Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0004546

Physical Location & Seq

Genomic Coordinates Forward (+)

81514478 .. 81523087

Gene Structure 8610 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG582500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2766 bp

ATGAACAAACAGAATATTTCAAAGCCCTTAAGCCAGCAATCATTTGACTCAACCTACAGAGAAGCCCGTGGCATTTCAGTCAGACCTGGAGGAAAAGATGGAGTAGGTCATATATTGAAATACATCGACTCCCCAAGGCCTTCACAACCACTAAAACCCATCAAGCCAAGGGTTTCTGGTGGCGAGTCATTTCAAGTTCATGCCAAGCTTCGGGAAGCACATCGAAATTCCAACGAGGAGAAGGATGGTTGCATGCGATTTGCGCCAAAAGAAGCAAGGAGGCTGTCTTATGATGAAAGGGCATCACGAGATACAGTGAAATCCACAACAAAACTCAAAGAACTCCCAAGGCTTTCTTTGGACAGCAAAGAACGTTCCATTAGGAGGGCTTGTAGCCCCGAAACAAGATCAAGTCATTTCTTCAAGGATCTGCAGAGGGAGAATGGGAACTGTGGCAAAATGCTTGACCTGCAGCCAGAACCCGGAAGTTCTAAAAGACCGAATGTTGTTGCAAAGTTGATGGGCTTGGATCTCTCAGATTCAGTGTCAACCAGTGTTACTCCATTGAGGCTGATTAGTACCTGTCCATCTGATAGATTTGATCCCTTGTCCAGATCATTGAGAAAAACAGATGAATCCAAGCAAGAAGTTTTGTCTGGGTTCCCAAGAAATACGCAGAAGAGCTTCAGCTCACCCCAGAGGAGAAGTGCCAATTCAGTCATGCAGCCCACCGCAAATTCCAAGTTTCCAATAGAAACAGCTCCTTGGAGGCAGCCACATGGAAGCAAAGGTCCTCCTCAATCAACTTTCAACTGTCAAGAAGAACCTACAAAAGCACCAAAGTCATCACCTTCAGTATATGGTGAAATGGAGAAAAGACTAGCAGAACTAGAGTTCAAGAAATCAGGAAAGGACCTCCGAGCTCTTAAACAGATACTTGAAGCAATGCAGAAGAGCAAGGAAAACTCGGAGGACAAAAAAGAAGCCTCAAATTTTGCCTCTCAAGTAAGCAACAAAACTGGTTTGTCTGAGAGCACAATATCAGCAAGCAAGAGAAATACAAAACGTAGCCCATCACTTCCAGCCACAGCCATGGGTTCCAAATCCCCAAAGAGTTACAAATCACCAATCATCATCATGAAACCCGATAAACTCATGGAGAAAACACACAACTCTGCTTCCACGGTGATCTCCATGGACAGCAGATCATGTCCACGGAGGCTTCAGACTAGCAACCCTGGTGACAACAGAAAGGAATTGCTTGACAGGAAAGCCAAAGACTTGACTCCAAGAAACATTCATACTAGTGATTCTTTCAATGGACGTCTTCGCTCCACTGATAAGAATTCTAATGTGAGAACTTCTAAAGCTGCACAAAAACCAAAGATGCCCCAGAGTGAAGAAAATTCCCCGGGCCCAAGTAGGAGCATCACGAGCCCAAGACTGCAAAACAGAAGATTTGGATTGGAGAAGCAATCTGCTCCAACCACTCTATCATCAGATTCAAGCATGACCAGAAGGCAACACAGTAGGCAATCATTAGAAGCAAGCACCCCGGGTAGAAAACTCGGGCCAAAATCTCCCAGTTTTCATCAAAGCAATTGCCAACTGATTGAGACTAGCACCAGTACAAGAGCTATGAGTCACCAAGATGATACCACTTCTCAGCAATCTGAAAGCAACACCAGCTTGGCCTCACATGCAGACACAGAAGCCACAAGCAATCATCAGTCAGATGAGATTAGAGATACTTACATGAAGCAGCACAGCCAAAAGCAAAACAGGCCAGCAGTAGGGTTGAGTGATGATAGGTTAACAGCAGAAACTGGGAAAGCTTCCTTAGAACAACCAAGTCCTATCTCCGTTCTTGATTCTACATTCTATAGGGACGACTCACCTTCTCCTGTGAAGAAGATATCAAATGCCTTTAAAGATGATGGTGGGCAAAATCTGGATGAAGCAGAGTATGGACCAATGGACCTAGGTCTGATATCCAACAGTACAACGCCCAGTCTTGGTGCAGAGATTGACCATATAAGGTTAGAGAACCTGAAGCACCTGATTCATAATCATCGACATATGAGCAGCACAAATGAAGAACCCATCTTCGGGCACATTACTTTCCTCTGTGACCGCTCAAATCCAGACCACATGTACATTTCAGATATATTGCTAGCATCAGGAATTCTTAGGTATCTCGAATCTGCGTGGACAACCATTGAGCTCCAGACATTAGAACACCTGATCAACCCTAATTTGTTCCTTGCACTGGAAGAAATTAGGGCAGATATAGAGCCTTGGGATGATGGAAAGAGATGTGAAAAGATTCTCCAGTCCCAATCAGATGAAAAAATTCAAAGAAAGCTAGTCTTCGATGTTGTTAAAGAATTCCTAGTTCAAAAATTAGTTGTGGAGAACTCTTTCAAGCAGTGGTGCTCACCAAACAAGCTGCCAGAAGGGAAACCAAGAGGGCAGCAGCTTTTGACAGAATTGTGCTCCCAGGTTGATCAGCTACAAAGACGCAACTTGAATGGCAACCTAGATGATGAAGATGAAAGTTTGACAAGCATCTTGTTGGAAAATATCATGGATCAATCACAGAATTGGACAGTGTATGATGGTGAAATTCCGAGTGCAGTGTTGGATGTTGAGCGATTGATCTTTAAAGACTTGATAACTGAAATTGTGAGCAGTGATGCAGTTGACCATGTGGGTTGGTCTGGTGGGCATTGTAGGCAACTGTTTTCCAAGAAGGGGCTCTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0008017 GO:0008092 GO:0008150 GO:0015631 GO:0022603 GO:0022604 GO:0040008 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051510 GO:0051513 GO:0065007

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

921

Amino Acids

103.17

Weight (kDa)

9.1

Isoelectric Point (pI)

65.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4378	PF14309	716 - 894	2e-26	Domain of unknown function (DUF4378)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004546)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46710 FvH4_6g46710 FvH4_6g46710 FvH4_6g46710
malus_domestica	MD09G1068400.v1.1 MD17G1061300.v1.1
prunus_persica	Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1
pyrus_communis	pycom12433g00110 pycom12433g00120 pycom17g06120
rosa_chinensis	RchiOBHm_Chr2g0165601
rosa_laevigata	RLG00000021542
rosa_multiflora	Rmu_co8268985.1_g000001 Rmu_co8395029.1_g000001 Rmu_sc0005425.1_g000021 Rmu_sc0035818.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085700
rosa_rugosa	Rorug02G0516300 Rorug02G0516400 Rorug02G0516400 Rorug02G0516400
rosa_samantha	Rh2AG582500 Rh2BG594600 Rh2CG564500 Rh2DG604500
rosa_wichuraiana	Rw0G016060 Rw2G048590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1327
Acc36I	ACCTGC	1 cut(s)	477
AccBSI	CCGCTC	1 cut(s)	2136
AciI	CCGC	2 cut(s)	732, 2134
AclI	AACGTT	1 cut(s)	373
AclWI	GGATC	4 cut(s)	435, 537, 596, 2598
AcsI	RAATTY	9 cut(s)	226, 736, 991, 1345, 1405, 2184, 2352, 2387, 2625
AcuI	CTGAAG	4 cut(s)	670, 837, 1208, 2072
AcyI	GRCGYC	1 cut(s)	1324
AfaI	GTAC	4 cut(s)	580, 1630, 2002, 2156
AfiI	CCNNNNNNNGG	9 cut(s)	210, 384, 482, 1793, 2015, 2108, 2109, 2269, 2754
AflII	CTTAAG	1 cut(s)	28
AflIII	ACRYGT	1 cut(s)	2151
AhlI	ACTAGT	1 cut(s)	1304
AjnI	CCWGG	3 cut(s)	85, 1237, 2499
Alw21I	GWGCWC	5 cut(s)	925, 1037, 2226, 2438, 2498
Alw26I	GTCTC	1 cut(s)	1610
AlwI	GGATC	4 cut(s)	435, 537, 596, 2598
AlwNI	CAGNNNCTG	1 cut(s)	1826
Ama87I	CYCGRG	3 cut(s)	1411, 1555, 1568
AoxI	GGCC	5 cut(s)	137, 1414, 1571, 1692, 1784
ApaI	GGGCCC	1 cut(s)	1418
ApeKI	GCWGC	9 cut(s)	472, 724, 772, 1370, 1762, 2085, 2449, 2473, 2476
ApoI	RAATTY	9 cut(s)	226, 736, 991, 1345, 1405, 2184, 2352, 2387, 2625
Asp700I	GAANNNNTTC	4 cut(s)	683, 2325, 2352, 2420
AspA2I	CCTAGG	1 cut(s)	1981
AspLEI	GCGC	1 cut(s)	265
AspS9I	GGNCC	7 cut(s)	791, 913, 1414, 1415, 1571, 1970, 1978
AsuC2I	CCSGG	5 cut(s)	483, 1412, 1413, 1556, 1557
AsuNHI	GCTAGC	1 cut(s)	2173
AvaI	CYCGRG	3 cut(s)	1411, 1555, 1568
AvaII	GGWCC	4 cut(s)	791, 913, 1970, 1978
AvrII	CCTAGG	1 cut(s)	1981
BaeGI	GKGCMC	2 cut(s)	1418, 2115
BanII	GRGCYC	5 cut(s)	925, 1418, 1439, 2226, 2760
BauI	CACGAG	2 cut(s)	306, 1432
BbsI	GAAGAC	2 cut(s)	1319, 2362
Bbv12I	GWGCWC	5 cut(s)	925, 1037, 2226, 2438, 2498
BbvI	GCAGC	9 cut(s)	484, 736, 784, 1357, 1774, 2097, 2436, 2485, 2488
BciT130I	CCWGG	3 cut(s)	87, 1239, 2501
BclI	TGATCA	2 cut(s)	2244, 2506
BcnI	CCSGG	5 cut(s)	483, 1412, 1413, 1556, 1557
BcoDI	GTCTC	1 cut(s)	1610
BcuI	ACTAGT	1 cut(s)	1304
BfmI	CTRYAG	4 cut(s)	55, 431, 470, 1882
BfrI	CTTAAG	1 cut(s)	28
BfuAI	ACCTGC	1 cut(s)	477
BisI	GCNGC	9 cut(s)	473, 725, 773, 1371, 1763, 2086, 2450, 2474, 2477
BlnI	CCTAGG	1 cut(s)	1981
BlsI	GCNGC	9 cut(s)	474, 726, 774, 1372, 1764, 2087, 2451, 2475, 2478
Bme1390I	CCNGG	8 cut(s)	87, 483, 1239, 1412, 1413, 1556, 1557, 2501
Bme18I	GGWCC	4 cut(s)	791, 913, 1970, 1978
BmeT110I	CYCGRG	3 cut(s)	1411, 1555, 1568
BmgT120I	GGNCC	7 cut(s)	791, 913, 1414, 1415, 1571, 1970, 1978
BmiI	GGNNCC	3 cut(s)	662, 1099, 1416
BmrFI	CCNGG	8 cut(s)	87, 483, 1239, 1412, 1413, 1556, 1557, 2501
BmrI	ACTGGG	3 cut(s)	1578, 1836, 2004
BmsI	GCATC	6 cut(s)	311, 1377, 1437, 2186, 2577, 2686
BmtI	GCTAGC	1 cut(s)	2177
BmuI	ACTGGG	3 cut(s)	1578, 1836, 2004
BoxI	GACNNNNGTC	1 cut(s)	1983
BpiI	GAAGAC	2 cut(s)	1319, 2362
BpmI	CTGGAG	3 cut(s)	108, 2210, 2315
BpuEI	CTTGAG	1 cut(s)	987
BpuMI	CCSGG	5 cut(s)	483, 1412, 1413, 1556, 1557
BsaHI	GRCGYC	1 cut(s)	1324
BsaXI	ACNNNNNCTCC	4 cut(s)	113, 143, 376, 406
Bsc4I	CCNNNNNNNGG	9 cut(s)	210, 384, 482, 1793, 2015, 2108, 2109, 2269, 2754
Bse1I	ACTGG	8 cut(s)	552, 1024, 1584, 1626, 1831, 2010, 2274, 2332
Bse3DI	GCAATG	1 cut(s)	951
BseBI	CCWGG	3 cut(s)	87, 1239, 2501
BseGI	GGATG	4 cut(s)	250, 1960, 2308, 2650
BseLI	CCNNNNNNNGG	9 cut(s)	210, 384, 482, 1793, 2015, 2108, 2109, 2269, 2754
BseMI	GCAATG	1 cut(s)	951
BseMII	CTCAG	3 cut(s)	549, 1020, 1679
BseNI	ACTGG	8 cut(s)	552, 1024, 1584, 1626, 1831, 2010, 2274, 2332
BseRI	GAGGAG	3 cut(s)	251, 715, 786
BseSI	GKGCMC	2 cut(s)	1418, 2115
BseXI	GCAGC	9 cut(s)	484, 736, 784, 1357, 1774, 2097, 2436, 2485, 2488
BsgI	GTGCAG	3 cut(s)	1356, 2040, 2655
BshFI	GGCC	5 cut(s)	139, 1416, 1573, 1694, 1786
BsiHKAI	GWGCWC	5 cut(s)	925, 1037, 2226, 2438, 2498
BsiHKCI	CYCGRG	3 cut(s)	1411, 1555, 1568
BsiSI	CCGG	3 cut(s)	483, 1412, 1556
BslFI	GGGAC	2 cut(s)	1901, 2320
BslI	CCNNNNNNNGG	9 cut(s)	210, 384, 482, 1793, 2015, 2108, 2109, 2269, 2754
BsmAI	GTCTC	1 cut(s)	1610
BsmFI	GGGAC	2 cut(s)	1901, 2320
BsnI	GGCC	5 cut(s)	139, 1416, 1573, 1694, 1786
BsoBI	CYCGRG	3 cut(s)	1411, 1555, 1568
Bsp120I	GGGCCC	1 cut(s)	1414
Bsp1286I	GDGCHC	9 cut(s)	925, 1037, 1418, 1439, 2115, 2226, 2438, 2498, 2760
Bsp1407I	TGTACA	1 cut(s)	2154
Bsp19I	CCATGG	2 cut(s)	1092, 1194
BspACI	CCGC	2 cut(s)	732, 2134
BspANI	GGCC	5 cut(s)	139, 1416, 1573, 1694, 1786
BspCNI	CTCAG	3 cut(s)	548, 1021, 1678
BspHI	TCATGA	1 cut(s)	1137
BspLI	GGNNCC	3 cut(s)	662, 1099, 1416
BspMAI	CTGCAG	2 cut(s)	435, 474
BspMI	ACCTGC	1 cut(s)	477
BspOI	GCTAGC	1 cut(s)	2177
BspPI	GGATC	4 cut(s)	435, 537, 596, 2598
BspQI	GCTCTTC	2 cut(s)	674, 947
BspTI	CTTAAG	1 cut(s)	28
BsrBI	CCGCTC	1 cut(s)	2136
BsrDI	GCAATG	1 cut(s)	951
BsrGI	TGTACA	1 cut(s)	2154
BsrI	ACTGG	8 cut(s)	552, 1024, 1584, 1626, 1831, 2010, 2274, 2332
BssNI	GRCGYC	1 cut(s)	1324
BssSI	CACGAG	2 cut(s)	306, 1432
BssT1I	CCWWGG	8 cut(s)	134, 167, 347, 764, 1092, 1194, 1981, 2297
Bst2BI	CACGAG	2 cut(s)	306, 1432
Bst2UI	CCWGG	3 cut(s)	87, 1239, 2501
Bst4CI	ACNGT	8 cut(s)	316, 452, 815, 1186, 1529, 2000, 2611, 2742
Bst6I	CTCTTC	2 cut(s)	674, 947
BstACI	GRCGYC	1 cut(s)	1324
BstAFI	CTTAAG	1 cut(s)	28
BstAUI	TGTACA	1 cut(s)	2154
BstC8I	GCNNGC	6 cut(s)	35, 254, 1048, 1549, 1788, 2175
BstDEI	CTNAG	5 cut(s)	535, 1029, 1665, 1840, 2189
BstDSI	CCRYGG	5 cut(s)	67, 1092, 1182, 1194, 1214
BstF5I	GGATG	4 cut(s)	250, 1960, 2308, 2650
BstHHI	GCGC	1 cut(s)	265
BstMAI	GTCTC	1 cut(s)	1610
BstMWI	GCNNNNNNNGC	7 cut(s)	262, 469, 1434, 1686, 1700, 1783, 2734
BstNI	CCWGG	3 cut(s)	87, 1239, 2501
BstNSI	RCATGY	3 cut(s)	256, 1703, 2155
BstPAI	GACNNNNGTC	1 cut(s)	1983
BstSCI	CCNGG	8 cut(s)	85, 481, 1237, 1410, 1411, 1554, 1555, 2499
BstSFI	CTRYAG	4 cut(s)	55, 431, 470, 1882
BstSLI	GKGCMC	2 cut(s)	1418, 2115
BstV1I	GCAGC	9 cut(s)	484, 736, 784, 1357, 1774, 2097, 2436, 2485, 2488
BstV2I	GAAGAC	2 cut(s)	1319, 2362
BstX2I	RGATCY	2 cut(s)	427, 529
BstXI	CCANNNNNNTGG	1 cut(s)	1093
BstYI	RGATCY	2 cut(s)	427, 529
BsuRI	GGCC	5 cut(s)	139, 1416, 1573, 1694, 1786
BtgI	CCRYGG	5 cut(s)	67, 1092, 1182, 1194, 1214
BtsCI	GGATG	4 cut(s)	250, 1960, 2308, 2650
BtsI	GCAGTG	3 cut(s)	2435, 2643, 2698
BtsIMutI	CAGTG	9 cut(s)	321, 549, 559, 1335, 2267, 2435, 2616, 2643, 2698
BveI	ACCTGC	1 cut(s)	477
Cac8I	GCNNGC	6 cut(s)	35, 254, 1048, 1549, 1788, 2175
CaiI	CAGNNNCTG	1 cut(s)	1826
CciI	TCATGA	1 cut(s)	1137
CfoI	GCGC	1 cut(s)	265
Cfr13I	GGNCC	7 cut(s)	791, 913, 1414, 1415, 1571, 1970, 1978
Cfr9I	CCCGGG	2 cut(s)	1411, 1555
CseI	GACGC	1 cut(s)	2529
Csp6I	GTAC	4 cut(s)	579, 1629, 2001, 2155
CviQI	GTAC	4 cut(s)	579, 1629, 2001, 2155
DdeI	CTNAG	5 cut(s)	535, 1029, 1665, 1840, 2189
DraI	TTTAAA	2 cut(s)	1930, 2665
Eam1104I	CTCTTC	2 cut(s)	674, 947
EarI	CTCTTC	2 cut(s)	674, 947
Ecl136II	GAGCTC	2 cut(s)	923, 2224
Eco130I	CCWWGG	8 cut(s)	134, 167, 347, 764, 1092, 1194, 1981, 2297
Eco147I	AGGCCT	1 cut(s)	139
Eco24I	GRGCYC	5 cut(s)	925, 1418, 1439, 2226, 2760
Eco32I	GATATC	2 cut(s)	1917, 1992
Eco47I	GGWCC	4 cut(s)	791, 913, 1970, 1978
Eco53kI	GAGCTC	2 cut(s)	923, 2224
Eco57I	CTGAAG	4 cut(s)	670, 837, 1208, 2072
Eco88I	CYCGRG	3 cut(s)	1411, 1555, 1568
EcoICRI	GAGCTC	2 cut(s)	923, 2224
EcoO109I	RGGNCCY	2 cut(s)	791, 913
EcoRI	GAATTC	3 cut(s)	1345, 2184, 2387
EcoRII	CCWGG	3 cut(s)	85, 1237, 2499
EcoRV	GATATC	2 cut(s)	1917, 1992
EcoT14I	CCWWGG	8 cut(s)	134, 167, 347, 764, 1092, 1194, 1981, 2297
EcoT38I	GRGCYC	5 cut(s)	925, 1418, 1439, 2226, 2760
ErhI	CCWWGG	8 cut(s)	134, 167, 347, 764, 1092, 1194, 1981, 2297
FalI	AAGNNNNNCTT	4 cut(s)	340, 372, 2354, 2386
FaqI	GGGAC	2 cut(s)	1901, 2320
FauNDI	CATATG	1 cut(s)	2079
FbaI	TGATCA	2 cut(s)	2244, 2506
Fnu4HI	GCNGC	9 cut(s)	473, 725, 773, 1371, 1763, 2086, 2450, 2474, 2477
FokI	GGATG	4 cut(s)	257, 1967, 2315, 2657
FriOI	GRGCYC	5 cut(s)	925, 1418, 1439, 2226, 2760
Fsp4HI	GCNGC	9 cut(s)	473, 725, 773, 1371, 1763, 2086, 2450, 2474, 2477
GlaI	GCGC	1 cut(s)	264
GluI	GCNGC	9 cut(s)	473, 725, 773, 1371, 1763, 2086, 2450, 2474, 2477
GsuI	CTGGAG	3 cut(s)	108, 2210, 2315
HaeIII	GGCC	5 cut(s)	139, 1416, 1573, 1694, 1786
HapII	CCGG	3 cut(s)	483, 1412, 1556
HgaI	GACGC	1 cut(s)	2529
HhaI	GCGC	1 cut(s)	265
Hin1I	GRCGYC	1 cut(s)	1324
Hin6I	GCGC	1 cut(s)	263
HinP1I	GCGC	1 cut(s)	263
HincII	GTYRAC	3 cut(s)	549, 1815, 2704
HindII	GTYRAC	3 cut(s)	549, 1815, 2704
HindIII	AAGCTT	2 cut(s)	206, 1833
HpaI	GTTAAC	1 cut(s)	1815
HpaII	CCGG	3 cut(s)	483, 1412, 1556
Hpy166II	GTNNAC	5 cut(s)	549, 1214, 1815, 2211, 2704
Hpy8I	GTNNAC	5 cut(s)	549, 1214, 1815, 2211, 2704
HpyAV	CCTTC	7 cut(s)	150, 235, 861, 1512, 1908, 2450, 2746
HpyCH4III	ACNGT	8 cut(s)	316, 452, 815, 1186, 1529, 2000, 2611, 2742
HpyCH4IV	ACGT	3 cut(s)	373, 1066, 1324
HpyF10VI	GCNNNNNNNGC	7 cut(s)	262, 469, 1434, 1686, 1700, 1783, 2734
HpyF3I	CTNAG	5 cut(s)	535, 1029, 1665, 1840, 2189
HpySE526I	ACGT	3 cut(s)	373, 1066, 1324
Hsp92I	GRCGYC	1 cut(s)	1324
HspAI	GCGC	1 cut(s)	263
Ksp22I	TGATCA	2 cut(s)	2244, 2506
KspAI	GTTAAC	1 cut(s)	1815
LguI	GCTCTTC	2 cut(s)	674, 947
LmnI	GCTCC	6 cut(s)	766, 1337, 1425, 1486, 2229, 2501
Lsp1109I	GCAGC	9 cut(s)	484, 736, 784, 1357, 1774, 2097, 2436, 2485, 2488
LweI	GCATC	6 cut(s)	311, 1377, 1437, 2186, 2577, 2686
MaeII	ACGT	3 cut(s)	373, 1066, 1324
MaeIII	GTNAC	5 cut(s)	556, 1115, 1241, 1643, 2129
MbiI	CCGCTC	1 cut(s)	2136
MfeI	CAATTG	1 cut(s)	1600
MflI	RGATCY	2 cut(s)	427, 529
MhlI	GDGCHC	9 cut(s)	925, 1037, 1418, 1439, 2115, 2226, 2438, 2498, 2760
MlyI	GAGTC	6 cut(s)	41, 122, 194, 1279, 1651, 1886
MmeI	TCCRAC	5 cut(s)	255, 1508, 2019, 2556, 2622
MroXI	GAANNNNTTC	4 cut(s)	683, 2325, 2352, 2420
MseI	TTAA	6 cut(s)	29, 927, 1814, 1929, 2382, 2664
MslI	CAYNNNNRTG	4 cut(s)	1091, 1136, 1305, 1650
MspCI	CTTAAG	1 cut(s)	28
MspI	CCGG	3 cut(s)	483, 1412, 1556
MspR9I	CCNGG	8 cut(s)	87, 483, 1239, 1412, 1413, 1556, 1557, 2501
MunI	CAATTG	1 cut(s)	1600
MvaI	CCWGG	3 cut(s)	87, 1239, 2501
MwoI	GCNNNNNNNGC	7 cut(s)	262, 469, 1434, 1686, 1700, 1783, 2734
NciI	CCSGG	5 cut(s)	483, 1412, 1413, 1556, 1557
NcoI	CCATGG	2 cut(s)	1092, 1194
NdeI	CATATG	1 cut(s)	2079
NheI	GCTAGC	1 cut(s)	2173
NlaIV	GGNNCC	3 cut(s)	662, 1099, 1416
NmuCI	GTSAC	3 cut(s)	1241, 1643, 2129
NspI	RCATGY	3 cut(s)	256, 1703, 2155
PaeI	GCATGC	1 cut(s)	256
PagI	TCATGA	1 cut(s)	1137
PceI	AGGCCT	1 cut(s)	139
PciI	ACATGT	1 cut(s)	2151
PciSI	GCTCTTC	2 cut(s)	674, 947
PdmI	GAANNNNTTC	4 cut(s)	683, 2325, 2352, 2420
PfeI	GAWTC	8 cut(s)	539, 635, 1310, 1502, 1871, 2062, 2201, 2326
PkrI	GCNGC	9 cut(s)	474, 726, 774, 1372, 1764, 2087, 2451, 2475, 2478
PleI	GAGTC	6 cut(s)	41, 122, 193, 1279, 1650, 1886
PpsI	GAGTC	6 cut(s)	41, 122, 193, 1279, 1650, 1886
PpuMI	RGGWCCY	2 cut(s)	791, 913
PscI	ACATGT	1 cut(s)	2151
PshAI	GACNNNNGTC	1 cut(s)	1983
Psp124BI	GAGCTC	2 cut(s)	925, 2226
Psp1406I	AACGTT	1 cut(s)	373
Psp5II	RGGWCCY	2 cut(s)	791, 913
Psp6I	CCWGG	3 cut(s)	85, 1237, 2499
PspGI	CCWGG	3 cut(s)	85, 1237, 2499
PspN4I	GGNNCC	3 cut(s)	662, 1099, 1416
PspOMI	GGGCCC	1 cut(s)	1414
PspPI	GGNCC	7 cut(s)	791, 913, 1414, 1415, 1571, 1970, 1978
PspPPI	RGGWCCY	2 cut(s)	791, 913
PstI	CTGCAG	2 cut(s)	435, 474
PstNI	CAGNNNCTG	1 cut(s)	1826
PsuI	RGATCY	2 cut(s)	427, 529
RsaI	GTAC	4 cut(s)	580, 1630, 2002, 2156
RsaNI	GTAC	4 cut(s)	579, 1629, 2001, 2155
RseI	CAYNNNNRTG	4 cut(s)	1091, 1136, 1305, 1650
SacI	GAGCTC	2 cut(s)	925, 2226
SapI	GCTCTTC	2 cut(s)	674, 947
SaqAI	TTAA	6 cut(s)	29, 927, 1814, 1929, 2382, 2664
SatI	GCNGC	9 cut(s)	473, 725, 773, 1371, 1763, 2086, 2450, 2474, 2477
Sau96I	GGNCC	7 cut(s)	791, 913, 1414, 1415, 1571, 1970, 1978
SchI	GAGTC	6 cut(s)	41, 122, 194, 1279, 1651, 1886
ScrFI	CCNGG	8 cut(s)	87, 483, 1239, 1412, 1413, 1556, 1557, 2501
SduI	GDGCHC	9 cut(s)	925, 1037, 1418, 1439, 2115, 2226, 2438, 2498, 2760
SfaNI	GCATC	6 cut(s)	311, 1377, 1437, 2186, 2577, 2686
SfcI	CTRYAG	4 cut(s)	55, 431, 470, 1882
SinI	GGWCC	4 cut(s)	791, 913, 1970, 1978
SmaI	CCCGGG	2 cut(s)	1413, 1557
SmiMI	CAYNNNNRTG	4 cut(s)	1091, 1136, 1305, 1650
SmlI	CTYRAG	2 cut(s)	28, 1002
SmoI	CTYRAG	2 cut(s)	28, 1002
SpeI	ACTAGT	1 cut(s)	1304
SphI	GCATGC	1 cut(s)	256
SseBI	AGGCCT	1 cut(s)	139
SsiI	CCGC	2 cut(s)	732, 2134
SspI	AATATT	1 cut(s)	16
SstI	GAGCTC	2 cut(s)	925, 2226
StuI	AGGCCT	1 cut(s)	139
StyD4I	CCNGG	8 cut(s)	85, 481, 1237, 1410, 1411, 1554, 1555, 2499
StyI	CCWWGG	8 cut(s)	134, 167, 347, 764, 1092, 1194, 1981, 2297
TaaI	ACNGT	8 cut(s)	316, 452, 815, 1186, 1529, 2000, 2611, 2742
TaiI	ACGT	3 cut(s)	376, 1069, 1327
TaqI	TCGA	5 cut(s)	126, 223, 2074, 2199, 2373
TaqII	GACCGA	1 cut(s)	514
TatI	WGTACW	3 cut(s)	1628, 2000, 2154
TfiI	GAWTC	8 cut(s)	539, 635, 1310, 1502, 1871, 2062, 2201, 2326
Tru1I	TTAA	6 cut(s)	29, 927, 1814, 1929, 2382, 2664
Tru9I	TTAA	6 cut(s)	29, 927, 1814, 1929, 2382, 2664
TscAI	CASTG	9 cut(s)	321, 549, 559, 1342, 2274, 2435, 2616, 2643, 2698
TseFI	GTSAC	3 cut(s)	1241, 1643, 2129
TseI	GCWGC	9 cut(s)	472, 724, 772, 1370, 1762, 2085, 2449, 2473, 2476
Tsp45I	GTSAC	3 cut(s)	1241, 1643, 2129
TspGWI	ACGGA	2 cut(s)	1231, 1852
TspMI	CCCGGG	2 cut(s)	1411, 1555
TspRI	CASTG	9 cut(s)	321, 549, 559, 1342, 2274, 2435, 2616, 2643, 2698
Vha464I	CTTAAG	1 cut(s)	28
VpaK11BI	GGWCC	4 cut(s)	791, 913, 1970, 1978
XapI	RAATTY	9 cut(s)	226, 736, 991, 1345, 1405, 2184, 2352, 2387, 2625
XceI	RCATGY	3 cut(s)	256, 1703, 2155
XmaI	CCCGGG	2 cut(s)	1411, 1555
XmaJI	CCTAGG	1 cut(s)	1981
XmnI	GAANNNNTTC	4 cut(s)	683, 2325, 2352, 2420
ZraI	GACGTC	1 cut(s)	1325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.