Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0002410

Physical Location & Seq

Genomic Coordinates Reverse (-)

5785929 .. 5793660

Gene Structure 7732 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g05490.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGGGGAATACTTGCGTTGGACCCAGCATTTCCAAGAATGGCTTCTTCCAATCAGTTTCTGCTGCAATGTGGCGAACCCCTTTGCCAGATGACAACTCTGTTCATACAGTCAATGAGCCCAGGGAACCCGAGTCGCCTCTTCCCGTGCAAGACAAGCCGCCCCAACAGGTCACCATACCAAAACCTGAGACGACCGAGCCGAAACAACCCTCCAAACCCTCCAAACCCCCCCAGATGAAGAGGGTCCCTAGTGCAGGGCTTCGTGCTGGTTCAGTCTTGCAAACAAGGACCGGCAAATTGAAGGAGTTTTATAGTTTGGGGAGGAGATTGGGACAGGGGCAGTTTGGAGTAACAACTCTGTGTGTCGAGAAGGCCACAGGGAAAGAGTATGCGTGCAAGTCGATTGCAAAAAGGAAGTTGATAACTGAGGATGATGTGGAGGATGTCAGGAGGGAAATTCAGATAATGCATCATCTGGCAGGCCACCCTAATGTTATATCCATAAAGGGTGCTTATGAGGATGCTGTTGCAGTTCATGTTGTTATGGAATTATGTGCAGGCGGTGAGCTCTTCGATAGGATAATCCAGCGTGGCCATTATACAGAAAGAAAGGCAGCTGAGCTCACTAGGACTATAGTTGGAGTTGTAGAAGCTTGCCATTCCTTAGGAGTCATGCATCGAGACCTTAAGCCCGAGAATTTTCTCTTTGTCAGTCAGGAGGAGGATGCACTTCTTAAAACTATTGATTTTGGATTATCCATTTTCTTGAAGCCAGGAGAAAAGTTTACTGATGTGGTTGGAAGCCCATATTATGTCGCTCCAGAAGTCTTACGAAAGCGTTATGGTCCCGAAGCAGATGTTTGGAGCGCTGGAGTGATTCTTTATATTTTGTTAAGTGGGGTGCCTCCATTTTGGGCTGAAACGGAGCAAGGAATATTTGAACAGGTCTTGCATGGTGAGCTAGACTTTTCATCAGATCCCTGGCCTAGTATCTCTGACGGTGCCAAAGATTTAGTTAGGAGAATGCTTGTCCGAGACCCTAAAAAACGGCTGACTGCGCATGAAGTTTTGTGCCACCCCTGGGTGCAAGTTGATGGTGTGGCTCCTGATAAGGCACTTGATTCCGCAGTTCTAAGTCGGTTAAAGCAATTTTCAGCTATGAACAAGCTGAAGAAAATGGCTCTTAGGGTTATTGCTGAGAGCTTATCTGAAGAAGAAATAGCCGGCCTGAAAGAAATGTTCAAGATGATAGACACTGATGGCAGTGGCCAGATTACTTTTGAAGAACTTAAGGCGGGACTGAAAAAATTTGGAGCTACTCTCAAGGAGTCAGAAATTTATGATCTGATGCAGGCAGCAGATGTAGATAATAGCGGAACTATTGATTATGGGGAGTTTGTTGCTGCCACATTGCATTTAAACAAAATTGAGAGAGAAGATCATCTGTTTGCAGCTTTCTCCTACTTTGATAAGGATGGAAGTGGCTACATTACTCAAGATGAGCTTCAACTAGCTTGTGAGGAGTTTGGTGTAGAGGATGTTCGCCTCGAAGAAATGATAAGTGAAGTCGATCAGGATAATGATGGACGCATAGATTACAATGAGTTTGTGGCCATGATGCAAAAAGGAAATTTTGTTGGCCCGGGCAAGAAGGGCCTGCAAAGTAGTTTCAGTATTAAATTCAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005509 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0031090 GO:0031903 GO:0031984 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042175 GO:0042221 GO:0042579 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0098588 GO:0098805 GO:0098827 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_6 Pkinase

Protein Analysis

563

Amino Acids

62.54

Weight (kDa)

5.44

Isoelectric Point (pI)

43.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	104 - 362	2.9e-77	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	106 - 356	2.3e-24	Protein tyrosine and serine/threonine kinase
EF-hand_1	PF00036	410 - 437	4.2e-09	EF hand domain
EF-hand_7	PF13499	410 - 469	5e-13	EF-hand domain pair
EF-hand_6	PF13405	410 - 438	1.1e-07	EF-hand domain
EF-hand_5	PF13202	410 - 432	1e-06	EF hand
EF-hand_8	PF13833	422 - 470	9.2e-08	EF-hand domain pair
EF-hand_7	PF13499	479 - 541	9e-15	EF-hand domain pair
EF-hand_6	PF13405	483 - 510	3.6e-06	EF-hand domain
EF-hand_1	PF00036	516 - 542	1.9e-08	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10660 AT3G10660 AT5G04870
fragaria_vesca	FvH4_6g20840 FvH4_6g20840 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490
malus_domestica	MD02G1257300.v1.1 MD07G1063300.v1.1 MD12G1044400.v1.1 MD14G1043300.v1.1
prunus_persica	Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.7G090800_v2.0.a1 Prupe.7G090800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0332341 RchiOBHm_Chr3g0464211 RchiOBHm_Chr3g0477181
rosa_laevigata	RLG00000023739 RLG00000029678
rosa_multiflora	Rmu_sc0000932.1_g000001 Rmu_sc0003422.1_g000006
rosa_roxburghii	Rroxscaffold_4G00318280 Rroxscaffold_6G00404350 Rroxscaffold_6G00404850
rosa_rugosa	Rorug01G0100000 Rorug03G0158600
rosa_samantha	Rh1CG118000 Rh1DG129100 Rh3AG208900 Rh3CG236600 Rh3DG235400
rosa_wichuraiana	Rw1G010080 Rw3G019050 Rw3G019440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1059
AccB1I	GGYRCC	2 cut(s)	901, 1001
AciI	CCGC	5 cut(s)	158, 561, 1125, 1295, 1374
AclWI	GGATC	1 cut(s)	971
AcoI	YGGCCR	3 cut(s)	592, 1267, 1611
AcsI	RAATTY	6 cut(s)	456, 697, 1307, 1335, 1630, 1679
AcuI	CTGAAG	2 cut(s)	1190, 1230
AfeI	AGCGCT	1 cut(s)	868
AfiI	CCNNNNNNNGG	2 cut(s)	254, 1081
AflII	CTTAAG	2 cut(s)	686, 1289
AgsI	TTSAA	6 cut(s)	301, 769, 941, 1243, 1283, 1508
AjnI	CCWGG	4 cut(s)	119, 772, 980, 1079
AjuI	GAANNNNNNNTTGG	2 cut(s)	26, 58
Alw21I	GWGCWC	2 cut(s)	570, 624
Alw26I	GTCTC	3 cut(s)	182, 675, 1029
AlwI	GGATC	1 cut(s)	971
AlwNI	CAGNNNCTG	1 cut(s)	59
Ama87I	CYCGRG	3 cut(s)	128, 692, 1642
Aor51HI	AGCGCT	1 cut(s)	868
AoxI	GGCC	9 cut(s)	372, 481, 592, 983, 1225, 1267, 1611, 1639, 1654
ApeKI	GCWGC	5 cut(s)	62, 614, 1355, 1403, 1451
ApoI	RAATTY	6 cut(s)	456, 697, 1307, 1335, 1630, 1679
Asp700I	GAANNNNTTC	1 cut(s)	41
AspLEI	GCGC	2 cut(s)	869, 1060
AspS9I	GGNCC	6 cut(s)	20, 244, 288, 845, 1640, 1654
AsuC2I	CCSGG	2 cut(s)	1643, 1644
AsuHPI	GGTGA	3 cut(s)	163, 575, 968
AvaI	CYCGRG	3 cut(s)	128, 692, 1642
AvaII	GGWCC	4 cut(s)	20, 244, 288, 845
AxyI	CCTNAGG	1 cut(s)	664
BalI	TGGCCA	3 cut(s)	594, 1269, 1613
BanI	GGYRCC	2 cut(s)	901, 1001
BanII	GRGCYC	3 cut(s)	120, 570, 624
Bbv12I	GWGCWC	2 cut(s)	570, 624
BbvI	GCAGC	5 cut(s)	49, 626, 1367, 1390, 1463
BccI	CCATC	4 cut(s)	1088, 1253, 1469, 1577
BceAI	ACGGC	1 cut(s)	1064
BciT130I	CCWGG	4 cut(s)	121, 774, 982, 1081
BcnI	CCSGG	2 cut(s)	1643, 1644
BcoDI	GTCTC	3 cut(s)	182, 675, 1029
BfaI	CTAG	5 cut(s)	249, 627, 962, 987, 1511
BfmI	CTRYAG	1 cut(s)	633
BfoI	RGCGCY	1 cut(s)	870
BfrI	CTTAAG	2 cut(s)	686, 1289
BisI	GCNGC	6 cut(s)	63, 158, 615, 1356, 1404, 1452
BlpI	GCTNAGC	1 cut(s)	618
BlsI	GCNGC	6 cut(s)	64, 159, 616, 1357, 1405, 1453
Bme1390I	CCNGG	6 cut(s)	121, 774, 982, 1081, 1643, 1644
Bme18I	GGWCC	4 cut(s)	20, 244, 288, 845
BmeT110I	CYCGRG	3 cut(s)	128, 692, 1642
BmgT120I	GGNCC	6 cut(s)	20, 244, 288, 845, 1640, 1654
BmiI	GGNNCC	8 cut(s)	22, 126, 245, 246, 847, 903, 1003, 1104
BmrFI	CCNGG	6 cut(s)	121, 774, 982, 1081, 1643, 1644
BmsI	GCATC	6 cut(s)	478, 511, 685, 715, 1338, 1608
BplI	GAGNNNNNCTC	2 cut(s)	1305, 1337
BpmI	CTGGAG	2 cut(s)	804, 891
Bpu1102I	GCTNAGC	1 cut(s)	618
BpuEI	CTTGAG	2 cut(s)	1307, 1479
BpuMI	CCSGG	2 cut(s)	1643, 1644
BsaI	GGTCTC	2 cut(s)	675, 1029
BsaJI	CCNNGG	6 cut(s)	119, 120, 980, 1079, 1080, 1642
Bsc4I	CCNNNNNNNGG	2 cut(s)	254, 1081
Bse118I	RCCGGY	2 cut(s)	290, 1223
Bse21I	CCTNAGG	1 cut(s)	664
Bse3DI	GCAATG	2 cut(s)	72, 1409
BseBI	CCWGG	4 cut(s)	121, 774, 982, 1081
BseDI	CCNNGG	6 cut(s)	119, 120, 980, 1079, 1080, 1642
BseGI	GGATG	6 cut(s)	436, 448, 526, 730, 1480, 1543
BseLI	CCNNNNNNNGG	2 cut(s)	254, 1081
BseMI	GCAATG	2 cut(s)	72, 1409
BseMII	CTCAG	4 cut(s)	177, 417, 609, 1188
BseRI	GAGGAG	3 cut(s)	337, 734, 1535
BseXI	GCAGC	5 cut(s)	49, 626, 1367, 1390, 1463
BseYI	CCCAGC	1 cut(s)	23
BsgI	GTGCAG	2 cut(s)	273, 576
Bsh1285I	CGRYCG	1 cut(s)	195
BshFI	GGCC	9 cut(s)	374, 483, 594, 985, 1227, 1269, 1613, 1641, 1656
BshNI	GGYRCC	2 cut(s)	901, 1001
BsiEI	CGRYCG	1 cut(s)	195
BsiHKAI	GWGCWC	2 cut(s)	570, 624
BsiHKCI	CYCGRG	3 cut(s)	128, 692, 1642
BsiSI	CCGG	3 cut(s)	291, 1224, 1643
BslFI	GGGAC	4 cut(s)	230, 345, 831, 1311
BslI	CCNNNNNNNGG	2 cut(s)	254, 1081
BsmAI	GTCTC	3 cut(s)	182, 675, 1029
BsmBI	CGTCTC	1 cut(s)	182
BsmFI	GGGAC	4 cut(s)	230, 345, 831, 1311
BsmI	GAATGC	1 cut(s)	1029
BsnI	GGCC	9 cut(s)	374, 483, 594, 985, 1227, 1269, 1613, 1641, 1656
Bso31I	GGTCTC	2 cut(s)	675, 1029
BsoBI	CYCGRG	3 cut(s)	128, 692, 1642
Bsp1286I	GDGCHC	3 cut(s)	120, 570, 624
Bsp143I	GATC	4 cut(s)	976, 1342, 1438, 1570
Bsp1720I	GCTNAGC	1 cut(s)	618
BspACI	CCGC	5 cut(s)	158, 561, 1125, 1295, 1374
BspANI	GGCC	9 cut(s)	374, 483, 594, 985, 1227, 1269, 1613, 1641, 1656
BspCNI	CTCAG	4 cut(s)	178, 418, 610, 1189
BspLI	GGNNCC	8 cut(s)	22, 126, 245, 246, 847, 903, 1003, 1104
BspPI	GGATC	1 cut(s)	971
BspQI	GCTCTTC	1 cut(s)	575
BspT107I	GGYRCC	2 cut(s)	901, 1001
BspTI	CTTAAG	2 cut(s)	686, 1289
BspTNI	GGTCTC	2 cut(s)	675, 1029
BsrDI	GCAATG	2 cut(s)	72, 1409
BsrFI	RCCGGY	2 cut(s)	290, 1223
BssAI	RCCGGY	2 cut(s)	290, 1223
BssECI	CCNNGG	6 cut(s)	119, 120, 980, 1079, 1080, 1642
BssMI	GATC	4 cut(s)	976, 1342, 1438, 1570
Bst2UI	CCWGG	4 cut(s)	121, 774, 982, 1081
Bst4CI	ACNGT	2 cut(s)	109, 1001
Bst6I	CTCTTC	3 cut(s)	144, 233, 575
BstAFI	CTTAAG	2 cut(s)	686, 1289
BstC8I	GCNNGC	7 cut(s)	394, 481, 559, 655, 1225, 1353, 1658
BstDEI	CTNAG	7 cut(s)	186, 426, 618, 664, 1133, 1184, 1197
BstEII	GGTNACC	1 cut(s)	169
BstENI	CCTNNNNNAGG	1 cut(s)	252
BstF5I	GGATG	6 cut(s)	436, 448, 526, 730, 1480, 1543
BstH2I	RGCGCY	1 cut(s)	870
BstHHI	GCGC	2 cut(s)	869, 1060
BstKTI	GATC	4 cut(s)	979, 1345, 1441, 1573
BstMAI	GTCTC	3 cut(s)	182, 675, 1029
BstMBI	GATC	4 cut(s)	976, 1342, 1438, 1570
BstMCI	CGRYCG	1 cut(s)	195
BstMWI	GCNNNNNNNGC	4 cut(s)	154, 958, 1057, 1653
BstNI	CCWGG	4 cut(s)	121, 774, 982, 1081
BstPI	GGTNACC	1 cut(s)	169
BstSCI	CCNGG	6 cut(s)	119, 772, 980, 1079, 1641, 1642
BstSFI	CTRYAG	1 cut(s)	633
BstV1I	GCAGC	5 cut(s)	49, 626, 1367, 1390, 1463
BstX2I	RGATCY	1 cut(s)	976
BstYI	RGATCY	1 cut(s)	976
Bsu36I	CCTNAGG	1 cut(s)	664
BsuRI	GGCC	9 cut(s)	374, 483, 594, 985, 1227, 1269, 1613, 1641, 1656
BtsCI	GGATG	6 cut(s)	436, 448, 526, 730, 1480, 1543
BtsI	GCAGTG	1 cut(s)	1270
BtsIMutI	CAGTG	2 cut(s)	1254, 1270
Cac8I	GCNNGC	7 cut(s)	394, 481, 559, 655, 1225, 1353, 1658
CaiI	CAGNNNCTG	1 cut(s)	59
CfoI	GCGC	2 cut(s)	869, 1060
Cfr10I	RCCGGY	2 cut(s)	290, 1223
Cfr13I	GGNCC	6 cut(s)	20, 244, 288, 845, 1640, 1654
Cfr9I	CCCGGG	1 cut(s)	1642
CseI	GACGC	1 cut(s)	1596
CviAII	CATG	5 cut(s)	536, 673, 953, 1061, 1615
DdeI	CTNAG	7 cut(s)	186, 426, 618, 664, 1133, 1184, 1197
DpnI	GATC	4 cut(s)	978, 1344, 1440, 1572
DpnII	GATC	4 cut(s)	976, 1342, 1438, 1570
DraI	TTTAAA	1 cut(s)	1419
EaeI	YGGCCR	3 cut(s)	592, 1267, 1611
Eam1104I	CTCTTC	3 cut(s)	144, 233, 575
EarI	CTCTTC	3 cut(s)	144, 233, 575
Ecl136II	GAGCTC	2 cut(s)	568, 622
Eco24I	GRGCYC	3 cut(s)	120, 570, 624
Eco31I	GGTCTC	2 cut(s)	675, 1029
Eco47I	GGWCC	4 cut(s)	20, 244, 288, 845
Eco47III	AGCGCT	1 cut(s)	868
Eco53kI	GAGCTC	2 cut(s)	568, 622
Eco57I	CTGAAG	2 cut(s)	1190, 1230
Eco81I	CCTNAGG	1 cut(s)	664
Eco88I	CYCGRG	3 cut(s)	128, 692, 1642
Eco91I	GGTNACC	1 cut(s)	169
EcoICRI	GAGCTC	2 cut(s)	568, 622
EcoNI	CCTNNNNNAGG	1 cut(s)	252
EcoO109I	RGGNCCY	2 cut(s)	244, 1654
EcoO65I	GGTNACC	1 cut(s)	169
EcoRII	CCWGG	4 cut(s)	119, 772, 980, 1079
EcoT22I	ATGCAT	2 cut(s)	471, 678
EcoT38I	GRGCYC	3 cut(s)	120, 570, 624
Esp3I	CGTCTC	1 cut(s)	182
FaeI	CATG	5 cut(s)	539, 676, 956, 1064, 1618
FalI	AAGNNNNNCTT	4 cut(s)	26, 58, 1488, 1520
FaqI	GGGAC	4 cut(s)	230, 345, 831, 1311
FatI	CATG	5 cut(s)	535, 672, 952, 1060, 1614
FauI	CCCGC	1 cut(s)	1288
Fnu4HI	GCNGC	6 cut(s)	63, 158, 615, 1356, 1404, 1452
FokI	GGATG	6 cut(s)	443, 455, 533, 737, 1487, 1550
FriOI	GRGCYC	3 cut(s)	120, 570, 624
Fsp4HI	GCNGC	6 cut(s)	63, 158, 615, 1356, 1404, 1452
FspBI	CTAG	5 cut(s)	249, 627, 962, 987, 1511
FspI	TGCGCA	1 cut(s)	1059
GlaI	GCGC	2 cut(s)	868, 1059
GluI	GCNGC	6 cut(s)	63, 158, 615, 1356, 1404, 1452
GsaI	CCCAGC	1 cut(s)	27
GsuI	CTGGAG	2 cut(s)	804, 891
HaeII	RGCGCY	1 cut(s)	870
HaeIII	GGCC	9 cut(s)	374, 483, 594, 985, 1227, 1269, 1613, 1641, 1656
HapII	CCGG	3 cut(s)	291, 1224, 1643
HgaI	GACGC	1 cut(s)	1596
HhaI	GCGC	2 cut(s)	869, 1060
Hin1II	CATG	5 cut(s)	539, 676, 956, 1064, 1618
Hin6I	GCGC	2 cut(s)	867, 1058
HinP1I	GCGC	2 cut(s)	867, 1058
HindIII	AAGCTT	1 cut(s)	651
HinfI	GANTC	5 cut(s)	131, 669, 877, 1121, 1328
HpaII	CCGG	3 cut(s)	291, 1224, 1643
HphI	GGTGA	3 cut(s)	163, 575, 968
Hpy166II	GTNNAC	1 cut(s)	786
Hpy188I	TCNGA	8 cut(s)	462, 976, 997, 1034, 1210, 1333, 1347, 1685
Hpy8I	GTNNAC	1 cut(s)	786
HpyAV	CCTTC	3 cut(s)	295, 364, 1645
HpyCH4III	ACNGT	2 cut(s)	109, 1001
HpyF10VI	GCNNNNNNNGC	4 cut(s)	154, 958, 1057, 1653
HpyF3I	CTNAG	7 cut(s)	186, 426, 618, 664, 1133, 1184, 1197
Hsp92II	CATG	5 cut(s)	539, 676, 956, 1064, 1618
HspAI	GCGC	2 cut(s)	867, 1058
KflI	GGGWCCC	1 cut(s)	244
KroI	GCCGGC	1 cut(s)	1223
KroNI	GCCGGC	1 cut(s)	1225
Kzo9I	GATC	4 cut(s)	976, 1342, 1438, 1570
LguI	GCTCTTC	1 cut(s)	575
LmnI	GCTCC	5 cut(s)	823, 864, 925, 1108, 1313
Lsp1109I	GCAGC	5 cut(s)	49, 626, 1367, 1390, 1463
LweI	GCATC	6 cut(s)	478, 511, 685, 715, 1338, 1608
MaeI	CTAG	5 cut(s)	249, 627, 962, 987, 1511
MaeIII	GTNAC	2 cut(s)	169, 349
MalI	GATC	4 cut(s)	978, 1344, 1440, 1572
MboI	GATC	4 cut(s)	976, 1342, 1438, 1570
MflI	RGATCY	1 cut(s)	976
MhlI	GDGCHC	3 cut(s)	120, 570, 624
MlsI	TGGCCA	3 cut(s)	594, 1269, 1613
MluNI	TGGCCA	3 cut(s)	594, 1269, 1613
MlyI	GAGTC	3 cut(s)	140, 678, 1337
MmeI	TCCRAC	2 cut(s)	619, 778
Mox20I	TGGCCA	3 cut(s)	594, 1269, 1613
Mph1103I	ATGCAT	2 cut(s)	471, 678
MroNI	GCCGGC	1 cut(s)	1223
MroXI	GAANNNNTTC	1 cut(s)	41
MscI	TGGCCA	3 cut(s)	594, 1269, 1613
MseI	TTAA	7 cut(s)	687, 735, 893, 1142, 1290, 1418, 1677
MslI	CAYNNNNRTG	1 cut(s)	489
Msp20I	TGGCCA	3 cut(s)	594, 1269, 1613
MspA1I	CMGCKG	1 cut(s)	617
MspCI	CTTAAG	2 cut(s)	686, 1289
MspI	CCGG	3 cut(s)	291, 1224, 1643
MspR9I	CCNGG	6 cut(s)	121, 774, 982, 1081, 1643, 1644
Mva1269I	GAATGC	1 cut(s)	1029
MvaI	CCWGG	4 cut(s)	121, 774, 982, 1081
MwoI	GCNNNNNNNGC	4 cut(s)	154, 958, 1057, 1653
NaeI	GCCGGC	1 cut(s)	1225
NciI	CCSGG	2 cut(s)	1643, 1644
NdeII	GATC	4 cut(s)	976, 1342, 1438, 1570
NgoMIV	GCCGGC	1 cut(s)	1223
NlaIII	CATG	5 cut(s)	539, 676, 956, 1064, 1618
NlaIV	GGNNCC	8 cut(s)	22, 126, 245, 246, 847, 903, 1003, 1104
NmuCI	GTSAC	1 cut(s)	169
NsbI	TGCGCA	1 cut(s)	1059
NsiI	ATGCAT	2 cut(s)	471, 678
PasI	CCCWGGG	2 cut(s)	120, 1080
PciSI	GCTCTTC	1 cut(s)	575
PcsI	WCGNNNNNNNCGW	1 cut(s)	197
PctI	GAATGC	1 cut(s)	1029
PdiI	GCCGGC	1 cut(s)	1225
PdmI	GAANNNNTTC	1 cut(s)	41
PfeI	GAWTC	2 cut(s)	877, 1121
PkrI	GCNGC	6 cut(s)	64, 159, 616, 1357, 1405, 1453
PleI	GAGTC	3 cut(s)	139, 677, 1336
PpsI	GAGTC	3 cut(s)	139, 677, 1336
PpuMI	RGGWCCY	1 cut(s)	244
Psp124BI	GAGCTC	2 cut(s)	570, 624
Psp5II	RGGWCCY	1 cut(s)	244
Psp6I	CCWGG	4 cut(s)	119, 772, 980, 1079
PspEI	GGTNACC	1 cut(s)	169
PspFI	CCCAGC	1 cut(s)	23
PspGI	CCWGG	4 cut(s)	119, 772, 980, 1079
PspN4I	GGNNCC	8 cut(s)	22, 126, 245, 246, 847, 903, 1003, 1104
PspPI	GGNCC	6 cut(s)	20, 244, 288, 845, 1640, 1654
PspPPI	RGGWCCY	1 cut(s)	244
PsrI	GAACNNNNNNTAC	2 cut(s)	1524, 1556
PstNI	CAGNNNCTG	1 cut(s)	59
PsuI	RGATCY	1 cut(s)	976
PvuII	CAGCTG	1 cut(s)	617
RseI	CAYNNNNRTG	1 cut(s)	489
SacI	GAGCTC	2 cut(s)	570, 624
SapI	GCTCTTC	1 cut(s)	575
SaqAI	TTAA	7 cut(s)	687, 735, 893, 1142, 1290, 1418, 1677
SatI	GCNGC	6 cut(s)	63, 158, 615, 1356, 1404, 1452
Sau3AI	GATC	4 cut(s)	976, 1342, 1438, 1570
Sau96I	GGNCC	6 cut(s)	20, 244, 288, 845, 1640, 1654
SchI	GAGTC	3 cut(s)	140, 678, 1337
ScrFI	CCNGG	6 cut(s)	121, 774, 982, 1081, 1643, 1644
SduI	GDGCHC	3 cut(s)	120, 570, 624
SfaNI	GCATC	6 cut(s)	478, 511, 685, 715, 1338, 1608
SfcI	CTRYAG	1 cut(s)	633
SinI	GGWCC	4 cut(s)	20, 244, 288, 845
SmaI	CCCGGG	1 cut(s)	1644
SmiMI	CAYNNNNRTG	1 cut(s)	489
SmlI	CTYRAG	4 cut(s)	686, 1289, 1322, 1494
SmoI	CTYRAG	4 cut(s)	686, 1289, 1322, 1494
SrfI	GCCCGGGC	1 cut(s)	1644
SsiI	CCGC	5 cut(s)	158, 561, 1125, 1295, 1374
SspI	AATATT	1 cut(s)	936
SspMI	CTAG	5 cut(s)	249, 627, 962, 987, 1511
SstI	GAGCTC	2 cut(s)	570, 624
StyD4I	CCNGG	6 cut(s)	119, 772, 980, 1079, 1641, 1642
TaaI	ACNGT	2 cut(s)	109, 1001
TaqI	TCGA	6 cut(s)	366, 401, 573, 679, 1548, 1569
TaqII	GACCGA	1 cut(s)	209
TauI	GCSGC	1 cut(s)	160
TfiI	GAWTC	2 cut(s)	877, 1121
Tru1I	TTAA	7 cut(s)	687, 735, 893, 1142, 1290, 1418, 1677
Tru9I	TTAA	7 cut(s)	687, 735, 893, 1142, 1290, 1418, 1677
TscAI	CASTG	2 cut(s)	1261, 1270
TseFI	GTSAC	1 cut(s)	169
TseI	GCWGC	5 cut(s)	62, 614, 1355, 1403, 1451
Tsp45I	GTSAC	1 cut(s)	169
TspDTI	ATGAA	6 cut(s)	92, 251, 524, 960, 1077, 1175
TspGWI	ACGGA	1 cut(s)	938
TspMI	CCCGGG	1 cut(s)	1642
TspRI	CASTG	2 cut(s)	1261, 1270
Vha464I	CTTAAG	2 cut(s)	686, 1289
VpaK11BI	GGWCC	4 cut(s)	20, 244, 288, 845
XagI	CCTNNNNNAGG	1 cut(s)	252
XapI	RAATTY	6 cut(s)	456, 697, 1307, 1335, 1630, 1679
XmaI	CCCGGG	1 cut(s)	1642
XmnI	GAANNNNTTC	1 cut(s)	41
XspI	CTAG	5 cut(s)	249, 627, 962, 987, 1511
Zsp2I	ATGCAT	2 cut(s)	471, 678

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.