Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0003381

Physical Location & Seq

Genomic Coordinates Forward (+)

30021140 .. 30026019

Gene Structure 4880 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1204600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGGCGACTGTGACTGCAACGTGCTCTCCGAGCTCCCTCCAGATTCGCTTAGCTTTCAATTGCGGCAATTGCTGTAAACCCTCCTCCGTTCTCGTACGGTGGCGACTGGGGAAGCTCGATCATCGGGCTCGAGTGCTCTGCGTTGCTCAAGGCAGTGAGAGGTCCGGGAGTGGATTGGAGCCCCGTCGCAATGGGGGTTCGTGGGTCGGGTCGAACTCGATCGCTGACGGGTTTAAAGGGTGGTCCGATTCGGATAATGGGGAAGAGTCATTGGACTCGCAGAGGAAGAAATGGTTTGGAGGGACTGTGGGAGCTGGAGTTGCCGGAGTCGTTCTTGTTGCGGGGCTTACTTTTGCAGCATTGTCTTTTGGAAAACGAAACAATTTGAGCCCAAAACAACAGATGGAGCCATTAACGACGCAGCAGGAGCGGTCTTTGACTTATGATGATGACAATGAGAGGAGTACAGAAGATGTGGATGATCAAAGCAATGTGAAGCATGATGCTAATAGTAGTCCGGAAGAAAGGACAGCTCTACAGGTGGTTCCTGGAAAGGTTTTGGTTCCGGCAGTTGTTGATCAGGTCCAGGGGCAGGCATTAGCAGCGCTGCAAGTGTTAAAGGTCATAGAGGCTGATGTTCAACCTGGTGATTTGTGTACACGGCGTGAATATGCCCGTTGGTTGGTTTTTGCAAGTAGTGCTCTTTCAAGGAACTCAATCTCTAAAATATATCCTGCTATGTATATTGAGAATGTTACTGAGCTTGCATTTGATGATATTACACCTGAAGACCCTGATTTCCCATCCATTCAAGGTTTGGCTGAAGCAGGACTTATCTCAAGCAAGCTGTCAAGAAATGATATGTTTTCTTCCTTGGATGAAAATGAAAGTTCATTTTACTTCTCTCCTGAAAGCCCTCTATCACGCCAGGATCTTGTAAGTTGGAAGATGGCCCTAGAGAAAAGACATCTCCCAAAAGCCGACAAGGAGGTCCTCTACCAAATTTCTGGTTTTATAGACGCTGATAAGATACATCCAGATGCATGTCCTGCACTTGTTGCTGACCTATCTGGGGAACAGGGTATTATTGCTCTTGCATTTGGTTACACCAGACTCTTCCAGCCGGATAAGCCAGTAACAAAAGCCCAGGCTGCTATTGCCCTTGCAACTGGAGAGTATTCAGACTCGGTGAGTGAGGAGCTTGCACGTATTGAAGCAGAATCTATAGCAGAAAATGCTGTGGAGGCACATAATGCTTTAGTGGCCGAAGTTGAAAGGGATGTGAACGCAAATTTTGAGAAGGATCTTTCCATGGAGAGGGAAAAAATTGATGCTGTGGAGAAAATGGCTGAAGAAGCAAGACGTGAATTGGAAAGGTTAAGATCCGAGAGAGCGGAAGATAATATTGCCTTGATGAAAGAACGTGCAGCTGTTGAATCAGAAATGGAAGTTCTGTCCAAGTTAAGGCATGAGGTGGAGGAACAGTTGCAGAGCCTAATGAGTAACAAAGCAGAGATATCCTATGAAAAAGAAAGAATTAGCAAACTTAGGACTGAAGCAGAAACCGAAAGCCAGGAGATTGCACGCCTACAGCATGATCTAGAGGTTGAACGGAAAGCCTTGTCCATGGCCAGGGCTTGGGCTGAAGATGAGGCAAAAAGAGCAAGAGAACATGCTAAAGTACTCGAGGAGGCTAGAGATCGCTGGGAGAGGCAGGGCATCAAGGTAGTTGTTGACAATGACCTCCGAGAAGATACCTTGGGTGAGGCTACATGGCTCGAGGCTGGCAAGCAGTTCTCGGTTGAAGGAGCTGTCAGCAGGGCGGAGAATTTGATGCATAAGCTTAAGGCACTAGCAACAAATATAAAAGGGAAATCCCGAGATATAATCGATCAGATCATCCAAAAGATAGCCTTGCTCATATCCAATTTGAGGGAGTGGATCCCCAAGGCAGGAAAAGGGGCTGCAGAACTAAAAGACGCCGCCATTTCAAAGGCCAGTAGATCAGCCCAAGAGTTGCAGCAAAGCACATCGGAGTTTAGCTTGGCCGTCAAAGAAGGTGCCAAGCGTGTCGCTGAAGATTGTAGGGAAGGAGTGGGGAAACTCACTCAGAAGTTTAAGACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SLH

Protein Analysis

709

Amino Acids

78.28

Weight (kDa)

5.13

Isoelectric Point (pI)

52.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003381)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23890 AT5G23890 AT5G52410 AT5G52410 AT5G52410
fragaria_vesca	FvH4_7g29760 FvH4_7g29760 FvH4_7g29760 FvH4_7g29760 FvH4_7g29760 FvH4_7g29760
malus_domestica	MD01G1204600.v1.1 MD07G1273100.v1.1
prunus_persica	Prupe.2G296700_v2.0.a1 Prupe.2G296700_v2.0.a1 Prupe.2G296700_v2.0.a1 Prupe.2G296700_v2.0.a1
pyrus_communis	pycom01g21410 pycom07g24950 pycom07g24960
rosa_chinensis	RchiOBHm_Chr1g0377741
rosa_laevigata	RLG00000026502
rosa_multiflora	Rmu_co7992088.1_g000001 Rmu_co8121168.1_g000001 Rmu_co8359937.1_g000001 Rmu_sc0005758.1_g000001 Rmu_sc0040285.1_g000001
rosa_roxburghii	Rroxscaffold_4G00281100
rosa_rugosa	Rorug01G0404500 Rorug01G0404500 Rorug01G0404500
rosa_samantha	Rh1AG427700 Rh1BG381600 Rh1CG395500 Rh1DG412600
rosa_wichuraiana	Rw1G037080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	989
AccB1I	GGYRCC	1 cut(s)	2060
AccB7I	CCANNNNNTGG	1 cut(s)	1638
AccBSI	CCGCTC	2 cut(s)	430, 1394
AccIII	TCCGGA	1 cut(s)	517
AciI	CCGC	6 cut(s)	63, 341, 430, 1394, 1823, 1983
AclWI	GGATC	5 cut(s)	939, 1311, 1377, 1936, 1949
AcoI	YGGCCR	3 cut(s)	1263, 1629, 2046
AcsI	RAATTY	3 cut(s)	1002, 1291, 1828
AcuI	CTGAAG	6 cut(s)	807, 843, 1371, 1575, 1665, 2097
AcyI	GRCGYC	1 cut(s)	1980
AdeI	CACNNNGTG	1 cut(s)	665
AfaI	GTAC	4 cut(s)	96, 466, 658, 1683
AfeI	AGCGCT	1 cut(s)	606
AfiI	CCNNNNNNNGG	9 cut(s)	592, 682, 1072, 1317, 1464, 1632, 1638, 1932, 1952
AflII	CTTAAG	1 cut(s)	1844
AjiI	CACGTC	2 cut(s)	1364, 2124
AjnI	CCWGG	7 cut(s)	547, 585, 643, 927, 1146, 1572, 1631
Alw21I	GWGCWC	4 cut(s)	26, 35, 138, 703
AlwI	GGATC	5 cut(s)	939, 1311, 1377, 1936, 1949
Ama87I	CYCGRG	4 cut(s)	129, 1685, 1778, 1878
Aor13HI	TCCGGA	1 cut(s)	517
Aor51HI	AGCGCT	1 cut(s)	606
AoxI	GGCC	5 cut(s)	951, 1263, 1629, 1995, 2046
ApeKI	GCWGC	8 cut(s)	356, 421, 602, 607, 1151, 1427, 1964, 2020
ApoI	RAATTY	3 cut(s)	1002, 1291, 1828
AspLEI	GCGC	1 cut(s)	607
AspS9I	GGNCC	5 cut(s)	162, 243, 583, 952, 991
AsuC2I	CCSGG	1 cut(s)	166
AsuHPI	GGTGA	3 cut(s)	659, 1201, 1775
AvaI	CYCGRG	4 cut(s)	129, 1685, 1778, 1878
AvaII	GGWCC	4 cut(s)	162, 243, 583, 991
BalI	TGGCCA	1 cut(s)	1631
BamHI	GGATCC	1 cut(s)	1941
BanI	GGYRCC	1 cut(s)	2060
BanII	GRGCYC	4 cut(s)	35, 130, 183, 392
BbsI	GAAGAC	1 cut(s)	795
Bbv12I	GWGCWC	4 cut(s)	26, 35, 138, 703
BbvI	GCAGC	8 cut(s)	368, 433, 594, 614, 1138, 1439, 1951, 2032
BccI	CCATC	3 cut(s)	397, 811, 943
BceAI	ACGGC	2 cut(s)	677, 2033
BcgI	CGANNNNNNTGC	2 cut(s)	120, 154
BciT130I	CCWGG	7 cut(s)	549, 587, 645, 929, 1148, 1574, 1633
BclI	TGATCA	2 cut(s)	481, 577
BcnI	CCSGG	1 cut(s)	166
BfaI	CTAG	4 cut(s)	956, 1601, 1695, 1853
BfmI	CTRYAG	4 cut(s)	536, 1224, 1589, 1965
BfoI	RGCGCY	1 cut(s)	608
BfrI	CTTAAG	1 cut(s)	1844
BlpI	GCTNAGC	1 cut(s)	49
BmcAI	AGTACT	1 cut(s)	1683
Bme1390I	CCNGG	8 cut(s)	166, 549, 587, 645, 929, 1148, 1574, 1633
Bme18I	GGWCC	4 cut(s)	162, 243, 583, 991
BmeT110I	CYCGRG	4 cut(s)	129, 1685, 1778, 1878
BmgBI	CACGTC	2 cut(s)	1364, 2124
BmgT120I	GGNCC	5 cut(s)	162, 243, 583, 952, 991
BmiI	GGNNCC	6 cut(s)	180, 408, 546, 564, 1943, 2062
BmrFI	CCNGG	8 cut(s)	166, 549, 587, 645, 929, 1148, 1574, 1633
BmrI	ACTGGG	1 cut(s)	116
BmsI	GCATC	5 cut(s)	493, 1030, 1321, 1728, 1824
BmuI	ACTGGG	1 cut(s)	116
BpiI	GAAGAC	1 cut(s)	795
BpmI	CTGGAG	3 cut(s)	23, 336, 1191
Bpu1102I	GCTNAGC	1 cut(s)	49
BpuEI	CTTGAG	2 cut(s)	132, 823
BpuMI	CCSGG	1 cut(s)	166
Bsa29I	ATCGAT	1 cut(s)	1890
BsaAI	YACGTR	1 cut(s)	1208
BsaHI	GRCGYC	1 cut(s)	1980
BsaJI	CCNNGG	8 cut(s)	586, 873, 1146, 1311, 1626, 1632, 1758, 1947
BsaWI	WCCGGW	1 cut(s)	517
BsaXI	ACNNNNNCTCC	8 cut(s)	10, 40, 291, 303, 321, 333, 1469, 1499
Bsc4I	CCNNNNNNNGG	9 cut(s)	592, 682, 1072, 1317, 1464, 1632, 1638, 1932, 1952
Bse1I	ACTGG	4 cut(s)	111, 1133, 1174, 1998
Bse3DI	GCAATG	2 cut(s)	196, 496
BseAI	TCCGGA	1 cut(s)	517
BseBI	CCWGG	7 cut(s)	549, 587, 645, 929, 1148, 1574, 1633
BseCI	ATCGAT	1 cut(s)	1890
BseDI	CCNNGG	8 cut(s)	586, 873, 1146, 1311, 1626, 1632, 1758, 1947
BseGI	GGATG	6 cut(s)	484, 803, 883, 1033, 1285, 1899
BseLI	CCNNNNNNNGG	9 cut(s)	592, 682, 1072, 1317, 1464, 1632, 1638, 1932, 1952
BseMI	GCAATG	2 cut(s)	196, 496
BseMII	CTCAG	2 cut(s)	750, 2123
BseNI	ACTGG	4 cut(s)	111, 1133, 1174, 1998
BseRI	GAGGAG	4 cut(s)	73, 475, 1211, 1703
BseXI	GCAGC	8 cut(s)	368, 433, 594, 614, 1138, 1439, 1951, 2032
BseYI	CCCAGC	1 cut(s)	1704
BsgI	GTGCAG	2 cut(s)	1035, 1446
Bsh1285I	CGRYCG	1 cut(s)	222
BshFI	GGCC	5 cut(s)	953, 1265, 1631, 1997, 2048
BshNI	GGYRCC	1 cut(s)	2060
BshVI	ATCGAT	1 cut(s)	1890
BsiEI	CGRYCG	1 cut(s)	222
BsiHKAI	GWGCWC	4 cut(s)	26, 35, 138, 703
BsiHKCI	CYCGRG	4 cut(s)	129, 1685, 1778, 1878
BsiSI	CCGG	5 cut(s)	165, 324, 518, 566, 1124
BsiWI	CGTACG	1 cut(s)	94
BslFI	GGGAC	1 cut(s)	316
BslI	CCNNNNNNNGG	9 cut(s)	592, 682, 1072, 1317, 1464, 1632, 1638, 1932, 1952
BsmFI	GGGAC	1 cut(s)	316
BsnI	GGCC	5 cut(s)	953, 1265, 1631, 1997, 2048
BsoBI	CYCGRG	4 cut(s)	129, 1685, 1778, 1878
Bsp1286I	GDGCHC	7 cut(s)	26, 35, 130, 138, 183, 392, 703
Bsp13I	TCCGGA	1 cut(s)	517
Bsp1407I	TGTACA	1 cut(s)	656
Bsp1720I	GCTNAGC	1 cut(s)	49
Bsp19I	CCATGG	2 cut(s)	1311, 1626
BspACI	CCGC	6 cut(s)	63, 341, 430, 1394, 1823, 1983
BspANI	GGCC	5 cut(s)	953, 1265, 1631, 1997, 2048
BspCNI	CTCAG	2 cut(s)	751, 2122
BspDI	ATCGAT	1 cut(s)	1890
BspEI	TCCGGA	1 cut(s)	517
BspLI	GGNNCC	6 cut(s)	180, 408, 546, 564, 1943, 2062
BspMAI	CTGCAG	1 cut(s)	1969
BspPI	GGATC	5 cut(s)	939, 1311, 1377, 1936, 1949
BspT107I	GGYRCC	1 cut(s)	2060
BspTI	CTTAAG	1 cut(s)	1844
BsrBI	CCGCTC	2 cut(s)	430, 1394
BsrDI	GCAATG	2 cut(s)	196, 496
BsrGI	TGTACA	1 cut(s)	656
BsrI	ACTGG	4 cut(s)	111, 1133, 1174, 1998
BssECI	CCNNGG	8 cut(s)	586, 873, 1146, 1311, 1626, 1632, 1758, 1947
BssNI	GRCGYC	1 cut(s)	1980
BssT1I	CCWWGG	5 cut(s)	873, 1311, 1626, 1758, 1947
Bst2UI	CCWGG	7 cut(s)	549, 587, 645, 929, 1148, 1574, 1633
Bst4CI	ACNGT	4 cut(s)	10, 99, 307, 1485
Bst6I	CTCTTC	2 cut(s)	258, 1121
BstACI	GRCGYC	1 cut(s)	1980
BstAFI	CTTAAG	1 cut(s)	1844
BstAPI	GCANNNNNTGC	5 cut(s)	698, 1049, 1058, 1235, 1253
BstAUI	TGTACA	1 cut(s)	656
BstBAI	YACGTR	1 cut(s)	1208
BstC8I	GCNNGC	7 cut(s)	594, 765, 845, 1203, 1585, 1786, 1790
BstDEI	CTNAG	4 cut(s)	49, 759, 1547, 2109
BstDSI	CCRYGG	2 cut(s)	1311, 1626
BstF5I	GGATG	6 cut(s)	484, 803, 883, 1033, 1285, 1899
BstH2I	RGCGCY	1 cut(s)	608
BstHHI	GCGC	1 cut(s)	607
BstMCI	CGRYCG	1 cut(s)	222
BstNI	CCWGG	7 cut(s)	549, 587, 645, 929, 1148, 1574, 1633
BstNSI	RCATGY	2 cut(s)	1047, 1676
BstSCI	CCNGG	8 cut(s)	164, 547, 585, 643, 927, 1146, 1572, 1631
BstSFI	CTRYAG	4 cut(s)	536, 1224, 1589, 1965
BstV1I	GCAGC	8 cut(s)	368, 433, 594, 614, 1138, 1439, 1951, 2032
BstV2I	GAAGAC	1 cut(s)	795
BstX2I	RGATCY	4 cut(s)	931, 1303, 1382, 1941
BstXI	CCANNNNNNTGG	1 cut(s)	1007
BstYI	RGATCY	4 cut(s)	931, 1303, 1382, 1941
Bsu15I	ATCGAT	1 cut(s)	1890
BsuRI	GGCC	5 cut(s)	953, 1265, 1631, 1997, 2048
BsuTUI	ATCGAT	1 cut(s)	1890
BtgI	CCRYGG	2 cut(s)	1311, 1626
BtrI	CACGTC	2 cut(s)	1364, 2124
BtsCI	GGATG	6 cut(s)	484, 803, 883, 1033, 1285, 1899
BtsI	GCAGTG	1 cut(s)	160
BtsIMutI	CAGTG	1 cut(s)	160
Cac8I	GCNNGC	7 cut(s)	594, 765, 845, 1203, 1585, 1786, 1790
CfoI	GCGC	1 cut(s)	607
Cfr13I	GGNCC	5 cut(s)	162, 243, 583, 952, 991
ClaI	ATCGAT	1 cut(s)	1890
CseI	GACGC	3 cut(s)	427, 1028, 1988
CsiI	ACCWGGT	1 cut(s)	643
Csp6I	GTAC	4 cut(s)	95, 465, 657, 1682
CviAII	CATG	8 cut(s)	500, 1044, 1312, 1469, 1595, 1627, 1673, 1773
CviQI	GTAC	4 cut(s)	95, 465, 657, 1682
DdeI	CTNAG	4 cut(s)	49, 759, 1547, 2109
DraI	TTTAAA	1 cut(s)	235
DraIII	CACNNNGTG	1 cut(s)	665
DrdI	GACNNNNNNGTC	1 cut(s)	989
DseDI	GACNNNNNNGTC	1 cut(s)	989
EaeI	YGGCCR	3 cut(s)	1263, 1629, 2046
Eam1104I	CTCTTC	2 cut(s)	258, 1121
EarI	CTCTTC	2 cut(s)	258, 1121
EciI	GGCGGA	1 cut(s)	1838
Ecl136II	GAGCTC	1 cut(s)	33
Eco130I	CCWWGG	5 cut(s)	873, 1311, 1626, 1758, 1947
Eco24I	GRGCYC	4 cut(s)	35, 130, 183, 392
Eco32I	GATATC	1 cut(s)	1518
Eco47I	GGWCC	4 cut(s)	162, 243, 583, 991
Eco47III	AGCGCT	1 cut(s)	606
Eco53kI	GAGCTC	1 cut(s)	33
Eco57I	CTGAAG	6 cut(s)	807, 843, 1371, 1575, 1665, 2097
Eco88I	CYCGRG	4 cut(s)	129, 1685, 1778, 1878
EcoICRI	GAGCTC	1 cut(s)	33
EcoO109I	RGGNCCY	1 cut(s)	991
EcoRII	CCWGG	7 cut(s)	547, 585, 643, 927, 1146, 1572, 1631
EcoRV	GATATC	1 cut(s)	1518
EcoT14I	CCWWGG	5 cut(s)	873, 1311, 1626, 1758, 1947
EcoT22I	ATGCAT	2 cut(s)	1045, 1839
EcoT38I	GRGCYC	4 cut(s)	35, 130, 183, 392
ErhI	CCWWGG	5 cut(s)	873, 1311, 1626, 1758, 1947
FaeI	CATG	8 cut(s)	503, 1047, 1315, 1472, 1598, 1630, 1676, 1776
FalI	AAGNNNNNCTT	4 cut(s)	816, 848, 1898, 1930
FaqI	GGGAC	1 cut(s)	316
FatI	CATG	8 cut(s)	499, 1043, 1311, 1468, 1594, 1626, 1672, 1772
FauI	CCCGC	1 cut(s)	334
FbaI	TGATCA	2 cut(s)	481, 577
FokI	GGATG	6 cut(s)	491, 790, 890, 1020, 1292, 1886
FriOI	GRGCYC	4 cut(s)	35, 130, 183, 392
FspBI	CTAG	4 cut(s)	956, 1601, 1695, 1853
GlaI	GCGC	1 cut(s)	606
GsaI	CCCAGC	1 cut(s)	1708
GsuI	CTGGAG	3 cut(s)	23, 336, 1191
HaeII	RGCGCY	1 cut(s)	608
HaeIII	GGCC	5 cut(s)	953, 1265, 1631, 1997, 2048
HapII	CCGG	5 cut(s)	165, 324, 518, 566, 1124
HgaI	GACGC	3 cut(s)	427, 1028, 1988
HhaI	GCGC	1 cut(s)	607
Hin1I	GRCGYC	1 cut(s)	1980
Hin1II	CATG	8 cut(s)	503, 1047, 1315, 1472, 1598, 1630, 1676, 1776
Hin6I	GCGC	1 cut(s)	605
HinP1I	GCGC	1 cut(s)	605
HincII	GTYRAC	1 cut(s)	1735
HindII	GTYRAC	1 cut(s)	1735
HindIII	AAGCTT	1 cut(s)	1841
HinfI	GANTC	9 cut(s)	43, 248, 266, 275, 327, 1113, 1184, 1220, 1436
HpaII	CCGG	5 cut(s)	165, 324, 518, 566, 1124
HphI	GGTGA	3 cut(s)	659, 1201, 1775
Hpy166II	GTNNAC	5 cut(s)	77, 657, 659, 1285, 1735
Hpy188III	TCNNGA	7 cut(s)	40, 518, 852, 908, 1037, 1601, 1878
Hpy8I	GTNNAC	5 cut(s)	77, 657, 659, 1285, 1735
Hpy99I	CGWCG	2 cut(s)	189, 421
HpyAV	CCTTC	4 cut(s)	1294, 1799, 2051, 2084
HpyCH4III	ACNGT	4 cut(s)	10, 99, 307, 1485
HpyCH4IV	ACGT	5 cut(s)	20, 1207, 1363, 1423, 2123
HpyF3I	CTNAG	4 cut(s)	49, 759, 1547, 2109
HpySE526I	ACGT	5 cut(s)	20, 1207, 1363, 1423, 2123
Hsp92I	GRCGYC	1 cut(s)	1980
Hsp92II	CATG	8 cut(s)	503, 1047, 1315, 1472, 1598, 1630, 1676, 1776
HspAI	GCGC	1 cut(s)	605
Kpn2I	TCCGGA	1 cut(s)	517
Ksp22I	TGATCA	2 cut(s)	481, 577
LmnI	GCTCC	7 cut(s)	38, 178, 311, 406, 427, 1198, 1808
Lsp1109I	GCAGC	8 cut(s)	368, 433, 594, 614, 1138, 1439, 1951, 2032
LweI	GCATC	5 cut(s)	493, 1030, 1321, 1728, 1824
MabI	ACCWGGT	1 cut(s)	643
MaeI	CTAG	4 cut(s)	956, 1601, 1695, 1853
MaeII	ACGT	5 cut(s)	20, 1207, 1363, 1423, 2123
MaeIII	GTNAC	5 cut(s)	10, 754, 1103, 1135, 1502
MbiI	CCGCTC	2 cut(s)	430, 1394
MfeI	CAATTG	2 cut(s)	58, 67
MflI	RGATCY	4 cut(s)	931, 1303, 1382, 1941
MhlI	GDGCHC	7 cut(s)	26, 35, 130, 138, 183, 392, 703
MlsI	TGGCCA	1 cut(s)	1631
MluNI	TGGCCA	1 cut(s)	1631
MlyI	GAGTC	5 cut(s)	269, 275, 336, 1107, 1178
MmeI	TCCRAC	1 cut(s)	923
Mox20I	TGGCCA	1 cut(s)	1631
Mph1103I	ATGCAT	2 cut(s)	1045, 1839
MroI	TCCGGA	1 cut(s)	517
MscI	TGGCCA	1 cut(s)	1631
MseI	TTAA	7 cut(s)	234, 413, 617, 1379, 1463, 1845, 2118
MslI	CAYNNNNRTG	1 cut(s)	1038
Msp20I	TGGCCA	1 cut(s)	1631
MspA1I	CMGCKG	1 cut(s)	1430
MspCI	CTTAAG	1 cut(s)	1844
MspI	CCGG	5 cut(s)	165, 324, 518, 566, 1124
MspR9I	CCNGG	8 cut(s)	166, 549, 587, 645, 929, 1148, 1574, 1633
MunI	CAATTG	2 cut(s)	58, 67
MvaI	CCWGG	7 cut(s)	549, 587, 645, 929, 1148, 1574, 1633
NciI	CCSGG	1 cut(s)	166
NcoI	CCATGG	2 cut(s)	1311, 1626
NlaIII	CATG	8 cut(s)	503, 1047, 1315, 1472, 1598, 1630, 1676, 1776
NlaIV	GGNNCC	6 cut(s)	180, 408, 546, 564, 1943, 2062
NmuCI	GTSAC	1 cut(s)	10
NsiI	ATGCAT	2 cut(s)	1045, 1839
NspI	RCATGY	2 cut(s)	1047, 1676
PaeR7I	CTCGAG	3 cut(s)	129, 1685, 1778
PcsI	WCGNNNNNNNCGW	1 cut(s)	26
PfeI	GAWTC	4 cut(s)	43, 248, 1220, 1436
Pfl23II	CGTACG	1 cut(s)	94
PflMI	CCANNNNNTGG	1 cut(s)	1638
PfoI	TCCNGGA	2 cut(s)	164, 547
Ple19I	CGATCG	1 cut(s)	222
PleI	GAGTC	5 cut(s)	269, 274, 335, 1107, 1178
PpsI	GAGTC	5 cut(s)	269, 274, 335, 1107, 1178
Ppu21I	YACGTR	1 cut(s)	1208
PpuMI	RGGWCCY	1 cut(s)	991
Psp124BI	GAGCTC	1 cut(s)	35
Psp5II	RGGWCCY	1 cut(s)	991
Psp6I	CCWGG	7 cut(s)	547, 585, 643, 927, 1146, 1572, 1631
PspFI	CCCAGC	1 cut(s)	1704
PspGI	CCWGG	7 cut(s)	547, 585, 643, 927, 1146, 1572, 1631
PspLI	CGTACG	1 cut(s)	94
PspN4I	GGNNCC	6 cut(s)	180, 408, 546, 564, 1943, 2062
PspPI	GGNCC	5 cut(s)	162, 243, 583, 952, 991
PspPPI	RGGWCCY	1 cut(s)	991
PspXI	VCTCGAGB	3 cut(s)	129, 1685, 1778
PstI	CTGCAG	1 cut(s)	1969
PsuI	RGATCY	4 cut(s)	931, 1303, 1382, 1941
PvuI	CGATCG	1 cut(s)	222
PvuII	CAGCTG	1 cut(s)	1430
RsaI	GTAC	4 cut(s)	96, 466, 658, 1683
RsaNI	GTAC	4 cut(s)	95, 465, 657, 1682
RseI	CAYNNNNRTG	1 cut(s)	1038
SacI	GAGCTC	1 cut(s)	35
SaqAI	TTAA	7 cut(s)	234, 413, 617, 1379, 1463, 1845, 2118
Sau96I	GGNCC	5 cut(s)	162, 243, 583, 952, 991
ScaI	AGTACT	1 cut(s)	1683
SchI	GAGTC	5 cut(s)	269, 275, 336, 1107, 1178
ScrFI	CCNGG	8 cut(s)	166, 549, 587, 645, 929, 1148, 1574, 1633
SduI	GDGCHC	7 cut(s)	26, 35, 130, 138, 183, 392, 703
SexAI	ACCWGGT	1 cut(s)	643
SfaNI	GCATC	5 cut(s)	493, 1030, 1321, 1728, 1824
SfcI	CTRYAG	4 cut(s)	536, 1224, 1589, 1965
Sfr274I	CTCGAG	3 cut(s)	129, 1685, 1778
SinI	GGWCC	4 cut(s)	162, 243, 583, 991
SlaI	CTCGAG	3 cut(s)	129, 1685, 1778
SmiMI	CAYNNNNRTG	1 cut(s)	1038
SmlI	CTYRAG	6 cut(s)	129, 147, 838, 1685, 1778, 1844
SmoI	CTYRAG	6 cut(s)	129, 147, 838, 1685, 1778, 1844
SsiI	CCGC	6 cut(s)	63, 341, 430, 1394, 1823, 1983
SspI	AATATT	1 cut(s)	1405
SspMI	CTAG	4 cut(s)	956, 1601, 1695, 1853
SstI	GAGCTC	1 cut(s)	35
StyD4I	CCNGG	8 cut(s)	164, 547, 585, 643, 927, 1146, 1572, 1631
StyI	CCWWGG	5 cut(s)	873, 1311, 1626, 1758, 1947
TaaI	ACNGT	4 cut(s)	10, 99, 307, 1485
TaiI	ACGT	5 cut(s)	23, 1210, 1366, 1426, 2126
TaqI	TCGA	7 cut(s)	117, 130, 212, 218, 1686, 1779, 1890
TatI	WGTACW	3 cut(s)	464, 656, 1681
TauI	GCSGC	2 cut(s)	66, 1985
TfiI	GAWTC	4 cut(s)	43, 248, 1220, 1436
Tru1I	TTAA	7 cut(s)	234, 413, 617, 1379, 1463, 1845, 2118
Tru9I	TTAA	7 cut(s)	234, 413, 617, 1379, 1463, 1845, 2118
TscAI	CASTG	1 cut(s)	160
TseFI	GTSAC	1 cut(s)	10
TseI	GCWGC	8 cut(s)	356, 421, 602, 607, 1151, 1427, 1964, 2020
Tsp45I	GTSAC	1 cut(s)	10
TspDTI	ATGAA	5 cut(s)	882, 894, 900, 1430, 1539
TspGWI	ACGGA	2 cut(s)	76, 1627
TspRI	CASTG	1 cut(s)	160
Van91I	CCANNNNNTGG	1 cut(s)	1638
Vha464I	CTTAAG	1 cut(s)	1844
VpaK11BI	GGWCC	4 cut(s)	162, 243, 583, 991
XapI	RAATTY	3 cut(s)	1002, 1291, 1828
XbaI	TCTAGA	1 cut(s)	1600
XceI	RCATGY	2 cut(s)	1047, 1676
XcmI	CCANNNNNNNNNTGG	1 cut(s)	814
XhoI	CTCGAG	3 cut(s)	129, 1685, 1778
XspI	CTAG	4 cut(s)	956, 1601, 1695, 1853
ZrmI	AGTACT	1 cut(s)	1683
Zsp2I	ATGCAT	2 cut(s)	1045, 1839

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.