Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0002410

Physical Location & Seq

Genomic Coordinates Reverse (-)

25622310 .. 25628928

Gene Structure 6619 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG118000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGGGAATACTTGTGTTGGACCCAACATTTCCAAGAATGGCTTCTTCCAATCAGTTTCGGCTGCAATGTGGCGAACCCCTTTGCCTGATGACTCTCTTCATACTAGTGGAGGAGAAACTGCCAATGAGCAGCAGCCCAGGGAACCCGAGTCGCCTCTTCCGGTACAAGACAAGCCCCCGCAACAAGTGATGACCATACCAAAACCTGAAACTGAGCCGAAACAACCCTCCAAACCCAGGAAGCCGCCGCAGATGAAGAGGATCCCTAGTGCAGGGCTTCGTGCTGGTTCAGTGTTGCAAACAAAGACGGGAAAAATAAAGGAGTTTTATAGTTTTGGGAGGAAATTGGGACAGGGGCAGTTTGGGGTAACAACTCTGTGCGTGGAGAAGACCACGGGGAAAGAGTATGCGTGCAAGTCGATTGCAAAAAGGAAGTTGATAACAGACGATGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCATCATCTGGCAGGCCACCCTAATGTTATATCTATAAAGGGTGCTTATGAGGATGCTGTTGCAGTTCATGTAGTTATGGAATTATGTGCAGGAGGTGAGCTCTTTGATAGGATTATCCAGCGTGGCCATTATACAGAAAGAAAGGCAGCTGAGCTCACTAGGACTATAGTCGGAGTTGTAGAAGCTTGCCATTCATTAGGAGTTATGCATCGAGACCTTAAGCCGGAGAATTTTCTCTTTGTCAGTCAGGAGGAGGATGCCCTTCTTAAAACTATTGATTTTGGATTATCTATTTTCTTGAAGCCAGGAGAAAAGTTTACTGATGTGGTAGGGAGCCCATATTATGTCGCTCCAGAAGTCTTACGAAAGCGTTATGGTCCAGAAGCAGATGTTTGGAGCGCTGGAGTGATTCTTTATATTTTATTAAGTGGGGTACCTCCATTTTGGGCTGAAACGGAGCAAGGAATATTTGATCAGGTCTTGCATGGTGAGCTAGACTTTTCATCAGATCCCTGGCCTAGTATCTCTGACGGTGCCAAAGATTTAGTAAGGAGAATGCTTGTCCGAGACCCTAGAAAGCGGCTGACTGCACACGAAGTTTTGTTTCTAAGTCGCTTAAAGCAATTTTCAGCTATGAACAAGCTGAAGAAAATGGCTCTTAGGGTTATTGCTGAGAGCTTATCTGAAGAAGAAATAGCTGGCCTGAAAGAAATGTTCAAGATGATAGACACTGACGGCAGTGGCCAAATCACTTTTGAAGAACTTAAGGCTGGACTAAAAAAATTTGGAGCTACTCTCAAGGAGTCAGAAATTTATGATCTGATGCAAGCAGCAGATGTAGATAATAGCGGAACCATTGATTATGGGGAATTTGTTGCGGCAACATTGCATTTAAACAAAATTGAGAGAGAAGATCATCTGTTTGCAGCTTTCTCCTACTTTGATAAGGATGGAAGTGGCTACATTACTCAAGATGAGCTTCAACTAGCTTGTGAGGAGTTTGGCGTAGAGGATGTTCGCCTCGAAGAAATGATAAGAGAAGTCGATCAGGATAATGATGGACGCATAGATTACAACGAGTTTGTGGCTATGATGCAAAAAGGAAATTTTGTTGGCCCGGCCAAGAAGGGCCTGCAAAGTAGCTTCAGTATTAACTTCAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005509 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0031090 GO:0031903 GO:0031984 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042175 GO:0042221 GO:0042579 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0098588 GO:0098805 GO:0098827 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_6 Pkinase

Protein Analysis

549

Amino Acids

61.38

Weight (kDa)

5.5

Isoelectric Point (pI)

42.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	110 - 363	3.7e-74	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	112 - 361	3.8e-24	Protein tyrosine and serine/threonine kinase
EF-hand_1	PF00036	397 - 424	4.1e-09	EF hand domain
EF-hand_7	PF13499	397 - 456	5.2e-13	EF-hand domain pair
EF-hand_6	PF13405	397 - 425	1.1e-07	EF-hand domain
EF-hand_5	PF13202	397 - 419	9.9e-07	EF hand
EF-hand_8	PF13833	409 - 457	8.9e-08	EF-hand domain pair
EF-hand_7	PF13499	466 - 528	3.8e-15	EF-hand domain pair
EF-hand_6	PF13405	470 - 497	3.5e-06	EF-hand domain
EF-hand_1	PF00036	503 - 529	6.9e-09	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0002410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10660 AT3G10660 AT5G04870
fragaria_vesca	FvH4_6g20840 FvH4_6g20840 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490
malus_domestica	MD02G1257300.v1.1 MD07G1063300.v1.1 MD12G1044400.v1.1 MD14G1043300.v1.1
prunus_persica	Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.7G090800_v2.0.a1 Prupe.7G090800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0332341 RchiOBHm_Chr3g0464211 RchiOBHm_Chr3g0477181
rosa_laevigata	RLG00000023739 RLG00000029678
rosa_multiflora	Rmu_sc0000932.1_g000001 Rmu_sc0003422.1_g000006
rosa_roxburghii	Rroxscaffold_4G00318280 Rroxscaffold_6G00404350 Rroxscaffold_6G00404850
rosa_rugosa	Rorug01G0100000 Rorug03G0158600
rosa_samantha	Rh1CG118000 Rh1DG129100 Rh3AG208900 Rh3CG236600 Rh3DG235400
rosa_wichuraiana	Rw1G010080 Rw3G019050 Rw3G019440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	919
AccB1I	GGYRCC	2 cut(s)	919, 1019
AciI	CCGC	6 cut(s)	179, 245, 248, 1066, 1335, 1364
AclWI	GGATC	3 cut(s)	256, 269, 989
AcoI	YGGCCR	3 cut(s)	610, 1228, 1605
AcsI	RAATTY	5 cut(s)	715, 1268, 1296, 1355, 1591
AcuI	CTGAAG	4 cut(s)	1151, 1191, 1615, 1627
AfaI	GTAC	2 cut(s)	165, 921
AfeI	AGCGCT	1 cut(s)	886
AfiI	CCNNNNNNNGG	3 cut(s)	237, 272, 709
AflII	CTTAAG	2 cut(s)	704, 1250
AgsI	TTSAA	4 cut(s)	787, 1204, 1244, 1469
AhlI	ACTAGT	1 cut(s)	104
AjnI	CCWGG	4 cut(s)	137, 236, 790, 998
AjuI	GAANNNNNNNTTGG	2 cut(s)	26, 58
Alw21I	GWGCWC	2 cut(s)	588, 642
Alw26I	GTCTC	2 cut(s)	693, 1047
AlwI	GGATC	3 cut(s)	256, 269, 989
Ama87I	CYCGRG	1 cut(s)	146
Aor51HI	AGCGCT	1 cut(s)	886
AoxI	GGCC	8 cut(s)	499, 610, 1001, 1186, 1228, 1600, 1605, 1615
ApeKI	GCWGC	6 cut(s)	62, 130, 133, 632, 1316, 1412
ApoI	RAATTY	5 cut(s)	715, 1268, 1296, 1355, 1591
Asp700I	GAANNNNTTC	1 cut(s)	41
Asp718I	GGTACC	1 cut(s)	919
AspLEI	GCGC	1 cut(s)	887
AspS9I	GGNCC	4 cut(s)	20, 863, 1601, 1615
AsuC2I	CCSGG	1 cut(s)	1604
AsuHPI	GGTGA	2 cut(s)	593, 986
AvaI	CYCGRG	1 cut(s)	146
AvaII	GGWCC	2 cut(s)	20, 863
BalI	TGGCCA	2 cut(s)	612, 1230
BamHI	GGATCC	1 cut(s)	261
BanI	GGYRCC	2 cut(s)	919, 1019
BanII	GRGCYC	3 cut(s)	588, 642, 824
BbsI	GAAGAC	1 cut(s)	395
Bbv12I	GWGCWC	2 cut(s)	588, 642
BbvI	GCAGC	6 cut(s)	49, 142, 145, 644, 1328, 1424
BccI	CCATC	2 cut(s)	1430, 1538
BceAI	ACGGC	1 cut(s)	1237
BciT130I	CCWGG	4 cut(s)	139, 238, 792, 1000
BclI	TGATCA	1 cut(s)	958
BcnI	CCSGG	1 cut(s)	1604
BcoDI	GTCTC	2 cut(s)	693, 1047
BcuI	ACTAGT	1 cut(s)	104
BfaI	CTAG	7 cut(s)	105, 267, 645, 980, 1005, 1059, 1472
BfmI	CTRYAG	1 cut(s)	651
BfoI	RGCGCY	1 cut(s)	888
BfrI	CTTAAG	2 cut(s)	704, 1250
BlpI	GCTNAGC	1 cut(s)	636
Bme1390I	CCNGG	5 cut(s)	139, 238, 792, 1000, 1604
Bme18I	GGWCC	2 cut(s)	20, 863
BmeT110I	CYCGRG	1 cut(s)	146
BmgT120I	GGNCC	4 cut(s)	20, 863, 1601, 1615
BmiI	GGNNCC	7 cut(s)	22, 144, 263, 821, 921, 1021, 1339
BmrFI	CCNGG	5 cut(s)	139, 238, 792, 1000, 1604
BmsI	GCATC	6 cut(s)	496, 529, 703, 733, 1299, 1569
BoxI	GACNNNNGTC	1 cut(s)	653
BpiI	GAAGAC	1 cut(s)	395
BplI	GAGNNNNNCTC	4 cut(s)	570, 602, 1266, 1298
BpmI	CTGGAG	2 cut(s)	822, 909
Bpu1102I	GCTNAGC	1 cut(s)	636
BpuEI	CTTGAG	2 cut(s)	1268, 1440
BpuMI	CCSGG	1 cut(s)	1604
BsaI	GGTCTC	2 cut(s)	693, 1047
BsaJI	CCNNGG	5 cut(s)	137, 138, 236, 393, 998
BsaWI	WCCGGW	1 cut(s)	160
Bsc4I	CCNNNNNNNGG	3 cut(s)	237, 272, 709
Bse3DI	GCAATG	2 cut(s)	72, 1370
BseBI	CCWGG	4 cut(s)	139, 238, 792, 1000
BseDI	CCNNGG	5 cut(s)	137, 138, 236, 393, 998
BseGI	GGATG	5 cut(s)	466, 544, 748, 1441, 1504
BseLI	CCNNNNNNNGG	3 cut(s)	237, 272, 709
BseMI	GCAATG	2 cut(s)	72, 1370
BseMII	CTCAG	3 cut(s)	204, 627, 1149
BseRI	GAGGAG	4 cut(s)	126, 481, 752, 1496
BseXI	GCAGC	6 cut(s)	49, 142, 145, 644, 1328, 1424
BsgI	GTGCAG	3 cut(s)	291, 594, 1059
BshFI	GGCC	8 cut(s)	501, 612, 1003, 1188, 1230, 1602, 1607, 1617
BshNI	GGYRCC	2 cut(s)	919, 1019
BsiHKAI	GWGCWC	2 cut(s)	588, 642
BsiHKCI	CYCGRG	1 cut(s)	146
BsiSI	CCGG	3 cut(s)	161, 710, 1604
BslFI	GGGAC	1 cut(s)	363
BslI	CCNNNNNNNGG	3 cut(s)	237, 272, 709
BsmAI	GTCTC	2 cut(s)	693, 1047
BsmFI	GGGAC	1 cut(s)	363
BsmI	GAATGC	1 cut(s)	1047
BsnI	GGCC	8 cut(s)	501, 612, 1003, 1188, 1230, 1602, 1607, 1617
Bso31I	GGTCTC	2 cut(s)	693, 1047
BsoBI	CYCGRG	1 cut(s)	146
Bsp1286I	GDGCHC	3 cut(s)	588, 642, 824
Bsp143I	GATC	6 cut(s)	261, 958, 994, 1303, 1399, 1531
Bsp1720I	GCTNAGC	1 cut(s)	636
BspACI	CCGC	6 cut(s)	179, 245, 248, 1066, 1335, 1364
BspANI	GGCC	8 cut(s)	501, 612, 1003, 1188, 1230, 1602, 1607, 1617
BspCNI	CTCAG	3 cut(s)	205, 628, 1150
BspLI	GGNNCC	7 cut(s)	22, 144, 263, 821, 921, 1021, 1339
BspPI	GGATC	3 cut(s)	256, 269, 989
BspT107I	GGYRCC	2 cut(s)	919, 1019
BspTI	CTTAAG	2 cut(s)	704, 1250
BspTNI	GGTCTC	2 cut(s)	693, 1047
BsrDI	GCAATG	2 cut(s)	72, 1370
BssECI	CCNNGG	5 cut(s)	137, 138, 236, 393, 998
BssMI	GATC	6 cut(s)	261, 958, 994, 1303, 1399, 1531
Bst2UI	CCWGG	4 cut(s)	139, 238, 792, 1000
Bst4CI	ACNGT	1 cut(s)	1019
Bst6I	CTCTTC	3 cut(s)	102, 162, 251
BstAFI	CTTAAG	2 cut(s)	704, 1250
BstC8I	GCNNGC	6 cut(s)	412, 499, 673, 1186, 1314, 1619
BstDEI	CTNAG	5 cut(s)	213, 636, 1094, 1145, 1158
BstDSI	CCRYGG	1 cut(s)	393
BstENI	CCTNNNNNAGG	1 cut(s)	270
BstF5I	GGATG	5 cut(s)	466, 544, 748, 1441, 1504
BstH2I	RGCGCY	1 cut(s)	888
BstHHI	GCGC	1 cut(s)	887
BstKTI	GATC	6 cut(s)	264, 961, 997, 1306, 1402, 1534
BstMAI	GTCTC	2 cut(s)	693, 1047
BstMBI	GATC	6 cut(s)	261, 958, 994, 1303, 1399, 1531
BstMWI	GCNNNNNNNGC	1 cut(s)	976
BstNI	CCWGG	4 cut(s)	139, 238, 792, 1000
BstPAI	GACNNNNGTC	1 cut(s)	653
BstSCI	CCNGG	5 cut(s)	137, 236, 790, 998, 1602
BstSFI	CTRYAG	1 cut(s)	651
BstV1I	GCAGC	6 cut(s)	49, 142, 145, 644, 1328, 1424
BstV2I	GAAGAC	1 cut(s)	395
BstX2I	RGATCY	2 cut(s)	261, 994
BstYI	RGATCY	2 cut(s)	261, 994
BsuRI	GGCC	8 cut(s)	501, 612, 1003, 1188, 1230, 1602, 1607, 1617
BtgI	CCRYGG	1 cut(s)	393
BtsCI	GGATG	5 cut(s)	466, 544, 748, 1441, 1504
BtsI	GCAGTG	1 cut(s)	1231
BtsIMutI	CAGTG	3 cut(s)	297, 1215, 1231
Cac8I	GCNNGC	6 cut(s)	412, 499, 673, 1186, 1314, 1619
CfoI	GCGC	1 cut(s)	887
Cfr13I	GGNCC	4 cut(s)	20, 863, 1601, 1615
CseI	GACGC	1 cut(s)	1557
Csp6I	GTAC	2 cut(s)	164, 920
CviAII	CATG	2 cut(s)	554, 971
CviQI	GTAC	2 cut(s)	164, 920
DdeI	CTNAG	5 cut(s)	213, 636, 1094, 1145, 1158
DpnI	GATC	6 cut(s)	263, 960, 996, 1305, 1401, 1533
DpnII	GATC	6 cut(s)	261, 958, 994, 1303, 1399, 1531
DraI	TTTAAA	1 cut(s)	1380
EaeI	YGGCCR	3 cut(s)	610, 1228, 1605
Eam1104I	CTCTTC	3 cut(s)	102, 162, 251
EarI	CTCTTC	3 cut(s)	102, 162, 251
Ecl136II	GAGCTC	2 cut(s)	586, 640
Eco24I	GRGCYC	3 cut(s)	588, 642, 824
Eco31I	GGTCTC	2 cut(s)	693, 1047
Eco47I	GGWCC	2 cut(s)	20, 863
Eco47III	AGCGCT	1 cut(s)	886
Eco53kI	GAGCTC	2 cut(s)	586, 640
Eco57I	CTGAAG	4 cut(s)	1151, 1191, 1615, 1627
Eco88I	CYCGRG	1 cut(s)	146
EcoICRI	GAGCTC	2 cut(s)	586, 640
EcoNI	CCTNNNNNAGG	1 cut(s)	270
EcoO109I	RGGNCCY	1 cut(s)	1615
EcoRII	CCWGG	4 cut(s)	137, 236, 790, 998
EcoT22I	ATGCAT	2 cut(s)	489, 696
EcoT38I	GRGCYC	3 cut(s)	588, 642, 824
FaeI	CATG	2 cut(s)	557, 974
FalI	AAGNNNNNCTT	4 cut(s)	26, 58, 1449, 1481
FaqI	GGGAC	1 cut(s)	363
FatI	CATG	2 cut(s)	553, 970
FauI	CCCGC	1 cut(s)	186
FbaI	TGATCA	1 cut(s)	958
FokI	GGATG	5 cut(s)	473, 551, 755, 1448, 1511
FriOI	GRGCYC	3 cut(s)	588, 642, 824
FspBI	CTAG	7 cut(s)	105, 267, 645, 980, 1005, 1059, 1472
GlaI	GCGC	1 cut(s)	886
GsuI	CTGGAG	2 cut(s)	822, 909
HaeII	RGCGCY	1 cut(s)	888
HaeIII	GGCC	8 cut(s)	501, 612, 1003, 1188, 1230, 1602, 1607, 1617
HapII	CCGG	3 cut(s)	161, 710, 1604
HgaI	GACGC	1 cut(s)	1557
HhaI	GCGC	1 cut(s)	887
Hin1II	CATG	2 cut(s)	557, 974
Hin6I	GCGC	1 cut(s)	885
HinP1I	GCGC	1 cut(s)	885
HindIII	AAGCTT	1 cut(s)	669
HinfI	GANTC	5 cut(s)	92, 149, 475, 895, 1289
HpaII	CCGG	3 cut(s)	161, 710, 1604
HphI	GGTGA	2 cut(s)	593, 986
Hpy166II	GTNNAC	1 cut(s)	804
Hpy188I	TCNGA	9 cut(s)	480, 659, 994, 1015, 1052, 1171, 1294, 1308, 1646
Hpy188III	TCNNGA	8 cut(s)	698, 734, 784, 839, 866, 1204, 1457, 1535
Hpy8I	GTNNAC	1 cut(s)	804
HpyAV	CCTTC	2 cut(s)	758, 1606
HpyCH4III	ACNGT	1 cut(s)	1019
HpyF10VI	GCNNNNNNNGC	1 cut(s)	976
HpyF3I	CTNAG	5 cut(s)	213, 636, 1094, 1145, 1158
Hsp92II	CATG	2 cut(s)	557, 974
HspAI	GCGC	1 cut(s)	885
KpnI	GGTACC	1 cut(s)	923
Ksp22I	TGATCA	1 cut(s)	958
Kzo9I	GATC	6 cut(s)	261, 958, 994, 1303, 1399, 1531
LmnI	GCTCC	5 cut(s)	819, 841, 882, 943, 1274
Lsp1109I	GCAGC	6 cut(s)	49, 142, 145, 644, 1328, 1424
LweI	GCATC	6 cut(s)	496, 529, 703, 733, 1299, 1569
MaeI	CTAG	7 cut(s)	105, 267, 645, 980, 1005, 1059, 1472
MaeIII	GTNAC	1 cut(s)	367
MalI	GATC	6 cut(s)	263, 960, 996, 1305, 1401, 1533
MboI	GATC	6 cut(s)	261, 958, 994, 1303, 1399, 1531
MflI	RGATCY	2 cut(s)	261, 994
MhlI	GDGCHC	3 cut(s)	588, 642, 824
MlsI	TGGCCA	2 cut(s)	612, 1230
MluCI	AATT	9 cut(s)	344, 566, 715, 1109, 1268, 1296, 1355, 1386, 1591
MluNI	TGGCCA	2 cut(s)	612, 1230
MlyI	GAGTC	3 cut(s)	86, 158, 1298
MmeI	TCCRAC	1 cut(s)	637
Mox20I	TGGCCA	2 cut(s)	612, 1230
Mph1103I	ATGCAT	2 cut(s)	489, 696
MroXI	GAANNNNTTC	1 cut(s)	41
MscI	TGGCCA	2 cut(s)	612, 1230
MseI	TTAA	7 cut(s)	705, 753, 911, 1103, 1251, 1379, 1638
MslI	CAYNNNNRTG	2 cut(s)	105, 507
Msp20I	TGGCCA	2 cut(s)	612, 1230
MspA1I	CMGCKG	1 cut(s)	635
MspCI	CTTAAG	2 cut(s)	704, 1250
MspI	CCGG	3 cut(s)	161, 710, 1604
MspR9I	CCNGG	5 cut(s)	139, 238, 792, 1000, 1604
Mva1269I	GAATGC	1 cut(s)	1047
MvaI	CCWGG	4 cut(s)	139, 238, 792, 1000
MwoI	GCNNNNNNNGC	1 cut(s)	976
NciI	CCSGG	1 cut(s)	1604
NdeII	GATC	6 cut(s)	261, 958, 994, 1303, 1399, 1531
NlaIII	CATG	2 cut(s)	557, 974
NlaIV	GGNNCC	7 cut(s)	22, 144, 263, 821, 921, 1021, 1339
NsiI	ATGCAT	2 cut(s)	489, 696
PasI	CCCWGGG	1 cut(s)	138
PctI	GAATGC	1 cut(s)	1047
PdmI	GAANNNNTTC	1 cut(s)	41
PfeI	GAWTC	2 cut(s)	475, 895
PleI	GAGTC	3 cut(s)	86, 157, 1297
PpsI	GAGTC	3 cut(s)	86, 157, 1297
PshAI	GACNNNNGTC	1 cut(s)	653
Psp124BI	GAGCTC	2 cut(s)	588, 642
Psp6I	CCWGG	4 cut(s)	137, 236, 790, 998
PspGI	CCWGG	4 cut(s)	137, 236, 790, 998
PspN4I	GGNNCC	7 cut(s)	22, 144, 263, 821, 921, 1021, 1339
PspPI	GGNCC	4 cut(s)	20, 863, 1601, 1615
PsrI	GAACNNNNNNTAC	2 cut(s)	1485, 1517
PsuI	RGATCY	2 cut(s)	261, 994
PvuII	CAGCTG	1 cut(s)	635
RsaI	GTAC	2 cut(s)	165, 921
RsaNI	GTAC	2 cut(s)	164, 920
RseI	CAYNNNNRTG	2 cut(s)	105, 507
SacI	GAGCTC	2 cut(s)	588, 642
SaqAI	TTAA	7 cut(s)	705, 753, 911, 1103, 1251, 1379, 1638
Sau3AI	GATC	6 cut(s)	261, 958, 994, 1303, 1399, 1531
Sau96I	GGNCC	4 cut(s)	20, 863, 1601, 1615
SchI	GAGTC	3 cut(s)	86, 158, 1298
ScrFI	CCNGG	5 cut(s)	139, 238, 792, 1000, 1604
SduI	GDGCHC	3 cut(s)	588, 642, 824
SfaNI	GCATC	6 cut(s)	496, 529, 703, 733, 1299, 1569
SfcI	CTRYAG	1 cut(s)	651
SinI	GGWCC	2 cut(s)	20, 863
SmiMI	CAYNNNNRTG	2 cut(s)	105, 507
SmlI	CTYRAG	4 cut(s)	704, 1250, 1283, 1455
SmoI	CTYRAG	4 cut(s)	704, 1250, 1283, 1455
SpeI	ACTAGT	1 cut(s)	104
Sse9I	AATT	9 cut(s)	344, 566, 715, 1109, 1268, 1296, 1355, 1386, 1591
SsiI	CCGC	6 cut(s)	179, 245, 248, 1066, 1335, 1364
SspI	AATATT	1 cut(s)	954
SspMI	CTAG	7 cut(s)	105, 267, 645, 980, 1005, 1059, 1472
SstI	GAGCTC	2 cut(s)	588, 642
StyD4I	CCNGG	5 cut(s)	137, 236, 790, 998, 1602
TaaI	ACNGT	1 cut(s)	1019
TaqI	TCGA	4 cut(s)	419, 697, 1509, 1530
TasI	AATT	9 cut(s)	344, 566, 715, 1109, 1268, 1296, 1355, 1386, 1591
TauI	GCSGC	4 cut(s)	247, 250, 1069, 1367
TfiI	GAWTC	2 cut(s)	475, 895
Tru1I	TTAA	7 cut(s)	705, 753, 911, 1103, 1251, 1379, 1638
Tru9I	TTAA	7 cut(s)	705, 753, 911, 1103, 1251, 1379, 1638
TscAI	CASTG	3 cut(s)	297, 1222, 1231
TseI	GCWGC	6 cut(s)	62, 130, 133, 632, 1316, 1412
TspDTI	ATGAA	6 cut(s)	89, 269, 542, 669, 978, 1136
TspGWI	ACGGA	1 cut(s)	956
TspRI	CASTG	3 cut(s)	297, 1222, 1231
Vha464I	CTTAAG	2 cut(s)	704, 1250
VpaK11BI	GGWCC	2 cut(s)	20, 863
XagI	CCTNNNNNAGG	1 cut(s)	270
XapI	RAATTY	5 cut(s)	715, 1268, 1296, 1355, 1591
XmnI	GAANNNNTTC	1 cut(s)	41
XspI	CTAG	7 cut(s)	105, 267, 645, 980, 1005, 1059, 1472
Zsp2I	ATGCAT	2 cut(s)	489, 696

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.