Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0004546

Physical Location & Seq

Genomic Coordinates Reverse (-)

4308828 .. 4312041

Gene Structure 3214 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g06120.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2886 bp

ATGTATTTATATATTTTTACTTTTTTTTTCAGGGAAAAAATTCGAAAAAAGGTGGTGAAAGAGAAACAACGAAACTCCACAGAATCATCAAAGACCACTGTTTCTTCTTCGCCGTGTTCATGTAGCTTCTCGTCTCTTGAACATCAAAAGGCAGCTGAGCAAGAACCATCTTTGTCCAGCCGAACCATTTCCAACGACAAACACGCTCGGGACCTATCTCTGAACCAACCAAATGTTTTGATGCACATACGCCGGCAATCTGTTGATCTGCAAGATCTTGTCAAAGACTCAACGTACAGAGAAGCCCGTGGTATTTCAGTTAAACCTGCAGCTAAAGATGGAGCTGGTCATGCATTGACGTACATTGACTCCCCGAGGCCTTCACCAATAAAATCCACCAACCCAAGGGTTTCTGGTGTTAATGAGTCATTTCAAGTTCCTGGAAAGCTTCGGGTCGCACCTTGGAGTTCAAATGAAGAGAAGGACGGTGGCACGCGTTTTGTACCAAAAGATGCTCGGAGGTTCTCTTATGATGGAAGAGAGTCACGCGATGCATCAAAATCCACCGTAAAACTCAGAGAAATCCCAAGGCTTTCTTTGGACAGCAAAGAACGTTCCACAAGGAGGGGTTGTAACCCAGAAACAAAAGCAAATTACTTCATCAAGGATCTGCAGAGAGAATATGGGAACAGCAACAAAATGCTTGACCTGCAGCATGAACCTGGAAGCGCTAAAAGACCGTCTAATGTAGTTGCAAAGTTGATGGGACTGGATCTATCAGATTCCGTGTCAACCATTGATAGTCCATTAAGGCTGATTAATACTGGCACATCTGATAGATCTGATCCCTTCTCCAGATCATCAAGAGCAACCACTGAAAACAAGCAAGATATTTTTTCCGGAATACTCCTTGTGAATGCCAAGAAAGACTTCAGCTCACCCCAGAGGAGAAGTACCGATTCAGTCATGAAGCCCACCTCGAATTCTAAGTTTCCAATAGAAACAGCTCCTTGGAGGCAGCCGCACAGAAGCAAAGGTTCTCAACGATCAGCTTTCAAGCATCAAGAAGAACCGACAAAAGCTCCAAACTCATCATCTTCAGTATATGGTGAAATGGAGAAAAGGCTAGCAGATCTTGAGTTTAAAAAATCAGGAAAGGATCTCAGAGCTCTTAAACAAATACTTGAAGCGATGCAGAAGACGAAAGGAATGACAGATACAAGAAAGATCGATCACGCCTTAAATTTTGCATCTCAAATAAGCAACGAAAGCATTTCCTCTGACAGCACAGTAAAAGCAAGCCAGAGAAATCCACAAAGCAAAATATCAGTTCCTGCCACGGCCAAGGGTTCCCTATCTCCAAAGAGTTATAAATCACCCATCGTCATAATGAAACCAGCTAAACTCATTGATAAAACCCACAGCTCTGCTTCCATGGTGGATTCCATGAATGACACGTTAGGTCTTCGGAAGCTTCGGACTAGTGATCCTGGTGGTAACAGAAAGGGATTGGTTGACAAGAATACAGCCAAAGACCCGACACCAAGGAACAATCATGTCAGAGATCCTTTCAATCGACACCTTCATTCCATTGATGATAATTCTAACGTAAGAACTTTGAAATCTGCACAAAAACCAAAGGCATCGCAAACTATGAGTGAAGAAAAAGTCATCAGCTCAAGTAGGAGTTCAAAAATCACGAGCCCGAAAATGCAACAGAGAAGACTTGGATTGGAGAAGCAGTCTCCTCCAAGCACGCCATCATTGAATTCAAGCATGACCAGAAGACAACACACTAGGCAGTCATTAGAAGCAACCACCCCAGGTAGAAAACTTGGGCATAAGACACCCAGTTTGCATCAAAGTAATGCGCAACTGAGGGAGGCTAGCACCAAGATGAGAGAGATGAGTCATCACGATGATTCCACTTCACAGCAATCTGGAAGCACCATCAGCTTGACCTCTCACACAGACACAGCCACAAGCGTTCACCAATCAGATAGGATCTCACGCACGCATTTCCAGCATAACCAAAAAATAAAGCACCCAGCAGTGGGGTTGATTGATGACAGGTCAACGGCAGAAACTAGGAAAGCTTCTTCTGAACAACCAAGCCCTGTCTCTGTTCTTGATTCGACATTCTATCGCGATGACTCACCATCTCCAGTGAAGAAGATATCAAATGCCTTCAAAGGTATAGTTCTTCTGCAACTGATCCCTTATATGTGGTATAGAATGCAAGACTCGTTTATACTAAATTTCCTCAAATTTCTTGCTGCAGACGATGAAGCACAAATTCTGGATATAGCAGGGTATGACCCAATGAACCAAGCTCTGTTATCCAACAACACAATGCCCGGTCCTGGGAATCATCGATGCATGAGCAGGACACACGAGAACCCCATCACGGGTCCCCTCTGTGACAGTACAAATCCAGACCACATGTACATTTCAGAAATATTGCTGGCATCGGGTATTCTGGAATATCTCGAATCTCCCTGGACAACCACTGAGCTCCACACATCAGACCACCTGATCGACCCTACTTTGTTCCTTGCACTGGAAGATATCAGAGCAAATACAATACCTTCTGATCTCCAGCCCAAACCTGATGAGAAACTTCAAAGAAAACTAGTATTTGAGGTTGTTAATGAATTCCTTGTTCAAAAACTAGTGGTGGAAGATTCTTTGAAGCAGTGGTTCCCACCACACAAGCTGGCCGATGGGAAACCAAGAAGTCAGCAGCTTCTGAAAGAAATGTGTTCAGAGGTTGATCAGCTACAAAGAAAGAACTTGAATGGCAGCCTGGATGACGAGGATGAAGGTTTGAGAAACATCTTGTTGGAAGATTTCACGGATCAAGCAAAGAATTGGACAGACGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0008017 GO:0008092 GO:0008150 GO:0015631 GO:0022603 GO:0022604 GO:0040008 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051510 GO:0051513 GO:0065007

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

962

Amino Acids

107.77

Weight (kDa)

9.5

Isoelectric Point (pI)

55.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004546)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46710 FvH4_6g46710 FvH4_6g46710 FvH4_6g46710
malus_domestica	MD09G1068400.v1.1 MD17G1061300.v1.1
prunus_persica	Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1 Prupe.3G252400_v2.0.a1
pyrus_communis	pycom12433g00110 pycom12433g00120 pycom17g06120
rosa_chinensis	RchiOBHm_Chr2g0165601
rosa_laevigata	RLG00000021542
rosa_multiflora	Rmu_co8268985.1_g000001 Rmu_co8395029.1_g000001 Rmu_sc0005425.1_g000021 Rmu_sc0035818.1_g000001
rosa_roxburghii	Rroxscaffold_2G00085700
rosa_rugosa	Rorug02G0516300 Rorug02G0516400 Rorug02G0516400 Rorug02G0516400
rosa_samantha	Rh2AG582500 Rh2BG594600 Rh2CG564500 Rh2DG604500
rosa_wichuraiana	Rw0G016060 Rw2G048590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1371
Acc16I	TGCGCA	1 cut(s)	1872
Acc36I	ACCTGC	2 cut(s)	334, 717
AccII	CGCG	3 cut(s)	496, 549, 2148
AccIII	TCCGGA	1 cut(s)	899
AciI	CCGC	1 cut(s)	1022
AclI	AACGTT	1 cut(s)	613
AclWI	GGATC	9 cut(s)	675, 780, 839, 1167, 1481, 1559, 2012, 2209, 2865
AcoI	YGGCCR	2 cut(s)	1341, 2718
AcsI	RAATTY	8 cut(s)	39, 982, 1243, 1768, 2257, 2267, 2295, 2654
AcuI	CTGAAG	2 cut(s)	916, 1083
AfaI	GTAC	6 cut(s)	296, 362, 504, 955, 2428, 2447
AfeI	AGCGCT	1 cut(s)	730
AfiI	CCNNNNNNNGG	9 cut(s)	405, 624, 2053, 2054, 2363, 2364, 2407, 2408, 2560
AflIII	ACRYGT	3 cut(s)	494, 1455, 2442
AhlI	ACTAGT	3 cut(s)	1481, 2632, 2671
AjnI	CCWGG	7 cut(s)	439, 721, 1489, 1822, 2362, 2498, 2805
AjuI	GAANNNNNNNTTGG	2 cut(s)	914, 946
Alw21I	GWGCWC	2 cut(s)	1171, 2517
Alw26I	GTCTC	3 cut(s)	138, 1749, 2125
AlwI	GGATC	9 cut(s)	675, 780, 839, 1167, 1481, 1559, 2012, 2209, 2865
AlwNI	CAGNNNCTG	2 cut(s)	1334, 2749
Ama87I	CYCGRG	2 cut(s)	207, 373
Aor13HI	TCCGGA	1 cut(s)	899
Aor51HI	AGCGCT	1 cut(s)	730
AoxI	GGCC	3 cut(s)	377, 1341, 2718
ApeKI	GCWGC	7 cut(s)	152, 329, 712, 1018, 2276, 2743, 2802
ApoI	RAATTY	8 cut(s)	39, 982, 1243, 1768, 2257, 2267, 2295, 2654
ArsI	GACNNNNNNTTYG	2 cut(s)	1837, 1869
AseI	ATTAAT	1 cut(s)	819
Asp700I	GAANNNNTTC	3 cut(s)	39, 187, 929
AspLEI	GCGC	2 cut(s)	731, 1873
AspS9I	GGNCC	3 cut(s)	211, 2360, 2411
AsuC2I	CCSGG	1 cut(s)	2358
AsuHPI	GGTGA	7 cut(s)	67, 375, 930, 1121, 1368, 1982, 2148
AsuII	TTCGAA	1 cut(s)	43
AsuNHI	GCTAGC	2 cut(s)	1126, 1886
AvaI	CYCGRG	2 cut(s)	207, 373
AvaII	GGWCC	3 cut(s)	211, 2360, 2411
BanII	GRGCYC	3 cut(s)	1171, 1706, 2517
BauI	CACGAG	2 cut(s)	1699, 2393
BbsI	GAAGAC	4 cut(s)	1205, 1457, 1729, 1792
Bbv12I	GWGCWC	2 cut(s)	1171, 2517
BbvI	GCAGC	7 cut(s)	164, 341, 724, 1030, 2263, 2755, 2814
BceAI	ACGGC	3 cut(s)	97, 1356, 2094
BciT130I	CCWGG	7 cut(s)	441, 723, 1491, 1824, 2364, 2500, 2807
BclI	TGATCA	1 cut(s)	2773
BcnI	CCSGG	1 cut(s)	2358
BcoDI	GTCTC	3 cut(s)	138, 1749, 2125
BcuI	ACTAGT	3 cut(s)	1481, 2632, 2671
BfaI	CTAG	7 cut(s)	1127, 1482, 1797, 1887, 2088, 2633, 2672
BfmI	CTRYAG	4 cut(s)	327, 671, 710, 2277
BfoI	RGCGCY	1 cut(s)	732
BfuAI	ACCTGC	2 cut(s)	334, 717
BglII	AGATCT	3 cut(s)	274, 839, 1132
BisI	GCNGC	8 cut(s)	153, 330, 713, 1019, 1022, 2277, 2744, 2803
BlpI	GCTNAGC	1 cut(s)	156
BlsI	GCNGC	8 cut(s)	154, 331, 714, 1020, 1023, 2278, 2745, 2804
Bme1390I	CCNGG	8 cut(s)	441, 723, 1491, 1824, 2358, 2364, 2500, 2807
Bme18I	GGWCC	3 cut(s)	211, 2360, 2411
BmeT110I	CYCGRG	2 cut(s)	207, 373
BmgT120I	GGNCC	3 cut(s)	211, 2360, 2411
BmiI	GGNNCC	5 cut(s)	212, 1351, 2412, 2413, 2702
BmrFI	CCNGG	8 cut(s)	441, 723, 1491, 1824, 2358, 2364, 2500, 2807
BmrI	ACTGGG	1 cut(s)	1845
BmtI	GCTAGC	2 cut(s)	1130, 1890
BmuI	ACTGGG	1 cut(s)	1845
BpiI	GAAGAC	4 cut(s)	1205, 1457, 1729, 1792
BpmI	CTGGAG	3 cut(s)	838, 2148, 2582
Bpu1102I	GCTNAGC	1 cut(s)	156
Bpu14I	TTCGAA	1 cut(s)	43
BpuEI	CTTGAG	2 cut(s)	1157, 1663
BpuMI	CCSGG	1 cut(s)	2358
Bsa29I	ATCGAT	2 cut(s)	1230, 2374
BsaWI	WCCGGW	1 cut(s)	899
BsaXI	ACNNNNNCTCC	8 cut(s)	353, 383, 616, 646, 1066, 1096, 1727, 1757
Bsc4I	CCNNNNNNNGG	9 cut(s)	405, 624, 2053, 2054, 2363, 2364, 2407, 2408, 2560
Bse118I	RCCGGY	1 cut(s)	252
Bse1I	ACTGG	5 cut(s)	774, 829, 1851, 2165, 2565
BseAI	TCCGGA	1 cut(s)	899
BseBI	CCWGG	7 cut(s)	441, 723, 1491, 1824, 2364, 2500, 2807
BseCI	ATCGAT	2 cut(s)	1230, 2374
BseGI	GGATG	2 cut(s)	2815, 2824
BseLI	CCNNNNNNNGG	9 cut(s)	405, 624, 2053, 2054, 2363, 2364, 2407, 2408, 2560
BseMII	CTCAG	5 cut(s)	147, 589, 1177, 1868, 2502
BseNI	ACTGG	5 cut(s)	774, 829, 1851, 2165, 2565
BseRI	GAGGAG	2 cut(s)	961, 1737
BseXI	GCAGC	7 cut(s)	164, 341, 724, 1030, 2263, 2755, 2814
BseYI	CCCAGC	1 cut(s)	2047
BsgI	GTGCAG	1 cut(s)	1611
Bsh1236I	CGCG	3 cut(s)	496, 549, 2148
BshFI	GGCC	3 cut(s)	379, 1343, 2720
BshVI	ATCGAT	2 cut(s)	1230, 2374
BsiHKAI	GWGCWC	2 cut(s)	1171, 2517
BsiHKCI	CYCGRG	2 cut(s)	207, 373
BsiSI	CCGG	3 cut(s)	253, 900, 2358
BslFI	GGGAC	3 cut(s)	224, 780, 2397
BslI	CCNNNNNNNGG	9 cut(s)	405, 624, 2053, 2054, 2363, 2364, 2407, 2408, 2560
BsmAI	GTCTC	3 cut(s)	138, 1749, 2125
BsmBI	CGTCTC	1 cut(s)	138
BsmFI	GGGAC	3 cut(s)	224, 780, 2397
BsmI	GAATGC	2 cut(s)	922, 2241
BsnI	GGCC	3 cut(s)	379, 1343, 2720
BsoBI	CYCGRG	2 cut(s)	207, 373
Bsp119I	TTCGAA	1 cut(s)	43
Bsp1286I	GDGCHC	3 cut(s)	1171, 1706, 2517
Bsp13I	TCCGGA	1 cut(s)	899
Bsp1407I	TGTACA	1 cut(s)	2445
Bsp1720I	GCTNAGC	1 cut(s)	156
Bsp19I	CCATGG	1 cut(s)	1434
Bsp68I	TCGCGA	1 cut(s)	2148
BspACI	CCGC	1 cut(s)	1022
BspANI	GGCC	3 cut(s)	379, 1343, 2720
BspCNI	CTCAG	5 cut(s)	148, 588, 1176, 1869, 2503
BspDI	ATCGAT	2 cut(s)	1230, 2374
BspEI	TCCGGA	1 cut(s)	899
BspFNI	CGCG	3 cut(s)	496, 549, 2148
BspHI	TCATGA	1 cut(s)	966
BspLI	GGNNCC	5 cut(s)	212, 1351, 2412, 2413, 2702
BspMAI	CTGCAG	4 cut(s)	331, 675, 714, 2281
BspMI	ACCTGC	2 cut(s)	334, 717
BspOI	GCTAGC	2 cut(s)	1130, 1890
BspPI	GGATC	9 cut(s)	675, 780, 839, 1167, 1481, 1559, 2012, 2209, 2865
BspT104I	TTCGAA	1 cut(s)	43
BsrFI	RCCGGY	1 cut(s)	252
BsrGI	TGTACA	1 cut(s)	2445
BsrI	ACTGG	5 cut(s)	774, 829, 1851, 2165, 2565
BssAI	RCCGGY	1 cut(s)	252
BssSI	CACGAG	2 cut(s)	1699, 2393
BssT1I	CCWWGG	7 cut(s)	404, 461, 587, 1010, 1344, 1434, 1544
Bst2BI	CACGAG	2 cut(s)	1699, 2393
Bst2UI	CCWGG	7 cut(s)	441, 723, 1491, 1824, 2364, 2500, 2807
Bst4CI	ACNGT	6 cut(s)	100, 488, 568, 741, 1291, 2426
Bst6I	CTCTTC	2 cut(s)	471, 532
BstAUI	TGTACA	1 cut(s)	2445
BstBI	TTCGAA	1 cut(s)	43
BstC8I	GCNNGC	9 cut(s)	254, 494, 1128, 1300, 1757, 1888, 2015, 2466, 2718
BstDEI	CTNAG	6 cut(s)	156, 575, 987, 1163, 1877, 2511
BstDSI	CCRYGG	3 cut(s)	307, 1338, 1434
BstF5I	GGATG	2 cut(s)	2815, 2824
BstFNI	CGCG	3 cut(s)	496, 549, 2148
BstH2I	RGCGCY	1 cut(s)	732
BstHHI	GCGC	2 cut(s)	731, 1873
BstMAI	GTCTC	3 cut(s)	138, 1749, 2125
BstMWI	GCNNNNNNNGC	5 cut(s)	350, 709, 1269, 1953, 2023
BstNI	CCWGG	7 cut(s)	441, 723, 1491, 1824, 2364, 2500, 2807
BstNSI	RCATGY	1 cut(s)	2446
BstSCI	CCNGG	8 cut(s)	439, 721, 1489, 1822, 2356, 2362, 2498, 2805
BstSFI	CTRYAG	4 cut(s)	327, 671, 710, 2277
BstUI	CGCG	3 cut(s)	496, 549, 2148
BstV1I	GCAGC	7 cut(s)	164, 341, 724, 1030, 2263, 2755, 2814
BstV2I	GAAGAC	4 cut(s)	1205, 1457, 1729, 1792
BstX2I	RGATCY	8 cut(s)	274, 667, 772, 839, 1132, 1159, 1564, 2004
BstYI	RGATCY	8 cut(s)	274, 667, 772, 839, 1132, 1159, 1564, 2004
Bsu15I	ATCGAT	2 cut(s)	1230, 2374
BsuRI	GGCC	3 cut(s)	379, 1343, 2720
BsuTUI	ATCGAT	2 cut(s)	1230, 2374
BtgI	CCRYGG	3 cut(s)	307, 1338, 1434
BtgZI	GCGATG	4 cut(s)	564, 1205, 1629, 2163
BtsCI	GGATG	2 cut(s)	2815, 2824
BtsI	GCAGTG	2 cut(s)	2058, 2702
BtsIMutI	CAGTG	7 cut(s)	96, 873, 2058, 2172, 2508, 2558, 2702
BtuMI	TCGCGA	1 cut(s)	2148
BveI	ACCTGC	2 cut(s)	334, 717
Cac8I	GCNNGC	9 cut(s)	254, 494, 1128, 1300, 1757, 1888, 2015, 2466, 2718
CaiI	CAGNNNCTG	2 cut(s)	1334, 2749
CciI	TCATGA	1 cut(s)	966
CfoI	GCGC	2 cut(s)	731, 1873
Cfr10I	RCCGGY	1 cut(s)	252
Cfr13I	GGNCC	3 cut(s)	211, 2360, 2411
ClaI	ATCGAT	2 cut(s)	1230, 2374
Csp6I	GTAC	6 cut(s)	295, 361, 503, 954, 2427, 2446
CviQI	GTAC	6 cut(s)	295, 361, 503, 954, 2427, 2446
DdeI	CTNAG	6 cut(s)	156, 575, 987, 1163, 1877, 2511
DraI	TTTAAA	1 cut(s)	1144
EaeI	YGGCCR	2 cut(s)	1341, 2718
Eam1104I	CTCTTC	2 cut(s)	471, 532
EarI	CTCTTC	2 cut(s)	471, 532
Ecl136II	GAGCTC	2 cut(s)	1169, 2515
Eco130I	CCWWGG	7 cut(s)	404, 461, 587, 1010, 1344, 1434, 1544
Eco147I	AGGCCT	1 cut(s)	379
Eco24I	GRGCYC	3 cut(s)	1171, 1706, 2517
Eco32I	GATATC	2 cut(s)	2178, 2569
Eco47I	GGWCC	3 cut(s)	211, 2360, 2411
Eco47III	AGCGCT	1 cut(s)	730
Eco53kI	GAGCTC	2 cut(s)	1169, 2515
Eco57I	CTGAAG	2 cut(s)	916, 1083
Eco88I	CYCGRG	2 cut(s)	207, 373
EcoICRI	GAGCTC	2 cut(s)	1169, 2515
EcoO109I	RGGNCCY	2 cut(s)	211, 2411
EcoRI	GAATTC	3 cut(s)	982, 1768, 2654
EcoRII	CCWGG	7 cut(s)	439, 721, 1489, 1822, 2362, 2498, 2805
EcoRV	GATATC	2 cut(s)	2178, 2569
EcoT14I	CCWWGG	7 cut(s)	404, 461, 587, 1010, 1344, 1434, 1544
EcoT22I	ATGCAT	3 cut(s)	355, 556, 2381
EcoT38I	GRGCYC	3 cut(s)	1171, 1706, 2517
ErhI	CCWWGG	7 cut(s)	404, 461, 587, 1010, 1344, 1434, 1544
Esp3I	CGTCTC	1 cut(s)	138
FalI	AAGNNNNNCTT	4 cut(s)	580, 612, 914, 946
FaqI	GGGAC	3 cut(s)	224, 780, 2397
FbaI	TGATCA	1 cut(s)	2773
Fnu4HI	GCNGC	8 cut(s)	153, 330, 713, 1019, 1022, 2277, 2744, 2803
FokI	GGATG	2 cut(s)	2822, 2831
FriOI	GRGCYC	3 cut(s)	1171, 1706, 2517
Fsp4HI	GCNGC	8 cut(s)	153, 330, 713, 1019, 1022, 2277, 2744, 2803
FspBI	CTAG	7 cut(s)	1127, 1482, 1797, 1887, 2088, 2633, 2672
FspI	TGCGCA	1 cut(s)	1872
GlaI	GCGC	2 cut(s)	730, 1872
GluI	GCNGC	8 cut(s)	153, 330, 713, 1019, 1022, 2277, 2744, 2803
GsaI	CCCAGC	1 cut(s)	2051
GsuI	CTGGAG	3 cut(s)	838, 2148, 2582
HaeII	RGCGCY	1 cut(s)	732
HaeIII	GGCC	3 cut(s)	379, 1343, 2720
HapII	CCGG	3 cut(s)	253, 900, 2358
HhaI	GCGC	2 cut(s)	731, 1873
Hin6I	GCGC	2 cut(s)	729, 1871
HinP1I	GCGC	2 cut(s)	729, 1871
HincII	GTYRAC	3 cut(s)	792, 1516, 2076
HindII	GTYRAC	3 cut(s)	792, 1516, 2076
HindIII	AAGCTT	3 cut(s)	446, 1472, 2094
HpaII	CCGG	3 cut(s)	253, 900, 2358
HphI	GGTGA	7 cut(s)	67, 375, 930, 1121, 1368, 1982, 2148
Hpy166II	GTNNAC	4 cut(s)	792, 1516, 1990, 2076
Hpy8I	GTNNAC	4 cut(s)	792, 1516, 1990, 2076
HpyAV	CCTTC	7 cut(s)	390, 475, 859, 1592, 2197, 2598, 2816
HpyCH4III	ACNGT	6 cut(s)	100, 488, 568, 741, 1291, 2426
HpyCH4IV	ACGT	5 cut(s)	293, 359, 613, 1457, 1608
HpyF10VI	GCNNNNNNNGC	5 cut(s)	350, 709, 1269, 1953, 2023
HpyF3I	CTNAG	6 cut(s)	156, 575, 987, 1163, 1877, 2511
HpySE526I	ACGT	5 cut(s)	293, 359, 613, 1457, 1608
HspAI	GCGC	2 cut(s)	729, 1871
KflI	GGGWCCC	1 cut(s)	2411
Kpn2I	TCCGGA	1 cut(s)	899
KroI	GCCGGC	1 cut(s)	252
KroNI	GCCGGC	1 cut(s)	254
Ksp22I	TGATCA	1 cut(s)	2773
LmnI	GCTCC	4 cut(s)	341, 1012, 1087, 2520
Lsp1109I	GCAGC	7 cut(s)	164, 341, 724, 1030, 2263, 2755, 2814
MaeI	CTAG	7 cut(s)	1127, 1482, 1797, 1887, 2088, 2633, 2672
MaeII	ACGT	5 cut(s)	293, 359, 613, 1457, 1608
MaeIII	GTNAC	4 cut(s)	543, 632, 1496, 2420
MflI	RGATCY	8 cut(s)	274, 667, 772, 839, 1132, 1159, 1564, 2004
MhlI	GDGCHC	3 cut(s)	1171, 1706, 2517
MluI	ACGCGT	1 cut(s)	494
MlyI	GAGTC	7 cut(s)	281, 362, 434, 551, 1918, 2147, 2237
MmeI	TCCRAC	3 cut(s)	216, 2367, 2823
Mph1103I	ATGCAT	3 cut(s)	355, 556, 2381
MroI	TCCGGA	1 cut(s)	899
MroNI	GCCGGC	1 cut(s)	252
MroXI	GAANNNNTTC	3 cut(s)	39, 187, 929
MseI	TTAA	8 cut(s)	321, 420, 809, 819, 1143, 1173, 1241, 2649
MslI	CAYNNNNRTG	2 cut(s)	1895, 1917
MspA1I	CMGCKG	1 cut(s)	155
MspI	CCGG	3 cut(s)	253, 900, 2358
MspR9I	CCNGG	8 cut(s)	441, 723, 1491, 1824, 2358, 2364, 2500, 2807
Mva1269I	GAATGC	2 cut(s)	922, 2241
MvaI	CCWGG	7 cut(s)	441, 723, 1491, 1824, 2364, 2500, 2807
MvnI	CGCG	3 cut(s)	496, 549, 2148
MwoI	GCNNNNNNNGC	5 cut(s)	350, 709, 1269, 1953, 2023
NaeI	GCCGGC	1 cut(s)	254
NciI	CCSGG	1 cut(s)	2358
NcoI	CCATGG	1 cut(s)	1434
NgoMIV	GCCGGC	1 cut(s)	252
NheI	GCTAGC	2 cut(s)	1126, 1886
NlaIV	GGNNCC	5 cut(s)	212, 1351, 2412, 2413, 2702
NmuCI	GTSAC	2 cut(s)	543, 2420
NruI	TCGCGA	1 cut(s)	2148
NsbI	TGCGCA	1 cut(s)	1872
NsiI	ATGCAT	3 cut(s)	355, 556, 2381
NspI	RCATGY	1 cut(s)	2446
NspV	TTCGAA	1 cut(s)	43
PagI	TCATGA	1 cut(s)	966
PceI	AGGCCT	1 cut(s)	379
PciI	ACATGT	1 cut(s)	2442
PctI	GAATGC	2 cut(s)	922, 2241
PdiI	GCCGGC	1 cut(s)	254
PdmI	GAANNNNTTC	3 cut(s)	39, 187, 929
PfeI	GAWTC	9 cut(s)	83, 782, 959, 1442, 1922, 2132, 2368, 2492, 2684
PfoI	TCCNGGA	1 cut(s)	439
PkrI	GCNGC	8 cut(s)	154, 331, 714, 1020, 1023, 2278, 2745, 2804
PleI	GAGTC	7 cut(s)	281, 362, 433, 550, 1917, 2147, 2237
PpsI	GAGTC	7 cut(s)	281, 362, 433, 550, 1917, 2147, 2237
PpuMI	RGGWCCY	2 cut(s)	211, 2411
PscI	ACATGT	1 cut(s)	2442
PshBI	ATTAAT	1 cut(s)	819
PsiI	TTATAA	1 cut(s)	1371
Psp124BI	GAGCTC	2 cut(s)	1171, 2517
Psp1406I	AACGTT	1 cut(s)	613
Psp5II	RGGWCCY	2 cut(s)	211, 2411
Psp6I	CCWGG	7 cut(s)	439, 721, 1489, 1822, 2362, 2498, 2805
PspFI	CCCAGC	1 cut(s)	2047
PspGI	CCWGG	7 cut(s)	439, 721, 1489, 1822, 2362, 2498, 2805
PspN4I	GGNNCC	5 cut(s)	212, 1351, 2412, 2413, 2702
PspPI	GGNCC	3 cut(s)	211, 2360, 2411
PspPPI	RGGWCCY	2 cut(s)	211, 2411
PstI	CTGCAG	4 cut(s)	331, 675, 714, 2281
PstNI	CAGNNNCTG	2 cut(s)	1334, 2749
PsuI	RGATCY	8 cut(s)	274, 667, 772, 839, 1132, 1159, 1564, 2004
PvuII	CAGCTG	1 cut(s)	155
RruI	TCGCGA	1 cut(s)	2148
RsaI	GTAC	6 cut(s)	296, 362, 504, 955, 2428, 2447
RsaNI	GTAC	6 cut(s)	295, 361, 503, 954, 2427, 2446
RseI	CAYNNNNRTG	2 cut(s)	1895, 1917
SacI	GAGCTC	2 cut(s)	1171, 2517
SaqAI	TTAA	8 cut(s)	321, 420, 809, 819, 1143, 1173, 1241, 2649
SatI	GCNGC	8 cut(s)	153, 330, 713, 1019, 1022, 2277, 2744, 2803
Sau96I	GGNCC	3 cut(s)	211, 2360, 2411
SchI	GAGTC	7 cut(s)	281, 362, 434, 551, 1918, 2147, 2237
ScrFI	CCNGG	8 cut(s)	441, 723, 1491, 1824, 2358, 2364, 2500, 2807
SduI	GDGCHC	3 cut(s)	1171, 1706, 2517
SfcI	CTRYAG	4 cut(s)	327, 671, 710, 2277
SfuI	TTCGAA	1 cut(s)	43
SinI	GGWCC	3 cut(s)	211, 2360, 2411
SmiMI	CAYNNNNRTG	2 cut(s)	1895, 1917
SmlI	CTYRAG	2 cut(s)	1136, 1678
SmoI	CTYRAG	2 cut(s)	1136, 1678
SpeI	ACTAGT	3 cut(s)	1481, 2632, 2671
SseBI	AGGCCT	1 cut(s)	379
SsiI	CCGC	1 cut(s)	1022
SspI	AATATT	1 cut(s)	2460
SspMI	CTAG	7 cut(s)	1127, 1482, 1797, 1887, 2088, 2633, 2672
SstI	GAGCTC	2 cut(s)	1171, 2517
StuI	AGGCCT	1 cut(s)	379
StyD4I	CCNGG	8 cut(s)	439, 721, 1489, 1822, 2356, 2362, 2498, 2805
StyI	CCWWGG	7 cut(s)	404, 461, 587, 1010, 1344, 1434, 1544
TaaI	ACNGT	6 cut(s)	100, 488, 568, 741, 1291, 2426
TaiI	ACGT	5 cut(s)	296, 362, 616, 1460, 1611
TaqI	TCGA	8 cut(s)	43, 980, 1230, 1576, 2135, 2374, 2490, 2538
TatI	WGTACW	2 cut(s)	2426, 2445
TauI	GCSGC	1 cut(s)	1024
TfiI	GAWTC	9 cut(s)	83, 782, 959, 1442, 1922, 2132, 2368, 2492, 2684
Tru1I	TTAA	8 cut(s)	321, 420, 809, 819, 1143, 1173, 1241, 2649
Tru9I	TTAA	8 cut(s)	321, 420, 809, 819, 1143, 1173, 1241, 2649
TscAI	CASTG	7 cut(s)	103, 880, 2058, 2172, 2515, 2565, 2702
TseFI	GTSAC	2 cut(s)	543, 2420
TseI	GCWGC	7 cut(s)	152, 329, 712, 1018, 2276, 2743, 2802
Tsp45I	GTSAC	2 cut(s)	543, 2420
TspGWI	ACGGA	2 cut(s)	775, 2870
TspRI	CASTG	7 cut(s)	103, 880, 2058, 2172, 2515, 2565, 2702
VpaK11BI	GGWCC	3 cut(s)	211, 2360, 2411
VspI	ATTAAT	1 cut(s)	819
XapI	RAATTY	8 cut(s)	39, 982, 1243, 1768, 2257, 2267, 2295, 2654
XceI	RCATGY	1 cut(s)	2446
XmnI	GAANNNNTTC	3 cut(s)	39, 187, 929
XspI	CTAG	7 cut(s)	1127, 1482, 1797, 1887, 2088, 2633, 2672
Zsp2I	ATGCAT	3 cut(s)	355, 556, 2381

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.