Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002410

Physical Location & Seq

Genomic Coordinates Reverse (-)

23514715 .. 23521611

Gene Structure 6897 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ56126

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGGGAATACTTGTGTTGGACCCAGCATTTCTAAGAATGGCTTCTTCCAATCAGTTTCGGCTGCAATGTGGCGAACCCCTTTGCCTGATGACTCTCTTCATACTAGTGGAGGAGAAACTGCCAATGAGCAGCAGCCCAGGGAACCCGAGTCGCCTCTTCCGGTACAAGACAAGCCCCCGCAACAAGTGATGACCATACCAAAACCTGAAACTGAGCCGAAACAACCCTCCAAACCCAGGAAGCCGCCGCAGATGAAGAGGGTCCCTAGTGCAGGGCTTCGTGCTGGTTCAGTGTTGCAAACAAAGACGGGAAAAATAAAGGAGTTTTATAGTTTTGGGAGGAAATTGGGACAGGGGCAGTTTGGGGTAACAACTCTGTGCGTGGAGAAGGCCACAGGGAAAGAGTATGCGTGCAAGTCGATTGCAAAAAGGAAGTTGATAACTGACGATGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCATCATCTGGCAGGCCACCCTAATGTTATATCTATAAAGGGTGCTTATGAGGATGCTGTTGCAGTTCATGTAGTTATGGAATTATGTGCAGGAGGTGAGCTCTTTGATAGGATTATCCAGCGTGGCCATTATACAGAAAGAAAGGCAGCTGAGCTCACTAGGACTATAGTCGGAGTTGTAGAAGCTTGCCATTCATTAGGAGTTATGCATCGAGACCTTAAGCCCGAGAATTTTCTCTTTGTCAGTCAGGAGGAGGATGCACTTCTTAAAACTATTGATTTTGGATTATCTATTTTCCTGAAGCCAGGAGAAAAGTTTACTGATGTGGTTGGGAGCCCATATTATGTCGCTCCAGAAGTCTTACGAAAGCGTTATGGTCCAGAAGCAGATGTTTGGAGCGCTGGAGTGATTCTTTATATTTTATTAAGTGGGGTACCTCCATTTTGGGCTGAAACGGAGCAGGGAATATTTGATCAGGTCTTGCATGGTGAGCTAGACTTTTCATCAGATCCCTGGCCTAGTATCTCTGACGGTGCCAAAGATTTAGTAAGGAGAATGCTTGTCCGCGACCCTAGAAAGCGGCTGACTGCACACGAAGTTTTGTGCCACCCCTGGGTGCAAGTTGATGGTGTGGCTCCTGATAAGGCTCTTGATTCTGCAGTTCTAAGTCGCTTAAAGCAATTTTCAGCTATGAACAAGCTGAAGAAAATGGCTCTTATGGTTATTGCTGAGAGCTTATCTGAAGAAGAAATAGCTGGCCTGAAAGAAATGTTCAAGATGATAGACACTGACGGCAGTGGCCAAATCACTTTTGAAGAACTTAAGGCTGGACTGAAAAAATTTGGAGCTACTCTCAAGGAGTCAGAAATTTATGATCTGATGCAAGCAGCAGATGTAGATAATAGCGGAACCATTGATTATGGGGAATTTGTTGCTGCAACATTGCATTTAAACAAAATTGAGAGAGAAGATCATCTGTTTGCAGCTTTCTCCTACTTTGATAAGGATGGAAGTGGCTACATTACTCAAGATGAGCTTCAACTAGCTTGTGAGGAGTTTGGCATAGAGGATGTTCGCCTCGAAGAAATGATAAGAGAAGTCGATCAGGATAATGATGGACGCATAGATTACAACGAGTTTGTGGCTATGATGCAAAAAGGAAATTTTGTTGGCCCGGCCAAGAAGGGCCTGCAAAGTAGCTTCAGTATTAACTTCAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005509 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0031090 GO:0031903 GO:0031984 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042175 GO:0042221 GO:0042579 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0046777 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0098588 GO:0098805 GO:0098827 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_6 Pkinase

Protein Analysis

568

Amino Acids

63.24

Weight (kDa)

5.38

Isoelectric Point (pI)

41.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	110 - 368	4.1e-77	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	112 - 362	4.2e-24	Protein tyrosine and serine/threonine kinase
EF-hand_1	PF00036	416 - 443	4.3e-09	EF hand domain
EF-hand_7	PF13499	416 - 475	5.1e-13	EF-hand domain pair
EF-hand_6	PF13405	416 - 444	1.1e-07	EF-hand domain
EF-hand_5	PF13202	416 - 438	1e-06	EF hand
EF-hand_8	PF13833	428 - 476	9.4e-08	EF-hand domain pair
EF-hand_7	PF13499	485 - 547	3.7e-15	EF-hand domain pair
EF-hand_6	PF13405	489 - 516	3.7e-06	EF-hand domain
EF-hand_1	PF00036	522 - 548	7.1e-09	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002410)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10660 AT3G10660 AT5G04870
fragaria_vesca	FvH4_6g20840 FvH4_6g20840 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490
malus_domestica	MD02G1257300.v1.1 MD07G1063300.v1.1 MD12G1044400.v1.1 MD14G1043300.v1.1
prunus_persica	Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.7G090800_v2.0.a1 Prupe.7G090800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0332341 RchiOBHm_Chr3g0464211 RchiOBHm_Chr3g0477181
rosa_laevigata	RLG00000023739 RLG00000029678
rosa_multiflora	Rmu_sc0000932.1_g000001 Rmu_sc0003422.1_g000006
rosa_roxburghii	Rroxscaffold_4G00318280 Rroxscaffold_6G00404350 Rroxscaffold_6G00404850
rosa_rugosa	Rorug01G0100000 Rorug03G0158600
rosa_samantha	Rh1CG118000 Rh1DG129100 Rh3AG208900 Rh3CG236600 Rh3DG235400
rosa_wichuraiana	Rw1G010080 Rw3G019050 Rw3G019440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	919
AccB1I	GGYRCC	2 cut(s)	919, 1019
AccII	CGCG	1 cut(s)	1053
AciI	CCGC	6 cut(s)	179, 245, 248, 1051, 1066, 1392
AclWI	GGATC	1 cut(s)	989
AcoI	YGGCCR	3 cut(s)	610, 1285, 1662
AcsI	RAATTY	5 cut(s)	715, 1325, 1353, 1412, 1648
AcuI	CTGAAG	5 cut(s)	806, 1208, 1248, 1672, 1684
AfaI	GTAC	2 cut(s)	165, 921
AfeI	AGCGCT	1 cut(s)	886
AfiI	CCNNNNNNNGG	3 cut(s)	237, 272, 1099
AflII	CTTAAG	2 cut(s)	704, 1307
AgsI	TTSAA	3 cut(s)	1261, 1301, 1526
AhlI	ACTAGT	1 cut(s)	104
AjnI	CCWGG	5 cut(s)	137, 236, 790, 998, 1097
Alw21I	GWGCWC	2 cut(s)	588, 642
Alw26I	GTCTC	1 cut(s)	693
AlwI	GGATC	1 cut(s)	989
Ama87I	CYCGRG	2 cut(s)	146, 710
Aor51HI	AGCGCT	1 cut(s)	886
AoxI	GGCC	9 cut(s)	390, 499, 610, 1001, 1243, 1285, 1657, 1662, 1672
ApeKI	GCWGC	7 cut(s)	62, 130, 133, 632, 1373, 1421, 1469
ApoI	RAATTY	5 cut(s)	715, 1325, 1353, 1412, 1648
Asp700I	GAANNNNTTC	1 cut(s)	41
Asp718I	GGTACC	1 cut(s)	919
AspLEI	GCGC	1 cut(s)	887
AspS9I	GGNCC	5 cut(s)	20, 262, 863, 1658, 1672
AsuC2I	CCSGG	1 cut(s)	1661
AsuHPI	GGTGA	2 cut(s)	593, 986
AvaI	CYCGRG	2 cut(s)	146, 710
AvaII	GGWCC	3 cut(s)	20, 262, 863
BalI	TGGCCA	2 cut(s)	612, 1287
BanI	GGYRCC	2 cut(s)	919, 1019
BanII	GRGCYC	3 cut(s)	588, 642, 824
Bbv12I	GWGCWC	2 cut(s)	588, 642
BbvI	GCAGC	7 cut(s)	49, 142, 145, 644, 1385, 1408, 1481
BccI	CCATC	3 cut(s)	1106, 1487, 1595
BceAI	ACGGC	1 cut(s)	1294
BciT130I	CCWGG	5 cut(s)	139, 238, 792, 1000, 1099
BclI	TGATCA	1 cut(s)	958
BcnI	CCSGG	1 cut(s)	1661
BcoDI	GTCTC	1 cut(s)	693
BcuI	ACTAGT	1 cut(s)	104
BfaI	CTAG	7 cut(s)	105, 267, 645, 980, 1005, 1059, 1529
BfmI	CTRYAG	2 cut(s)	651, 1143
BfoI	RGCGCY	1 cut(s)	888
BfrI	CTTAAG	2 cut(s)	704, 1307
BlpI	GCTNAGC	1 cut(s)	636
Bme1390I	CCNGG	6 cut(s)	139, 238, 792, 1000, 1099, 1661
Bme18I	GGWCC	3 cut(s)	20, 262, 863
BmeT110I	CYCGRG	2 cut(s)	146, 710
BmgT120I	GGNCC	5 cut(s)	20, 262, 863, 1658, 1672
BmiI	GGNNCC	9 cut(s)	22, 144, 263, 264, 821, 921, 1021, 1122, 1396
BmrFI	CCNGG	6 cut(s)	139, 238, 792, 1000, 1099, 1661
BmsI	GCATC	6 cut(s)	496, 529, 703, 733, 1356, 1626
BoxI	GACNNNNGTC	1 cut(s)	653
BplI	GAGNNNNNCTC	4 cut(s)	570, 602, 1323, 1355
BpmI	CTGGAG	2 cut(s)	822, 909
Bpu1102I	GCTNAGC	1 cut(s)	636
BpuEI	CTTGAG	2 cut(s)	1325, 1497
BpuMI	CCSGG	1 cut(s)	1661
BsaI	GGTCTC	1 cut(s)	693
BsaJI	CCNNGG	6 cut(s)	137, 138, 236, 998, 1097, 1098
BsaWI	WCCGGW	1 cut(s)	160
Bsc4I	CCNNNNNNNGG	3 cut(s)	237, 272, 1099
Bse3DI	GCAATG	2 cut(s)	72, 1427
BseBI	CCWGG	5 cut(s)	139, 238, 792, 1000, 1099
BseDI	CCNNGG	6 cut(s)	137, 138, 236, 998, 1097, 1098
BseGI	GGATG	5 cut(s)	466, 544, 748, 1498, 1561
BseLI	CCNNNNNNNGG	3 cut(s)	237, 272, 1099
BseMI	GCAATG	2 cut(s)	72, 1427
BseMII	CTCAG	3 cut(s)	204, 627, 1206
BseRI	GAGGAG	4 cut(s)	126, 481, 752, 1553
BseXI	GCAGC	7 cut(s)	49, 142, 145, 644, 1385, 1408, 1481
BseYI	CCCAGC	1 cut(s)	23
BsgI	GTGCAG	3 cut(s)	291, 594, 1059
Bsh1236I	CGCG	1 cut(s)	1053
BshFI	GGCC	9 cut(s)	392, 501, 612, 1003, 1245, 1287, 1659, 1664, 1674
BshNI	GGYRCC	2 cut(s)	919, 1019
BsiHKAI	GWGCWC	2 cut(s)	588, 642
BsiHKCI	CYCGRG	2 cut(s)	146, 710
BsiSI	CCGG	2 cut(s)	161, 1661
BslFI	GGGAC	2 cut(s)	248, 363
BslI	CCNNNNNNNGG	3 cut(s)	237, 272, 1099
BsmAI	GTCTC	1 cut(s)	693
BsmFI	GGGAC	2 cut(s)	248, 363
BsmI	GAATGC	1 cut(s)	1047
BsnI	GGCC	9 cut(s)	392, 501, 612, 1003, 1245, 1287, 1659, 1664, 1674
Bso31I	GGTCTC	1 cut(s)	693
BsoBI	CYCGRG	2 cut(s)	146, 710
Bsp1286I	GDGCHC	3 cut(s)	588, 642, 824
Bsp143I	GATC	5 cut(s)	958, 994, 1360, 1456, 1588
Bsp1720I	GCTNAGC	1 cut(s)	636
BspACI	CCGC	6 cut(s)	179, 245, 248, 1051, 1066, 1392
BspANI	GGCC	9 cut(s)	392, 501, 612, 1003, 1245, 1287, 1659, 1664, 1674
BspCNI	CTCAG	3 cut(s)	205, 628, 1207
BspFNI	CGCG	1 cut(s)	1053
BspLI	GGNNCC	9 cut(s)	22, 144, 263, 264, 821, 921, 1021, 1122, 1396
BspMAI	CTGCAG	1 cut(s)	1147
BspPI	GGATC	1 cut(s)	989
BspT107I	GGYRCC	2 cut(s)	919, 1019
BspTI	CTTAAG	2 cut(s)	704, 1307
BspTNI	GGTCTC	1 cut(s)	693
BsrDI	GCAATG	2 cut(s)	72, 1427
BssECI	CCNNGG	6 cut(s)	137, 138, 236, 998, 1097, 1098
BssMI	GATC	5 cut(s)	958, 994, 1360, 1456, 1588
Bst2UI	CCWGG	5 cut(s)	139, 238, 792, 1000, 1099
Bst4CI	ACNGT	1 cut(s)	1019
Bst6I	CTCTTC	3 cut(s)	102, 162, 251
BstAFI	CTTAAG	2 cut(s)	704, 1307
BstC8I	GCNNGC	6 cut(s)	412, 499, 673, 1243, 1371, 1676
BstDEI	CTNAG	5 cut(s)	33, 213, 636, 1151, 1215
BstENI	CCTNNNNNAGG	1 cut(s)	270
BstF5I	GGATG	5 cut(s)	466, 544, 748, 1498, 1561
BstFNI	CGCG	1 cut(s)	1053
BstH2I	RGCGCY	1 cut(s)	888
BstHHI	GCGC	1 cut(s)	887
BstKTI	GATC	5 cut(s)	961, 997, 1363, 1459, 1591
BstMAI	GTCTC	1 cut(s)	693
BstMBI	GATC	5 cut(s)	958, 994, 1360, 1456, 1588
BstMWI	GCNNNNNNNGC	1 cut(s)	976
BstNI	CCWGG	5 cut(s)	139, 238, 792, 1000, 1099
BstPAI	GACNNNNGTC	1 cut(s)	653
BstSCI	CCNGG	6 cut(s)	137, 236, 790, 998, 1097, 1659
BstSFI	CTRYAG	2 cut(s)	651, 1143
BstUI	CGCG	1 cut(s)	1053
BstV1I	GCAGC	7 cut(s)	49, 142, 145, 644, 1385, 1408, 1481
BstX2I	RGATCY	1 cut(s)	994
BstYI	RGATCY	1 cut(s)	994
BsuRI	GGCC	9 cut(s)	392, 501, 612, 1003, 1245, 1287, 1659, 1664, 1674
BtsCI	GGATG	5 cut(s)	466, 544, 748, 1498, 1561
BtsI	GCAGTG	1 cut(s)	1288
BtsIMutI	CAGTG	3 cut(s)	297, 1272, 1288
Cac8I	GCNNGC	6 cut(s)	412, 499, 673, 1243, 1371, 1676
CfoI	GCGC	1 cut(s)	887
Cfr13I	GGNCC	5 cut(s)	20, 262, 863, 1658, 1672
CseI	GACGC	1 cut(s)	1614
Csp6I	GTAC	2 cut(s)	164, 920
CviAII	CATG	2 cut(s)	554, 971
CviQI	GTAC	2 cut(s)	164, 920
DdeI	CTNAG	5 cut(s)	33, 213, 636, 1151, 1215
DpnI	GATC	5 cut(s)	960, 996, 1362, 1458, 1590
DpnII	GATC	5 cut(s)	958, 994, 1360, 1456, 1588
DraI	TTTAAA	1 cut(s)	1437
EaeI	YGGCCR	3 cut(s)	610, 1285, 1662
Eam1104I	CTCTTC	3 cut(s)	102, 162, 251
EarI	CTCTTC	3 cut(s)	102, 162, 251
Ecl136II	GAGCTC	2 cut(s)	586, 640
Eco24I	GRGCYC	3 cut(s)	588, 642, 824
Eco31I	GGTCTC	1 cut(s)	693
Eco47I	GGWCC	3 cut(s)	20, 262, 863
Eco47III	AGCGCT	1 cut(s)	886
Eco53kI	GAGCTC	2 cut(s)	586, 640
Eco57I	CTGAAG	5 cut(s)	806, 1208, 1248, 1672, 1684
Eco88I	CYCGRG	2 cut(s)	146, 710
EcoICRI	GAGCTC	2 cut(s)	586, 640
EcoNI	CCTNNNNNAGG	1 cut(s)	270
EcoO109I	RGGNCCY	2 cut(s)	262, 1672
EcoRII	CCWGG	5 cut(s)	137, 236, 790, 998, 1097
EcoT22I	ATGCAT	2 cut(s)	489, 696
EcoT38I	GRGCYC	3 cut(s)	588, 642, 824
FaeI	CATG	2 cut(s)	557, 974
FalI	AAGNNNNNCTT	4 cut(s)	26, 58, 1506, 1538
FaqI	GGGAC	2 cut(s)	248, 363
FatI	CATG	2 cut(s)	553, 970
FauI	CCCGC	1 cut(s)	186
FbaI	TGATCA	1 cut(s)	958
FokI	GGATG	5 cut(s)	473, 551, 755, 1505, 1568
FriOI	GRGCYC	3 cut(s)	588, 642, 824
FspBI	CTAG	7 cut(s)	105, 267, 645, 980, 1005, 1059, 1529
GlaI	GCGC	1 cut(s)	886
GsaI	CCCAGC	1 cut(s)	27
GsuI	CTGGAG	2 cut(s)	822, 909
HaeII	RGCGCY	1 cut(s)	888
HaeIII	GGCC	9 cut(s)	392, 501, 612, 1003, 1245, 1287, 1659, 1664, 1674
HapII	CCGG	2 cut(s)	161, 1661
HgaI	GACGC	1 cut(s)	1614
HhaI	GCGC	1 cut(s)	887
Hin1II	CATG	2 cut(s)	557, 974
Hin6I	GCGC	1 cut(s)	885
HinP1I	GCGC	1 cut(s)	885
HindIII	AAGCTT	1 cut(s)	669
HinfI	GANTC	6 cut(s)	92, 149, 475, 895, 1139, 1346
HpaII	CCGG	2 cut(s)	161, 1661
HphI	GGTGA	2 cut(s)	593, 986
Hpy166II	GTNNAC	1 cut(s)	804
Hpy188I	TCNGA	8 cut(s)	480, 659, 994, 1015, 1228, 1351, 1365, 1703
Hpy8I	GTNNAC	1 cut(s)	804
HpyAV	CCTTC	2 cut(s)	382, 1663
HpyCH4III	ACNGT	1 cut(s)	1019
HpyF10VI	GCNNNNNNNGC	1 cut(s)	976
HpyF3I	CTNAG	5 cut(s)	33, 213, 636, 1151, 1215
Hsp92II	CATG	2 cut(s)	557, 974
HspAI	GCGC	1 cut(s)	885
KflI	GGGWCCC	1 cut(s)	262
KpnI	GGTACC	1 cut(s)	923
Ksp22I	TGATCA	1 cut(s)	958
Kzo9I	GATC	5 cut(s)	958, 994, 1360, 1456, 1588
LmnI	GCTCC	6 cut(s)	819, 841, 882, 943, 1126, 1331
Lsp1109I	GCAGC	7 cut(s)	49, 142, 145, 644, 1385, 1408, 1481
LweI	GCATC	6 cut(s)	496, 529, 703, 733, 1356, 1626
MaeI	CTAG	7 cut(s)	105, 267, 645, 980, 1005, 1059, 1529
MaeIII	GTNAC	1 cut(s)	367
MalI	GATC	5 cut(s)	960, 996, 1362, 1458, 1590
MboI	GATC	5 cut(s)	958, 994, 1360, 1456, 1588
MflI	RGATCY	1 cut(s)	994
MhlI	GDGCHC	3 cut(s)	588, 642, 824
MlsI	TGGCCA	2 cut(s)	612, 1287
MluCI	AATT	9 cut(s)	344, 566, 715, 1166, 1325, 1353, 1412, 1443, 1648
MluNI	TGGCCA	2 cut(s)	612, 1287
MlyI	GAGTC	3 cut(s)	86, 158, 1355
MmeI	TCCRAC	1 cut(s)	637
Mox20I	TGGCCA	2 cut(s)	612, 1287
Mph1103I	ATGCAT	2 cut(s)	489, 696
MroXI	GAANNNNTTC	1 cut(s)	41
MscI	TGGCCA	2 cut(s)	612, 1287
MseI	TTAA	7 cut(s)	705, 753, 911, 1160, 1308, 1436, 1695
MslI	CAYNNNNRTG	2 cut(s)	105, 507
Msp20I	TGGCCA	2 cut(s)	612, 1287
MspA1I	CMGCKG	1 cut(s)	635
MspCI	CTTAAG	2 cut(s)	704, 1307
MspI	CCGG	2 cut(s)	161, 1661
MspR9I	CCNGG	6 cut(s)	139, 238, 792, 1000, 1099, 1661
Mva1269I	GAATGC	1 cut(s)	1047
MvaI	CCWGG	5 cut(s)	139, 238, 792, 1000, 1099
MvnI	CGCG	1 cut(s)	1053
MwoI	GCNNNNNNNGC	1 cut(s)	976
NciI	CCSGG	1 cut(s)	1661
NdeII	GATC	5 cut(s)	958, 994, 1360, 1456, 1588
NlaIII	CATG	2 cut(s)	557, 974
NlaIV	GGNNCC	9 cut(s)	22, 144, 263, 264, 821, 921, 1021, 1122, 1396
NsiI	ATGCAT	2 cut(s)	489, 696
PasI	CCCWGGG	2 cut(s)	138, 1098
PctI	GAATGC	1 cut(s)	1047
PdmI	GAANNNNTTC	1 cut(s)	41
PfeI	GAWTC	3 cut(s)	475, 895, 1139
PleI	GAGTC	3 cut(s)	86, 157, 1354
PpsI	GAGTC	3 cut(s)	86, 157, 1354
PpuMI	RGGWCCY	1 cut(s)	262
PshAI	GACNNNNGTC	1 cut(s)	653
Psp124BI	GAGCTC	2 cut(s)	588, 642
Psp5II	RGGWCCY	1 cut(s)	262
Psp6I	CCWGG	5 cut(s)	137, 236, 790, 998, 1097
PspFI	CCCAGC	1 cut(s)	23
PspGI	CCWGG	5 cut(s)	137, 236, 790, 998, 1097
PspN4I	GGNNCC	9 cut(s)	22, 144, 263, 264, 821, 921, 1021, 1122, 1396
PspPI	GGNCC	5 cut(s)	20, 262, 863, 1658, 1672
PspPPI	RGGWCCY	1 cut(s)	262
PstI	CTGCAG	1 cut(s)	1147
PsuI	RGATCY	1 cut(s)	994
PvuII	CAGCTG	1 cut(s)	635
RsaI	GTAC	2 cut(s)	165, 921
RsaNI	GTAC	2 cut(s)	164, 920
RseI	CAYNNNNRTG	2 cut(s)	105, 507
SacI	GAGCTC	2 cut(s)	588, 642
SaqAI	TTAA	7 cut(s)	705, 753, 911, 1160, 1308, 1436, 1695
Sau3AI	GATC	5 cut(s)	958, 994, 1360, 1456, 1588
Sau96I	GGNCC	5 cut(s)	20, 262, 863, 1658, 1672
SchI	GAGTC	3 cut(s)	86, 158, 1355
ScrFI	CCNGG	6 cut(s)	139, 238, 792, 1000, 1099, 1661
SduI	GDGCHC	3 cut(s)	588, 642, 824
SfaNI	GCATC	6 cut(s)	496, 529, 703, 733, 1356, 1626
SfcI	CTRYAG	2 cut(s)	651, 1143
SinI	GGWCC	3 cut(s)	20, 262, 863
SmiMI	CAYNNNNRTG	2 cut(s)	105, 507
SmlI	CTYRAG	4 cut(s)	704, 1307, 1340, 1512
SmoI	CTYRAG	4 cut(s)	704, 1307, 1340, 1512
SpeI	ACTAGT	1 cut(s)	104
Sse9I	AATT	9 cut(s)	344, 566, 715, 1166, 1325, 1353, 1412, 1443, 1648
SsiI	CCGC	6 cut(s)	179, 245, 248, 1051, 1066, 1392
SspI	AATATT	1 cut(s)	954
SspMI	CTAG	7 cut(s)	105, 267, 645, 980, 1005, 1059, 1529
SstI	GAGCTC	2 cut(s)	588, 642
StyD4I	CCNGG	6 cut(s)	137, 236, 790, 998, 1097, 1659
TaaI	ACNGT	1 cut(s)	1019
TaqI	TCGA	4 cut(s)	419, 697, 1566, 1587
TasI	AATT	9 cut(s)	344, 566, 715, 1166, 1325, 1353, 1412, 1443, 1648
TauI	GCSGC	3 cut(s)	247, 250, 1069
TfiI	GAWTC	3 cut(s)	475, 895, 1139
Tru1I	TTAA	7 cut(s)	705, 753, 911, 1160, 1308, 1436, 1695
Tru9I	TTAA	7 cut(s)	705, 753, 911, 1160, 1308, 1436, 1695
TscAI	CASTG	3 cut(s)	297, 1279, 1288
TseI	GCWGC	7 cut(s)	62, 130, 133, 632, 1373, 1421, 1469
TspDTI	ATGAA	6 cut(s)	89, 269, 542, 669, 978, 1193
TspGWI	ACGGA	1 cut(s)	956
TspRI	CASTG	3 cut(s)	297, 1279, 1288
Vha464I	CTTAAG	2 cut(s)	704, 1307
VpaK11BI	GGWCC	3 cut(s)	20, 262, 863
XagI	CCTNNNNNAGG	1 cut(s)	270
XapI	RAATTY	5 cut(s)	715, 1325, 1353, 1412, 1648
XmnI	GAANNNNTTC	1 cut(s)	41
XspI	CTAG	7 cut(s)	105, 267, 645, 980, 1005, 1059, 1529
Zsp2I	ATGCAT	2 cut(s)	489, 696

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.