Calcium-dependent protein kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G10660 AT3G10660 AT5G04870 |
| fragaria_vesca | FvH4_6g20840 FvH4_6g20840 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 FvH4_7g05490 |
| malus_domestica | MD02G1257300.v1.1 MD07G1063300.v1.1 MD12G1044400.v1.1 MD14G1043300.v1.1 |
| prunus_persica | Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.2G075100_v2.0.a1 Prupe.7G090800_v2.0.a1 Prupe.7G090800_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0332341 RchiOBHm_Chr3g0464211 RchiOBHm_Chr3g0477181 |
| rosa_laevigata | RLG00000023739 RLG00000029678 |
| rosa_multiflora | Rmu_sc0000932.1_g000001 Rmu_sc0003422.1_g000006 |
| rosa_roxburghii | Rroxscaffold_4G00318280 Rroxscaffold_6G00404350 Rroxscaffold_6G00404850 |
| rosa_rugosa | Rorug01G0100000 Rorug03G0158600 |
| rosa_samantha | Rh1CG118000 Rh1DG129100 Rh3AG208900 Rh3CG236600 Rh3DG235400 |
| rosa_wichuraiana | Rw1G010080 Rw3G019050 Rw3G019440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 498, 1016 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 679 |
| AciI | CCGC | 1 cut(s) | 225 |
| AclI | AACGTT | 1 cut(s) | 368 |
| AclWI | GGATC | 1 cut(s) | 886 |
| AcoI | YGGCCR | 2 cut(s) | 71, 1626 |
| AcsI | RAATTY | 7 cut(s) | 401, 471, 712, 797, 1350, 1409, 1645 |
| AcuI | CTGAAG | 3 cut(s) | 858, 1245, 1669 |
| AfaI | GTAC | 2 cut(s) | 165, 918 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 679, 1096 |
| AflII | CTTAAG | 2 cut(s) | 701, 1304 |
| AgeI | ACCGGT | 2 cut(s) | 78, 281 |
| AgsI | TTSAA | 6 cut(s) | 784, 956, 1258, 1318, 1523, 1565 |
| AjnI | CCWGG | 2 cut(s) | 787, 1094 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 26, 58 |
| Alw21I | GWGCWC | 1 cut(s) | 585 |
| Alw26I | GTCTC | 4 cut(s) | 119, 265, 690, 1044 |
| AlwI | GGATC | 1 cut(s) | 886 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 964 |
| Ama87I | CYCGRG | 1 cut(s) | 1657 |
| AoxI | GGCC | 5 cut(s) | 71, 998, 1240, 1626, 1654 |
| ApeKI | GCWGC | 4 cut(s) | 629, 1370, 1418, 1466 |
| ApoI | RAATTY | 7 cut(s) | 401, 471, 712, 797, 1350, 1409, 1645 |
| AsiGI | ACCGGT | 2 cut(s) | 78, 281 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 41 |
| AspLEI | GCGC | 1 cut(s) | 1605 |
| AspS9I | GGNCC | 5 cut(s) | 20, 279, 860, 961, 1655 |
| AsuC2I | CCSGG | 2 cut(s) | 1658, 1659 |
| AsuHPI | GGTGA | 3 cut(s) | 144, 590, 983 |
| AvaI | CYCGRG | 1 cut(s) | 1657 |
| AvaII | GGWCC | 4 cut(s) | 20, 279, 860, 961 |
| AxyI | CCTNAGG | 1 cut(s) | 138 |
| BaeGI | GKGCMC | 1 cut(s) | 501 |
| BalI | TGGCCA | 2 cut(s) | 73, 1628 |
| BanI | GGYRCC | 2 cut(s) | 498, 1016 |
| BanII | GRGCYC | 1 cut(s) | 585 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1557, 1589 |
| Bbv12I | GWGCWC | 1 cut(s) | 585 |
| BbvI | GCAGC | 4 cut(s) | 641, 1382, 1405, 1478 |
| BccI | CCATC | 5 cut(s) | 1007, 1098, 1103, 1484, 1592 |
| BciT130I | CCWGG | 2 cut(s) | 789, 1096 |
| BclI | TGATCA | 1 cut(s) | 1585 |
| BcnI | CCSGG | 2 cut(s) | 1658, 1659 |
| BcoDI | GTCTC | 4 cut(s) | 119, 265, 690, 1044 |
| BfaI | CTAG | 4 cut(s) | 264, 642, 1002, 1526 |
| BfmI | CTRYAG | 3 cut(s) | 540, 648, 1140 |
| BfrI | CTTAAG | 2 cut(s) | 701, 1304 |
| BisI | GCNGC | 4 cut(s) | 630, 1371, 1419, 1467 |
| BlpI | GCTNAGC | 1 cut(s) | 633 |
| BlsI | GCNGC | 4 cut(s) | 631, 1372, 1420, 1468 |
| Bme1390I | CCNGG | 4 cut(s) | 789, 1096, 1658, 1659 |
| Bme18I | GGWCC | 4 cut(s) | 20, 279, 860, 961 |
| BmeT110I | CYCGRG | 1 cut(s) | 1657 |
| BmgT120I | GGNCC | 5 cut(s) | 20, 279, 860, 961, 1655 |
| BmiI | GGNNCC | 5 cut(s) | 144, 500, 1018, 1119, 1393 |
| BmrFI | CCNGG | 4 cut(s) | 789, 1096, 1658, 1659 |
| BmrI | ACTGGG | 1 cut(s) | 353 |
| BmsI | GCATC | 5 cut(s) | 526, 700, 730, 1029, 1623 |
| BmuI | ACTGGG | 1 cut(s) | 353 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 567, 599, 1320, 1352 |
| BpmI | CTGGAG | 3 cut(s) | 898, 906, 1494 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 633 |
| BpuEI | CTTGAG | 1 cut(s) | 1322 |
| BpuMI | CCSGG | 2 cut(s) | 1658, 1659 |
| Bsa29I | ATCGAT | 1 cut(s) | 416 |
| BsaI | GGTCTC | 3 cut(s) | 265, 690, 1044 |
| BsaJI | CCNNGG | 4 cut(s) | 995, 1094, 1095, 1657 |
| BsaWI | WCCGGW | 2 cut(s) | 78, 281 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1398, 1428 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 679, 1096 |
| Bse118I | RCCGGY | 3 cut(s) | 78, 160, 281 |
| Bse1I | ACTGG | 2 cut(s) | 310, 348 |
| Bse21I | CCTNAGG | 1 cut(s) | 138 |
| Bse3DI | GCAATG | 4 cut(s) | 1179, 1206, 1424, 1689 |
| BseBI | CCWGG | 2 cut(s) | 789, 1096 |
| BseCI | ATCGAT | 1 cut(s) | 416 |
| BseDI | CCNNGG | 4 cut(s) | 995, 1094, 1095, 1657 |
| BseGI | GGATG | 9 cut(s) | 454, 463, 541, 739, 745, 1044, 1090, 1495, 1558 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 679, 1096 |
| BseMI | GCAATG | 4 cut(s) | 1179, 1206, 1424, 1689 |
| BseMII | CTCAG | 4 cut(s) | 108, 138, 624, 1213 |
| BseNI | ACTGG | 2 cut(s) | 310, 348 |
| BseRI | GAGGAG | 3 cut(s) | 478, 737, 1550 |
| BseSI | GKGCMC | 1 cut(s) | 501 |
| BseXI | GCAGC | 4 cut(s) | 641, 1382, 1405, 1478 |
| BsgI | GTGCAG | 3 cut(s) | 288, 591, 1056 |
| Bsh1285I | CGRYCG | 1 cut(s) | 83 |
| BshFI | GGCC | 5 cut(s) | 73, 1000, 1242, 1628, 1656 |
| BshNI | GGYRCC | 2 cut(s) | 498, 1016 |
| BshTI | ACCGGT | 2 cut(s) | 78, 281 |
| BshVI | ATCGAT | 1 cut(s) | 416 |
| BsiEI | CGRYCG | 1 cut(s) | 83 |
| BsiHKAI | GWGCWC | 1 cut(s) | 585 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1657 |
| BsiSI | CCGG | 4 cut(s) | 79, 161, 282, 1658 |
| BslFI | GGGAC | 1 cut(s) | 360 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 679, 1096 |
| BsmAI | GTCTC | 4 cut(s) | 119, 265, 690, 1044 |
| BsmFI | GGGAC | 1 cut(s) | 360 |
| BsnI | GGCC | 5 cut(s) | 73, 1000, 1242, 1628, 1656 |
| Bso31I | GGTCTC | 3 cut(s) | 265, 690, 1044 |
| BsoBI | CYCGRG | 1 cut(s) | 1657 |
| Bsp1286I | GDGCHC | 2 cut(s) | 501, 585 |
| Bsp143I | GATC | 4 cut(s) | 891, 1357, 1453, 1585 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 633 |
| BspACI | CCGC | 1 cut(s) | 225 |
| BspANI | GGCC | 5 cut(s) | 73, 1000, 1242, 1628, 1656 |
| BspCNI | CTCAG | 4 cut(s) | 107, 139, 625, 1212 |
| BspDI | ATCGAT | 1 cut(s) | 416 |
| BspLI | GGNNCC | 5 cut(s) | 144, 500, 1018, 1119, 1393 |
| BspMAI | CTGCAG | 1 cut(s) | 1144 |
| BspPI | GGATC | 1 cut(s) | 886 |
| BspT107I | GGYRCC | 2 cut(s) | 498, 1016 |
| BspTI | CTTAAG | 2 cut(s) | 701, 1304 |
| BspTNI | GGTCTC | 3 cut(s) | 265, 690, 1044 |
| BsrDI | GCAATG | 4 cut(s) | 1179, 1206, 1424, 1689 |
| BsrFI | RCCGGY | 3 cut(s) | 78, 160, 281 |
| BsrI | ACTGG | 2 cut(s) | 310, 348 |
| BssAI | RCCGGY | 3 cut(s) | 78, 160, 281 |
| BssECI | CCNNGG | 4 cut(s) | 995, 1094, 1095, 1657 |
| BssMI | GATC | 4 cut(s) | 891, 1357, 1453, 1585 |
| Bst2UI | CCWGG | 2 cut(s) | 789, 1096 |
| Bst4CI | ACNGT | 3 cut(s) | 329, 1280, 1388 |
| Bst6I | CTCTTC | 1 cut(s) | 248 |
| BstAFI | CTTAAG | 2 cut(s) | 701, 1304 |
| BstC8I | GCNNGC | 5 cut(s) | 409, 670, 1240, 1368, 1673 |
| BstDEI | CTNAG | 6 cut(s) | 94, 138, 147, 633, 1148, 1199 |
| BstDSI | CCRYGG | 1 cut(s) | 995 |
| BstEII | GGTNACC | 1 cut(s) | 971 |
| BstF5I | GGATG | 9 cut(s) | 454, 463, 541, 739, 745, 1044, 1090, 1495, 1558 |
| BstHHI | GCGC | 1 cut(s) | 1605 |
| BstKTI | GATC | 4 cut(s) | 894, 1360, 1456, 1588 |
| BstMAI | GTCTC | 4 cut(s) | 119, 265, 690, 1044 |
| BstMBI | GATC | 4 cut(s) | 891, 1357, 1453, 1585 |
| BstMCI | CGRYCG | 1 cut(s) | 83 |
| BstNI | CCWGG | 2 cut(s) | 789, 1096 |
| BstPI | GGTNACC | 1 cut(s) | 971 |
| BstSCI | CCNGG | 4 cut(s) | 787, 1094, 1656, 1657 |
| BstSFI | CTRYAG | 3 cut(s) | 540, 648, 1140 |
| BstSLI | GKGCMC | 1 cut(s) | 501 |
| BstV1I | GCAGC | 4 cut(s) | 641, 1382, 1405, 1478 |
| Bsu15I | ATCGAT | 1 cut(s) | 416 |
| Bsu36I | CCTNAGG | 1 cut(s) | 138 |
| BsuRI | GGCC | 5 cut(s) | 73, 1000, 1242, 1628, 1656 |
| BsuTUI | ATCGAT | 1 cut(s) | 416 |
| BtgI | CCRYGG | 1 cut(s) | 995 |
| BtsCI | GGATG | 9 cut(s) | 454, 463, 541, 739, 745, 1044, 1090, 1495, 1558 |
| BtsIMutI | CAGTG | 3 cut(s) | 294, 1285, 1393 |
| Cac8I | GCNNGC | 5 cut(s) | 409, 670, 1240, 1368, 1673 |
| CaiI | CAGNNNCTG | 1 cut(s) | 964 |
| CfoI | GCGC | 1 cut(s) | 1605 |
| Cfr10I | RCCGGY | 3 cut(s) | 78, 160, 281 |
| Cfr13I | GGNCC | 5 cut(s) | 20, 279, 860, 961, 1655 |
| Cfr9I | CCCGGG | 1 cut(s) | 1657 |
| ClaI | ATCGAT | 1 cut(s) | 416 |
| CpoI | CGGWCCG | 1 cut(s) | 279 |
| CseI | GACGC | 1 cut(s) | 1277 |
| Csp6I | GTAC | 2 cut(s) | 164, 917 |
| CspAI | ACCGGT | 2 cut(s) | 78, 281 |
| CspI | CGGWCCG | 1 cut(s) | 279 |
| CviAII | CATG | 4 cut(s) | 551, 968, 1076, 1630 |
| CviQI | GTAC | 2 cut(s) | 164, 917 |
| DdeI | CTNAG | 6 cut(s) | 94, 138, 147, 633, 1148, 1199 |
| DpnI | GATC | 4 cut(s) | 893, 1359, 1455, 1587 |
| DpnII | GATC | 4 cut(s) | 891, 1357, 1453, 1585 |
| EaeI | YGGCCR | 2 cut(s) | 71, 1626 |
| Eam1104I | CTCTTC | 1 cut(s) | 248 |
| EarI | CTCTTC | 1 cut(s) | 248 |
| Ecl136II | GAGCTC | 1 cut(s) | 583 |
| Eco24I | GRGCYC | 1 cut(s) | 585 |
| Eco31I | GGTCTC | 3 cut(s) | 265, 690, 1044 |
| Eco47I | GGWCC | 4 cut(s) | 20, 279, 860, 961 |
| Eco53kI | GAGCTC | 1 cut(s) | 583 |
| Eco57I | CTGAAG | 3 cut(s) | 858, 1245, 1669 |
| Eco81I | CCTNAGG | 1 cut(s) | 138 |
| Eco88I | CYCGRG | 1 cut(s) | 1657 |
| Eco91I | GGTNACC | 1 cut(s) | 971 |
| EcoICRI | GAGCTC | 1 cut(s) | 583 |
| EcoO109I | RGGNCCY | 1 cut(s) | 961 |
| EcoO65I | GGTNACC | 1 cut(s) | 971 |
| EcoRI | GAATTC | 1 cut(s) | 1409 |
| EcoRII | CCWGG | 2 cut(s) | 787, 1094 |
| EcoT22I | ATGCAT | 1 cut(s) | 693 |
| EcoT38I | GRGCYC | 1 cut(s) | 585 |
| FaeI | CATG | 4 cut(s) | 554, 971, 1079, 1633 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1655, 1687 |
| FaqI | GGGAC | 1 cut(s) | 360 |
| FatI | CATG | 4 cut(s) | 550, 967, 1075, 1629 |
| FbaI | TGATCA | 1 cut(s) | 1585 |
| Fnu4HI | GCNGC | 4 cut(s) | 630, 1371, 1419, 1467 |
| FokI | GGATG | 9 cut(s) | 461, 470, 548, 746, 752, 1051, 1077, 1502, 1565 |
| FriOI | GRGCYC | 1 cut(s) | 585 |
| Fsp4HI | GCNGC | 4 cut(s) | 630, 1371, 1419, 1467 |
| FspBI | CTAG | 4 cut(s) | 264, 642, 1002, 1526 |
| GlaI | GCGC | 1 cut(s) | 1604 |
| GluI | GCNGC | 4 cut(s) | 630, 1371, 1419, 1467 |
| GsuI | CTGGAG | 3 cut(s) | 898, 906, 1494 |
| HaeIII | GGCC | 5 cut(s) | 73, 1000, 1242, 1628, 1656 |
| HapII | CCGG | 4 cut(s) | 79, 161, 282, 1658 |
| HgaI | GACGC | 1 cut(s) | 1277 |
| HhaI | GCGC | 1 cut(s) | 1605 |
| Hin1II | CATG | 4 cut(s) | 554, 971, 1079, 1633 |
| Hin6I | GCGC | 1 cut(s) | 1603 |
| HinP1I | GCGC | 1 cut(s) | 1603 |
| HindIII | AAGCTT | 1 cut(s) | 666 |
| HinfI | GANTC | 6 cut(s) | 42, 92, 149, 1136, 1203, 1343 |
| HpaII | CCGG | 4 cut(s) | 79, 161, 282, 1658 |
| HphI | GGTGA | 3 cut(s) | 144, 590, 983 |
| Hpy166II | GTNNAC | 2 cut(s) | 100, 917 |
| Hpy188I | TCNGA | 7 cut(s) | 279, 477, 991, 1012, 1202, 1225, 1348 |
| Hpy8I | GTNNAC | 2 cut(s) | 100, 917 |
| HpyAV | CCTTC | 4 cut(s) | 330, 379, 1029, 1660 |
| HpyCH4III | ACNGT | 3 cut(s) | 329, 1280, 1388 |
| HpyCH4IV | ACGT | 1 cut(s) | 368 |
| HpyF3I | CTNAG | 6 cut(s) | 94, 138, 147, 633, 1148, 1199 |
| HpySE526I | ACGT | 1 cut(s) | 368 |
| Hsp92II | CATG | 4 cut(s) | 554, 971, 1079, 1633 |
| HspAI | GCGC | 1 cut(s) | 1603 |
| Ksp22I | TGATCA | 1 cut(s) | 1585 |
| Kzo9I | GATC | 4 cut(s) | 891, 1357, 1453, 1585 |
| LmnI | GCTCC | 2 cut(s) | 1123, 1328 |
| Lsp1109I | GCAGC | 4 cut(s) | 641, 1382, 1405, 1478 |
| LweI | GCATC | 5 cut(s) | 526, 700, 730, 1029, 1623 |
| MaeI | CTAG | 4 cut(s) | 264, 642, 1002, 1526 |
| MaeII | ACGT | 1 cut(s) | 368 |
| MaeIII | GTNAC | 4 cut(s) | 150, 187, 291, 971 |
| MalI | GATC | 4 cut(s) | 893, 1359, 1455, 1587 |
| MboI | GATC | 4 cut(s) | 891, 1357, 1453, 1585 |
| MboII | GAAGA | 7 cut(s) | 37, 122, 265, 1238, 1241, 1463, 1577 |
| MhlI | GDGCHC | 2 cut(s) | 501, 585 |
| MlsI | TGGCCA | 2 cut(s) | 73, 1628 |
| MluNI | TGGCCA | 2 cut(s) | 73, 1628 |
| MlyI | GAGTC | 4 cut(s) | 86, 158, 1212, 1352 |
| MmeI | TCCRAC | 2 cut(s) | 634, 793 |
| Mox20I | TGGCCA | 2 cut(s) | 73, 1628 |
| Mph1103I | ATGCAT | 1 cut(s) | 693 |
| MroXI | GAANNNNTTC | 1 cut(s) | 41 |
| MscI | TGGCCA | 2 cut(s) | 73, 1628 |
| MseI | TTAA | 7 cut(s) | 314, 437, 519, 702, 908, 1157, 1305 |
| MslI | CAYNNNNRTG | 1 cut(s) | 504 |
| Msp20I | TGGCCA | 2 cut(s) | 73, 1628 |
| MspA1I | CMGCKG | 1 cut(s) | 632 |
| MspCI | CTTAAG | 2 cut(s) | 701, 1304 |
| MspI | CCGG | 4 cut(s) | 79, 161, 282, 1658 |
| MspR9I | CCNGG | 4 cut(s) | 789, 1096, 1658, 1659 |
| MvaI | CCWGG | 2 cut(s) | 789, 1096 |
| NciI | CCSGG | 2 cut(s) | 1658, 1659 |
| NdeII | GATC | 4 cut(s) | 891, 1357, 1453, 1585 |
| NlaIII | CATG | 4 cut(s) | 554, 971, 1079, 1633 |
| NlaIV | GGNNCC | 5 cut(s) | 144, 500, 1018, 1119, 1393 |
| NmuCI | GTSAC | 3 cut(s) | 150, 187, 971 |
| NsiI | ATGCAT | 1 cut(s) | 693 |
| PasI | CCCWGGG | 1 cut(s) | 1095 |
| PdmI | GAANNNNTTC | 1 cut(s) | 41 |
| PfeI | GAWTC | 2 cut(s) | 42, 1136 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 679 |
| PinAI | ACCGGT | 2 cut(s) | 78, 281 |
| PkrI | GCNGC | 4 cut(s) | 631, 1372, 1420, 1468 |
| PleI | GAGTC | 4 cut(s) | 86, 157, 1211, 1351 |
| PpsI | GAGTC | 4 cut(s) | 86, 157, 1211, 1351 |
| PpuMI | RGGWCCY | 1 cut(s) | 961 |
| Psp124BI | GAGCTC | 1 cut(s) | 585 |
| Psp1406I | AACGTT | 1 cut(s) | 368 |
| Psp5II | RGGWCCY | 1 cut(s) | 961 |
| Psp6I | CCWGG | 2 cut(s) | 787, 1094 |
| PspEI | GGTNACC | 1 cut(s) | 971 |
| PspGI | CCWGG | 2 cut(s) | 787, 1094 |
| PspN4I | GGNNCC | 5 cut(s) | 144, 500, 1018, 1119, 1393 |
| PspPI | GGNCC | 5 cut(s) | 20, 279, 860, 961, 1655 |
| PspPPI | RGGWCCY | 1 cut(s) | 961 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1539, 1571 |
| PstI | CTGCAG | 1 cut(s) | 1144 |
| PstNI | CAGNNNCTG | 1 cut(s) | 964 |
| PvuII | CAGCTG | 1 cut(s) | 632 |
| RsaI | GTAC | 2 cut(s) | 165, 918 |
| RsaNI | GTAC | 2 cut(s) | 164, 917 |
| RseI | CAYNNNNRTG | 1 cut(s) | 504 |
| Rsr2I | CGGWCCG | 1 cut(s) | 279 |
| RsrII | CGGWCCG | 1 cut(s) | 279 |
| SacI | GAGCTC | 1 cut(s) | 585 |
| SaqAI | TTAA | 7 cut(s) | 314, 437, 519, 702, 908, 1157, 1305 |
| SatI | GCNGC | 4 cut(s) | 630, 1371, 1419, 1467 |
| Sau3AI | GATC | 4 cut(s) | 891, 1357, 1453, 1585 |
| Sau96I | GGNCC | 5 cut(s) | 20, 279, 860, 961, 1655 |
| SchI | GAGTC | 4 cut(s) | 86, 158, 1212, 1352 |
| ScrFI | CCNGG | 4 cut(s) | 789, 1096, 1658, 1659 |
| SduI | GDGCHC | 2 cut(s) | 501, 585 |
| SfaNI | GCATC | 5 cut(s) | 526, 700, 730, 1029, 1623 |
| SfcI | CTRYAG | 3 cut(s) | 540, 648, 1140 |
| SinI | GGWCC | 4 cut(s) | 20, 279, 860, 961 |
| SmaI | CCCGGG | 1 cut(s) | 1659 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 504 |
| SmlI | CTYRAG | 3 cut(s) | 701, 1304, 1337 |
| SmoI | CTYRAG | 3 cut(s) | 701, 1304, 1337 |
| SsiI | CCGC | 1 cut(s) | 225 |
| SspI | AATATT | 1 cut(s) | 951 |
| SspMI | CTAG | 4 cut(s) | 264, 642, 1002, 1526 |
| SstI | GAGCTC | 1 cut(s) | 585 |
| StyD4I | CCNGG | 4 cut(s) | 787, 1094, 1656, 1657 |
| TaaI | ACNGT | 3 cut(s) | 329, 1280, 1388 |
| TaiI | ACGT | 1 cut(s) | 371 |
| TaqI | TCGA | 4 cut(s) | 416, 694, 978, 1048 |
| TaqII | GACCGA | 1 cut(s) | 37 |
| TfiI | GAWTC | 2 cut(s) | 42, 1136 |
| Tru1I | TTAA | 7 cut(s) | 314, 437, 519, 702, 908, 1157, 1305 |
| Tru9I | TTAA | 7 cut(s) | 314, 437, 519, 702, 908, 1157, 1305 |
| TscAI | CASTG | 3 cut(s) | 294, 1285, 1393 |
| TseFI | GTSAC | 3 cut(s) | 150, 187, 971 |
| TseI | GCWGC | 4 cut(s) | 629, 1370, 1418, 1466 |
| Tsp45I | GTSAC | 3 cut(s) | 150, 187, 971 |
| TspDTI | ATGAA | 5 cut(s) | 266, 539, 666, 1092, 1190 |
| TspMI | CCCGGG | 1 cut(s) | 1657 |
| TspRI | CASTG | 3 cut(s) | 294, 1285, 1393 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 679 |
| Vha464I | CTTAAG | 2 cut(s) | 701, 1304 |
| VpaK11BI | GGWCC | 4 cut(s) | 20, 279, 860, 961 |
| XapI | RAATTY | 7 cut(s) | 401, 471, 712, 797, 1350, 1409, 1645 |
| XmaI | CCCGGG | 1 cut(s) | 1657 |
| XmnI | GAANNNNTTC | 1 cut(s) | 41 |
| XspI | CTAG | 4 cut(s) | 264, 642, 1002, 1526 |
| Zsp2I | ATGCAT | 1 cut(s) | 693 |