MD01G1184400.v1.1

DNA photolyase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0005426
Physical Location & Seq
Reverse (-)
28371587 .. 28376250
4664 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1184400.v1.1.491

Sequence Viewer

Length: 2109 bp
ATGGCCTCGCTCGTCACTTTCCTGCACTTCCCTTCGCTTTCCTCCTCCCCAAACACCTTCTGCATCTCGCCAAAACGGTGCCGTCTCCATTTCAAGGCTCAGATTTCAGTCAACGGCACTCAGAAGCCGGCCGGCGTAGCCGTCGTTTGGCTAAAGCACGACCTCCGGATCGACGACCACCCCGCCCTCCTCGCCGCTTCCAACCACTCCGCCGTGGTTCCAATCTATGTCTTCGATCATCGCATCATCTCCCGTTTTCCCGAGAAAATGCAAGAAACGGTTTTGATTGCTTTGCAAGATTTGAGAAGCTCGTTGAAGGATAAAGGTGCGAACTTGATGATTCGGTTGGGGAATGCCGAATATGTGATTCAACAGCTTGTAAAAGAGGTTCAGTTTGTTAGTACGGTATATGCCGAGGAGGAGGTGGAGTATGGCTTAAGGAAGATGACTGATAGTGTCAGGGACACCTTGACGGCAACGCGGTCTTCCCCCAACTTTGTGCTGTGGCGGACTCCGTTTTATGATGTGAAGAGCTTGAAGGGTATTCCAGATTCATACGATGAATTTACCAAACTTAGATTGCCAGTAACTTTGCCACTGTCGCCCGCAACATTAACTGGTCGAAACATGGAAGTGGATTGGGGTCCCATCCCCACATTTAATGATTTGAAACAATTTATCAAAGAAAATCCATGCAAAATGGAAGAGAGTTGGAATTCAATGAAAGAGATGTGCGCTGAAACAATTTTGATGAAGGAATTTTTGAAGCCTGGGCAAAGAAATCTAAATAATTCGAGTTCTAGACATGTCCAGGTCCCATCAAAGAAGCTTGAGAATTCTATGTTTGTCACTACAAAGGGAAATTCTCTGGGAGGGGGGACGAGTAACGCATTGAAAACTTTGGGTGCATACTTGAGATATTTGGAGGGAACAGAACGTGATCACTACTGGTGGGAAATACATGAACAGATGCCCTGTGCTGAAAGTCGGGATGGAGCTTCATTTACTACACTCTTTGGTCCTGCCCTTTTTCTTGGCATCCTATCCAGAAGAAGAGTATATTTTGAAGCTCTCAAGTATAAGAAAGAACGAGATTCTGGATTTCTGTCTCCTTTTGGATATTCATCCTCTACAATTGCCGCAACTGTTGATTCGGTGTGCTCAATGGAGTGGTATTTGCTTGTCGCTCTAAAAAGTCAGTTAAGTGATGACAGAAGATTTCGTATTCGTATCTGGAGATGGAAAGGCTATCTAATTCAGTATACAGTTGTGGGTGAAGAAGGTCCTGCTACTCTTCTGGTTCATGGTTTTGGAGCCTTCTTGGAGCATTACCGTGACAACATACGCGCCATTGCTGAAGGTGGAAACAGAGTATGGGCCATCACGCTATTAGGATTTGGCAAATCGGAAAAGCCAAATATTGAATACACTGAACTCGTGTGGGCTGAAATGCTTAGAGATTTCATTATTGAAGTTGTGGGTGAACCAGCACATCTGGTTGGGAACTCAATTGGTGGTTATATTATTGCAATTGTCGCTCGTCTTTGGCCTGCTTTGGTCAAATCTGTGGTTCTTATCAACAGTGGTGGGAATGTTATTCCAGGATATTCCTCTGTGTTGTTCGCCAAAGAGAGAAGAACTTCGGGTGCTTCATGGCTAGGTGCTAAATTCCTTTTGTTCTACTTAAGGTTGACACTCAAGGACATAGTGAAGAATTGCTACCCATCTAAAACAGAGCGAGTTGACAGTTGGCTTATTGATGAAATGCTAAGAGCATCATACGATCCCGGGGTGGCAGTGGTCCTTGAAAGCGTTTTTAGCTTCAATCTCTCAATCCCTCTTAATTATCTCTTGGATGAATTCAAGGACAAAGTTATGATTATACAGGGAATGAGAGATCCAATATCGGACTCCAAGTCAACAGTGGCTATGCTTAAAGAGCATTGTGCTGGGTTCATCGTCAAGGAGTTGGATGCCGGTCATTGCCCGCACGACGAAGTGCCCGGTGAAGTGAATTCAATTATTCGTGAATGGATAGTGAACCTGAGCAGTAAACTTCCGGCTGTTAGCTTCAAGTATATACGCTACAAAATCCATGTTGATGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_6 DNA_photolyase

Protein Analysis

703

Amino Acids

79.38

Weight (kDa)

8.59

Isoelectric Point (pI)

38.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_photolyase PF00875 47 - 179 5.9e-21 DNA photolyase
Abhydrolase_1 PF00561 432 - 666 6.8e-17 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 432 - 672 2.2e-16 Alpha/beta hydrolase family
Hydrolase_4 PF12146 432 - 646 3.6e-07 Serine aminopeptidase, S33
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 78
AccI GTMKAC 1 cut(s) 1262
AccII CGCG 2 cut(s) 481, 1347
AccIII TCCGGA 1 cut(s) 165
AciI CCGC 8 cut(s) 183, 195, 210, 481, 508, 606, 1140, 1988
AclWI GGATC 3 cut(s) 176, 1778, 1892
AcoI YGGCCR 1 cut(s) 129
AcsI RAATTY 8 cut(s) 563, 715, 758, 835, 862, 1667, 1859, 2014
AcuI CTGAAG 1 cut(s) 1377
AfaI GTAC 1 cut(s) 403
AfiI CCNNNNNNNGG 2 cut(s) 94, 147
AflII CTTAAG 2 cut(s) 436, 1684
AflIII ACRYGT 1 cut(s) 805
AhdI GACNNNNNGTC 1 cut(s) 1915
AjnI CCWGG 3 cut(s) 769, 810, 1600
AluBI AGCT 8 cut(s) 309, 376, 534, 829, 998, 1070, 1821, 2070
AluI AGCT 8 cut(s) 309, 376, 534, 829, 998, 1070, 1821, 2070
Alw21I GWGCWC 1 cut(s) 1163
Alw26I GTCTC 2 cut(s) 89, 1113
AlwI GGATC 3 cut(s) 176, 1778, 1892
Ama87I CYCGRG 2 cut(s) 260, 1787
Aor13HI TCCGGA 1 cut(s) 165
AoxI GGCC 4 cut(s) 3, 129, 1377, 1547
ApoI RAATTY 8 cut(s) 563, 715, 758, 835, 862, 1667, 1859, 2014
Asp700I GAANNNNTTC 1 cut(s) 1639
AspLEI GCGC 2 cut(s) 737, 1349
AspS9I GGNCC 6 cut(s) 644, 814, 1019, 1283, 1377, 1801
AsuC2I CCSGG 3 cut(s) 1788, 1789, 2004
AsuHPI GGTGA 3 cut(s) 1286, 1493, 2018
AvaI CYCGRG 2 cut(s) 260, 1787
AvaII GGWCC 5 cut(s) 644, 814, 1019, 1283, 1801
BaeGI GKGCMC 1 cut(s) 2004
BanI GGYRCC 1 cut(s) 78
BarI GAAGNNNNNNTAC 2 cut(s) 1703, 1735
BauI CACGAG 1 cut(s) 1436
BbsI GAAGAC 2 cut(s) 223, 477
Bbv12I GWGCWC 1 cut(s) 1163
BccI CCATC 6 cut(s) 656, 826, 986, 1233, 1388, 1732
BceAI ACGGC 5 cut(s) 66, 125, 130, 197, 489
BciT130I CCWGG 3 cut(s) 771, 812, 1602
BclI TGATCA 1 cut(s) 940
BcnI CCSGG 3 cut(s) 1788, 1789, 2004
BcoDI GTCTC 2 cut(s) 89, 1113
BfaI CTAG 2 cut(s) 801, 1658
BfrI CTTAAG 2 cut(s) 436, 1684
BisI GCNGC 2 cut(s) 195, 1140
BlsI GCNGC 2 cut(s) 196, 1141
Bme1390I CCNGG 6 cut(s) 771, 812, 1602, 1788, 1789, 2004
Bme18I GGWCC 5 cut(s) 644, 814, 1019, 1283, 1801
BmeRI GACNNNNNGTC 1 cut(s) 1915
BmeT110I CYCGRG 2 cut(s) 260, 1787
BmgT120I GGNCC 6 cut(s) 644, 814, 1019, 1283, 1377, 1801
BmiI GGNNCC 6 cut(s) 80, 219, 645, 646, 816, 1315
BmrFI CCNGG 6 cut(s) 771, 812, 1602, 1788, 1789, 2004
BmsI GCATC 6 cut(s) 72, 252, 960, 1047, 1784, 1963
BpiI GAAGAC 2 cut(s) 223, 477
BpmI CTGGAG 1 cut(s) 1255
Bpu10I CCTNAGC 1 cut(s) 2045
BpuEI CTTGAG 4 cut(s) 851, 934, 1058, 1682
BpuMI CCSGG 3 cut(s) 1788, 1789, 2004
BsaBI GATNNNNATC 1 cut(s) 1123
BsaJI CCNNGG 5 cut(s) 213, 414, 770, 1787, 1788
BsaWI WCCGGW 1 cut(s) 165
BsaXI ACNNNNNCTCC 2 cut(s) 413, 443
Bsc4I CCNNNNNNNGG 2 cut(s) 94, 147
Bse118I RCCGGY 3 cut(s) 127, 131, 1976
Bse1I ACTGG 3 cut(s) 584, 622, 953
Bse3DI GCAATG 2 cut(s) 1350, 1981
Bse8I GATNNNNATC 1 cut(s) 1123
BseAI TCCGGA 1 cut(s) 165
BseBI CCWGG 3 cut(s) 771, 812, 1602
BseDI CCNNGG 5 cut(s) 213, 414, 770, 1787, 1788
BseGI GGATG 6 cut(s) 648, 997, 1038, 1124, 1861, 1978
BseJI GATNNNNATC 1 cut(s) 1123
BseLI CCNNNNNNNGG 2 cut(s) 94, 147
BseMI GCAATG 2 cut(s) 1350, 1981
BseMII CTCAG 3 cut(s) 113, 134, 2036
BseNI ACTGG 3 cut(s) 584, 622, 953
BseRI GAGGAG 4 cut(s) 34, 179, 431, 434
BseSI GKGCMC 1 cut(s) 2004
BseX3I CGGCCG 1 cut(s) 129
BseYI CCCAGC 1 cut(s) 1949
BsgI GTGCAG 1 cut(s) 8
Bsh1236I CGCG 2 cut(s) 481, 1347
Bsh1285I CGRYCG 1 cut(s) 132
BshFI GGCC 4 cut(s) 5, 131, 1379, 1549
BshNI GGYRCC 1 cut(s) 78
BsiEI CGRYCG 1 cut(s) 132
BsiHKAI GWGCWC 1 cut(s) 1163
BsiHKCI CYCGRG 2 cut(s) 260, 1787
BsiSI CCGG 7 cut(s) 128, 132, 166, 1788, 1977, 2004, 2060
BslFI GGGAC 4 cut(s) 476, 630, 800, 892
BslI CCNNNNNNNGG 2 cut(s) 94, 147
BsmAI GTCTC 2 cut(s) 89, 1113
BsmBI CGTCTC 1 cut(s) 89
BsmFI GGGAC 4 cut(s) 476, 630, 800, 892
BsmI GAATGC 1 cut(s) 358
BsnI GGCC 4 cut(s) 5, 131, 1379, 1549
BsoBI CYCGRG 2 cut(s) 260, 1787
Bsp1286I GDGCHC 2 cut(s) 1163, 2004
Bsp13I TCCGGA 1 cut(s) 165
Bsp143I GATC 5 cut(s) 168, 235, 940, 1783, 1897
BspACI CCGC 8 cut(s) 183, 195, 210, 481, 508, 606, 1140, 1988
BspANI GGCC 4 cut(s) 5, 131, 1379, 1549
BspCNI CTCAG 3 cut(s) 112, 133, 2037
BspEI TCCGGA 1 cut(s) 165
BspFNI CGCG 2 cut(s) 481, 1347
BspLI GGNNCC 6 cut(s) 80, 219, 645, 646, 816, 1315
BspPI GGATC 3 cut(s) 176, 1778, 1892
BspQI GCTCTTC 1 cut(s) 524
BspT107I GGYRCC 1 cut(s) 78
BspTI CTTAAG 2 cut(s) 436, 1684
BsrDI GCAATG 2 cut(s) 1350, 1981
BsrFI RCCGGY 3 cut(s) 127, 131, 1976
BsrI ACTGG 3 cut(s) 584, 622, 953
BssAI RCCGGY 3 cut(s) 127, 131, 1976
BssECI CCNNGG 5 cut(s) 213, 414, 770, 1787, 1788
BssMI GATC 5 cut(s) 168, 235, 940, 1783, 1897
BssNAI GTATAC 1 cut(s) 1263
BssSI CACGAG 1 cut(s) 1436
Bst1107I GTATAC 1 cut(s) 1263
Bst2BI CACGAG 1 cut(s) 1436
Bst2UI CCWGG 3 cut(s) 771, 812, 1602
Bst6I CTCTTC 4 cut(s) 524, 699, 1048, 1299
BstAFI CTTAAG 2 cut(s) 436, 1684
BstC8I GCNNGC 5 cut(s) 129, 133, 606, 1551, 1988
BstDEI CTNAG 6 cut(s) 99, 120, 575, 1454, 1769, 2045
BstDSI CCRYGG 1 cut(s) 213
BstF5I GGATG 6 cut(s) 648, 997, 1038, 1124, 1861, 1978
BstFNI CGCG 2 cut(s) 481, 1347
BstHHI GCGC 2 cut(s) 737, 1349
BstKTI GATC 5 cut(s) 171, 238, 943, 1786, 1900
BstMAI GTCTC 2 cut(s) 89, 1113
BstMBI GATC 5 cut(s) 168, 235, 940, 1783, 1897
BstMCI CGRYCG 1 cut(s) 132
BstMWI GCNNNNNNNGC 6 cut(s) 137, 191, 601, 1535, 1818, 1939
BstNI CCWGG 3 cut(s) 771, 812, 1602
BstNSI RCATGY 1 cut(s) 809
BstSCI CCNGG 6 cut(s) 769, 810, 1600, 1786, 1787, 2002
BstSLI GKGCMC 1 cut(s) 2004
BstUI CGCG 2 cut(s) 481, 1347
BstV2I GAAGAC 2 cut(s) 223, 477
BstX2I RGATCY 1 cut(s) 1897
BstYI RGATCY 1 cut(s) 1897
BstZ17I GTATAC 1 cut(s) 1263
BstZI CGGCCG 1 cut(s) 129
BsuRI GGCC 4 cut(s) 5, 131, 1379, 1549
BtgI CCRYGG 1 cut(s) 213
BtgZI GCGATG 1 cut(s) 224
BtsCI GGATG 6 cut(s) 648, 997, 1038, 1124, 1861, 1978
BtsI GCAGTG 1 cut(s) 1803
BtsIMutI CAGTG 5 cut(s) 596, 1428, 1588, 1803, 1929
Cac8I GCNNGC 5 cut(s) 129, 133, 606, 1551, 1988
CfoI GCGC 2 cut(s) 737, 1349
Cfr10I RCCGGY 3 cut(s) 127, 131, 1976
Cfr13I GGNCC 6 cut(s) 644, 814, 1019, 1283, 1377, 1801
Cfr9I CCCGGG 1 cut(s) 1787
Csp6I GTAC 1 cut(s) 402
CspCI CAANNNNNGTGG 2 cut(s) 1567, 1602
CviAII CATG 7 cut(s) 628, 693, 806, 962, 1304, 1653, 2096
CviQI GTAC 1 cut(s) 402
DdeI CTNAG 6 cut(s) 99, 120, 575, 1454, 1769, 2045
DpnI GATC 5 cut(s) 170, 237, 942, 1785, 1899
DpnII GATC 5 cut(s) 168, 235, 940, 1783, 1897
DriI GACNNNNNGTC 1 cut(s) 1915
EaeI YGGCCR 1 cut(s) 129
EagI CGGCCG 1 cut(s) 129
Eam1104I CTCTTC 4 cut(s) 524, 699, 1048, 1299
Eam1105I GACNNNNNGTC 1 cut(s) 1915
EarI CTCTTC 4 cut(s) 524, 699, 1048, 1299
EciI GGCGGA 2 cut(s) 199, 523
EclXI CGGCCG 1 cut(s) 129
Eco47I GGWCC 5 cut(s) 644, 814, 1019, 1283, 1801
Eco52I CGGCCG 1 cut(s) 129
Eco57I CTGAAG 1 cut(s) 1377
Eco88I CYCGRG 2 cut(s) 260, 1787
EcoO109I RGGNCCY 3 cut(s) 644, 814, 1283
EcoRI GAATTC 4 cut(s) 715, 835, 1859, 2014
EcoRII CCWGG 3 cut(s) 769, 810, 1600
Esp3I CGTCTC 1 cut(s) 89
FaeI CATG 7 cut(s) 631, 696, 809, 965, 1307, 1656, 2099
FaqI GGGAC 4 cut(s) 476, 630, 800, 892
FatI CATG 7 cut(s) 627, 692, 805, 961, 1303, 1652, 2095
FauI CCCGC 3 cut(s) 190, 613, 1995
FbaI TGATCA 1 cut(s) 940
FblI GTMKAC 1 cut(s) 1262
Fnu4HI GCNGC 2 cut(s) 195, 1140
FokI GGATG 6 cut(s) 635, 1004, 1025, 1111, 1868, 1985
Fsp4HI GCNGC 2 cut(s) 195, 1140
FspBI CTAG 2 cut(s) 801, 1658
GlaI GCGC 2 cut(s) 736, 1348
GluI GCNGC 2 cut(s) 195, 1140
GsaI CCCAGC 1 cut(s) 1953
GsuI CTGGAG 1 cut(s) 1255
HaeIII GGCC 4 cut(s) 5, 131, 1379, 1549
HapII CCGG 7 cut(s) 128, 132, 166, 1788, 1977, 2004, 2060
HhaI GCGC 2 cut(s) 737, 1349
Hin1II CATG 7 cut(s) 631, 696, 809, 965, 1307, 1656, 2099
Hin6I GCGC 2 cut(s) 735, 1347
HinP1I GCGC 2 cut(s) 735, 1347
HincII GTYRAC 4 cut(s) 112, 1692, 1744, 1920
HindII GTYRAC 4 cut(s) 112, 1692, 1744, 1920
HindIII AAGCTT 1 cut(s) 827
HinfI GANTC 7 cut(s) 340, 367, 511, 551, 1094, 1151, 1910
HpaII CCGG 7 cut(s) 128, 132, 166, 1788, 1977, 2004, 2060
HphI GGTGA 3 cut(s) 1286, 1493, 2018
Hpy166II GTNNAC 8 cut(s) 112, 1263, 1484, 1692, 1744, 1920, 2041, 2054
Hpy188I TCNGA 4 cut(s) 102, 123, 1408, 1909
Hpy188III TCNNGA 9 cut(s) 166, 260, 548, 801, 989, 1047, 1098, 1234, 2027
Hpy8I GTNNAC 8 cut(s) 112, 1263, 1484, 1692, 1744, 1920, 2041, 2054
Hpy99I CGWCG 3 cut(s) 146, 176, 1997
HpyAV CCTTC 8 cut(s) 42, 67, 310, 532, 748, 1274, 1327, 1352
HpyCH4IV ACGT 1 cut(s) 937
HpyCH4V TGCA 7 cut(s) 25, 63, 271, 295, 696, 908, 1529
HpyF10VI GCNNNNNNNGC 6 cut(s) 137, 191, 601, 1535, 1818, 1939
HpyF3I CTNAG 6 cut(s) 99, 120, 575, 1454, 1769, 2045
HpySE526I ACGT 1 cut(s) 937
Hsp92II CATG 7 cut(s) 631, 696, 809, 965, 1307, 1656, 2099
HspAI GCGC 2 cut(s) 735, 1347
KflI GGGWCCC 1 cut(s) 644
Kpn2I TCCGGA 1 cut(s) 165
KroI GCCGGC 2 cut(s) 127, 131
KroNI GCCGGC 2 cut(s) 129, 133
Ksp22I TGATCA 1 cut(s) 940
Kzo9I GATC 5 cut(s) 168, 235, 940, 1783, 1897
LguI GCTCTTC 1 cut(s) 524
LmnI GCTCC 3 cut(s) 995, 1313, 1324
LweI GCATC 6 cut(s) 72, 252, 960, 1047, 1784, 1963
MaeI CTAG 2 cut(s) 801, 1658
MaeII ACGT 1 cut(s) 937
MaeIII GTNAC 5 cut(s) 13, 586, 847, 884, 1334
MalI GATC 5 cut(s) 170, 237, 942, 1785, 1899
MboI GATC 5 cut(s) 168, 235, 940, 1783, 1897
MfeI CAATTG 3 cut(s) 1134, 1509, 1530
MflI RGATCY 1 cut(s) 1897
MhlI GDGCHC 2 cut(s) 1163, 2004
MlyI GAGTC 2 cut(s) 505, 1904
MmeI TCCRAC 3 cut(s) 225, 692, 1950
MroI TCCGGA 1 cut(s) 165
MroNI GCCGGC 2 cut(s) 127, 131
MroXI GAANNNNTTC 1 cut(s) 1639
MseI TTAA 7 cut(s) 437, 614, 660, 1202, 1685, 1842, 1935
MslI CAYNNNNRTG 3 cut(s) 632, 1332, 2100
MspCI CTTAAG 2 cut(s) 436, 1684
MspI CCGG 7 cut(s) 128, 132, 166, 1788, 1977, 2004, 2060
MspR9I CCNGG 6 cut(s) 771, 812, 1602, 1788, 1789, 2004
MunI CAATTG 3 cut(s) 1134, 1509, 1530
Mva1269I GAATGC 1 cut(s) 358
MvaI CCWGG 3 cut(s) 771, 812, 1602
MvnI CGCG 2 cut(s) 481, 1347
MwoI GCNNNNNNNGC 6 cut(s) 137, 191, 601, 1535, 1818, 1939
NaeI GCCGGC 2 cut(s) 129, 133
NciI CCSGG 3 cut(s) 1788, 1789, 2004
NdeII GATC 5 cut(s) 168, 235, 940, 1783, 1897
NgoMIV GCCGGC 2 cut(s) 127, 131
NlaIII CATG 7 cut(s) 631, 696, 809, 965, 1307, 1656, 2099
NlaIV GGNNCC 6 cut(s) 80, 219, 645, 646, 816, 1315
NmeAIII GCCGAG 1 cut(s) 439
NmuCI GTSAC 3 cut(s) 13, 847, 1334
NspI RCATGY 1 cut(s) 809
PciI ACATGT 1 cut(s) 805
PciSI GCTCTTC 1 cut(s) 524
PctI GAATGC 1 cut(s) 358
PdiI GCCGGC 2 cut(s) 129, 133
PdmI GAANNNNTTC 1 cut(s) 1639
PfeI GAWTC 5 cut(s) 340, 367, 551, 1094, 1151
PfoI TCCNGGA 1 cut(s) 1600
PkrI GCNGC 2 cut(s) 196, 1141
PleI GAGTC 2 cut(s) 505, 1904
PpsI GAGTC 2 cut(s) 505, 1904
PpuMI RGGWCCY 3 cut(s) 644, 814, 1283
PscI ACATGT 1 cut(s) 805
Psp5II RGGWCCY 3 cut(s) 644, 814, 1283
Psp6I CCWGG 3 cut(s) 769, 810, 1600
PspFI CCCAGC 1 cut(s) 1949
PspGI CCWGG 3 cut(s) 769, 810, 1600
PspN4I GGNNCC 6 cut(s) 80, 219, 645, 646, 816, 1315
PspPI GGNCC 6 cut(s) 644, 814, 1019, 1283, 1377, 1801
PspPPI RGGWCCY 3 cut(s) 644, 814, 1283
PsrI GAACNNNNNNTAC 2 cut(s) 372, 404
PsuI RGATCY 1 cut(s) 1897
RsaI GTAC 1 cut(s) 403
RsaNI GTAC 1 cut(s) 402
RseI CAYNNNNRTG 3 cut(s) 632, 1332, 2100
SapI GCTCTTC 1 cut(s) 524
SaqAI TTAA 7 cut(s) 437, 614, 660, 1202, 1685, 1842, 1935
SatI GCNGC 2 cut(s) 195, 1140
Sau3AI GATC 5 cut(s) 168, 235, 940, 1783, 1897
Sau96I GGNCC 6 cut(s) 644, 814, 1019, 1283, 1377, 1801
SchI GAGTC 2 cut(s) 505, 1904
ScrFI CCNGG 6 cut(s) 771, 812, 1602, 1788, 1789, 2004
SduI GDGCHC 2 cut(s) 1163, 2004
SfaNI GCATC 6 cut(s) 72, 252, 960, 1047, 1784, 1963
SinI GGWCC 5 cut(s) 644, 814, 1019, 1283, 1801
SmaI CCCGGG 1 cut(s) 1789
SmiMI CAYNNNNRTG 3 cut(s) 632, 1332, 2100
SmlI CTYRAG 6 cut(s) 436, 830, 913, 1073, 1684, 1697
SmoI CTYRAG 6 cut(s) 436, 830, 913, 1073, 1684, 1697
SsiI CCGC 8 cut(s) 183, 195, 210, 481, 508, 606, 1140, 1988
SspI AATATT 1 cut(s) 1420
SspMI CTAG 2 cut(s) 801, 1658
StyD4I CCNGG 6 cut(s) 769, 810, 1600, 1786, 1787, 2002
TaiI ACGT 1 cut(s) 940
TaqI TCGA 4 cut(s) 171, 234, 622, 794
TauI GCSGC 2 cut(s) 197, 1142
TfiI GAWTC 5 cut(s) 340, 367, 551, 1094, 1151
Tru1I TTAA 7 cut(s) 437, 614, 660, 1202, 1685, 1842, 1935
Tru9I TTAA 7 cut(s) 437, 614, 660, 1202, 1685, 1842, 1935
TscAI CASTG 5 cut(s) 603, 1435, 1588, 1803, 1929
TseFI GTSAC 3 cut(s) 13, 847, 1334
Tsp45I GTSAC 3 cut(s) 13, 847, 1334
TspGWI ACGGA 1 cut(s) 504
TspMI CCCGGG 1 cut(s) 1787
TspRI CASTG 5 cut(s) 603, 1435, 1588, 1803, 1929
Vha464I CTTAAG 2 cut(s) 436, 1684
VpaK11BI GGWCC 5 cut(s) 644, 814, 1019, 1283, 1801
XapI RAATTY 8 cut(s) 563, 715, 758, 835, 862, 1667, 1859, 2014
XbaI TCTAGA 1 cut(s) 800
XceI RCATGY 1 cut(s) 809
XcmI CCANNNNNNNNNTGG 1 cut(s) 1921
XmaI CCCGGG 1 cut(s) 1787
XmiI GTMKAC 1 cut(s) 1262
XmnI GAANNNNTTC 1 cut(s) 1639
XspI CTAG 2 cut(s) 801, 1658
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.