Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0005426

Physical Location & Seq

Genomic Coordinates Reverse (-)

49716912 .. 49721166

Gene Structure 4255 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0385700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGAAGATCGGAACGTGAGAATGAATACTGGAATGTCCGATGTGGTAGCCGGCTGCGTGATGCCGTATATCAAAGACTCCAAGGACCGCGACGCCGTGTCGTTGGTGTGCCGACGGTGGTACGAGCTGGACGCGCTCACGCGCGAGCACGTGACCATCGCGCTCTGCTACACGACGACTCCCGAGCGGCTCAGGAGGCGGTTCCGGCAGCTCAAGTCGCTGAAGCTCAAGGGGAAGCCGAGAGCGGCGATGTTTAATCTGATACCGGAGGATTGGGGAGGCTTTGTGACGCCGTGGGTGGGGGAGATTGCCGAGTCGTTTAAGAGCTTGAAGGCTTTGCATTTCCGGAGAATGATTGTGAGGGATTCCGACTTGGAGCTATTGGCGCGGTCACGCGGCCGTGAGCTCCAATCGCTTAAGCTCGACAAGTGCTCCGGGTTTTCGACTGACGGCCTTGTCCACATCGCCCGCTTCTGCAGGGATTTGAGGACCTTGTTTTTGGAGGAGAGCTCGATAATTGAGAAAGAGGATGAGTGGGGTGAATGGCTACATGAGCTTGCTACAAACAACACTGTACTCGAGACTTTAAACTTCTATATGACGGATCTTGGCAGAATCAGATTTGAAGACCTCGAACTCATAGCCAGGAATTGCCCCTCCTTAACCACTGTGAAAATTAGCGATTGTGAAATTTTGGATCTTCTGGGTTTCTTCCGTCATGCAACTGCTTTAGAAGAATTTTGTGGAGGTTCCTTCGATGATCGATCAGAGAATGATCAATCAGAGAAGTACTCAGTTGTATCACTGCCACGAAAGATATGTCTTTTGGGTCTAACGATGTTGGGGAAGAATGAAATGCCTATTGTATTCCCATTAGCAGCTGCTCTCAAAAAGTTGGATCTCCTATATGCATTGCTCGACACTGAAGACCATTGTACTTTAATTCAAAAGTGCCCCAACTTGGAAGTTCTTGAGACAAGGAATGTCATTGGAGATAGAGGATTAGAAGTCCTTGCTCGGAGTTGCAAGAGACTGAAGAGGCTCCGAATTGAGCGAGGTGCTGATGAGCAAGGTATGGAGGACGAAGATGGTGTTGTTTCACAGAGGGGTCTGATGGCTTTGGCACAGGGCTGCCTGGAACTGGAGTACTTGGCTGTCTACGTATCAGATATCACAAATGCATCTCTGGAATACATTGGGACTCACTCTAAAAATCTAAATGATTTTCGCCTTGTCCTGCTTGACCGTGAAGAGACGATAACAGATTTACCACTTGACAATGGCGTTCGAGCTCTATTGAGGGGATGCCAAAAGCTTCGAAGGTTTGCTTTGTATCTCCGTCCTGGGGGTTTGACTGATTTGGGGCTTAGTTACGTGGGCCAGTATAGTCAAAATGTGAGATGGATGCTTCTAGGTTATGTTGGTGAATCTGATGCAGGGCTTTTGGAGTTTTCAAAGGGTTGCCTTAGTCTGCAGAAACTAGAAATGAGGGGCTGTTGCTTCAGTGAGGGTGCACTGGCTGTTGCAGTGATGCAGCTGACTGCGCTAAGGTACTTGTGGGTGCAAGGGTACAGGGGATCCCCAACGGGTCGTGATCTTTTGGCAATGACTCGCCCGTATTGGAATATCGAGTTGATTCCTCCTAGACGAGTTGATGTTCTTGATCCGAACGGGGAGAAAGTAGTGGTTGAGCATCCAGCTCATATTCTTGCATACTACTCTCTTGCTGGACCAAGAACAGATTTTCCAAGTACTGTTATCCCCTTGGATCCAGAGTCTTTGATTAACGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_1 Abhydrolase_6 DNA_photolyase

Protein Analysis

597

Amino Acids

67.68

Weight (kDa)

5.71

Isoelectric Point (pI)

41.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box_5	PF18511	10 - 50	6.4e-22	F-box
Transp_inhibit	PF18791	70 - 115	8.7e-22	Transport inhibitor response 1 protein domain
DUF7885	PF25372	104 - 411	3.8e-07	Leucine Rich Repeat Domain of unknown function (DUF7885)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005426)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25290
fragaria_vesca	FvH4_7g27950 FvH4_7g27950 FvH4_7g27950
malus_domestica	MD01G1183500.v1.1 MD01G1183800.v1.1 MD01G1183900.v1.1 MD01G1184400.v1.1
prunus_persica	Prupe.2G280600_v2.0.a1
pyrus_communis	pycom01g19600
rosa_chinensis	RchiOBHm_Chr1g0374901
rosa_laevigata	RLG00000026708
rosa_multiflora	Rmu_co8417971.1_g000001 Rmu_sc0001849.1_g000083 Rmu_sc0003145.1_g000008 Rmu_sc0004947.1_g000034
rosa_roxburghii	Rroxscaffold_4G00283190 Rroxscaffold_7G00197970
rosa_rugosa	Rorug01G0385700 Rorug01G0385800
rosa_samantha	Rh1AG397300 Rh1BG361200 Rh1CG374800 Rh1DG392100 Rh1DG392200 Rh2AG349700 Rh5CG277500
rosa_wichuraiana	Rw1G006600 Rw1G035230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	455
AccBSI	CCGCTC	2 cut(s)	187, 245
AccI	GTMKAC	1 cut(s)	1158
AccII	CGCG	7 cut(s)	90, 134, 142, 144, 161, 388, 396
AccIII	TCCGGA	1 cut(s)	345
AciI	CCGC	7 cut(s)	88, 187, 199, 245, 388, 396, 469
AclWI	GGATC	8 cut(s)	612, 705, 906, 1572, 1585, 1658, 1763, 1776
AcoI	YGGCCR	1 cut(s)	397
AcsI	RAATTY	2 cut(s)	690, 737
AcuI	CTGAAG	4 cut(s)	242, 945, 1055, 1486
AcvI	CACGTG	1 cut(s)	151
AcyI	GRCGYC	2 cut(s)	93, 290
AfaI	GTAC	8 cut(s)	122, 576, 791, 937, 1148, 1553, 1571, 1753
AfiI	CCNNNNNNNGG	4 cut(s)	299, 961, 1141, 1345
AflII	CTTAAG	1 cut(s)	416
AgsI	TTSAA	4 cut(s)	331, 626, 947, 1455
AhdI	GACNNNNNGTC	1 cut(s)	97
AjnI	CCWGG	3 cut(s)	644, 1134, 1342
AloI	GAACNNNNNNTCC	2 cut(s)	1729, 1761
Alw21I	GWGCWC	6 cut(s)	150, 408, 434, 512, 1294, 1516
Alw26I	GTCTC	4 cut(s)	575, 968, 1024, 1247
Alw44I	GTGCAC	1 cut(s)	1512
AlwI	GGATC	8 cut(s)	612, 705, 906, 1572, 1585, 1658, 1763, 1776
Ama87I	CYCGRG	2 cut(s)	182, 578
Aor13HI	TCCGGA	1 cut(s)	345
AoxI	GGCC	3 cut(s)	397, 451, 1378
ApaLI	GTGCAC	1 cut(s)	1512
ApeKI	GCWGC	6 cut(s)	54, 208, 878, 881, 1131, 1534
ApoI	RAATTY	2 cut(s)	690, 737
ArsI	GACNNNNNNTTYG	4 cut(s)	481, 513, 805, 837
AspLEI	GCGC	5 cut(s)	136, 144, 163, 388, 1546
AspS9I	GGNCC	4 cut(s)	85, 489, 1378, 1730
AsuC2I	CCSGG	1 cut(s)	436
AsuHPI	GGTGA	2 cut(s)	551, 1436
AsuII	TTCGAA	1 cut(s)	1318
AvaI	CYCGRG	2 cut(s)	182, 578
AvaII	GGWCC	3 cut(s)	85, 489, 1730
BaeGI	GKGCMC	2 cut(s)	956, 1516
BamHI	GGATCC	2 cut(s)	1577, 1768
BanII	GRGCYC	3 cut(s)	408, 512, 1294
BbrPI	CACGTG	1 cut(s)	151
BbsI	GAAGAC	2 cut(s)	633, 933
Bbv12I	GWGCWC	6 cut(s)	150, 408, 434, 512, 1294, 1516
BbvI	GCAGC	6 cut(s)	41, 220, 868, 890, 1118, 1546
BccI	CCATC	4 cut(s)	164, 1082, 1108, 1395
BceAI	ACGGC	5 cut(s)	49, 80, 277, 384, 466
BciT130I	CCWGG	3 cut(s)	646, 1136, 1344
BclI	TGATCA	1 cut(s)	775
BcnI	CCSGG	1 cut(s)	436
BcoDI	GTCTC	4 cut(s)	575, 968, 1024, 1247
BfaI	CTAG	3 cut(s)	1412, 1481, 1644
BfmI	CTRYAG	2 cut(s)	475, 1472
BfrI	CTTAAG	1 cut(s)	416
BisI	GCNGC	9 cut(s)	55, 188, 209, 246, 397, 879, 882, 1132, 1535
BlsI	GCNGC	9 cut(s)	56, 189, 210, 247, 398, 880, 883, 1133, 1536
BmcAI	AGTACT	3 cut(s)	791, 1148, 1753
Bme1390I	CCNGG	4 cut(s)	436, 646, 1136, 1344
Bme18I	GGWCC	3 cut(s)	85, 489, 1730
BmeRI	GACNNNNNGTC	1 cut(s)	97
BmeT110I	CYCGRG	2 cut(s)	182, 578
BmgT120I	GGNCC	4 cut(s)	85, 489, 1378, 1730
BmiI	GGNNCC	5 cut(s)	203, 751, 1043, 1579, 1770
BmrFI	CCNGG	4 cut(s)	436, 646, 1136, 1344
BmsI	GCATC	7 cut(s)	51, 1190, 1295, 1395, 1423, 1521, 1702
BpiI	GAAGAC	2 cut(s)	633, 933
BplI	GAGNNNNNCTC	4 cut(s)	494, 526, 776, 808
BpmI	CTGGAG	1 cut(s)	1163
Bpu10I	CCTNAGC	2 cut(s)	191, 1547
Bpu14I	TTCGAA	1 cut(s)	1318
BpuEI	CTTGAG	3 cut(s)	197, 212, 992
BpuMI	CCSGG	1 cut(s)	436
Bsa29I	ATCGAT	1 cut(s)	763
BsaAI	YACGTR	3 cut(s)	151, 1162, 1375
BsaHI	GRCGYC	2 cut(s)	93, 290
BsaJI	CCNNGG	4 cut(s)	81, 293, 1343, 1764
BsaWI	WCCGGW	2 cut(s)	265, 345
BsaXI	ACNNNNNCTCC	6 cut(s)	163, 193, 270, 300, 416, 446
Bsc4I	CCNNNNNNNGG	4 cut(s)	299, 961, 1141, 1345
Bse118I	RCCGGY	1 cut(s)	50
Bse1I	ACTGG	4 cut(s)	34, 1146, 1381, 1521
Bse3DI	GCAATG	2 cut(s)	911, 1611
BseAI	TCCGGA	1 cut(s)	345
BseBI	CCWGG	3 cut(s)	646, 1136, 1344
BseCI	ATCGAT	1 cut(s)	763
BseDI	CCNNGG	4 cut(s)	81, 293, 1343, 1764
BseGI	GGATG	4 cut(s)	535, 1310, 1410, 1693
BseLI	CCNNNNNNNGG	4 cut(s)	299, 961, 1141, 1345
BseMI	GCAATG	2 cut(s)	911, 1611
BseMII	CTCAG	2 cut(s)	205, 807
BseNI	ACTGG	4 cut(s)	34, 1146, 1381, 1521
BseRI	GAGGAG	1 cut(s)	518
BseSI	GKGCMC	2 cut(s)	956, 1516
BseX3I	CGGCCG	1 cut(s)	397
BseXI	GCAGC	6 cut(s)	41, 220, 868, 890, 1118, 1546
Bsh1236I	CGCG	7 cut(s)	90, 134, 142, 144, 161, 388, 396
Bsh1285I	CGRYCG	1 cut(s)	400
BshFI	GGCC	3 cut(s)	399, 453, 1380
BshVI	ATCGAT	1 cut(s)	763
BsiEI	CGRYCG	1 cut(s)	400
BsiHKAI	GWGCWC	6 cut(s)	150, 408, 434, 512, 1294, 1516
BsiHKCI	CYCGRG	2 cut(s)	182, 578
BsiSI	CCGG	5 cut(s)	51, 205, 266, 346, 435
BslFI	GGGAC	1 cut(s)	1213
BslI	CCNNNNNNNGG	4 cut(s)	299, 961, 1141, 1345
BsmAI	GTCTC	4 cut(s)	575, 968, 1024, 1247
BsmBI	CGTCTC	1 cut(s)	1247
BsmFI	GGGAC	1 cut(s)	1213
BsnI	GGCC	3 cut(s)	399, 453, 1380
BsoBI	CYCGRG	2 cut(s)	182, 578
Bsp119I	TTCGAA	1 cut(s)	1318
Bsp1286I	GDGCHC	7 cut(s)	150, 408, 434, 512, 956, 1294, 1516
Bsp13I	TCCGGA	1 cut(s)	345
BspACI	CCGC	7 cut(s)	88, 187, 199, 245, 388, 396, 469
BspANI	GGCC	3 cut(s)	399, 453, 1380
BspCNI	CTCAG	2 cut(s)	204, 806
BspDI	ATCGAT	1 cut(s)	763
BspEI	TCCGGA	1 cut(s)	345
BspFNI	CGCG	7 cut(s)	90, 134, 142, 144, 161, 388, 396
BspLI	GGNNCC	5 cut(s)	203, 751, 1043, 1579, 1770
BspMAI	CTGCAG	2 cut(s)	479, 1476
BspPI	GGATC	8 cut(s)	612, 705, 906, 1572, 1585, 1658, 1763, 1776
BspT104I	TTCGAA	1 cut(s)	1318
BspTI	CTTAAG	1 cut(s)	416
BsrBI	CCGCTC	2 cut(s)	187, 245
BsrDI	GCAATG	2 cut(s)	911, 1611
BsrFI	RCCGGY	1 cut(s)	50
BsrI	ACTGG	4 cut(s)	34, 1146, 1381, 1521
BssAI	RCCGGY	1 cut(s)	50
BssECI	CCNNGG	4 cut(s)	81, 293, 1343, 1764
BssNI	GRCGYC	2 cut(s)	93, 290
BssT1I	CCWWGG	2 cut(s)	81, 1764
Bst2UI	CCWGG	3 cut(s)	646, 1136, 1344
Bst4CI	ACNGT	5 cut(s)	117, 574, 670, 1247, 1756
Bst6I	CTCTTC	2 cut(s)	1031, 1245
BstACI	GRCGYC	2 cut(s)	93, 290
BstAFI	CTTAAG	1 cut(s)	416
BstBAI	YACGTR	3 cut(s)	151, 1162, 1375
BstBI	TTCGAA	1 cut(s)	1318
BstC8I	GCNNGC	4 cut(s)	52, 146, 469, 558
BstDEI	CTNAG	5 cut(s)	191, 793, 1367, 1466, 1547
BstDSI	CCRYGG	1 cut(s)	293
BstF5I	GGATG	4 cut(s)	535, 1310, 1410, 1693
BstFNI	CGCG	7 cut(s)	90, 134, 142, 144, 161, 388, 396
BstHHI	GCGC	5 cut(s)	136, 144, 163, 388, 1546
BstMAI	GTCTC	4 cut(s)	575, 968, 1024, 1247
BstMCI	CGRYCG	1 cut(s)	400
BstMWI	GCNNNNNNNGC	8 cut(s)	133, 196, 205, 217, 385, 412, 553, 1543
BstNI	CCWGG	3 cut(s)	646, 1136, 1344
BstSCI	CCNGG	4 cut(s)	434, 644, 1134, 1342
BstSFI	CTRYAG	2 cut(s)	475, 1472
BstSLI	GKGCMC	2 cut(s)	956, 1516
BstSNI	TACGTA	1 cut(s)	1162
BstUI	CGCG	7 cut(s)	90, 134, 142, 144, 161, 388, 396
BstV1I	GCAGC	6 cut(s)	41, 220, 868, 890, 1118, 1546
BstV2I	GAAGAC	2 cut(s)	633, 933
BstX2I	RGATCY	5 cut(s)	604, 697, 898, 1577, 1768
BstYI	RGATCY	5 cut(s)	604, 697, 898, 1577, 1768
BstZI	CGGCCG	1 cut(s)	397
Bsu15I	ATCGAT	1 cut(s)	763
BsuRI	GGCC	3 cut(s)	399, 453, 1380
BsuTUI	ATCGAT	1 cut(s)	763
BtgI	CCRYGG	1 cut(s)	293
BtgZI	GCGATG	3 cut(s)	142, 263, 448
BtsCI	GGATG	4 cut(s)	535, 1310, 1410, 1693
BtsI	GCAGTG	2 cut(s)	803, 1533
BtsIMutI	CAGTG	7 cut(s)	570, 666, 803, 921, 1510, 1514, 1533
Cac8I	GCNNGC	4 cut(s)	52, 146, 469, 558
CfoI	GCGC	5 cut(s)	136, 144, 163, 388, 1546
Cfr10I	RCCGGY	1 cut(s)	50
Cfr13I	GGNCC	4 cut(s)	85, 489, 1378, 1730
ClaI	ATCGAT	1 cut(s)	763
CseI	GACGC	3 cut(s)	101, 140, 298
Csp6I	GTAC	8 cut(s)	121, 575, 790, 936, 1147, 1552, 1570, 1752
CviAII	CATG	2 cut(s)	551, 719
CviQI	GTAC	8 cut(s)	121, 575, 790, 936, 1147, 1552, 1570, 1752
DdeI	CTNAG	5 cut(s)	191, 793, 1367, 1466, 1547
DraI	TTTAAA	1 cut(s)	588
DrdI	GACNNNNNNGTC	1 cut(s)	455
DriI	GACNNNNNGTC	1 cut(s)	97
DseDI	GACNNNNNNGTC	1 cut(s)	455
EaeI	YGGCCR	1 cut(s)	397
EagI	CGGCCG	1 cut(s)	397
Eam1104I	CTCTTC	2 cut(s)	1031, 1245
Eam1105I	GACNNNNNGTC	1 cut(s)	97
EarI	CTCTTC	2 cut(s)	1031, 1245
Ecl136II	GAGCTC	3 cut(s)	406, 510, 1292
EclXI	CGGCCG	1 cut(s)	397
Eco105I	TACGTA	1 cut(s)	1162
Eco130I	CCWWGG	2 cut(s)	81, 1764
Eco24I	GRGCYC	3 cut(s)	408, 512, 1294
Eco32I	GATATC	1 cut(s)	1171
Eco47I	GGWCC	3 cut(s)	85, 489, 1730
Eco52I	CGGCCG	1 cut(s)	397
Eco53kI	GAGCTC	3 cut(s)	406, 510, 1292
Eco57I	CTGAAG	4 cut(s)	242, 945, 1055, 1486
Eco72I	CACGTG	1 cut(s)	151
Eco88I	CYCGRG	2 cut(s)	182, 578
EcoICRI	GAGCTC	3 cut(s)	406, 510, 1292
EcoO109I	RGGNCCY	1 cut(s)	489
EcoRII	CCWGG	3 cut(s)	644, 1134, 1342
EcoRV	GATATC	1 cut(s)	1171
EcoT14I	CCWWGG	2 cut(s)	81, 1764
EcoT22I	ATGCAT	2 cut(s)	913, 1183
EcoT38I	GRGCYC	3 cut(s)	408, 512, 1294
ErhI	CCWWGG	2 cut(s)	81, 1764
Esp3I	CGTCTC	1 cut(s)	1247
FaeI	CATG	2 cut(s)	554, 722
FalI	AAGNNNNNCTT	2 cut(s)	1312, 1344
FaqI	GGGAC	1 cut(s)	1213
FatI	CATG	2 cut(s)	550, 718
FauI	CCCGC	1 cut(s)	476
FbaI	TGATCA	1 cut(s)	775
FblI	GTMKAC	1 cut(s)	1158
Fnu4HI	GCNGC	9 cut(s)	55, 188, 209, 246, 397, 879, 882, 1132, 1535
FokI	GGATG	4 cut(s)	542, 1317, 1417, 1680
FriOI	GRGCYC	3 cut(s)	408, 512, 1294
Fsp4HI	GCNGC	9 cut(s)	55, 188, 209, 246, 397, 879, 882, 1132, 1535
FspBI	CTAG	3 cut(s)	1412, 1481, 1644
GlaI	GCGC	5 cut(s)	135, 143, 162, 387, 1545
GluI	GCNGC	9 cut(s)	55, 188, 209, 246, 397, 879, 882, 1132, 1535
GsuI	CTGGAG	1 cut(s)	1163
HaeIII	GGCC	3 cut(s)	399, 453, 1380
HapII	CCGG	5 cut(s)	51, 205, 266, 346, 435
HgaI	GACGC	3 cut(s)	101, 140, 298
HhaI	GCGC	5 cut(s)	136, 144, 163, 388, 1546
Hin1I	GRCGYC	2 cut(s)	93, 290
Hin1II	CATG	2 cut(s)	554, 722
Hin6I	GCGC	5 cut(s)	134, 142, 161, 386, 1544
HinP1I	GCGC	5 cut(s)	134, 142, 161, 386, 1544
HindIII	AAGCTT	1 cut(s)	1313
HpaII	CCGG	5 cut(s)	51, 205, 266, 346, 435
HphI	GGTGA	2 cut(s)	551, 1436
Hpy166II	GTNNAC	3 cut(s)	460, 1159, 1514
Hpy188III	TCNNGA	9 cut(s)	182, 193, 346, 580, 971, 1187, 1592, 1661, 1772
Hpy8I	GTNNAC	3 cut(s)	460, 1159, 1514
Hpy99I	CGWCG	3 cut(s)	95, 117, 178
HpyAV	CCTTC	3 cut(s)	325, 763, 1314
HpyCH4III	ACNGT	5 cut(s)	117, 574, 670, 1247, 1756
HpyCH4IV	ACGT	4 cut(s)	15, 150, 1161, 1374
HpyF10VI	GCNNNNNNNGC	8 cut(s)	133, 196, 205, 217, 385, 412, 553, 1543
HpyF3I	CTNAG	5 cut(s)	191, 793, 1367, 1466, 1547
HpySE526I	ACGT	4 cut(s)	15, 150, 1161, 1374
Hsp92I	GRCGYC	2 cut(s)	93, 290
Hsp92II	CATG	2 cut(s)	554, 722
HspAI	GCGC	5 cut(s)	134, 142, 161, 386, 1544
Kpn2I	TCCGGA	1 cut(s)	345
KroI	GCCGGC	1 cut(s)	50
KroNI	GCCGGC	1 cut(s)	52
Ksp22I	TGATCA	1 cut(s)	775
LmnI	GCTCC	4 cut(s)	376, 411, 437, 1047
Lsp1109I	GCAGC	6 cut(s)	41, 220, 868, 890, 1118, 1546
LweI	GCATC	7 cut(s)	51, 1190, 1295, 1395, 1423, 1521, 1702
MaeI	CTAG	3 cut(s)	1412, 1481, 1644
MaeII	ACGT	4 cut(s)	15, 150, 1161, 1374
MaeIII	GTNAC	4 cut(s)	151, 286, 390, 1370
MbiI	CCGCTC	2 cut(s)	187, 245
MflI	RGATCY	5 cut(s)	604, 697, 898, 1577, 1768
MhlI	GDGCHC	7 cut(s)	150, 408, 434, 512, 956, 1294, 1516
MluCI	AATT	7 cut(s)	516, 649, 675, 690, 737, 942, 1047
MlyI	GAGTC	6 cut(s)	71, 172, 323, 1195, 1603, 1784
MmeI	TCCRAC	2 cut(s)	393, 876
Mph1103I	ATGCAT	2 cut(s)	913, 1183
MroI	TCCGGA	1 cut(s)	345
MroNI	GCCGGC	1 cut(s)	50
MseI	TTAA	7 cut(s)	255, 321, 417, 587, 662, 941, 1785
MspA1I	CMGCKG	2 cut(s)	881, 1537
MspCI	CTTAAG	1 cut(s)	416
MspI	CCGG	5 cut(s)	51, 205, 266, 346, 435
MspR9I	CCNGG	4 cut(s)	436, 646, 1136, 1344
MvaI	CCWGG	3 cut(s)	646, 1136, 1344
MvnI	CGCG	7 cut(s)	90, 134, 142, 144, 161, 388, 396
MwoI	GCNNNNNNNGC	8 cut(s)	133, 196, 205, 217, 385, 412, 553, 1543
NaeI	GCCGGC	1 cut(s)	52
NciI	CCSGG	1 cut(s)	436
NgoMIV	GCCGGC	1 cut(s)	50
NlaIII	CATG	2 cut(s)	554, 722
NlaIV	GGNNCC	5 cut(s)	203, 751, 1043, 1579, 1770
NmeAIII	GCCGAG	2 cut(s)	264, 337
NmuCI	GTSAC	3 cut(s)	151, 286, 390
NsiI	ATGCAT	2 cut(s)	913, 1183
NspV	TTCGAA	1 cut(s)	1318
PaeR7I	CTCGAG	1 cut(s)	578
PdiI	GCCGGC	1 cut(s)	52
PfeI	GAWTC	4 cut(s)	365, 615, 1427, 1636
PkrI	GCNGC	9 cut(s)	56, 189, 210, 247, 398, 880, 883, 1133, 1536
PleI	GAGTC	6 cut(s)	71, 172, 322, 1195, 1603, 1783
PmaCI	CACGTG	1 cut(s)	151
PmlI	CACGTG	1 cut(s)	151
PpsI	GAGTC	6 cut(s)	71, 172, 322, 1195, 1603, 1783
Ppu21I	YACGTR	3 cut(s)	151, 1162, 1375
PpuMI	RGGWCCY	1 cut(s)	489
Psp124BI	GAGCTC	3 cut(s)	408, 512, 1294
Psp5II	RGGWCCY	1 cut(s)	489
Psp6I	CCWGG	3 cut(s)	644, 1134, 1342
PspCI	CACGTG	1 cut(s)	151
PspGI	CCWGG	3 cut(s)	644, 1134, 1342
PspN4I	GGNNCC	5 cut(s)	203, 751, 1043, 1579, 1770
PspPI	GGNCC	4 cut(s)	85, 489, 1378, 1730
PspPPI	RGGWCCY	1 cut(s)	489
PstI	CTGCAG	2 cut(s)	479, 1476
PsuI	RGATCY	5 cut(s)	604, 697, 898, 1577, 1768
PvuII	CAGCTG	2 cut(s)	881, 1537
RsaI	GTAC	8 cut(s)	122, 576, 791, 937, 1148, 1553, 1571, 1753
RsaNI	GTAC	8 cut(s)	121, 575, 790, 936, 1147, 1552, 1570, 1752
SacI	GAGCTC	3 cut(s)	408, 512, 1294
SaqAI	TTAA	7 cut(s)	255, 321, 417, 587, 662, 941, 1785
SatI	GCNGC	9 cut(s)	55, 188, 209, 246, 397, 879, 882, 1132, 1535
Sau96I	GGNCC	4 cut(s)	85, 489, 1378, 1730
ScaI	AGTACT	3 cut(s)	791, 1148, 1753
SchI	GAGTC	6 cut(s)	71, 172, 323, 1195, 1603, 1784
ScrFI	CCNGG	4 cut(s)	436, 646, 1136, 1344
SduI	GDGCHC	7 cut(s)	150, 408, 434, 512, 956, 1294, 1516
SfaNI	GCATC	7 cut(s)	51, 1190, 1295, 1395, 1423, 1521, 1702
SfcI	CTRYAG	2 cut(s)	475, 1472
Sfr274I	CTCGAG	1 cut(s)	578
SfuI	TTCGAA	1 cut(s)	1318
SinI	GGWCC	3 cut(s)	85, 489, 1730
SlaI	CTCGAG	1 cut(s)	578
SmlI	CTYRAG	5 cut(s)	212, 227, 416, 578, 971
SmoI	CTYRAG	5 cut(s)	212, 227, 416, 578, 971
SnaBI	TACGTA	1 cut(s)	1162
Sse9I	AATT	7 cut(s)	516, 649, 675, 690, 737, 942, 1047
SsiI	CCGC	7 cut(s)	88, 187, 199, 245, 388, 396, 469
SspMI	CTAG	3 cut(s)	1412, 1481, 1644
SstI	GAGCTC	3 cut(s)	408, 512, 1294
StyD4I	CCNGG	4 cut(s)	434, 644, 1134, 1342
StyI	CCWWGG	2 cut(s)	81, 1764
TaaI	ACNGT	5 cut(s)	117, 574, 670, 1247, 1756
TaiI	ACGT	4 cut(s)	18, 153, 1164, 1377
TasI	AATT	7 cut(s)	516, 649, 675, 690, 737, 942, 1047
TatI	WGTACW	5 cut(s)	574, 789, 935, 1146, 1751
TauI	GCSGC	3 cut(s)	190, 248, 399
TfiI	GAWTC	4 cut(s)	365, 615, 1427, 1636
Tru1I	TTAA	7 cut(s)	255, 321, 417, 587, 662, 941, 1785
Tru9I	TTAA	7 cut(s)	255, 321, 417, 587, 662, 941, 1785
TscAI	CASTG	7 cut(s)	577, 673, 810, 928, 1510, 1521, 1533
TseFI	GTSAC	3 cut(s)	151, 286, 390
TseI	GCWGC	6 cut(s)	54, 208, 878, 881, 1131, 1534
Tsp45I	GTSAC	3 cut(s)	151, 286, 390
TspDTI	ATGAA	2 cut(s)	38, 867
TspGWI	ACGGA	3 cut(s)	617, 704, 1328
TspRI	CASTG	7 cut(s)	577, 673, 810, 928, 1510, 1521, 1533
Vha464I	CTTAAG	1 cut(s)	416
VneI	GTGCAC	1 cut(s)	1512
VpaK11BI	GGWCC	3 cut(s)	85, 489, 1730
XapI	RAATTY	2 cut(s)	690, 737
XhoI	CTCGAG	1 cut(s)	578
XmiI	GTMKAC	1 cut(s)	1158
XspI	CTAG	3 cut(s)	1412, 1481, 1644
ZrmI	AGTACT	3 cut(s)	791, 1148, 1753
Zsp2I	ATGCAT	2 cut(s)	913, 1183

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.