Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002860.1

Orthogroup ID

OG0003871

Physical Location & Seq

Genomic Coordinates Reverse (-)

11268 .. 13169

Gene Structure 1902 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002860.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1116 bp

atgtcgtcaccatcgcactccaggtggaataatggcaacggagacgactcgtttgagtttagttccccggaatgctatgcttgcactcaggcgggtcttccggtgtttcactccacccgctgccgtgacccgatccaccattcccagctgcaatgggagcgctccgccggttcttctttgacccgggtggagaccccgacggacctcaaatgcagccccaccgatctgacccggacccgggtcatcgacccccgtagcaactacgtgaaaaggttgaaccgtgtcgtcctcatggcacgtggcctggcggtagccgtggatccgctcttcctctacgtcatcgctttgagcaagagtggggcctcctgcttctacatggacgtcaccctggccttctacgtgaccgtcgttcgcacgtgtctggacgccttacacgtggcccacattttgcttcagttcaagcttgcatacgtgtccagtgagtcgatggtgattggctgcgggaagctcgtgtgggacccgcgagagattgcgtggcactacatgaagtccttcaggcggttttggcttgacgtctttgtcattctacctattcctcagattgtaatttggctaattgagccaaaattgcttagaggagaacggccgacacagataatggtgaccgttttgctaaccttcttgttccagttcacccccaaggtctaccacattattcacttggccaaaagactaaaaaaggtcacaggttacatcttctcatatggcaacatttggtggcgtttcaaacttaatgtcatcgcctacttaactgcgtgtcacattgttggaggaatttggtatgttcttgcaacacaacgtgtaatgtcatgcatccaagaacagtgtgagagtattaaaaagtgtaatctatctctctattgctcaagggcaatattttcccatggaaattttcctgaagttaaaaaaattccaaagataaaggcaatgtgctttgatgaggacactgaatttggctacggaatttaccagccgatccttcttgtctataatggcaatacacgtgccgttaggatcctttatcccatttactggggtttaaataacctagggtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005215 GO:0005216 GO:0005217 GO:0005221 GO:0005222 GO:0005242 GO:0005244 GO:0005249 GO:0005261 GO:0005262 GO:0005267 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006816 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007263 GO:0008150 GO:0008219 GO:0008324 GO:0009626 GO:0009987 GO:0012501 GO:0015075 GO:0015077 GO:0015079 GO:0015085 GO:0015267 GO:0015276 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0019932 GO:0022803 GO:0022832 GO:0022834 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0031224 GO:0031226 GO:0033554 GO:0034050 GO:0034220 GO:0035556 GO:0042391 GO:0043855 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0065008 GO:0070509 GO:0070588 GO:0070838 GO:0071804 GO:0071805 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:0099094

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

371

Amino Acids

42.65

Weight (kDa)

9.26

Isoelectric Point (pI)

50.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003871)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15410 AT5G15410
fragaria_vesca	FvH4_6g47520 FvH4_6g47520 FvH4_7g26890
malus_domestica	MD07G1248200.v1.1 MD09G1061000.v1.1 MD17G1056400.v1.1
prunus_persica	Prupe.2G272100_v2.0.a1 Prupe.3G259100_v2.0.a1
pyrus_communis	pycom07g22190 pycom111g05130 pycom17g05550
rosa_chinensis	RchiOBHm_Chr1g0373561 RchiOBHm_Chr2g0166581
rosa_laevigata	RLG00000021630 RLG00000026815
rosa_multiflora	Rmu_sc0002860.1_g000003 Rmu_sc0008222.1_g000009
rosa_roxburghii	Rroxscaffold_2G00084740 Rroxscaffold_4G00284140
rosa_rugosa	Rorug01G0378300 Rorug02G0524300 Rorug02G0524400
rosa_samantha	Rh1AG387700 Rh1BG352000 Rh1CG364700 Rh1DG382400 Rh2AG590200 Rh2BG602300 Rh2CG573000 Rh2DG612900
rosa_wichuraiana	Rw1G034770 Rw2G049200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	578
AatII	GACGTC	2 cut(s)	384, 576
AccB7I	CCANNNNNTGG	1 cut(s)	1092
AccBSI	CCGCTC	1 cut(s)	325
AccI	GTMKAC	1 cut(s)	705
AccII	CGCG	1 cut(s)	523
AciI	CCGC	8 cut(s)	92, 118, 165, 308, 323, 501, 521, 559
AclWI	GGATC	6 cut(s)	127, 314, 327, 1030, 1069, 1082
AcoI	YGGCCR	2 cut(s)	644, 723
AcsI	RAATTY	5 cut(s)	834, 949, 969, 1010, 1023
AcuI	CTGAAG	3 cut(s)	437, 538, 978
AcvI	CACGTG	4 cut(s)	299, 417, 436, 1064
AcyI	GRCGYC	3 cut(s)	381, 426, 573
AdeI	CACNNNGTG	1 cut(s)	860
AfeI	AGCGCT	1 cut(s)	161
AfiI	CCNNNNNNNGG	4 cut(s)	237, 238, 558, 1092
AflIII	ACRYGT	5 cut(s)	416, 433, 471, 859, 1061
AgsI	TTSAA	3 cut(s)	277, 460, 787
AjnI	CCWGG	3 cut(s)	20, 303, 387
AluBI	AGCT	3 cut(s)	148, 463, 508
AluI	AGCT	3 cut(s)	148, 463, 508
Alw26I	GTCTC	2 cut(s)	36, 185
AlwI	GGATC	6 cut(s)	127, 314, 327, 1030, 1069, 1082
Ama87I	CYCGRG	2 cut(s)	183, 237
Aor51HI	AGCGCT	1 cut(s)	161
AoxI	GGCC	6 cut(s)	301, 360, 390, 438, 644, 723
ApeKI	GCWGC	4 cut(s)	120, 148, 213, 498
ApoI	RAATTY	5 cut(s)	834, 949, 969, 1010, 1023
ArsI	GACNNNNNNTTYG	6 cut(s)	35, 67, 780, 812, 995, 1027
Asp700I	GAANNNNTTC	1 cut(s)	551
AspA2I	CCTAGG	1 cut(s)	1108
AspLEI	GCGC	1 cut(s)	162
AspS9I	GGNCC	5 cut(s)	202, 234, 360, 439, 517
AsuC2I	CCSGG	6 cut(s)	68, 184, 185, 232, 238, 239
AsuHPI	GGTGA	4 cut(s)	376, 502, 673, 685
AvaI	CYCGRG	2 cut(s)	183, 237
AvaII	GGWCC	3 cut(s)	202, 234, 517
AvrII	CCTAGG	1 cut(s)	1108
BalI	TGGCCA	1 cut(s)	725
BamHI	GGATCC	2 cut(s)	319, 1074
BauI	CACGAG	1 cut(s)	509
BbrPI	CACGTG	4 cut(s)	299, 417, 436, 1064
BbsI	GAAGAC	1 cut(s)	89
BbvI	GCAGC	4 cut(s)	107, 135, 225, 485
BccI	CCATC	2 cut(s)	19, 481
BceAI	ACGGC	4 cut(s)	108, 299, 659, 1052
BciT130I	CCWGG	3 cut(s)	22, 305, 389
BcnI	CCSGG	6 cut(s)	68, 184, 185, 232, 238, 239
BcoDI	GTCTC	2 cut(s)	36, 185
BfaI	CTAG	1 cut(s)	1109
BfoI	RGCGCY	1 cut(s)	163
BisI	GCNGC	4 cut(s)	121, 149, 214, 499
BlnI	CCTAGG	1 cut(s)	1108
BlsI	GCNGC	4 cut(s)	122, 150, 215, 500
Bme1390I	CCNGG	9 cut(s)	22, 68, 184, 185, 232, 238, 239, 305, 389
Bme18I	GGWCC	3 cut(s)	202, 234, 517
BmeT110I	CYCGRG	2 cut(s)	183, 237
BmgT120I	GGNCC	5 cut(s)	202, 234, 360, 439, 517
BmiI	GGNNCC	6 cut(s)	236, 321, 361, 518, 519, 1076
BmrFI	CCNGG	9 cut(s)	22, 68, 184, 185, 232, 238, 239, 305, 389
BmrI	ACTGGG	1 cut(s)	1102
BmsI	GCATC	1 cut(s)	882
BmuI	ACTGGG	1 cut(s)	1102
BoxI	GACNNNNGTC	1 cut(s)	239
BpiI	GAAGAC	1 cut(s)	89
BpmI	CTGGAG	1 cut(s)	4
BpuEI	CTTGAG	1 cut(s)	910
BpuMI	CCSGG	6 cut(s)	68, 184, 185, 232, 238, 239
BsaAI	YACGTR	7 cut(s)	265, 299, 400, 417, 436, 472, 1064
BsaHI	GRCGYC	3 cut(s)	381, 426, 573
BsaI	GGTCTC	1 cut(s)	185
BsaJI	CCNNGG	8 cut(s)	66, 183, 237, 315, 387, 699, 943, 1108
BsaWI	WCCGGW	1 cut(s)	100
Bsc4I	CCNNNNNNNGG	4 cut(s)	237, 238, 558, 1092
Bse118I	RCCGGY	1 cut(s)	167
Bse1I	ACTGG	3 cut(s)	477, 688, 1097
Bse3DI	GCAATG	2 cut(s)	158, 993
BseBI	CCWGG	3 cut(s)	22, 305, 389
BseDI	CCNNGG	8 cut(s)	66, 183, 237, 315, 387, 699, 943, 1108
BseGI	GGATG	1 cut(s)	873
BseLI	CCNNNNNNNGG	4 cut(s)	237, 238, 558, 1092
BseMI	GCAATG	2 cut(s)	158, 993
BseMII	CTCAG	2 cut(s)	101, 611
BseNI	ACTGG	3 cut(s)	477, 688, 1097
BseRI	GAGGAG	1 cut(s)	651
BseX3I	CGGCCG	1 cut(s)	644
BseXI	GCAGC	4 cut(s)	107, 135, 225, 485
BseYI	CCCAGC	1 cut(s)	144
Bsh1236I	CGCG	1 cut(s)	523
Bsh1285I	CGRYCG	1 cut(s)	647
BshFI	GGCC	6 cut(s)	303, 362, 392, 440, 646, 725
BsiEI	CGRYCG	1 cut(s)	647
BsiHKCI	CYCGRG	2 cut(s)	183, 237
BsiSI	CCGG	6 cut(s)	68, 101, 168, 184, 232, 238
BslFI	GGGAC	1 cut(s)	530
BslI	CCNNNNNNNGG	4 cut(s)	237, 238, 558, 1092
BsmAI	GTCTC	2 cut(s)	36, 185
BsmBI	CGTCTC	1 cut(s)	36
BsmFI	GGGAC	1 cut(s)	530
BsmI	GAATGC	1 cut(s)	77
BsnI	GGCC	6 cut(s)	303, 362, 392, 440, 646, 725
Bso31I	GGTCTC	1 cut(s)	185
BsoBI	CYCGRG	2 cut(s)	183, 237
Bsp143I	GATC	5 cut(s)	132, 223, 319, 1035, 1074
Bsp19I	CCATGG	1 cut(s)	943
BspACI	CCGC	8 cut(s)	92, 118, 165, 308, 323, 501, 521, 559
BspANI	GGCC	6 cut(s)	303, 362, 392, 440, 646, 725
BspCNI	CTCAG	2 cut(s)	100, 610
BspFNI	CGCG	1 cut(s)	523
BspLI	GGNNCC	6 cut(s)	236, 321, 361, 518, 519, 1076
BspPI	GGATC	6 cut(s)	127, 314, 327, 1030, 1069, 1082
BspQI	GCTCTTC	1 cut(s)	332
BspTNI	GGTCTC	1 cut(s)	185
BsrBI	CCGCTC	1 cut(s)	325
BsrDI	GCAATG	2 cut(s)	158, 993
BsrFI	RCCGGY	1 cut(s)	167
BsrI	ACTGG	3 cut(s)	477, 688, 1097
BssAI	RCCGGY	1 cut(s)	167
BssECI	CCNNGG	8 cut(s)	66, 183, 237, 315, 387, 699, 943, 1108
BssMI	GATC	5 cut(s)	132, 223, 319, 1035, 1074
BssNI	GRCGYC	3 cut(s)	381, 426, 573
BssSI	CACGAG	1 cut(s)	509
BssT1I	CCWWGG	3 cut(s)	699, 943, 1108
Bst2BI	CACGAG	1 cut(s)	509
Bst2UI	CCWGG	3 cut(s)	22, 305, 389
Bst4CI	ACNGT	4 cut(s)	281, 406, 667, 885
Bst6I	CTCTTC	1 cut(s)	332
BstACI	GRCGYC	3 cut(s)	381, 426, 573
BstBAI	YACGTR	7 cut(s)	265, 299, 400, 417, 436, 472, 1064
BstC8I	GCNNGC	2 cut(s)	82, 465
BstDEI	CTNAG	3 cut(s)	87, 597, 632
BstDSI	CCRYGG	2 cut(s)	315, 943
BstEII	GGTNACC	1 cut(s)	661
BstF5I	GGATG	1 cut(s)	873
BstFNI	CGCG	1 cut(s)	523
BstH2I	RGCGCY	1 cut(s)	163
BstHHI	GCGC	1 cut(s)	162
BstKTI	GATC	5 cut(s)	135, 226, 322, 1038, 1077
BstMAI	GTCTC	2 cut(s)	36, 185
BstMBI	GATC	5 cut(s)	132, 223, 319, 1035, 1074
BstMCI	CGRYCG	1 cut(s)	647
BstMWI	GCNNNNNNNGC	5 cut(s)	81, 157, 565, 619, 628
BstNI	CCWGG	3 cut(s)	22, 305, 389
BstPAI	GACNNNNGTC	1 cut(s)	239
BstPI	GGTNACC	1 cut(s)	661
BstSCI	CCNGG	9 cut(s)	20, 66, 182, 183, 230, 236, 237, 303, 387
BstUI	CGCG	1 cut(s)	523
BstV1I	GCAGC	4 cut(s)	107, 135, 225, 485
BstV2I	GAAGAC	1 cut(s)	89
BstX2I	RGATCY	2 cut(s)	319, 1074
BstYI	RGATCY	2 cut(s)	319, 1074
BstZI	CGGCCG	1 cut(s)	644
BsuRI	GGCC	6 cut(s)	303, 362, 392, 440, 646, 725
BtgI	CCRYGG	2 cut(s)	315, 943
BtgZI	GCGATG	2 cut(s)	325, 784
BtsCI	GGATG	1 cut(s)	873
BtsIMutI	CAGTG	3 cut(s)	484, 890, 1005
Cac8I	GCNNGC	2 cut(s)	82, 465
CfoI	GCGC	1 cut(s)	162
Cfr10I	RCCGGY	1 cut(s)	167
Cfr13I	GGNCC	5 cut(s)	202, 234, 360, 439, 517
Cfr9I	CCCGGG	2 cut(s)	183, 237
CseI	GACGC	1 cut(s)	434
CviAII	CATG	5 cut(s)	292, 376, 544, 870, 944
DdeI	CTNAG	3 cut(s)	87, 597, 632
DpnI	GATC	5 cut(s)	134, 225, 321, 1037, 1076
DpnII	GATC	5 cut(s)	132, 223, 319, 1035, 1074
DraI	TTTAAA	1 cut(s)	1101
DraIII	CACNNNGTG	1 cut(s)	860
DrdI	GACNNNNNNGTC	1 cut(s)	578
DseDI	GACNNNNNNGTC	1 cut(s)	578
EaeI	YGGCCR	2 cut(s)	644, 723
EagI	CGGCCG	1 cut(s)	644
Eam1104I	CTCTTC	1 cut(s)	332
EarI	CTCTTC	1 cut(s)	332
EciI	GGCGGA	1 cut(s)	154
EclXI	CGGCCG	1 cut(s)	644
Eco130I	CCWWGG	3 cut(s)	699, 943, 1108
Eco31I	GGTCTC	1 cut(s)	185
Eco47I	GGWCC	3 cut(s)	202, 234, 517
Eco47III	AGCGCT	1 cut(s)	161
Eco52I	CGGCCG	1 cut(s)	644
Eco57I	CTGAAG	3 cut(s)	437, 538, 978
Eco72I	CACGTG	4 cut(s)	299, 417, 436, 1064
Eco88I	CYCGRG	2 cut(s)	183, 237
Eco91I	GGTNACC	1 cut(s)	661
EcoO109I	RGGNCCY	2 cut(s)	360, 517
EcoO65I	GGTNACC	1 cut(s)	661
EcoRII	CCWGG	3 cut(s)	20, 303, 387
EcoT14I	CCWWGG	3 cut(s)	699, 943, 1108
EcoT22I	ATGCAT	1 cut(s)	875
ErhI	CCWWGG	3 cut(s)	699, 943, 1108
Esp3I	CGTCTC	1 cut(s)	36
FaeI	CATG	5 cut(s)	295, 379, 547, 873, 947
FaqI	GGGAC	1 cut(s)	530
FatI	CATG	5 cut(s)	291, 375, 543, 869, 943
FauI	CCCGC	4 cut(s)	85, 125, 494, 528
FauNDI	CATATG	1 cut(s)	763
FblI	GTMKAC	1 cut(s)	705
Fnu4HI	GCNGC	4 cut(s)	121, 149, 214, 499
FokI	GGATG	1 cut(s)	860
Fsp4HI	GCNGC	4 cut(s)	121, 149, 214, 499
FspBI	CTAG	1 cut(s)	1109
GlaI	GCGC	1 cut(s)	161
GluI	GCNGC	4 cut(s)	121, 149, 214, 499
GsaI	CCCAGC	1 cut(s)	148
GsuI	CTGGAG	1 cut(s)	4
HaeII	RGCGCY	1 cut(s)	163
HaeIII	GGCC	6 cut(s)	303, 362, 392, 440, 646, 725
HapII	CCGG	6 cut(s)	68, 101, 168, 184, 232, 238
HgaI	GACGC	1 cut(s)	434
HhaI	GCGC	1 cut(s)	162
Hin1I	GRCGYC	3 cut(s)	381, 426, 573
Hin1II	CATG	5 cut(s)	295, 379, 547, 873, 947
Hin6I	GCGC	1 cut(s)	160
HinP1I	GCGC	1 cut(s)	160
HindIII	AAGCTT	1 cut(s)	461
HinfI	GANTC	2 cut(s)	47, 482
HpaII	CCGG	6 cut(s)	68, 101, 168, 184, 232, 238
HphI	GGTGA	4 cut(s)	376, 502, 673, 685
Hpy166II	GTNNAC	2 cut(s)	693, 706
Hpy188I	TCNGA	2 cut(s)	228, 600
Hpy188III	TCNNGA	2 cut(s)	422, 956
Hpy8I	GTNNAC	2 cut(s)	693, 706
Hpy99I	CGWCG	2 cut(s)	202, 410
HpyAV	CCTTC	4 cut(s)	403, 562, 688, 1049
HpyCH4III	ACNGT	4 cut(s)	281, 406, 667, 885
HpyCH4V	TGCA	6 cut(s)	84, 151, 213, 467, 851, 873
HpyF10VI	GCNNNNNNNGC	5 cut(s)	81, 157, 565, 619, 628
HpyF3I	CTNAG	3 cut(s)	87, 597, 632
Hsp92I	GRCGYC	3 cut(s)	381, 426, 573
Hsp92II	CATG	5 cut(s)	295, 379, 547, 873, 947
HspAI	GCGC	1 cut(s)	160
KflI	GGGWCCC	1 cut(s)	517
Kzo9I	GATC	5 cut(s)	132, 223, 319, 1035, 1074
LguI	GCTCTTC	1 cut(s)	332
LmnI	GCTCC	2 cut(s)	157, 167
Lsp1109I	GCAGC	4 cut(s)	107, 135, 225, 485
LweI	GCATC	1 cut(s)	882
MaeI	CTAG	1 cut(s)	1109
MaeIII	GTNAC	8 cut(s)	6, 125, 382, 400, 661, 742, 749, 818
MalI	GATC	5 cut(s)	134, 225, 321, 1037, 1076
MbiI	CCGCTC	1 cut(s)	325
MboI	GATC	5 cut(s)	132, 223, 319, 1035, 1074
MboII	GAAGA	4 cut(s)	89, 165, 319, 748
MflI	RGATCY	2 cut(s)	319, 1074
MlsI	TGGCCA	1 cut(s)	725
MluCI	AATT	8 cut(s)	606, 615, 626, 834, 949, 969, 1010, 1023
MluNI	TGGCCA	1 cut(s)	725
MlyI	GAGTC	2 cut(s)	41, 491
MmeI	TCCRAC	1 cut(s)	808
MnlI	CCTC	8 cut(s)	215, 299, 341, 373, 606, 629, 824, 994
Mox20I	TGGCCA	1 cut(s)	725
Mph1103I	ATGCAT	1 cut(s)	875
MroXI	GAANNNNTTC	1 cut(s)	551
MscI	TGGCCA	1 cut(s)	725
MseI	TTAA	5 cut(s)	792, 809, 897, 963, 1100
Msp20I	TGGCCA	1 cut(s)	725
MspA1I	CMGCKG	2 cut(s)	120, 148
MspI	CCGG	6 cut(s)	68, 101, 168, 184, 232, 238
MspR9I	CCNGG	9 cut(s)	22, 68, 184, 185, 232, 238, 239, 305, 389
Mva1269I	GAATGC	1 cut(s)	77
MvaI	CCWGG	3 cut(s)	22, 305, 389
MvnI	CGCG	1 cut(s)	523
MwoI	GCNNNNNNNGC	5 cut(s)	81, 157, 565, 619, 628
NciI	CCSGG	6 cut(s)	68, 184, 185, 232, 238, 239
NcoI	CCATGG	1 cut(s)	943
NdeI	CATATG	1 cut(s)	763
NdeII	GATC	5 cut(s)	132, 223, 319, 1035, 1074
NlaIII	CATG	5 cut(s)	295, 379, 547, 873, 947
NlaIV	GGNNCC	6 cut(s)	236, 321, 361, 518, 519, 1076
NmuCI	GTSAC	7 cut(s)	6, 125, 382, 400, 661, 742, 818
NsiI	ATGCAT	1 cut(s)	875
PciSI	GCTCTTC	1 cut(s)	332
PcsI	WCGNNNNNNNCGW	2 cut(s)	405, 432
PctI	GAATGC	1 cut(s)	77
PdmI	GAANNNNTTC	1 cut(s)	551
PflMI	CCANNNNNTGG	1 cut(s)	1092
PkrI	GCNGC	4 cut(s)	122, 150, 215, 500
PleI	GAGTC	2 cut(s)	41, 490
PmaCI	CACGTG	4 cut(s)	299, 417, 436, 1064
PmlI	CACGTG	4 cut(s)	299, 417, 436, 1064
PpsI	GAGTC	2 cut(s)	41, 490
Ppu21I	YACGTR	7 cut(s)	265, 299, 400, 417, 436, 472, 1064
PpuMI	RGGWCCY	1 cut(s)	517
PshAI	GACNNNNGTC	1 cut(s)	239
Psp5II	RGGWCCY	1 cut(s)	517
Psp6I	CCWGG	3 cut(s)	20, 303, 387
PspCI	CACGTG	4 cut(s)	299, 417, 436, 1064
PspEI	GGTNACC	1 cut(s)	661
PspFI	CCCAGC	1 cut(s)	144
PspGI	CCWGG	3 cut(s)	20, 303, 387
PspN4I	GGNNCC	6 cut(s)	236, 321, 361, 518, 519, 1076
PspPI	GGNCC	5 cut(s)	202, 234, 360, 439, 517
PspPPI	RGGWCCY	1 cut(s)	517
PsuI	RGATCY	2 cut(s)	319, 1074
PvuII	CAGCTG	1 cut(s)	148
SapI	GCTCTTC	1 cut(s)	332
SaqAI	TTAA	5 cut(s)	792, 809, 897, 963, 1100
SatI	GCNGC	4 cut(s)	121, 149, 214, 499
Sau3AI	GATC	5 cut(s)	132, 223, 319, 1035, 1074
Sau96I	GGNCC	5 cut(s)	202, 234, 360, 439, 517
SchI	GAGTC	2 cut(s)	41, 491
ScrFI	CCNGG	9 cut(s)	22, 68, 184, 185, 232, 238, 239, 305, 389
SfaNI	GCATC	1 cut(s)	882
SinI	GGWCC	3 cut(s)	202, 234, 517
SmaI	CCCGGG	2 cut(s)	185, 239
SmlI	CTYRAG	1 cut(s)	925
SmoI	CTYRAG	1 cut(s)	925
Sse9I	AATT	8 cut(s)	606, 615, 626, 834, 949, 969, 1010, 1023
SsiI	CCGC	8 cut(s)	92, 118, 165, 308, 323, 501, 521, 559
SspI	AATATT	1 cut(s)	936
SspMI	CTAG	1 cut(s)	1109
StyD4I	CCNGG	9 cut(s)	20, 66, 182, 183, 230, 236, 237, 303, 387
StyI	CCWWGG	3 cut(s)	699, 943, 1108
TaaI	ACNGT	4 cut(s)	281, 406, 667, 885
TaqI	TCGA	2 cut(s)	246, 485
TasI	AATT	8 cut(s)	606, 615, 626, 834, 949, 969, 1010, 1023
Tru1I	TTAA	5 cut(s)	792, 809, 897, 963, 1100
Tru9I	TTAA	5 cut(s)	792, 809, 897, 963, 1100
TscAI	CASTG	3 cut(s)	484, 890, 1012
TseFI	GTSAC	7 cut(s)	6, 125, 382, 400, 661, 742, 818
TseI	GCWGC	4 cut(s)	120, 148, 213, 498
Tsp45I	GTSAC	7 cut(s)	6, 125, 382, 400, 661, 742, 818
TspDTI	ATGAA	1 cut(s)	560
TspGWI	ACGGA	3 cut(s)	54, 215, 1035
TspMI	CCCGGG	2 cut(s)	183, 237
TspRI	CASTG	3 cut(s)	484, 890, 1012
Van91I	CCANNNNNTGG	1 cut(s)	1092
VpaK11BI	GGWCC	3 cut(s)	202, 234, 517
XapI	RAATTY	5 cut(s)	834, 949, 969, 1010, 1023
XcmI	CCANNNNNNNNNTGG	1 cut(s)	484
XmaI	CCCGGG	2 cut(s)	183, 237
XmaJI	CCTAGG	1 cut(s)	1108
XmiI	GTMKAC	1 cut(s)	705
XmnI	GAANNNNTTC	1 cut(s)	551
XspI	CTAG	1 cut(s)	1109
ZraI	GACGTC	2 cut(s)	382, 574
Zsp2I	ATGCAT	1 cut(s)	875

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.