Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0002410

Physical Location & Seq

Genomic Coordinates Forward (+)

22491796 .. 22496041

Gene Structure 4246 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG235400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGGGAAACAACTGTGTTGGAAATTCCAAGGACGGGCTTTTCCATTCGGTCTCAAATTCACTCTGGTGGACTCGATCAACCGGGGGTTTGGTTACTTCTACAACTAGAGAAATTAAAAGTAGTGATGCACCACCATCATTGAACAATCAGTCAGAAACTAATCCTCATGATGTTCAAAGCAATCCCCCAGAAGCAATCAAGATGACTACGGAGGGCTCTAAACCAGTGCAGCCCCCAATTCAACCGACGAAGGTTCATCCCGAAAAGCAAAAGGAAGAGGAGACTGAACCAGCAGCACAAGCAGCAATTCCGAAGGGAGAGACTAAACTTCAACAACCGGTAAATCATAGGGATCAAGAGACCAGACCAGCGCAATCCATAACACAAAATGGAGGGACTAATCAGCCAGCAGTGCCTGCGAGACCGAAGAAGCCCCATCATGTCAAGAGGGTATCGAGTGCAGGGCTTCAGGCAGAGTCTGTCTTGCAAACCAAGACAGGTCATTTGAAGGAGTACTACAATTTGGGCCAGAAGCTTGGACATGGACAATTTGGGACAACTTACCTTTGTGTGGAGAAAGCAACCGGAAAGGAATACGCATGCAAATCCATTGCCAAAAGGAAATTGTTGGCAACAGAAGATGTGGAGGATGTGAGGAGGGAGATTCAAATAATGCATCACTTGGCAGGGAATCCCAATGTCATATCGATTAAGGCGGCTTATGAGGATGCTGTTGCAGTTCATGTTGTGATGGAATTATGTGCAGGGGGTGAGCTCTTTGATAGGATTATCAAGAGGGGGCATTACTCTGAAAGAAAGGCAGCTCGGCTAGCAAGGACTATAGTTGGAGTTATAGAAGCTTGCCATTCTTTGGGTGTAATGCATCGCGATCTTAAACCCGAGAACTTTCTTTTTGTTGATGAGGAGGAGGATTCAGCACTCAAAGCTATTGATTTTGGGCTGTCAATATTTTTCAAGCCAGGTGAAACTTTCAATGATGTGGTTGGAAGCCCATATTATGTTGCACCTGAAGTTCTGCGCAAGCGGTATGGTCCAGAAGCAGATGTTTGGAGTGTTGGTGTTATCATTTACATTCTTTTGAGTGGGGTGCCTCCATTCTGGGGTGAAACTGAGCAAGAGATCTTTGAAGAGGTTTTGCATGGTGATCTTGACTTCTCAACAGATCCCTGGCCTAATATTTCAGAAAGTGCGAAAGATTTAGTCAAGAAGATGCTTGTCAGAAACCCCAAAAAGCGGCTAACTGCTCATCAAGTTCTATGTAAGTTCATATTCATATATTTCTATTTACTCAGAATTATTAAGAAAGTGACACAAGGACAATACCCTTTTCAATGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0031984 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042175 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0098827 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_6 EF-hand_7 Pkinase

Protein Analysis

452

Amino Acids

50.5

Weight (kDa)

7.68

Isoelectric Point (pI)

49.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	173 - 427	3.4e-75	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	175 - 427	5.7e-25	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10660 AT3G10660 AT5G04870
fragaria_vesca	FvH4_6g20840 FvH4_6g20840 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490
malus_domestica	MD02G1257300.v1.1 MD07G1063300.v1.1 MD12G1044400.v1.1 MD14G1043300.v1.1
prunus_persica	Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.7G090800_v2.0.a1 Prupe.7G090800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0332341 RchiOBHm_Chr3g0464211 RchiOBHm_Chr3g0477181
rosa_laevigata	RLG00000023739 RLG00000029678
rosa_multiflora	Rmu_sc0000932.1_g000001 Rmu_sc0003422.1_g000006
rosa_roxburghii	Rroxscaffold_4G00318280 Rroxscaffold_6G00404350 Rroxscaffold_6G00404850
rosa_rugosa	Rorug01G0100000 Rorug03G0158600
rosa_samantha	Rh1CG118000 Rh1DG129100 Rh3AG208900 Rh3CG236600 Rh3DG235400
rosa_wichuraiana	Rw1G010080 Rw3G019050 Rw3G019440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1040
AccB1I	GGYRCC	1 cut(s)	1108
AccB7I	CCANNNNNTGG	1 cut(s)	871
AccII	CGCG	1 cut(s)	888
AciI	CCGC	3 cut(s)	716, 1045, 1255
AclWI	GGATC	2 cut(s)	360, 1178
AcsI	RAATTY	2 cut(s)	22, 55
AcuI	CTGAAG	2 cut(s)	452, 1050
AfaI	GTAC	1 cut(s)	515
AfiI	CCNNNNNNNGG	5 cut(s)	33, 571, 871, 1121, 1254
AgeI	ACCGGT	1 cut(s)	337
AjnI	CCWGG	2 cut(s)	979, 1187
AleI	CACNNNNGTG	1 cut(s)	64
AluBI	AGCT	5 cut(s)	535, 775, 824, 860, 947
AluI	AGCT	5 cut(s)	535, 775, 824, 860, 947
Alw21I	GWGCWC	1 cut(s)	777
Alw26I	GTCTC	5 cut(s)	55, 275, 314, 353, 415
AlwI	GGATC	2 cut(s)	360, 1178
AlwNI	CAGNNNCTG	2 cut(s)	416, 479
Ama87I	CYCGRG	1 cut(s)	899
AoxI	GGCC	2 cut(s)	526, 1190
ApeKI	GCWGC	4 cut(s)	229, 293, 302, 821
ApoI	RAATTY	2 cut(s)	22, 55
ArsI	GACNNNNNNTTYG	2 cut(s)	487, 519
AsiGI	ACCGGT	1 cut(s)	337
AspLEI	GCGC	2 cut(s)	373, 1041
AspS9I	GGNCC	2 cut(s)	526, 1052
AsuC2I	CCSGG	1 cut(s)	82
AsuHPI	GGTGA	4 cut(s)	782, 995, 1136, 1175
AsuNHI	GCTAGC	1 cut(s)	829
AvaI	CYCGRG	1 cut(s)	899
AvaII	GGWCC	1 cut(s)	1052
BanI	GGYRCC	1 cut(s)	1108
BanII	GRGCYC	2 cut(s)	218, 777
BarI	GAAGNNNNNNTAC	2 cut(s)	500, 532
Bbv12I	GWGCWC	1 cut(s)	777
BbvI	GCAGC	4 cut(s)	241, 305, 314, 833
BccI	CCATC	3 cut(s)	142, 444, 745
BciT130I	CCWGG	2 cut(s)	981, 1189
BcnI	CCSGG	1 cut(s)	82
BcoDI	GTCTC	5 cut(s)	55, 275, 314, 353, 415
BfaI	CTAG	2 cut(s)	105, 830
BfmI	CTRYAG	1 cut(s)	840
BglII	AGATCT	1 cut(s)	1140
BisI	GCNGC	6 cut(s)	230, 294, 303, 717, 822, 1256
BlsI	GCNGC	6 cut(s)	231, 295, 304, 718, 823, 1257
BmcAI	AGTACT	1 cut(s)	515
Bme1390I	CCNGG	3 cut(s)	82, 981, 1189
Bme18I	GGWCC	1 cut(s)	1052
BmeT110I	CYCGRG	1 cut(s)	899
BmgT120I	GGNCC	2 cut(s)	526, 1052
BmiI	GGNNCC	1 cut(s)	1110
BmrFI	CCNGG	3 cut(s)	82, 981, 1189
BmsI	GCATC	5 cut(s)	115, 685, 718, 892, 1221
BmtI	GCTAGC	1 cut(s)	833
BpuMI	CCSGG	1 cut(s)	82
Bsa29I	ATCGAT	1 cut(s)	707
BsaI	GGTCTC	3 cut(s)	55, 353, 415
BsaJI	CCNNGG	3 cut(s)	27, 81, 1187
BsaWI	WCCGGW	2 cut(s)	337, 584
BsaXI	ACNNNNNCTCC	2 cut(s)	1063, 1093
Bsc4I	CCNNNNNNNGG	5 cut(s)	33, 571, 871, 1121, 1254
Bse118I	RCCGGY	1 cut(s)	337
Bse1I	ACTGG	1 cut(s)	224
Bse3DI	GCAATG	1 cut(s)	609
BseBI	CCWGG	2 cut(s)	981, 1189
BseCI	ATCGAT	1 cut(s)	707
BseDI	CCNNGG	3 cut(s)	27, 81, 1187
BseGI	GGATG	3 cut(s)	256, 655, 733
BseLI	CCNNNNNNNGG	5 cut(s)	33, 571, 871, 1121, 1254
BseMI	GCAATG	1 cut(s)	609
BseMII	CTCAG	2 cut(s)	1122, 1324
BseNI	ACTGG	1 cut(s)	224
BseRI	GAGGAG	4 cut(s)	293, 670, 938, 941
BseXI	GCAGC	4 cut(s)	241, 305, 314, 833
BsgI	GTGCAG	3 cut(s)	248, 480, 783
Bsh1236I	CGCG	1 cut(s)	888
BshFI	GGCC	2 cut(s)	528, 1192
BshNI	GGYRCC	1 cut(s)	1108
BshTI	ACCGGT	1 cut(s)	337
BshVI	ATCGAT	1 cut(s)	707
BsiHKAI	GWGCWC	1 cut(s)	777
BsiHKCI	CYCGRG	1 cut(s)	899
BsiSI	CCGG	3 cut(s)	81, 338, 585
BslFI	GGGAC	2 cut(s)	409, 568
BslI	CCNNNNNNNGG	5 cut(s)	33, 571, 871, 1121, 1254
BsmAI	GTCTC	5 cut(s)	55, 275, 314, 353, 415
BsmFI	GGGAC	2 cut(s)	409, 568
BsnI	GGCC	2 cut(s)	528, 1192
Bso31I	GGTCTC	3 cut(s)	55, 353, 415
BsoBI	CYCGRG	1 cut(s)	899
Bsp1286I	GDGCHC	2 cut(s)	218, 777
Bsp143I	GATC	6 cut(s)	74, 352, 889, 1140, 1165, 1183
Bsp68I	TCGCGA	1 cut(s)	888
BspACI	CCGC	3 cut(s)	716, 1045, 1255
BspANI	GGCC	2 cut(s)	528, 1192
BspCNI	CTCAG	2 cut(s)	1123, 1323
BspDI	ATCGAT	1 cut(s)	707
BspFNI	CGCG	1 cut(s)	888
BspHI	TCATGA	1 cut(s)	166
BspLI	GGNNCC	1 cut(s)	1110
BspOI	GCTAGC	1 cut(s)	833
BspPI	GGATC	2 cut(s)	360, 1178
BspT107I	GGYRCC	1 cut(s)	1108
BspTNI	GGTCTC	3 cut(s)	55, 353, 415
BsrDI	GCAATG	1 cut(s)	609
BsrFI	RCCGGY	1 cut(s)	337
BsrI	ACTGG	1 cut(s)	224
BssAI	RCCGGY	1 cut(s)	337
BssECI	CCNNGG	3 cut(s)	27, 81, 1187
BssMI	GATC	6 cut(s)	74, 352, 889, 1140, 1165, 1183
BssT1I	CCWWGG	1 cut(s)	27
Bst2UI	CCWGG	2 cut(s)	981, 1189
Bst4CI	ACNGT	1 cut(s)	14
Bst6I	CTCTTC	2 cut(s)	270, 1143
BstAPI	GCANNNNNTGC	1 cut(s)	416
BstC8I	GCNNGC	6 cut(s)	408, 417, 601, 831, 862, 1043
BstDEI	CTNAG	2 cut(s)	1131, 1310
BstF5I	GGATG	3 cut(s)	256, 655, 733
BstFNI	CGCG	1 cut(s)	888
BstHHI	GCGC	2 cut(s)	373, 1041
BstKTI	GATC	6 cut(s)	77, 355, 892, 1143, 1168, 1186
BstMAI	GTCTC	5 cut(s)	55, 275, 314, 353, 415
BstMBI	GATC	6 cut(s)	74, 352, 889, 1140, 1165, 1183
BstMWI	GCNNNNNNNGC	6 cut(s)	299, 302, 412, 416, 830, 944
BstNI	CCWGG	2 cut(s)	981, 1189
BstNSI	RCATGY	1 cut(s)	603
BstSCI	CCNGG	3 cut(s)	80, 979, 1187
BstSFI	CTRYAG	1 cut(s)	840
BstUI	CGCG	1 cut(s)	888
BstV1I	GCAGC	4 cut(s)	241, 305, 314, 833
BstX2I	RGATCY	2 cut(s)	1140, 1183
BstXI	CCANNNNNNTGG	1 cut(s)	536
BstYI	RGATCY	2 cut(s)	1140, 1183
Bsu15I	ATCGAT	1 cut(s)	707
BsuRI	GGCC	2 cut(s)	528, 1192
BsuTUI	ATCGAT	1 cut(s)	707
BtgZI	GCGATG	1 cut(s)	869
BtsCI	GGATG	3 cut(s)	256, 655, 733
BtsI	GCAGTG	1 cut(s)	417
BtsIMutI	CAGTG	2 cut(s)	231, 417
BtuMI	TCGCGA	1 cut(s)	888
Cac8I	GCNNGC	6 cut(s)	408, 417, 601, 831, 862, 1043
CaiI	CAGNNNCTG	2 cut(s)	416, 479
CciI	TCATGA	1 cut(s)	166
CfoI	GCGC	2 cut(s)	373, 1041
Cfr10I	RCCGGY	1 cut(s)	337
Cfr13I	GGNCC	2 cut(s)	526, 1052
ClaI	ATCGAT	1 cut(s)	707
Csp6I	GTAC	1 cut(s)	514
CspAI	ACCGGT	1 cut(s)	337
CspCI	CAANNNNNGTGG	2 cut(s)	120, 155
CviAII	CATG	6 cut(s)	167, 440, 542, 600, 743, 1160
CviQI	GTAC	1 cut(s)	514
DdeI	CTNAG	2 cut(s)	1131, 1310
DpnI	GATC	6 cut(s)	76, 354, 891, 1142, 1167, 1185
DpnII	GATC	6 cut(s)	74, 352, 889, 1140, 1165, 1183
Eam1104I	CTCTTC	2 cut(s)	270, 1143
EarI	CTCTTC	2 cut(s)	270, 1143
Ecl136II	GAGCTC	1 cut(s)	775
Eco130I	CCWWGG	1 cut(s)	27
Eco24I	GRGCYC	2 cut(s)	218, 777
Eco31I	GGTCTC	3 cut(s)	55, 353, 415
Eco47I	GGWCC	1 cut(s)	1052
Eco53kI	GAGCTC	1 cut(s)	775
Eco57I	CTGAAG	2 cut(s)	452, 1050
Eco88I	CYCGRG	1 cut(s)	899
EcoICRI	GAGCTC	1 cut(s)	775
EcoRII	CCWGG	2 cut(s)	979, 1187
EcoT14I	CCWWGG	1 cut(s)	27
EcoT22I	ATGCAT	2 cut(s)	678, 885
EcoT38I	GRGCYC	2 cut(s)	218, 777
ErhI	CCWWGG	1 cut(s)	27
FaeI	CATG	6 cut(s)	170, 443, 545, 603, 746, 1163
FaqI	GGGAC	2 cut(s)	409, 568
FatI	CATG	6 cut(s)	166, 439, 541, 599, 742, 1159
Fnu4HI	GCNGC	6 cut(s)	230, 294, 303, 717, 822, 1256
FokI	GGATG	3 cut(s)	243, 662, 740
FriOI	GRGCYC	2 cut(s)	218, 777
Fsp4HI	GCNGC	6 cut(s)	230, 294, 303, 717, 822, 1256
FspBI	CTAG	2 cut(s)	105, 830
FspI	TGCGCA	1 cut(s)	1040
GlaI	GCGC	2 cut(s)	372, 1040
GluI	GCNGC	6 cut(s)	230, 294, 303, 717, 822, 1256
HaeIII	GGCC	2 cut(s)	528, 1192
HapII	CCGG	3 cut(s)	81, 338, 585
HhaI	GCGC	2 cut(s)	373, 1041
Hin1II	CATG	6 cut(s)	170, 443, 545, 603, 746, 1163
Hin6I	GCGC	2 cut(s)	371, 1039
HinP1I	GCGC	2 cut(s)	371, 1039
HindIII	AAGCTT	2 cut(s)	533, 858
HinfI	GANTC	5 cut(s)	70, 476, 664, 691, 932
HpaII	CCGG	3 cut(s)	81, 338, 585
HphI	GGTGA	4 cut(s)	782, 995, 1136, 1175
Hpy166II	GTNNAC	1 cut(s)	69
Hpy188I	TCNGA	6 cut(s)	154, 312, 811, 1204, 1241, 1313
Hpy8I	GTNNAC	1 cut(s)	69
Hpy99I	CGWCG	1 cut(s)	250
HpyAV	CCTTC	3 cut(s)	244, 307, 502
HpyCH4III	ACNGT	1 cut(s)	14
HpyF10VI	GCNNNNNNNGC	6 cut(s)	299, 302, 412, 416, 830, 944
HpyF3I	CTNAG	2 cut(s)	1131, 1310
Hsp92II	CATG	6 cut(s)	170, 443, 545, 603, 746, 1163
HspAI	GCGC	2 cut(s)	371, 1039
Kzo9I	GATC	6 cut(s)	74, 352, 889, 1140, 1165, 1183
Lsp1109I	GCAGC	4 cut(s)	241, 305, 314, 833
LweI	GCATC	5 cut(s)	115, 685, 718, 892, 1221
MaeI	CTAG	2 cut(s)	105, 830
MaeIII	GTNAC	2 cut(s)	91, 1327
MalI	GATC	6 cut(s)	76, 354, 891, 1142, 1167, 1185
MboI	GATC	6 cut(s)	74, 352, 889, 1140, 1165, 1183
MboII	GAAGA	5 cut(s)	287, 439, 650, 1160, 1240
MflI	RGATCY	2 cut(s)	1140, 1183
MhlI	GDGCHC	2 cut(s)	218, 777
MlyI	GAGTC	2 cut(s)	64, 485
MmeI	TCCRAC	2 cut(s)	826, 985
Mph1103I	ATGCAT	2 cut(s)	678, 885
MseI	TTAA	4 cut(s)	114, 711, 894, 1320
MslI	CAYNNNNRTG	1 cut(s)	64
MspI	CCGG	3 cut(s)	81, 338, 585
MspR9I	CCNGG	3 cut(s)	82, 981, 1189
MvaI	CCWGG	2 cut(s)	981, 1189
MvnI	CGCG	1 cut(s)	888
MwoI	GCNNNNNNNGC	6 cut(s)	299, 302, 412, 416, 830, 944
NciI	CCSGG	1 cut(s)	82
NdeII	GATC	6 cut(s)	74, 352, 889, 1140, 1165, 1183
NheI	GCTAGC	1 cut(s)	829
NlaIII	CATG	6 cut(s)	170, 443, 545, 603, 746, 1163
NlaIV	GGNNCC	1 cut(s)	1110
NmeAIII	GCCGAG	1 cut(s)	805
NmuCI	GTSAC	1 cut(s)	1327
NruI	TCGCGA	1 cut(s)	888
NsbI	TGCGCA	1 cut(s)	1040
NsiI	ATGCAT	2 cut(s)	678, 885
NspI	RCATGY	1 cut(s)	603
OliI	CACNNNNGTG	1 cut(s)	64
PaeI	GCATGC	1 cut(s)	603
PagI	TCATGA	1 cut(s)	166
PfeI	GAWTC	3 cut(s)	664, 691, 932
PflMI	CCANNNNNTGG	1 cut(s)	871
PinAI	ACCGGT	1 cut(s)	337
PkrI	GCNGC	6 cut(s)	231, 295, 304, 718, 823, 1257
PleI	GAGTC	2 cut(s)	64, 484
PpsI	GAGTC	2 cut(s)	64, 484
Psp124BI	GAGCTC	1 cut(s)	777
Psp6I	CCWGG	2 cut(s)	979, 1187
PspGI	CCWGG	2 cut(s)	979, 1187
PspN4I	GGNNCC	1 cut(s)	1110
PspPI	GGNCC	2 cut(s)	526, 1052
PstNI	CAGNNNCTG	2 cut(s)	416, 479
PsuI	RGATCY	2 cut(s)	1140, 1183
RruI	TCGCGA	1 cut(s)	888
RsaI	GTAC	1 cut(s)	515
RsaNI	GTAC	1 cut(s)	514
RseI	CAYNNNNRTG	1 cut(s)	64
SacI	GAGCTC	1 cut(s)	777
SaqAI	TTAA	4 cut(s)	114, 711, 894, 1320
SatI	GCNGC	6 cut(s)	230, 294, 303, 717, 822, 1256
Sau3AI	GATC	6 cut(s)	74, 352, 889, 1140, 1165, 1183
Sau96I	GGNCC	2 cut(s)	526, 1052
ScaI	AGTACT	1 cut(s)	515
SchI	GAGTC	2 cut(s)	64, 485
ScrFI	CCNGG	3 cut(s)	82, 981, 1189
SduI	GDGCHC	2 cut(s)	218, 777
SfaNI	GCATC	5 cut(s)	115, 685, 718, 892, 1221
SfcI	CTRYAG	1 cut(s)	840
SinI	GGWCC	1 cut(s)	1052
SmiMI	CAYNNNNRTG	1 cut(s)	64
SphI	GCATGC	1 cut(s)	603
SsiI	CCGC	3 cut(s)	716, 1045, 1255
SspI	AATATT	2 cut(s)	969, 1198
SspMI	CTAG	2 cut(s)	105, 830
SstI	GAGCTC	1 cut(s)	777
StyD4I	CCNGG	3 cut(s)	80, 979, 1187
StyI	CCWWGG	1 cut(s)	27
TaaI	ACNGT	1 cut(s)	14
TaqI	TCGA	3 cut(s)	73, 455, 707
TaqII	GACCGA	2 cut(s)	37, 439
TatI	WGTACW	1 cut(s)	513
TauI	GCSGC	2 cut(s)	719, 1258
TfiI	GAWTC	3 cut(s)	664, 691, 932
Tru1I	TTAA	4 cut(s)	114, 711, 894, 1320
Tru9I	TTAA	4 cut(s)	114, 711, 894, 1320
TscAI	CASTG	2 cut(s)	231, 417
TseFI	GTSAC	1 cut(s)	1327
TseI	GCWGC	4 cut(s)	229, 293, 302, 821
Tsp45I	GTSAC	1 cut(s)	1327
TspDTI	ATGAA	4 cut(s)	245, 731, 1276, 1282
TspGWI	ACGGA	1 cut(s)	224
TspRI	CASTG	2 cut(s)	231, 417
Van91I	CCANNNNNTGG	1 cut(s)	871
VpaK11BI	GGWCC	1 cut(s)	1052
XapI	RAATTY	2 cut(s)	22, 55
XceI	RCATGY	1 cut(s)	603
XspI	CTAG	2 cut(s)	105, 830
ZrmI	AGTACT	1 cut(s)	515
Zsp2I	ATGCAT	2 cut(s)	678, 885

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.