Rroxscaffold_4G00283190

DNA photolyase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0005426
Physical Location & Seq
Forward (+)
5169724 .. 5173587
3864 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00283190.1

Sequence Viewer

Length: 1974 bp
ATGGCTTCACTCTTCACTCTCCATCACTCTCCCTCGCTTTCCTTCTCCCCAAAAACCCACCTTTACTCGCCGAAACGGTGCCGTTTCCGAGCTCAAATTTCAGTCAACGGCGGAGCGAAGACCGGCGCCGCCGTCGTTTGGCTGAAGCACGACCTCCGAATCGACGATCATCCAGCTCTTCTCGCCGCCGCTAATCACTCCGGAGCTATTCCTCTCTATGTCTTCGACCACCGTATTCTCTCCCGTTTTGAAGATGAAATGCTGGAAATGGTTGCGGTTGCTTTAGAAGATTTGAGAAACTCGTTGAGAGATAAAGGTACGAACTTGATGGTGAGGTTTGGGAATGCAGAGAATGTGATACAAGAGATTGTAGAAAAGGTTCGGGTTGTGAGCAGTGTGTATGCTGAGGAGGAGGTAGAGTATGGTTTAAGGGAGATGGTTGGTGTTGTCAAGGACAGATTGGGAACAATGCCTTCTGCCCCTGACTTTGTGCTGTGGCGGACGCCGTTTTATGATGTGAAGAGCTTGAAGGGCATTCCTGATTCCTACAATGACTTTACTAAACTTCGATTGCCAATAACCACGCCTCTTCCACCAGCTACATTTTCCGGTAGTGCAATGGAGTTGGACTGGGGTCCTATGCCCACATTTGATGATTTGAAGGAGTTTGTAAACGCAAATCCATGCAAAATGCAAGAGAGGTGGACTTCAATCAAGGTCCAGTCAAAGAGTCGTGATGAAGTTTTTGCCACCACAAAAGGAAATTCTATGGGGGGTCAGAGGAGCACGGTATTGAATTCTTTGGGTGCATACTTCAGATACTTGGATGGAGAATCACGGGATGACTTCTGGCAGAAGGTGCATGAAAGGATGCCCTATGCTGAAAGCCGGGATGGAGCTTCATTTAATACTCTCTTTGGTACAGCCCTTTCTCTTGGCATCCTATCCAGAAGGAGAGTATATTTTGAAGCTATTAAGTATGACAAAGAACGAAACTGTGGATTTCTATCTCCTTTTGGTTCAGGAGCAACAATTGCTGCTGCTGTTGATTCGGTGTGCTCAATGGAGTGGTATTGGCTTCTGGCTCTCAAAAGTCAGATAAGTAATGATAGAAGATATTATATTCGTATCTGGAGATGGAAAGGCTATCTAATTCAGTATACCATTGTTGGTCATGAAGGTCCTGCTATTCTTCTTGTGCATGGTTTTGGAGCCTTTTTGGAGCATTACCGTGATAACCTAGGTCGCATTGCTGAAGGTGGAAACCGAGTTTGGGCCATTACAATTTTAGGATTTGGTAAATCAGAGAAGCCAAATATTGTGTACACTGAACTCCTGTGGTCTGAAATGCTTAGAGATTTCATTCTTGAAGTTGTGGGTGAACCAGTGCATCTTGTTGGGAACTCAATTGGTGGTTATATTATTGCAATTGTTGCTCGTCTTTGGCCTGCTCTGGCCAAATCTGTTGTTCTTATTAACAGTGGGGGTGAGGTTATTCCATACTCCTCCCCGCCATTCACTAAAGAAAGAAAAACATCAGGGGCTTCATGGCTGGGTGCTCGATTTCTTTTGTTCTACCTAAGGTTTCAACTCAAGGACATAGTGCAGAATTGCTATCCAAATAAAACAGAGCGAGTGGACAATTGGCTTATAAATGAAATGCTAAGAGCATCATATGACCCTGGGGTGGCAGTGGTCCTAGAAAGCGTTTTTAGCTTCAATCTCTCACTCCCTCTTAATTATCTCTTGAAAGGATTCAAGGAAAAGGTTCTCATTATCCAGGGAATGAGAGATCCAATATCCAACTCCAAATCAAAAGTGGCTATGATTAAAGAGCATTCTGATGGGTTCTTAATCAAGGAATTGGATGCTGGTCATTGTCCTCACGACGAACTGCCTGAGGAAGTAAATTCAATTATCTGTGAATGGATAGTAACCCTGACTAGTAAACGCCCTGTTGTGAGCTTTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_6 DNA_photolyase

Protein Analysis

657

Amino Acids

74.27

Weight (kDa)

8.26

Isoelectric Point (pI)

35.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_photolyase PF00875 44 - 155 3e-20 DNA photolyase
Abhydrolase_1 PF00561 395 - 631 4.3e-13 alpha/beta hydrolase fold
Hydrolase_4 PF12146 396 - 514 4.5e-07 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 397 - 637 2.7e-16 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1652
AccB1I GGYRCC 2 cut(s) 78, 125
AccI GTMKAC 1 cut(s) 1160
AccIII TCCGGA 1 cut(s) 200
AciI CCGC 7 cut(s) 111, 129, 186, 189, 275, 499, 1511
AclWI GGATC 1 cut(s) 1787
AcoI YGGCCR 1 cut(s) 1455
AcsI RAATTY 4 cut(s) 96, 763, 796, 1909
AcuI CTGAAG 3 cut(s) 164, 799, 1275
AcyI GRCGYC 2 cut(s) 126, 503
AfaI GTAC 3 cut(s) 319, 922, 1325
AfiI CCNNNNNNNGG 3 cut(s) 138, 1273, 1687
AhlI ACTAGT 1 cut(s) 1943
AjnI CCWGG 2 cut(s) 1681, 1779
AjuI GAANNNNNNNTTGG 2 cut(s) 1255, 1287
AluBI AGCT 9 cut(s) 92, 176, 206, 525, 599, 899, 971, 1716, 1965
AluI AGCT 9 cut(s) 92, 176, 206, 525, 599, 899, 971, 1716, 1965
Alw21I GWGCWC 4 cut(s) 94, 788, 1061, 1561
AlwI GGATC 1 cut(s) 1787
Aor13HI TCCGGA 1 cut(s) 200
AoxI GGCC 3 cut(s) 1275, 1445, 1455
ApeKI GCWGC 2 cut(s) 1037, 1040
ApoI RAATTY 4 cut(s) 96, 763, 796, 1909
Asp700I GAANNNNTTC 3 cut(s) 378, 1754, 1767
AspA2I CCTAGG 1 cut(s) 1240
AspLEI GCGC 1 cut(s) 128
AspS9I GGNCC 5 cut(s) 635, 718, 1181, 1275, 1696
AsuC2I CCSGG 1 cut(s) 890
AsuHPI GGTGA 3 cut(s) 343, 1391, 1499
AvaII GGWCC 4 cut(s) 635, 718, 1181, 1696
AvrII CCTAGG 1 cut(s) 1240
AxyI CCTNAGG 2 cut(s) 1580, 1899
BalI TGGCCA 1 cut(s) 1457
BanI GGYRCC 2 cut(s) 78, 125
BanII GRGCYC 1 cut(s) 94
BbsI GAAGAC 2 cut(s) 125, 214
Bbv12I GWGCWC 4 cut(s) 94, 788, 1061, 1561
BbvCI CCTCAGC 1 cut(s) 405
BbvI GCAGC 2 cut(s) 1024, 1027
BccI CCATC 7 cut(s) 30, 322, 430, 821, 887, 1131, 1838
BceAI ACGGC 4 cut(s) 66, 116, 124, 490
BciT130I CCWGG 2 cut(s) 1683, 1781
BcnI CCSGG 1 cut(s) 890
BcuI ACTAGT 1 cut(s) 1943
BfaI CTAG 3 cut(s) 1241, 1700, 1944
BfoI RGCGCY 1 cut(s) 129
BisI GCNGC 5 cut(s) 129, 186, 189, 1038, 1041
BlnI CCTAGG 1 cut(s) 1240
BlsI GCNGC 5 cut(s) 130, 187, 190, 1039, 1042
Bme1390I CCNGG 3 cut(s) 890, 1683, 1781
Bme18I GGWCC 4 cut(s) 635, 718, 1181, 1696
BmgT120I GGNCC 5 cut(s) 635, 718, 1181, 1275, 1696
BmiI GGNNCC 4 cut(s) 80, 127, 636, 1213
BmrFI CCNGG 3 cut(s) 890, 1683, 1781
BmrI ACTGGG 1 cut(s) 640
BmsI GCATC 5 cut(s) 861, 948, 1399, 1679, 1858
BmuI ACTGGG 1 cut(s) 640
BoxI GACNNNNGTC 1 cut(s) 633
BpiI GAAGAC 2 cut(s) 125, 214
BpmI CTGGAG 1 cut(s) 1153
Bpu10I CCTNAGC 1 cut(s) 405
BpuEI CTTGAG 1 cut(s) 1577
BpuMI CCSGG 1 cut(s) 890
BsaBI GATNNNNATC 1 cut(s) 1006
BsaHI GRCGYC 2 cut(s) 126, 503
BsaJI CCNNGG 4 cut(s) 1240, 1681, 1682, 1780
BsaWI WCCGGW 2 cut(s) 200, 608
BsaXI ACNNNNNCTCC 2 cut(s) 404, 434
Bsc4I CCNNNNNNNGG 3 cut(s) 138, 1273, 1687
Bse118I RCCGGY 1 cut(s) 122
Bse1I ACTGG 3 cut(s) 635, 721, 1385
Bse21I CCTNAGG 2 cut(s) 1580, 1899
Bse3DI GCAATG 2 cut(s) 624, 1248
Bse8I GATNNNNATC 1 cut(s) 1006
BseAI TCCGGA 1 cut(s) 200
BseBI CCWGG 2 cut(s) 1683, 1781
BseDI CCNNGG 4 cut(s) 1240, 1681, 1682, 1780
BseGI GGATG 7 cut(s) 169, 832, 847, 876, 898, 939, 1873
BseJI GATNNNNATC 1 cut(s) 1006
BseLI CCNNNNNNNGG 3 cut(s) 138, 1273, 1687
BseMI GCAATG 2 cut(s) 624, 1248
BseMII CTCAG 2 cut(s) 396, 1890
BseNI ACTGG 3 cut(s) 635, 721, 1385
BseRI GAGGAG 4 cut(s) 422, 425, 796, 1495
BseXI GCAGC 2 cut(s) 1024, 1027
BseYI CCCAGC 1 cut(s) 1552
BsgI GTGCAG 1 cut(s) 1625
BshFI GGCC 3 cut(s) 1277, 1447, 1457
BshNI GGYRCC 2 cut(s) 78, 125
BsiHKAI GWGCWC 4 cut(s) 94, 788, 1061, 1561
BsiSI CCGG 4 cut(s) 123, 201, 609, 889
BslI CCNNNNNNNGG 3 cut(s) 138, 1273, 1687
BsmI GAATGC 3 cut(s) 349, 534, 1837
BsnI GGCC 3 cut(s) 1277, 1447, 1457
Bsp1286I GDGCHC 4 cut(s) 94, 788, 1061, 1561
Bsp13I TCCGGA 1 cut(s) 200
Bsp1407I TGTACA 1 cut(s) 1323
Bsp143I GATC 2 cut(s) 166, 1792
BspACI CCGC 7 cut(s) 111, 129, 186, 189, 275, 499, 1511
BspANI GGCC 3 cut(s) 1277, 1447, 1457
BspCNI CTCAG 2 cut(s) 397, 1891
BspEI TCCGGA 1 cut(s) 200
BspHI TCATGA 1 cut(s) 1174
BspLI GGNNCC 4 cut(s) 80, 127, 636, 1213
BspPI GGATC 1 cut(s) 1787
BspQI GCTCTTC 2 cut(s) 183, 515
BspT107I GGYRCC 2 cut(s) 78, 125
BsrDI GCAATG 2 cut(s) 624, 1248
BsrFI RCCGGY 1 cut(s) 122
BsrGI TGTACA 1 cut(s) 1323
BsrI ACTGG 3 cut(s) 635, 721, 1385
BssAI RCCGGY 1 cut(s) 122
BssECI CCNNGG 4 cut(s) 1240, 1681, 1682, 1780
BssMI GATC 2 cut(s) 166, 1792
BssNAI GTATAC 1 cut(s) 1161
BssNI GRCGYC 2 cut(s) 126, 503
BssT1I CCWWGG 1 cut(s) 1240
Bst1107I GTATAC 1 cut(s) 1161
Bst2UI CCWGG 2 cut(s) 1683, 1781
Bst4CI ACNGT 6 cut(s) 78, 233, 790, 998, 1232, 1481
Bst6I CTCTTC 4 cut(s) 17, 183, 515, 594
BstACI GRCGYC 2 cut(s) 126, 503
BstAPI GCANNNNNTGC 3 cut(s) 859, 1034, 1433
BstAUI TGTACA 1 cut(s) 1323
BstC8I GCNNGC 1 cut(s) 1449
BstDEI CTNAG 5 cut(s) 405, 1352, 1580, 1664, 1899
BstF5I GGATG 7 cut(s) 169, 832, 847, 876, 898, 939, 1873
BstH2I RGCGCY 1 cut(s) 129
BstHHI GCGC 1 cut(s) 128
BstKTI GATC 2 cut(s) 169, 1795
BstMBI GATC 2 cut(s) 166, 1792
BstMWI GCNNNNNNNGC 6 cut(s) 182, 531, 859, 1034, 1433, 1713
BstNI CCWGG 2 cut(s) 1683, 1781
BstPAI GACNNNNGTC 1 cut(s) 633
BstSCI CCNGG 3 cut(s) 888, 1681, 1779
BstV1I GCAGC 2 cut(s) 1024, 1027
BstV2I GAAGAC 2 cut(s) 125, 214
BstX2I RGATCY 1 cut(s) 1792
BstYI RGATCY 1 cut(s) 1792
BstZ17I GTATAC 1 cut(s) 1161
Bsu36I CCTNAGG 2 cut(s) 1580, 1899
BsuRI GGCC 3 cut(s) 1277, 1447, 1457
BtsCI GGATG 7 cut(s) 169, 832, 847, 876, 898, 939, 1873
BtsI GCAGTG 2 cut(s) 400, 1698
BtsIMutI CAGTG 5 cut(s) 400, 1326, 1392, 1486, 1698
Cac8I GCNNGC 1 cut(s) 1449
CciI TCATGA 1 cut(s) 1174
CfoI GCGC 1 cut(s) 128
Cfr10I RCCGGY 1 cut(s) 122
Cfr13I GGNCC 5 cut(s) 635, 718, 1181, 1275, 1696
CseI GACGC 1 cut(s) 511
Csp6I GTAC 3 cut(s) 318, 921, 1324
CspCI CAANNNNNGTGG 2 cut(s) 683, 718
CviAII CATG 5 cut(s) 684, 863, 1175, 1202, 1548
CviQI GTAC 3 cut(s) 318, 921, 1324
DdeI CTNAG 5 cut(s) 405, 1352, 1580, 1664, 1899
DinI GGCGCC 1 cut(s) 127
DpnI GATC 2 cut(s) 168, 1794
DpnII GATC 2 cut(s) 166, 1792
EaeI YGGCCR 1 cut(s) 1455
Eam1104I CTCTTC 4 cut(s) 17, 183, 515, 594
EarI CTCTTC 4 cut(s) 17, 183, 515, 594
EciI GGCGGA 2 cut(s) 126, 514
Ecl136II GAGCTC 1 cut(s) 92
Eco130I CCWWGG 1 cut(s) 1240
Eco24I GRGCYC 1 cut(s) 94
Eco47I GGWCC 4 cut(s) 635, 718, 1181, 1696
Eco53kI GAGCTC 1 cut(s) 92
Eco57I CTGAAG 3 cut(s) 164, 799, 1275
Eco81I CCTNAGG 2 cut(s) 1580, 1899
EcoICRI GAGCTC 1 cut(s) 92
EcoO109I RGGNCCY 2 cut(s) 635, 1181
EcoRI GAATTC 1 cut(s) 796
EcoRII CCWGG 2 cut(s) 1681, 1779
EcoT14I CCWWGG 1 cut(s) 1240
EcoT38I GRGCYC 1 cut(s) 94
EgeI GGCGCC 1 cut(s) 127
EheI GGCGCC 1 cut(s) 127
ErhI CCWWGG 1 cut(s) 1240
FaeI CATG 5 cut(s) 687, 866, 1178, 1205, 1551
FatI CATG 5 cut(s) 683, 862, 1174, 1201, 1547
FauI CCCGC 1 cut(s) 1518
FauNDI CATATG 1 cut(s) 1675
FblI GTMKAC 1 cut(s) 1160
Fnu4HI GCNGC 5 cut(s) 129, 186, 189, 1038, 1041
FokI GGATG 7 cut(s) 156, 839, 854, 883, 905, 926, 1880
FriOI GRGCYC 1 cut(s) 94
Fsp4HI GCNGC 5 cut(s) 129, 186, 189, 1038, 1041
FspBI CTAG 3 cut(s) 1241, 1700, 1944
GlaI GCGC 1 cut(s) 127
GluI GCNGC 5 cut(s) 129, 186, 189, 1038, 1041
GsaI CCCAGC 1 cut(s) 1556
GsuI CTGGAG 1 cut(s) 1153
HaeII RGCGCY 1 cut(s) 129
HaeIII GGCC 3 cut(s) 1277, 1447, 1457
HapII CCGG 4 cut(s) 123, 201, 609, 889
HgaI GACGC 1 cut(s) 511
HhaI GCGC 1 cut(s) 128
Hin1I GRCGYC 2 cut(s) 126, 503
Hin1II CATG 5 cut(s) 687, 866, 1178, 1205, 1551
Hin6I GCGC 1 cut(s) 126
HinP1I GCGC 1 cut(s) 126
HincII GTYRAC 1 cut(s) 106
HindII GTYRAC 1 cut(s) 106
HinfI GANTC 6 cut(s) 159, 542, 730, 833, 1049, 1755
HpaII CCGG 4 cut(s) 123, 201, 609, 889
HphI GGTGA 3 cut(s) 343, 1391, 1499
Hpy166II GTNNAC 9 cut(s) 106, 673, 705, 1161, 1324, 1326, 1382, 1639, 1949
Hpy188I TCNGA 8 cut(s) 89, 158, 780, 818, 1098, 1306, 1345, 1843
Hpy8I GTNNAC 9 cut(s) 106, 673, 705, 1161, 1324, 1326, 1382, 1639, 1949
Hpy99I CGWCG 3 cut(s) 137, 167, 1892
HpyAV CCTTC 8 cut(s) 52, 483, 523, 655, 850, 945, 1172, 1250
HpyCH4III ACNGT 6 cut(s) 78, 233, 790, 998, 1232, 1481
HpyF10VI GCNNNNNNNGC 6 cut(s) 182, 531, 859, 1034, 1433, 1713
HpyF3I CTNAG 5 cut(s) 405, 1352, 1580, 1664, 1899
Hsp92I GRCGYC 2 cut(s) 126, 503
Hsp92II CATG 5 cut(s) 687, 866, 1178, 1205, 1551
HspAI GCGC 1 cut(s) 126
KasI GGCGCC 1 cut(s) 125
Kpn2I TCCGGA 1 cut(s) 200
Kzo9I GATC 2 cut(s) 166, 1792
LguI GCTCTTC 2 cut(s) 183, 515
LmnI GCTCC 7 cut(s) 113, 203, 783, 896, 1025, 1211, 1222
Lsp1109I GCAGC 2 cut(s) 1024, 1027
LweI GCATC 5 cut(s) 861, 948, 1399, 1679, 1858
MaeI CTAG 3 cut(s) 1241, 1700, 1944
MaeIII GTNAC 1 cut(s) 1933
MalI GATC 2 cut(s) 168, 1794
MboI GATC 2 cut(s) 166, 1792
MfeI CAATTG 4 cut(s) 1032, 1407, 1428, 1642
MflI RGATCY 1 cut(s) 1792
MhlI GDGCHC 4 cut(s) 94, 788, 1061, 1561
MlsI TGGCCA 1 cut(s) 1457
MluNI TGGCCA 1 cut(s) 1457
Mly113I GGCGCC 1 cut(s) 126
MlyI GAGTC 1 cut(s) 739
MmeI TCCRAC 2 cut(s) 606, 1827
Mox20I TGGCCA 1 cut(s) 1457
MroI TCCGGA 1 cut(s) 200
MroXI GAANNNNTTC 3 cut(s) 378, 1754, 1767
MscI TGGCCA 1 cut(s) 1457
MseI TTAA 7 cut(s) 428, 906, 975, 1476, 1737, 1830, 1853
MslI CAYNNNNRTG 2 cut(s) 1230, 1842
Msp20I TGGCCA 1 cut(s) 1457
MspI CCGG 4 cut(s) 123, 201, 609, 889
MspR9I CCNGG 3 cut(s) 890, 1683, 1781
MunI CAATTG 4 cut(s) 1032, 1407, 1428, 1642
Mva1269I GAATGC 3 cut(s) 349, 534, 1837
MvaI CCWGG 2 cut(s) 1683, 1781
MwoI GCNNNNNNNGC 6 cut(s) 182, 531, 859, 1034, 1433, 1713
NarI GGCGCC 1 cut(s) 126
NciI CCSGG 1 cut(s) 890
NdeI CATATG 1 cut(s) 1675
NdeII GATC 2 cut(s) 166, 1792
NlaIII CATG 5 cut(s) 687, 866, 1178, 1205, 1551
NlaIV GGNNCC 4 cut(s) 80, 127, 636, 1213
PagI TCATGA 1 cut(s) 1174
PasI CCCWGGG 1 cut(s) 1682
PciSI GCTCTTC 2 cut(s) 183, 515
PctI GAATGC 3 cut(s) 349, 534, 1837
PdmI GAANNNNTTC 3 cut(s) 378, 1754, 1767
PfeI GAWTC 5 cut(s) 159, 542, 833, 1049, 1755
PkrI GCNGC 5 cut(s) 130, 187, 190, 1039, 1042
PleI GAGTC 1 cut(s) 738
PluTI GGCGCC 1 cut(s) 129
PpsI GAGTC 1 cut(s) 738
PpuMI RGGWCCY 2 cut(s) 635, 1181
PshAI GACNNNNGTC 1 cut(s) 633
PsiI TTATAA 1 cut(s) 1652
Psp124BI GAGCTC 1 cut(s) 94
Psp5II RGGWCCY 2 cut(s) 635, 1181
Psp6I CCWGG 2 cut(s) 1681, 1779
PspFI CCCAGC 1 cut(s) 1552
PspGI CCWGG 2 cut(s) 1681, 1779
PspN4I GGNNCC 4 cut(s) 80, 127, 636, 1213
PspPI GGNCC 5 cut(s) 635, 718, 1181, 1275, 1696
PspPPI RGGWCCY 2 cut(s) 635, 1181
PsrI GAACNNNNNNTAC 2 cut(s) 363, 395
PsuI RGATCY 1 cut(s) 1792
RsaI GTAC 3 cut(s) 319, 922, 1325
RsaNI GTAC 3 cut(s) 318, 921, 1324
RseI CAYNNNNRTG 2 cut(s) 1230, 1842
SacI GAGCTC 1 cut(s) 94
SapI GCTCTTC 2 cut(s) 183, 515
SaqAI TTAA 7 cut(s) 428, 906, 975, 1476, 1737, 1830, 1853
SatI GCNGC 5 cut(s) 129, 186, 189, 1038, 1041
Sau3AI GATC 2 cut(s) 166, 1792
Sau96I GGNCC 5 cut(s) 635, 718, 1181, 1275, 1696
SchI GAGTC 1 cut(s) 739
ScrFI CCNGG 3 cut(s) 890, 1683, 1781
SduI GDGCHC 4 cut(s) 94, 788, 1061, 1561
SfaNI GCATC 5 cut(s) 861, 948, 1399, 1679, 1858
SfoI GGCGCC 1 cut(s) 127
SinI GGWCC 4 cut(s) 635, 718, 1181, 1696
SmiMI CAYNNNNRTG 2 cut(s) 1230, 1842
SmlI CTYRAG 1 cut(s) 1592
SmoI CTYRAG 1 cut(s) 1592
SpeI ACTAGT 1 cut(s) 1943
SsiI CCGC 7 cut(s) 111, 129, 186, 189, 275, 499, 1511
SspDI GGCGCC 1 cut(s) 125
SspI AATATT 1 cut(s) 1318
SspMI CTAG 3 cut(s) 1241, 1700, 1944
SstI GAGCTC 1 cut(s) 94
StyD4I CCNGG 3 cut(s) 888, 1681, 1779
StyI CCWWGG 1 cut(s) 1240
TaaI ACNGT 6 cut(s) 78, 233, 790, 998, 1232, 1481
TaqI TCGA 4 cut(s) 162, 225, 568, 1561
TatI WGTACW 1 cut(s) 1323
TauI GCSGC 3 cut(s) 131, 188, 191
TfiI GAWTC 5 cut(s) 159, 542, 833, 1049, 1755
Tru1I TTAA 7 cut(s) 428, 906, 975, 1476, 1737, 1830, 1853
Tru9I TTAA 7 cut(s) 428, 906, 975, 1476, 1737, 1830, 1853
TscAI CASTG 5 cut(s) 400, 1333, 1392, 1486, 1698
TseI GCWGC 2 cut(s) 1037, 1040
TspDTI ATGAA 8 cut(s) 270, 753, 879, 891, 1191, 1351, 1536, 1671
TspRI CASTG 5 cut(s) 400, 1333, 1392, 1486, 1698
VpaK11BI GGWCC 4 cut(s) 635, 718, 1181, 1696
XapI RAATTY 4 cut(s) 96, 763, 796, 1909
XcmI CCANNNNNNNNNTGG 1 cut(s) 1816
XmaJI CCTAGG 1 cut(s) 1240
XmiI GTMKAC 1 cut(s) 1160
XmnI GAANNNNTTC 3 cut(s) 378, 1754, 1767
XspI CTAG 3 cut(s) 1241, 1700, 1944
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.