Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0003871

Physical Location & Seq

Genomic Coordinates Forward (+)

20194563 .. 20198786

Gene Structure 4224 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g26890.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGACATCGTCACTATCGCTCTCCAGGTGGAATATTAATGCCAATGGAGACGATCCTTTTGAGTTTAGTTCCCCGGAATGCTATGCTTGCACTCAGGCGGGTCTTCCGGCGTTTCACTCCAACCGTTGCTCCGCCGGTTCTTCATTGACCCCGACGACTGACCTCAAATGCAACCCTCCTCCAGGTCACCTCTCCCGGACCCGGGTCATCGACCCGCGTAGCAACTACGTGAAAAGGTGGAACCGTCTTGTCCTCATGGCCCGCGGCGTGGCGTTGGCCGTCGATCCGCTCTTCCTCTACGTCATTGCGCTGAGCAGGAGTGGGCCCTGCTTCTACATGGACGTCGCTCTGGCCACCTACGTCACCGTCGTGAGGACGTGTCTTGACGCCTTGCACCTGGCCCACATTGTGCTTCAGTTCAAGCTTGCGTACGTGTCCAGTGAGTCAATGGGGATTGGCTGTGGGAAGCTCGTGTGGGACCCACGGGCGATTGTGTGGCACTACATTGAGTCCTTCAAGGGGTTCTGGCTTGACGCCTTTGTCATTCTACCTATTCCTCAGATTGTGATTTGGCTAATCGAGCCAAAATTGCTTAGAGGAGAACGGCCAACACATATAATGGCCACCGTTTTGCTAACCTTCTTGTTCCAGTTCACCCCGAAGGTCTATCACATTATACACTTGGCCAAAAGACTGAAAAAGGTTACAGGTTACATCTTCTCATATGGCAACATTTGGTGGCGTTTCAAACTTAATGTCATCGCCTACTTAACTGCTTGTCACATTGTTGGAGGAATTTGGTATGTTCTTGCAACACAACGTGTGATGTCATGCATCCAACAACAGTGTGAGAGTAACAAGAAGTGTAATTTCTCTCTCTATTGCTCAAGGGAAATATTTTCCCTTGGAAATTTTCCTGAAGGTAACAGATTCCCAAAGATAAAGGCCTGGTGCTTTGATGAAGACACTGAATTTGGCTACGGAATTTACCAGCCGATTCTTCCTGTCTATATTGGCAATACACGCGCCGTGAGAATCCTTTATCCCATTTACTGGGGTTTAAATAACCTAGGCTCCTTTGGCAACAATCTTACTCCGTCAACTGACTTGCTGGAACTGATATTCTCTTGTTGTTTGTGTCTGACGGGAATGGGCCTCTTTGTTACCTTACTTGGAAATATCCAGATATTTCTGCATTCTATCATGGCAAACAAGAAGAAAATGCAGCTGAAATATCGAGACATGGAATGGTGGATGCATCGTAGACAGTTGCCGCATCATTTAAGAAAGAGAGTTCGACATTTTCAGCGCTGCAGTTGGGCAGCAATGCAAGGACTGGATGAGATTGACTTGATCCAAAACTTTCCTGATGGACTCCGAAGAGATATCAAGCGCCATCTTTGCCTAGATCTTGTCATGAAGGTACCTCTATTCCATAAGTTGGATGATGTTATTCTTGAAAATATATGTGATCTGGTCCGTCCACTAATCTACTCCAAGGGTGAAAAGATAATTAGAGAAGGAGACCCTGTCCAAAGGATGGTGTTCTTAGTTCGTGGACGCGTACAACGCTGTCAAGGGCTTACTAAAGGGTTCTTAGCTACCAGTGTGCTAGAACCCGGTGCCTTCTTCGGAGACGAGCTTCTCTCGTGGTGCCTCCGCCGTCCTTTTCTTGGCCGGCTTCCTTCCTCATCCGCCACATTCACTACCATGGGACCTGTTGAAGCATTTGGTCTCGACGCAGAATTTCTTCGCTACATTTCCGAACATTTTCGGTACAAATTGTCCAGCGAAAACATCAAACGGACGGCGAGGTATTACTCCTCGAATTGGAGGAGTTGGGGGGCTGTCATCATTCAACTTGCTTGGCGTCGTCACAGGGAGAGGACTAAGGGTAGTTCAACACCAATGCAAAACTGGGATATTGAGAGTCGGCTTAAAATGTATGCTGCCATGTTCTTGTCATTCAAGCCTCAGGACCATACAGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005215 GO:0005216 GO:0005217 GO:0005221 GO:0005222 GO:0005242 GO:0005244 GO:0005249 GO:0005261 GO:0005262 GO:0005267 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007263 GO:0008150 GO:0008219 GO:0008324 GO:0009626 GO:0009987 GO:0012501 GO:0015075 GO:0015077 GO:0015079 GO:0015085 GO:0015267 GO:0015276 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0019932 GO:0022803 GO:0022832 GO:0022834 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031224 GO:0031226 GO:0033554 GO:0034050 GO:0034220 GO:0035556 GO:0042391 GO:0043855 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0065008 GO:0070509 GO:0070588 GO:0070838 GO:0071804 GO:0071805 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:0099094

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

664

Amino Acids

76.54

Weight (kDa)

9.42

Isoelectric Point (pI)

50.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
cNMP_binding	PF00027	498 - 585	1.7e-07	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003871)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15410 AT5G15410
fragaria_vesca	FvH4_6g47520 FvH4_6g47520 FvH4_7g26890
malus_domestica	MD07G1248200.v1.1 MD09G1061000.v1.1 MD17G1056400.v1.1
prunus_persica	Prupe.2G272100_v2.0.a1 Prupe.3G259100_v2.0.a1
pyrus_communis	pycom07g22190 pycom111g05130 pycom17g05550
rosa_chinensis	RchiOBHm_Chr1g0373561 RchiOBHm_Chr2g0166581
rosa_laevigata	RLG00000021630 RLG00000026815
rosa_multiflora	Rmu_sc0002860.1_g000003 Rmu_sc0008222.1_g000009
rosa_roxburghii	Rroxscaffold_2G00084740 Rroxscaffold_4G00284140
rosa_rugosa	Rorug01G0378300 Rorug02G0524300 Rorug02G0524400
rosa_samantha	Rh1AG387700 Rh1BG352000 Rh1CG364700 Rh1DG382400 Rh2AG590200 Rh2BG602300 Rh2CG573000 Rh2DG612900
rosa_wichuraiana	Rw1G034770 Rw2G049200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	539
AatII	GACGTC	1 cut(s)	345
Acc65I	GGTACC	1 cut(s)	1423
AccB1I	GGYRCC	3 cut(s)	1423, 1622, 1653
AccB7I	CCANNNNNTGG	3 cut(s)	1053, 1441, 1540
AccBSI	CCGCTC	1 cut(s)	289
AccI	GTMKAC	1 cut(s)	1264
AccII	CGCG	4 cut(s)	217, 264, 1026, 1563
AciI	CCGC	9 cut(s)	98, 132, 215, 262, 264, 287, 1274, 1660, 1695
AclWI	GGATC	3 cut(s)	47, 278, 1348
AcoI	YGGCCR	6 cut(s)	276, 351, 605, 621, 684, 1675
AcsI	RAATTY	5 cut(s)	795, 910, 971, 984, 1745
AcuI	CTGAAG	2 cut(s)	398, 939
AcyI	GRCGYC	4 cut(s)	342, 387, 534, 1870
AdeI	CACNNNGTG	2 cut(s)	409, 821
AfaI	GTAC	4 cut(s)	431, 1425, 1566, 1778
AfeI	AGCGCT	1 cut(s)	1310
AflIII	ACRYGT	4 cut(s)	377, 432, 820, 1561
AgsI	TTSAA	8 cut(s)	421, 517, 748, 1460, 1724, 1859, 1902, 1969
AjiI	CACGTC	1 cut(s)	378
AjnI	CCWGG	4 cut(s)	23, 181, 396, 947
AleI	CACNNNNGTG	1 cut(s)	368
AluBI	AGCT	5 cut(s)	424, 469, 1228, 1601, 1642
AluI	AGCT	5 cut(s)	424, 469, 1228, 1601, 1642
Alw26I	GTCTC	5 cut(s)	42, 1233, 1518, 1629, 1739
AlwI	GGATC	3 cut(s)	47, 278, 1348
Ama87I	CYCGRG	1 cut(s)	201
Aor51HI	AGCGCT	1 cut(s)	1310
ApaI	GGGCCC	1 cut(s)	327
ApeKI	GCWGC	4 cut(s)	1225, 1311, 1322, 1949
ApoI	RAATTY	5 cut(s)	795, 910, 971, 984, 1745
ArsI	GACNNNNNNTTYG	6 cut(s)	41, 73, 741, 773, 956, 988
AseI	ATTAAT	1 cut(s)	36
Asp700I	GAANNNNTTC	2 cut(s)	1749, 1770
Asp718I	GGTACC	1 cut(s)	1423
AspA2I	CCTAGG	1 cut(s)	1069
AspLEI	GCGC	4 cut(s)	310, 1028, 1311, 1395
AsuC2I	CCSGG	5 cut(s)	74, 196, 202, 203, 1620
AsuHPI	GGTGA	4 cut(s)	179, 355, 646, 1514
AvaI	CYCGRG	1 cut(s)	201
AvaII	GGWCC	5 cut(s)	198, 478, 1477, 1715, 1978
AvrII	CCTAGG	1 cut(s)	1069
AxyI	CCTNAGG	1 cut(s)	1974
BaeGI	GKGCMC	1 cut(s)	327
BalI	TGGCCA	3 cut(s)	353, 623, 686
BanI	GGYRCC	3 cut(s)	1423, 1622, 1653
BanII	GRGCYC	1 cut(s)	327
BauI	CACGAG	2 cut(s)	470, 1648
BbsI	GAAGAC	2 cut(s)	95, 969
BbvI	GCAGC	4 cut(s)	1237, 1298, 1334, 1936
BccI	CCATC	3 cut(s)	1364, 1404, 1534
BceAI	ACGGC	5 cut(s)	263, 620, 1013, 1647, 1824
BciT130I	CCWGG	4 cut(s)	25, 183, 398, 949
BcnI	CCSGG	5 cut(s)	74, 196, 202, 203, 1620
BcoDI	GTCTC	5 cut(s)	42, 1233, 1518, 1629, 1739
BfaI	CTAG	4 cut(s)	1070, 1406, 1613, 1990
BfmI	CTRYAG	1 cut(s)	1312
BfoI	RGCGCY	2 cut(s)	1312, 1396
BglII	AGATCT	1 cut(s)	1408
BisI	GCNGC	6 cut(s)	265, 1226, 1274, 1312, 1323, 1950
BlnI	CCTAGG	1 cut(s)	1069
BlpI	GCTNAGC	1 cut(s)	311
BlsI	GCNGC	6 cut(s)	266, 1227, 1275, 1313, 1324, 1951
Bme1390I	CCNGG	9 cut(s)	25, 74, 183, 196, 202, 203, 398, 949, 1620
Bme18I	GGWCC	5 cut(s)	198, 478, 1477, 1715, 1978
BmeT110I	CYCGRG	1 cut(s)	201
BmgBI	CACGTC	1 cut(s)	378
BmrFI	CCNGG	9 cut(s)	25, 74, 183, 196, 202, 203, 398, 949, 1620
BmrI	ACTGGG	2 cut(s)	1063, 1927
BmsI	GCATC	4 cut(s)	843, 1245, 1267, 1285
BmuI	ACTGGG	2 cut(s)	1063, 1927
BoxI	GACNNNNGTC	1 cut(s)	203
BpiI	GAAGAC	2 cut(s)	95, 969
BplI	GAGNNNNNCTC	2 cut(s)	1631, 1663
BpmI	CTGGAG	2 cut(s)	7, 165
Bpu1102I	GCTNAGC	1 cut(s)	311
BpuEI	CTTGAG	1 cut(s)	871
BpuMI	CCSGG	5 cut(s)	74, 196, 202, 203, 1620
BsaAI	YACGTR	2 cut(s)	229, 433
BsaHI	GRCGYC	4 cut(s)	342, 387, 534, 1870
BsaI	GGTCTC	2 cut(s)	1518, 1739
BsaJI	CCNNGG	8 cut(s)	72, 201, 262, 482, 904, 1069, 1497, 1710
BsaXI	ACNNNNNCTCC	6 cut(s)	113, 143, 1058, 1088, 1515, 1545
Bse118I	RCCGGY	2 cut(s)	134, 1677
Bse1I	ACTGG	6 cut(s)	438, 649, 1058, 1341, 1605, 1922
Bse21I	CCTNAGG	1 cut(s)	1974
Bse3DI	GCAATG	2 cut(s)	303, 1332
BseBI	CCWGG	4 cut(s)	25, 183, 398, 949
BseDI	CCNNGG	8 cut(s)	72, 201, 262, 482, 904, 1069, 1497, 1710
BseGI	GGATG	6 cut(s)	834, 1260, 1345, 1450, 1545, 1691
BseMI	GCAATG	2 cut(s)	303, 1332
BseMII	CTCAG	4 cut(s)	107, 302, 572, 1988
BseNI	ACTGG	6 cut(s)	438, 649, 1058, 1341, 1605, 1922
BseRI	GAGGAG	4 cut(s)	168, 612, 1813, 1849
BseSI	GKGCMC	1 cut(s)	327
BseXI	GCAGC	4 cut(s)	1237, 1298, 1334, 1936
Bsh1236I	CGCG	4 cut(s)	217, 264, 1026, 1563
BshNI	GGYRCC	3 cut(s)	1423, 1622, 1653
BsiHKCI	CYCGRG	1 cut(s)	201
BsiSI	CCGG	7 cut(s)	74, 107, 135, 196, 202, 1620, 1678
BsiWI	CGTACG	1 cut(s)	429
BslFI	GGGAC	2 cut(s)	491, 1728
BsmAI	GTCTC	5 cut(s)	42, 1233, 1518, 1629, 1739
BsmBI	CGTCTC	2 cut(s)	42, 1629
BsmFI	GGGAC	2 cut(s)	491, 1728
BsmI	GAATGC	2 cut(s)	83, 1195
Bso31I	GGTCTC	2 cut(s)	1518, 1739
BsoBI	CYCGRG	1 cut(s)	201
Bsp120I	GGGCCC	1 cut(s)	323
Bsp1286I	GDGCHC	1 cut(s)	327
Bsp143I	GATC	5 cut(s)	52, 283, 1353, 1408, 1471
Bsp1720I	GCTNAGC	1 cut(s)	311
Bsp19I	CCATGG	1 cut(s)	1710
BspACI	CCGC	9 cut(s)	98, 132, 215, 262, 264, 287, 1274, 1660, 1695
BspCNI	CTCAG	4 cut(s)	106, 303, 571, 1987
BspFNI	CGCG	4 cut(s)	217, 264, 1026, 1563
BspHI	TCATGA	1 cut(s)	1416
BspMAI	CTGCAG	1 cut(s)	1316
BspPI	GGATC	3 cut(s)	47, 278, 1348
BspQI	GCTCTTC	1 cut(s)	296
BspT107I	GGYRCC	3 cut(s)	1423, 1622, 1653
BspTNI	GGTCTC	2 cut(s)	1518, 1739
BsrBI	CCGCTC	1 cut(s)	289
BsrDI	GCAATG	2 cut(s)	303, 1332
BsrFI	RCCGGY	2 cut(s)	134, 1677
BsrI	ACTGG	6 cut(s)	438, 649, 1058, 1341, 1605, 1922
BssAI	RCCGGY	2 cut(s)	134, 1677
BssECI	CCNNGG	8 cut(s)	72, 201, 262, 482, 904, 1069, 1497, 1710
BssMI	GATC	5 cut(s)	52, 283, 1353, 1408, 1471
BssNI	GRCGYC	4 cut(s)	342, 387, 534, 1870
BssSI	CACGAG	2 cut(s)	470, 1648
BssT1I	CCWWGG	4 cut(s)	904, 1069, 1497, 1710
Bst2BI	CACGAG	2 cut(s)	470, 1648
Bst2UI	CCWGG	4 cut(s)	25, 183, 398, 949
Bst4CI	ACNGT	6 cut(s)	125, 245, 367, 628, 846, 1269
Bst6I	CTCTTC	2 cut(s)	296, 1375
BstACI	GRCGYC	4 cut(s)	342, 387, 534, 1870
BstBAI	YACGTR	2 cut(s)	229, 433
BstC8I	GCNNGC	4 cut(s)	88, 262, 426, 1679
BstDEI	CTNAG	8 cut(s)	93, 311, 558, 593, 1549, 1597, 1890, 1974
BstDSI	CCRYGG	3 cut(s)	262, 482, 1710
BstEII	GGTNACC	1 cut(s)	185
BstENI	CCTNNNNNAGG	1 cut(s)	180
BstF5I	GGATG	6 cut(s)	834, 1260, 1345, 1450, 1545, 1691
BstFNI	CGCG	4 cut(s)	217, 264, 1026, 1563
BstH2I	RGCGCY	2 cut(s)	1312, 1396
BstHHI	GCGC	4 cut(s)	310, 1028, 1311, 1395
BstKTI	GATC	5 cut(s)	55, 286, 1356, 1411, 1474
BstMAI	GTCTC	5 cut(s)	42, 1233, 1518, 1629, 1739
BstMBI	GATC	5 cut(s)	52, 283, 1353, 1408, 1471
BstMWI	GCNNNNNNNGC	7 cut(s)	87, 580, 589, 1023, 1080, 1401, 1569
BstNI	CCWGG	4 cut(s)	25, 183, 398, 949
BstPAI	GACNNNNGTC	1 cut(s)	203
BstPI	GGTNACC	1 cut(s)	185
BstSCI	CCNGG	9 cut(s)	23, 72, 181, 194, 200, 201, 396, 947, 1618
BstSFI	CTRYAG	1 cut(s)	1312
BstSLI	GKGCMC	1 cut(s)	327
BstUI	CGCG	4 cut(s)	217, 264, 1026, 1563
BstV1I	GCAGC	4 cut(s)	1237, 1298, 1334, 1936
BstV2I	GAAGAC	2 cut(s)	95, 969
BstX2I	RGATCY	1 cut(s)	1408
BstYI	RGATCY	1 cut(s)	1408
Bsu36I	CCTNAGG	1 cut(s)	1974
BtgI	CCRYGG	3 cut(s)	262, 482, 1710
BtgZI	GCGATG	1 cut(s)	745
BtrI	CACGTC	1 cut(s)	378
BtsCI	GGATG	6 cut(s)	834, 1260, 1345, 1450, 1545, 1691
BtsIMutI	CAGTG	4 cut(s)	445, 851, 966, 1612
Cac8I	GCNNGC	4 cut(s)	88, 262, 426, 1679
CciI	TCATGA	1 cut(s)	1416
CfoI	GCGC	4 cut(s)	310, 1028, 1311, 1395
Cfr10I	RCCGGY	2 cut(s)	134, 1677
Cfr42I	CCGCGG	1 cut(s)	265
Cfr9I	CCCGGG	1 cut(s)	201
CseI	GACGC	5 cut(s)	395, 542, 1569, 1748, 1859
Csp6I	GTAC	4 cut(s)	430, 1424, 1565, 1777
CviAII	CATG	8 cut(s)	256, 337, 831, 1204, 1243, 1417, 1711, 1954
CviQI	GTAC	4 cut(s)	430, 1424, 1565, 1777
DdeI	CTNAG	8 cut(s)	93, 311, 558, 593, 1549, 1597, 1890, 1974
DpnI	GATC	5 cut(s)	54, 285, 1355, 1410, 1473
DpnII	GATC	5 cut(s)	52, 283, 1353, 1408, 1471
DraI	TTTAAA	1 cut(s)	1062
DraIII	CACNNNGTG	2 cut(s)	409, 821
DrdI	GACNNNNNNGTC	1 cut(s)	539
DseDI	GACNNNNNNGTC	1 cut(s)	539
EaeI	YGGCCR	6 cut(s)	276, 351, 605, 621, 684, 1675
Eam1104I	CTCTTC	2 cut(s)	296, 1375
EarI	CTCTTC	2 cut(s)	296, 1375
EciI	GGCGGA	3 cut(s)	121, 1649, 1684
Eco130I	CCWWGG	4 cut(s)	904, 1069, 1497, 1710
Eco147I	AGGCCT	1 cut(s)	947
Eco24I	GRGCYC	1 cut(s)	327
Eco31I	GGTCTC	2 cut(s)	1518, 1739
Eco32I	GATATC	1 cut(s)	1387
Eco47I	GGWCC	5 cut(s)	198, 478, 1477, 1715, 1978
Eco47III	AGCGCT	1 cut(s)	1310
Eco57I	CTGAAG	2 cut(s)	398, 939
Eco81I	CCTNAGG	1 cut(s)	1974
Eco88I	CYCGRG	1 cut(s)	201
Eco91I	GGTNACC	1 cut(s)	185
EcoNI	CCTNNNNNAGG	1 cut(s)	180
EcoO109I	RGGNCCY	3 cut(s)	324, 478, 1715
EcoO65I	GGTNACC	1 cut(s)	185
EcoRII	CCWGG	4 cut(s)	23, 181, 396, 947
EcoRV	GATATC	1 cut(s)	1387
EcoT14I	CCWWGG	4 cut(s)	904, 1069, 1497, 1710
EcoT22I	ATGCAT	2 cut(s)	836, 1260
EcoT38I	GRGCYC	1 cut(s)	327
ErhI	CCWWGG	4 cut(s)	904, 1069, 1497, 1710
Esp3I	CGTCTC	2 cut(s)	42, 1629
FaeI	CATG	8 cut(s)	259, 340, 834, 1207, 1246, 1420, 1714, 1957
FaqI	GGGAC	2 cut(s)	491, 1728
FatI	CATG	8 cut(s)	255, 336, 830, 1203, 1242, 1416, 1710, 1953
FauI	CCCGC	3 cut(s)	91, 222, 269
FauNDI	CATATG	1 cut(s)	724
FblI	GTMKAC	1 cut(s)	1264
Fnu4HI	GCNGC	6 cut(s)	265, 1226, 1274, 1312, 1323, 1950
FokI	GGATG	6 cut(s)	821, 1267, 1352, 1457, 1552, 1678
FriOI	GRGCYC	1 cut(s)	327
Fsp4HI	GCNGC	6 cut(s)	265, 1226, 1274, 1312, 1323, 1950
FspBI	CTAG	4 cut(s)	1070, 1406, 1613, 1990
GlaI	GCGC	4 cut(s)	309, 1027, 1310, 1394
GluI	GCNGC	6 cut(s)	265, 1226, 1274, 1312, 1323, 1950
GsuI	CTGGAG	2 cut(s)	7, 165
HaeII	RGCGCY	2 cut(s)	1312, 1396
HapII	CCGG	7 cut(s)	74, 107, 135, 196, 202, 1620, 1678
HgaI	GACGC	5 cut(s)	395, 542, 1569, 1748, 1859
HhaI	GCGC	4 cut(s)	310, 1028, 1311, 1395
Hin1I	GRCGYC	4 cut(s)	342, 387, 534, 1870
Hin1II	CATG	8 cut(s)	259, 340, 834, 1207, 1246, 1420, 1714, 1957
Hin6I	GCGC	4 cut(s)	308, 1026, 1309, 1393
HinP1I	GCGC	4 cut(s)	308, 1026, 1309, 1393
HincII	GTYRAC	1 cut(s)	1101
HindII	GTYRAC	1 cut(s)	1101
HindIII	AAGCTT	1 cut(s)	422
HinfI	GANTC	7 cut(s)	443, 509, 930, 997, 1035, 1374, 1930
HpaII	CCGG	7 cut(s)	74, 107, 135, 196, 202, 1620, 1678
HphI	GGTGA	4 cut(s)	179, 355, 646, 1514
Hpy166II	GTNNAC	5 cut(s)	654, 1101, 1265, 1484, 1559
Hpy188I	TCNGA	5 cut(s)	561, 1143, 1379, 1634, 1765
Hpy8I	GTNNAC	5 cut(s)	654, 1101, 1265, 1484, 1559
Hpy99I	CGWCG	6 cut(s)	157, 284, 347, 371, 1742, 1875
HpyAV	CCTTC	8 cut(s)	523, 649, 655, 914, 1414, 1514, 1636, 1695
HpyCH4III	ACNGT	6 cut(s)	125, 245, 367, 628, 846, 1269
HpyCH4IV	ACGT	7 cut(s)	228, 300, 342, 360, 377, 432, 820
HpyF10VI	GCNNNNNNNGC	7 cut(s)	87, 580, 589, 1023, 1080, 1401, 1569
HpyF3I	CTNAG	8 cut(s)	93, 311, 558, 593, 1549, 1597, 1890, 1974
HpySE526I	ACGT	7 cut(s)	228, 300, 342, 360, 377, 432, 820
Hsp92I	GRCGYC	4 cut(s)	342, 387, 534, 1870
Hsp92II	CATG	8 cut(s)	259, 340, 834, 1207, 1246, 1420, 1714, 1957
HspAI	GCGC	4 cut(s)	308, 1026, 1309, 1393
KflI	GGGWCCC	1 cut(s)	478
KpnI	GGTACC	1 cut(s)	1427
KroI	GCCGGC	1 cut(s)	1677
KroNI	GCCGGC	1 cut(s)	1679
KspI	CCGCGG	1 cut(s)	265
Kzo9I	GATC	5 cut(s)	52, 283, 1353, 1408, 1471
LguI	GCTCTTC	1 cut(s)	296
LmnI	GCTCC	2 cut(s)	134, 1079
Lsp1109I	GCAGC	4 cut(s)	1237, 1298, 1334, 1936
LweI	GCATC	4 cut(s)	843, 1245, 1267, 1285
MaeI	CTAG	4 cut(s)	1070, 1406, 1613, 1990
MaeII	ACGT	7 cut(s)	228, 300, 342, 360, 377, 432, 820
MalI	GATC	5 cut(s)	54, 285, 1355, 1410, 1473
MbiI	CCGCTC	1 cut(s)	289
MboI	GATC	5 cut(s)	52, 283, 1353, 1408, 1471
MflI	RGATCY	1 cut(s)	1408
MhlI	GDGCHC	1 cut(s)	327
MlsI	TGGCCA	3 cut(s)	353, 623, 686
MluI	ACGCGT	1 cut(s)	1561
MluNI	TGGCCA	3 cut(s)	353, 623, 686
MlyI	GAGTC	4 cut(s)	452, 518, 1368, 1939
MmeI	TCCRAC	4 cut(s)	144, 769, 862, 1422
Mox20I	TGGCCA	3 cut(s)	353, 623, 686
Mph1103I	ATGCAT	2 cut(s)	836, 1260
MroNI	GCCGGC	1 cut(s)	1677
MroXI	GAANNNNTTC	2 cut(s)	1749, 1770
MscI	TGGCCA	3 cut(s)	353, 623, 686
MseI	TTAA	6 cut(s)	36, 753, 770, 1061, 1283, 1938
MslI	CAYNNNNRTG	2 cut(s)	368, 1709
Msp20I	TGGCCA	3 cut(s)	353, 623, 686
MspA1I	CMGCKG	2 cut(s)	264, 1228
MspI	CCGG	7 cut(s)	74, 107, 135, 196, 202, 1620, 1678
MspR9I	CCNGG	9 cut(s)	25, 74, 183, 196, 202, 203, 398, 949, 1620
Mva1269I	GAATGC	2 cut(s)	83, 1195
MvaI	CCWGG	4 cut(s)	25, 183, 398, 949
MvnI	CGCG	4 cut(s)	217, 264, 1026, 1563
MwoI	GCNNNNNNNGC	7 cut(s)	87, 580, 589, 1023, 1080, 1401, 1569
NaeI	GCCGGC	1 cut(s)	1679
NciI	CCSGG	5 cut(s)	74, 196, 202, 203, 1620
NcoI	CCATGG	1 cut(s)	1710
NdeI	CATATG	1 cut(s)	724
NdeII	GATC	5 cut(s)	52, 283, 1353, 1408, 1471
NgoMIV	GCCGGC	1 cut(s)	1677
NlaIII	CATG	8 cut(s)	259, 340, 834, 1207, 1246, 1420, 1714, 1957
NmuCI	GTSAC	5 cut(s)	9, 185, 361, 779, 1874
NsiI	ATGCAT	2 cut(s)	836, 1260
OliI	CACNNNNGTG	1 cut(s)	368
PagI	TCATGA	1 cut(s)	1416
PceI	AGGCCT	1 cut(s)	947
PciSI	GCTCTTC	1 cut(s)	296
PcsI	WCGNNNNNNNCGW	1 cut(s)	366
PctI	GAATGC	2 cut(s)	83, 1195
PdiI	GCCGGC	1 cut(s)	1679
PdmI	GAANNNNTTC	2 cut(s)	1749, 1770
PfeI	GAWTC	3 cut(s)	930, 997, 1035
Pfl23II	CGTACG	1 cut(s)	429
PflFI	GACNNNGTC	2 cut(s)	7, 1529
PflMI	CCANNNNNTGG	3 cut(s)	1053, 1441, 1540
PfoI	TCCNGGA	1 cut(s)	194
PkrI	GCNGC	6 cut(s)	266, 1227, 1275, 1313, 1324, 1951
PleI	GAGTC	4 cut(s)	451, 517, 1368, 1938
PpsI	GAGTC	4 cut(s)	451, 517, 1368, 1938
Ppu21I	YACGTR	2 cut(s)	229, 433
PpuMI	RGGWCCY	2 cut(s)	478, 1715
PshAI	GACNNNNGTC	1 cut(s)	203
PshBI	ATTAAT	1 cut(s)	36
Psp5II	RGGWCCY	2 cut(s)	478, 1715
Psp6I	CCWGG	4 cut(s)	23, 181, 396, 947
PspEI	GGTNACC	1 cut(s)	185
PspGI	CCWGG	4 cut(s)	23, 181, 396, 947
PspLI	CGTACG	1 cut(s)	429
PspOMI	GGGCCC	1 cut(s)	323
PspPPI	RGGWCCY	2 cut(s)	478, 1715
PstI	CTGCAG	1 cut(s)	1316
PsuI	RGATCY	1 cut(s)	1408
PsyI	GACNNNGTC	2 cut(s)	7, 1529
PvuII	CAGCTG	1 cut(s)	1228
RsaI	GTAC	4 cut(s)	431, 1425, 1566, 1778
RsaNI	GTAC	4 cut(s)	430, 1424, 1565, 1777
RseI	CAYNNNNRTG	2 cut(s)	368, 1709
SacII	CCGCGG	1 cut(s)	265
SapI	GCTCTTC	1 cut(s)	296
SaqAI	TTAA	6 cut(s)	36, 753, 770, 1061, 1283, 1938
SatI	GCNGC	6 cut(s)	265, 1226, 1274, 1312, 1323, 1950
Sau3AI	GATC	5 cut(s)	52, 283, 1353, 1408, 1471
SchI	GAGTC	4 cut(s)	452, 518, 1368, 1939
ScrFI	CCNGG	9 cut(s)	25, 74, 183, 196, 202, 203, 398, 949, 1620
SduI	GDGCHC	1 cut(s)	327
SfaNI	GCATC	4 cut(s)	843, 1245, 1267, 1285
SfcI	CTRYAG	1 cut(s)	1312
Sfr303I	CCGCGG	1 cut(s)	265
SgrBI	CCGCGG	1 cut(s)	265
SinI	GGWCC	5 cut(s)	198, 478, 1477, 1715, 1978
SmaI	CCCGGG	1 cut(s)	203
SmiMI	CAYNNNNRTG	2 cut(s)	368, 1709
SmlI	CTYRAG	1 cut(s)	886
SmoI	CTYRAG	1 cut(s)	886
SseBI	AGGCCT	1 cut(s)	947
SsiI	CCGC	9 cut(s)	98, 132, 215, 262, 264, 287, 1274, 1660, 1695
SspI	AATATT	2 cut(s)	34, 897
SspMI	CTAG	4 cut(s)	1070, 1406, 1613, 1990
StuI	AGGCCT	1 cut(s)	947
StyD4I	CCNGG	9 cut(s)	23, 72, 181, 194, 200, 201, 396, 947, 1618
StyI	CCWWGG	4 cut(s)	904, 1069, 1497, 1710
TaaI	ACNGT	6 cut(s)	125, 245, 367, 628, 846, 1269
TaiI	ACGT	7 cut(s)	231, 303, 345, 363, 380, 435, 823
TaqI	TCGA	7 cut(s)	210, 282, 579, 1237, 1297, 1737, 1826
TauI	GCSGC	2 cut(s)	267, 1276
TfiI	GAWTC	3 cut(s)	930, 997, 1035
Tru1I	TTAA	6 cut(s)	36, 753, 770, 1061, 1283, 1938
Tru9I	TTAA	6 cut(s)	36, 753, 770, 1061, 1283, 1938
TscAI	CASTG	4 cut(s)	445, 851, 973, 1612
TseFI	GTSAC	5 cut(s)	9, 185, 361, 779, 1874
TseI	GCWGC	4 cut(s)	1225, 1311, 1322, 1949
Tsp45I	GTSAC	5 cut(s)	9, 185, 361, 779, 1874
TspDTI	ATGAA	3 cut(s)	132, 975, 1433
TspGWI	ACGGA	4 cut(s)	996, 1086, 1469, 1819
TspMI	CCCGGG	1 cut(s)	201
TspRI	CASTG	4 cut(s)	445, 851, 973, 1612
Tth111I	GACNNNGTC	2 cut(s)	7, 1529
Van91I	CCANNNNNTGG	3 cut(s)	1053, 1441, 1540
VpaK11BI	GGWCC	5 cut(s)	198, 478, 1477, 1715, 1978
VspI	ATTAAT	1 cut(s)	36
XagI	CCTNNNNNAGG	1 cut(s)	180
XapI	RAATTY	5 cut(s)	795, 910, 971, 984, 1745
XcmI	CCANNNNNNNNNTGG	2 cut(s)	445, 1914
XmaI	CCCGGG	1 cut(s)	201
XmaJI	CCTAGG	1 cut(s)	1069
XmiI	GTMKAC	1 cut(s)	1264
XmnI	GAANNNNTTC	2 cut(s)	1749, 1770
XspI	CTAG	4 cut(s)	1070, 1406, 1613, 1990
ZraI	GACGTC	1 cut(s)	343
Zsp2I	ATGCAT	2 cut(s)	836, 1260

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.