XcmI	CCANNNNNNNNNTGG	1 cut(s)	56
XmaI	CCCGGG	2 cut(s)	1807, 1951
XmiI	GTMKAC	1 cut(s)	1957
XmnI	GAANNNNTTC	1 cut(s)	1079
XspI	CTAG	6 cut(s)	297, 1277, 1286, 1626, 1701, 2016
ZraI	GACGTC	1 cut(s)	1721

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.