Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0003381

Physical Location & Seq

Genomic Coordinates Reverse (-)

65567337 .. 65572035

Gene Structure 4699 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG427700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2547 bp

ATGGAGCCGTTGACGACAGAGCAGGAGGTGCTATTGGTGAATGATGATGTCAATGCAGAGGGTGCGGATGAGCAAAGCAACACAAAGCAAGATGGTGGTAGTCCGGAAGAAAAGGCAGGTACTAACAAGGATTATTCTTCATCTCGAGAAATTGATGTGTCTCCCGGTTTATATACAGTTGGTAATGATTATAATCTAGGGGAGTTGTCAGTCGAAGAGTTTGAGTCTGCATCCGGTGGTGGTTCTGAGGCCATCAACAGCGCTTCCATTCAAGAAGATTTGCAACGTGAATCAACTTCTGATGACAAGTCAGTCGAGCCTGAAACGTTAACGAGGCAGTTTGATCTGCCTGAATCTGATCATGGCAATGATTCTTTTGTTGCCTCTGGGCTTGAGGATTCTGATAGTAGCCTCGCTGTAGGTACAGGAGATTTGACTTCTGAACTTAAAGAGAACCCGGTTAGTGTCGAACCAATCAAGTTGCCAGTCTCTGACGCTATGAATTCAAACCTTAGCATTGAACCCCAGGATGAAATTCCTGGGGGAACTGAAAATCAAACTGCCACTTCTGAGTCTTCCACTGTTATTGCACATGAACACAATGAATCTGTAGCTGTGGATGTTTCAGTTTCTTCGGAATCAAACATTCTTTTAGAACCTCAAGTATTGTCTAAAGATAACCTAGGAGTTGTAGCCTCGTCTTCAACCAAAGAAAACCTTGACCCAAGTGAAACAGTACAGGTCTTGGCTGAGGGAAATAGTTCCTCCCTGGAAGTGCATACCATAACTGAAAGTGGGTCATCTGCAACGTCTGTGTCAGAACAGGCCTATCAAAATGCAAATGAACAATACACATATTATTCTAATGATACAAATACAAGCAAATCACAATTACCAACTCCTCGGAATTCCTTCTCTTCTGCTGGTATACCTGCTCCAACTGTGGTTTCTGCAGCTGTACAGGTGCTTCCTGGAAAGGTTTTGGTACCTGCAGTTGTTGATCAGGTTCAGGGGCAGGCATTAGCAGCTCTACAAGTGTTGAAGGTCGTAGAGGCTGATGTTCAACCTGGTGATTTGTGTACACGTCGTGAATATGCTCGATGGTTGGTATCTGCAAGTAGCGCTCTCTCGAGGAACTCAGTATCTAAAGTATATCCTGCAATGTATATTGAGAATATTACTGAGCTTGCATTTGATGACGTTACACCTGAAGACCCTGATTTCCCTTCCATCCAAGGTTTGGCTGAATCTGGACTTATCTCAAGTAAGCTCTCAAGACGTGATATGGATTCTTTGTTGGATGAGGACGAGGGTCCATTGTACTTCTCTCCTGAAAGCGCTCTATCACGTCAAGATCTTGTAAGCTGGAAGATGACCCTAGAGAAAAGACATCTTCCAGAAGCTGACAGGAAGGTCCTCCACCAAATCTCAGGATTCATTGATACTGATAAGATACACCCAGATGCATGTCCTGCACTTGTTGCTGACCTATCTGGAGAACAGGGTATTATTGCTCTTGCATTTGGTTACACTAGACTGTTTCAGCCAAATAAGCCAGTAACAAAAGCCCAGGCTGCTATTGCTCTTGCCACTGGTGAGTATGCTGATGTAGTTAGCGAGGAGCTTGCACGCATTGAAGCAGAAGCTATGGCAGAAAAGGCTGTTGATGCACATAATGCTTTAGTAGCCCAAGTTGAAAAGGATGTGAATGCAAGTTTTGAGAAGGATCTTTCCCTTGAGAGGGAAAAAATTGATGCTGTGGAGAGAATGGCTGAAGAAGCAAAGCGGGAATTGGAAAGGTTGAGGGCTGAGAGAGAGGCAGATAATATTGCCCTGATGAAGGAACGTGCAGCTGTTGAATCAGAAATGGAAGTTCTAGCAAGGTTGAGGCATGAGGTGGAGGAGCAATTAGAGAACCTAATGAGTAACAAAGTAGAGATATCATTTGAAAAGGAAAGAGTTAGCAAACTTAGGAAAGATGCAGAAAATGAAAGCCAGGAGATTGCTCGTTTGCAGTATGATCTAGAGGTTGAACGGAAAGCCTTGTCCATGGCCAGGGCTTGGGCTGAAGATGAGGCAAAAAGAGCAAGAGAACAAGCTAAATCCCTGGAGGAGGCTAGAGATCGCTGGGAGAGGCATGGCATCAAAGTAGTTGTTGACAATGACCTCCGTGAAGAGGCATTGGGTGAAGCTACTTGGGTTGATGCTGGCAAGTTGTCAGTTGAAGGAACTGTTAGCAGGGCTGAGAATTTGATGGACAAACTCAAGGCAATGGCAGTGGATATAAAAGGAAGAAGCAGAGATGTAATTGATAAAATCATTCAAAAGATAGCCTTGTTTGTATCAAGTTTGAGGGAATGGGTTTCCAAAGCTGGAGAAAGGGCTGGAGAACTTAAAGACACAGCCATCTCAAAGGTCAACAGATCAGCACAAGAGTTGCAGCAAAGCACCTTGGAGTACAGCTTGGTAGTCAAAGAAGGTGCTAAGCGCGTAGCGGATGATTGTAGGGAAGGAGTGGAGAAACTCACCCAAAGGTTCAAGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SLH

Protein Analysis

848

Amino Acids

92.74

Weight (kDa)

4.53

Isoelectric Point (pI)

46.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003381)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23890 AT5G23890 AT5G52410 AT5G52410 AT5G52410
fragaria_vesca	FvH4_7g29760 FvH4_7g29760 FvH4_7g29760 FvH4_7g29760 FvH4_7g29760 FvH4_7g29760
malus_domestica	MD01G1204600.v1.1 MD07G1273100.v1.1
prunus_persica	Prupe.2G296700_v2.0.a1 Prupe.2G296700_v2.0.a1 Prupe.2G296700_v2.0.a1 Prupe.2G296700_v2.0.a1
pyrus_communis	pycom01g21410 pycom07g24950 pycom07g24960
rosa_chinensis	RchiOBHm_Chr1g0377741
rosa_laevigata	RLG00000026502
rosa_multiflora	Rmu_co7992088.1_g000001 Rmu_co8121168.1_g000001 Rmu_co8359937.1_g000001 Rmu_sc0005758.1_g000001 Rmu_sc0040285.1_g000001
rosa_roxburghii	Rroxscaffold_4G00281100
rosa_rugosa	Rorug01G0404500 Rorug01G0404500 Rorug01G0404500
rosa_samantha	Rh1AG427700 Rh1BG381600 Rh1CG395500 Rh1DG412600
rosa_wichuraiana	Rw1G037080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	192
AasI	GACNNNNNNGTC	2 cut(s)	311, 1412
Acc36I	ACCTGC	3 cut(s)	107, 940, 997
Acc65I	GGTACC	1 cut(s)	985
AccB1I	GGYRCC	1 cut(s)	985
AccB7I	CCANNNNNTGG	2 cut(s)	1240, 2061
AccI	GTMKAC	1 cut(s)	928
AccII	CGCG	1 cut(s)	2490
AccIII	TCCGGA	1 cut(s)	103
AciI	CCGC	3 cut(s)	65, 1786, 2495
AclI	AACGTT	1 cut(s)	326
AclWI	GGATC	1 cut(s)	1734
AcoI	YGGCCR	1 cut(s)	2052
AcsI	RAATTY	4 cut(s)	502, 534, 907, 2248
AcuI	CTGAAG	3 cut(s)	1230, 1794, 2088
AdeI	CACNNNGTG	1 cut(s)	1088
AfaI	GTAC	8 cut(s)	121, 424, 738, 960, 987, 1081, 1322, 2459
AfeI	AGCGCT	3 cut(s)	262, 1123, 1339
AfiI	CCNNNNNNNGG	8 cut(s)	1240, 1740, 1741, 1840, 2055, 2061, 2113, 2176
AflIII	ACRYGT	1 cut(s)	1082
AjiI	CACGTC	3 cut(s)	1085, 1280, 1349
AjnI	CCWGG	9 cut(s)	525, 538, 768, 970, 1066, 1569, 1995, 2054, 2106
AjuI	GAANNNNNNNTTGG	2 cut(s)	931, 963
Alw26I	GTCTC	2 cut(s)	165, 493
AlwI	GGATC	1 cut(s)	1734
AlwNI	CAGNNNCTG	2 cut(s)	491, 1403
Ama87I	CYCGRG	2 cut(s)	144, 1129
Aor13HI	TCCGGA	1 cut(s)	103
Aor51HI	AGCGCT	3 cut(s)	262, 1123, 1339
AoxI	GGCC	3 cut(s)	249, 825, 2052
ApeKI	GCWGC	5 cut(s)	953, 1025, 1574, 1850, 2440
ApoI	RAATTY	4 cut(s)	502, 534, 907, 2248
Asp700I	GAANNNNTTC	2 cut(s)	760, 911
Asp718I	GGTACC	1 cut(s)	985
AspA2I	CCTAGG	1 cut(s)	682
AspLEI	GCGC	4 cut(s)	263, 1124, 1340, 2490
AspS9I	GGNCC	2 cut(s)	1313, 1414
AsuC2I	CCSGG	2 cut(s)	165, 458
AsuHPI	GGTGA	5 cut(s)	49, 1082, 1607, 2198, 2518
AvaI	CYCGRG	2 cut(s)	144, 1129
AvaII	GGWCC	2 cut(s)	1313, 1414
AvrII	CCTAGG	1 cut(s)	682
BalI	TGGCCA	1 cut(s)	2054
BanI	GGYRCC	1 cut(s)	985
BarI	GAAGNNNNNNTAC	2 cut(s)	951, 983
BbsI	GAAGAC	3 cut(s)	567, 693, 1218
BbvCI	CCTCAGC	1 cut(s)	750
BbvI	GCAGC	5 cut(s)	965, 1037, 1561, 1862, 2452
BccI	CCATC	6 cut(s)	86, 260, 1095, 1238, 2248, 2414
BcgI	CGANNNNNNTGC	2 cut(s)	1607, 1641
BciT130I	CCWGG	9 cut(s)	527, 540, 770, 972, 1068, 1571, 1997, 2056, 2108
BclI	TGATCA	2 cut(s)	358, 1000
BcnI	CCSGG	2 cut(s)	165, 458
BcoDI	GTCTC	2 cut(s)	165, 493
BfaI	CTAG	7 cut(s)	197, 683, 1379, 1533, 1877, 2024, 2118
BfmI	CTRYAG	4 cut(s)	417, 609, 951, 990
BfoI	RGCGCY	3 cut(s)	264, 1125, 1341
BfuAI	ACCTGC	3 cut(s)	107, 940, 997
BglII	AGATCT	1 cut(s)	1354
BisI	GCNGC	5 cut(s)	954, 1026, 1575, 1851, 2441
BlnI	CCTAGG	1 cut(s)	682
BlpI	GCTNAGC	1 cut(s)	2484
BlsI	GCNGC	5 cut(s)	955, 1027, 1576, 1852, 2442
Bme18I	GGWCC	2 cut(s)	1313, 1414
BmeT110I	CYCGRG	2 cut(s)	144, 1129
BmgBI	CACGTC	3 cut(s)	1085, 1280, 1349
BmgT120I	GGNCC	2 cut(s)	1313, 1414
BmiI	GGNNCC	3 cut(s)	6, 987, 1314
BmsI	GCATC	7 cut(s)	239, 1453, 1657, 1744, 1969, 2151, 2194
BoxI	GACNNNNGTC	1 cut(s)	1311
BpiI	GAAGAC	3 cut(s)	567, 693, 1218
BpmI	CTGGAG	4 cut(s)	1515, 2129, 2394, 2406
Bpu10I	CCTNAGC	2 cut(s)	512, 750
Bpu1102I	GCTNAGC	1 cut(s)	2484
BpuEI	CTTGAG	6 cut(s)	413, 645, 1246, 1258, 1757, 2249
BpuMI	CCSGG	2 cut(s)	165, 458
BsaBI	GATNNNNATC	1 cut(s)	192
BsaWI	WCCGGW	2 cut(s)	103, 233
Bsc4I	CCNNNNNNNGG	8 cut(s)	1240, 1740, 1741, 1840, 2055, 2061, 2113, 2176
Bse1I	ACTGG	3 cut(s)	485, 1556, 1597
Bse3DI	GCAATG	3 cut(s)	373, 1167, 2277
Bse8I	GATNNNNATC	1 cut(s)	192
BseAI	TCCGGA	1 cut(s)	103
BseBI	CCWGG	9 cut(s)	527, 540, 770, 972, 1068, 1571, 1997, 2056, 2108
BseGI	GGATG	8 cut(s)	73, 230, 535, 625, 1230, 1306, 1708, 2503
BseJI	GATNNNNATC	1 cut(s)	192
BseLI	CCNNNNNNNGG	8 cut(s)	1240, 1740, 1741, 1840, 2055, 2061, 2113, 2176
BseMI	GCAATG	3 cut(s)	373, 1167, 2277
BseMII	CTCAG	8 cut(s)	237, 561, 741, 1152, 1173, 1443, 1800, 2235
BseNI	ACTGG	3 cut(s)	485, 1556, 1597
BseRI	GAGGAG	4 cut(s)	891, 1634, 1916, 2126
BseXI	GCAGC	5 cut(s)	965, 1037, 1561, 1862, 2452
BseYI	CCCAGC	1 cut(s)	2127
BsgI	GTGCAG	2 cut(s)	1458, 1869
Bsh1236I	CGCG	1 cut(s)	2490
BshFI	GGCC	3 cut(s)	251, 827, 2054
BshNI	GGYRCC	1 cut(s)	985
BsiHKCI	CYCGRG	2 cut(s)	144, 1129
BsiSI	CCGG	4 cut(s)	104, 165, 234, 458
BslI	CCNNNNNNNGG	8 cut(s)	1240, 1740, 1741, 1840, 2055, 2061, 2113, 2176
BsmAI	GTCTC	2 cut(s)	165, 493
BsmI	GAATGC	1 cut(s)	1714
BsnI	GGCC	3 cut(s)	251, 827, 2054
BsoBI	CYCGRG	2 cut(s)	144, 1129
Bsp13I	TCCGGA	1 cut(s)	103
Bsp1407I	TGTACA	2 cut(s)	958, 1079
Bsp143I	GATC	8 cut(s)	343, 358, 1000, 1354, 1726, 2020, 2122, 2423
Bsp1720I	GCTNAGC	1 cut(s)	2484
Bsp19I	CCATGG	1 cut(s)	2049
BspACI	CCGC	3 cut(s)	65, 1786, 2495
BspANI	GGCC	3 cut(s)	251, 827, 2054
BspCNI	CTCAG	8 cut(s)	238, 562, 742, 1151, 1174, 1442, 1801, 2236
BspEI	TCCGGA	1 cut(s)	103
BspFNI	CGCG	1 cut(s)	2490
BspLI	GGNNCC	3 cut(s)	6, 987, 1314
BspMAI	CTGCAG	2 cut(s)	955, 994
BspMI	ACCTGC	3 cut(s)	107, 940, 997
BspPI	GGATC	1 cut(s)	1734
BspT107I	GGYRCC	1 cut(s)	985
BsrDI	GCAATG	3 cut(s)	373, 1167, 2277
BsrGI	TGTACA	2 cut(s)	958, 1079
BsrI	ACTGG	3 cut(s)	485, 1556, 1597
BssMI	GATC	8 cut(s)	343, 358, 1000, 1354, 1726, 2020, 2122, 2423
BssNAI	GTATAC	1 cut(s)	929
BssT1I	CCWWGG	4 cut(s)	682, 1234, 2049, 2451
Bst1107I	GTATAC	1 cut(s)	929
Bst2UI	CCWGG	9 cut(s)	527, 540, 770, 972, 1068, 1571, 1997, 2056, 2108
Bst4CI	ACNGT	6 cut(s)	178, 583, 736, 943, 1539, 2233
Bst6I	CTCTTC	3 cut(s)	210, 922, 2169
BstAPI	GCANNNNNTGC	5 cut(s)	28, 62, 1472, 1481, 1676
BstAUI	TGTACA	2 cut(s)	958, 1079
BstC8I	GCNNGC	5 cut(s)	1017, 1188, 1626, 1630, 2209
BstDSI	CCRYGG	1 cut(s)	2049
BstENI	CCTNNNNNAGG	2 cut(s)	1838, 2111
BstF5I	GGATG	8 cut(s)	73, 230, 535, 625, 1230, 1306, 1708, 2503
BstFNI	CGCG	1 cut(s)	2490
BstH2I	RGCGCY	3 cut(s)	264, 1125, 1341
BstHHI	GCGC	4 cut(s)	263, 1124, 1340, 2490
BstKTI	GATC	8 cut(s)	346, 361, 1003, 1357, 1729, 2023, 2125, 2426
BstMAI	GTCTC	2 cut(s)	165, 493
BstMBI	GATC	8 cut(s)	343, 358, 1000, 1354, 1726, 2020, 2122, 2423
BstNI	CCWGG	9 cut(s)	527, 540, 770, 972, 1068, 1571, 1997, 2056, 2108
BstNSI	RCATGY	1 cut(s)	1470
BstPAI	GACNNNNGTC	1 cut(s)	1311
BstSFI	CTRYAG	4 cut(s)	417, 609, 951, 990
BstUI	CGCG	1 cut(s)	2490
BstV1I	GCAGC	5 cut(s)	965, 1037, 1561, 1862, 2452
BstV2I	GAAGAC	3 cut(s)	567, 693, 1218
BstX2I	RGATCY	2 cut(s)	1354, 1726
BstYI	RGATCY	2 cut(s)	1354, 1726
BstZ17I	GTATAC	1 cut(s)	929
BsuRI	GGCC	3 cut(s)	251, 827, 2054
BtgI	CCRYGG	1 cut(s)	2049
BtrI	CACGTC	3 cut(s)	1085, 1280, 1349
BtsCI	GGATG	8 cut(s)	73, 230, 535, 625, 1230, 1306, 1708, 2503
BtsI	GCAGTG	1 cut(s)	2283
BtsIMutI	CAGTG	3 cut(s)	579, 1590, 2283
BveI	ACCTGC	3 cut(s)	107, 940, 997
Cac8I	GCNNGC	5 cut(s)	1017, 1188, 1626, 1630, 2209
CaiI	CAGNNNCTG	2 cut(s)	491, 1403
CfoI	GCGC	4 cut(s)	263, 1124, 1340, 2490
Cfr13I	GGNCC	2 cut(s)	1313, 1414
CseI	GACGC	1 cut(s)	503
CsiI	ACCWGGT	1 cut(s)	1066
Csp6I	GTAC	8 cut(s)	120, 423, 737, 959, 986, 1080, 1321, 2458
CspCI	CAANNNNNGTGG	4 cut(s)	568, 603, 2259, 2294
CviAII	CATG	7 cut(s)	362, 593, 1467, 1892, 2050, 2138, 2544
CviQI	GTAC	8 cut(s)	120, 423, 737, 959, 986, 1080, 1321, 2458
DpnI	GATC	8 cut(s)	345, 360, 1002, 1356, 1728, 2022, 2124, 2425
DpnII	GATC	8 cut(s)	343, 358, 1000, 1354, 1726, 2020, 2122, 2423
DraIII	CACNNNGTG	1 cut(s)	1088
DrdI	GACNNNNNNGTC	2 cut(s)	311, 1412
DseDI	GACNNNNNNGTC	2 cut(s)	311, 1412
EaeI	YGGCCR	1 cut(s)	2052
Eam1104I	CTCTTC	3 cut(s)	210, 922, 2169
EarI	CTCTTC	3 cut(s)	210, 922, 2169
Eco130I	CCWWGG	4 cut(s)	682, 1234, 2049, 2451
Eco147I	AGGCCT	1 cut(s)	827
Eco32I	GATATC	1 cut(s)	1941
Eco47I	GGWCC	2 cut(s)	1313, 1414
Eco47III	AGCGCT	3 cut(s)	262, 1123, 1339
Eco57I	CTGAAG	3 cut(s)	1230, 1794, 2088
Eco88I	CYCGRG	2 cut(s)	144, 1129
EcoNI	CCTNNNNNAGG	2 cut(s)	1838, 2111
EcoO109I	RGGNCCY	1 cut(s)	1414
EcoRI	GAATTC	2 cut(s)	502, 907
EcoRII	CCWGG	9 cut(s)	525, 538, 768, 970, 1066, 1569, 1995, 2054, 2106
EcoRV	GATATC	1 cut(s)	1941
EcoT14I	CCWWGG	4 cut(s)	682, 1234, 2049, 2451
EcoT22I	ATGCAT	1 cut(s)	1468
ErhI	CCWWGG	4 cut(s)	682, 1234, 2049, 2451
FaeI	CATG	7 cut(s)	365, 596, 1470, 1895, 2053, 2141, 2547
FalI	AAGNNNNNCTT	4 cut(s)	702, 734, 2318, 2350
FatI	CATG	7 cut(s)	361, 592, 1466, 1891, 2049, 2137, 2543
FauI	CCCGC	1 cut(s)	1779
FbaI	TGATCA	2 cut(s)	358, 1000
FblI	GTMKAC	1 cut(s)	928
Fnu4HI	GCNGC	5 cut(s)	954, 1026, 1575, 1851, 2441
FokI	GGATG	8 cut(s)	80, 217, 542, 632, 1217, 1313, 1715, 2510
Fsp4HI	GCNGC	5 cut(s)	954, 1026, 1575, 1851, 2441
FspBI	CTAG	7 cut(s)	197, 683, 1379, 1533, 1877, 2024, 2118
GlaI	GCGC	4 cut(s)	262, 1123, 1339, 2489
GluI	GCNGC	5 cut(s)	954, 1026, 1575, 1851, 2441
GsaI	CCCAGC	1 cut(s)	2131
GsuI	CTGGAG	4 cut(s)	1515, 2129, 2394, 2406
HaeII	RGCGCY	3 cut(s)	264, 1125, 1341
HaeIII	GGCC	3 cut(s)	251, 827, 2054
HapII	CCGG	4 cut(s)	104, 165, 234, 458
HgaI	GACGC	1 cut(s)	503
HhaI	GCGC	4 cut(s)	263, 1124, 1340, 2490
Hin1II	CATG	7 cut(s)	365, 596, 1470, 1895, 2053, 2141, 2547
Hin6I	GCGC	4 cut(s)	261, 1122, 1338, 2488
HinP1I	GCGC	4 cut(s)	261, 1122, 1338, 2488
HincII	GTYRAC	4 cut(s)	12, 330, 2158, 2419
HindII	GTYRAC	4 cut(s)	12, 330, 2158, 2419
HpaI	GTTAAC	1 cut(s)	330
HpaII	CCGG	4 cut(s)	104, 165, 234, 458
HphI	GGTGA	5 cut(s)	49, 1082, 1607, 2198, 2518
Hpy166II	GTNNAC	7 cut(s)	12, 330, 929, 1080, 1082, 2158, 2419
Hpy8I	GTNNAC	7 cut(s)	12, 330, 929, 1080, 1082, 2158, 2419
Hpy99I	CGWCG	1 cut(s)	1089
HpyAV	CCTTC	9 cut(s)	922, 1036, 1236, 1405, 1717, 1834, 2219, 2471, 2504
HpyCH4III	ACNGT	6 cut(s)	178, 583, 736, 943, 1539, 2233
HpyCH4IV	ACGT	8 cut(s)	286, 326, 809, 1084, 1200, 1279, 1348, 1846
HpySE526I	ACGT	8 cut(s)	286, 326, 809, 1084, 1200, 1279, 1348, 1846
Hsp92II	CATG	7 cut(s)	365, 596, 1470, 1895, 2053, 2141, 2547
HspAI	GCGC	4 cut(s)	261, 1122, 1338, 2488
Kpn2I	TCCGGA	1 cut(s)	103
KpnI	GGTACC	1 cut(s)	989
Ksp22I	TGATCA	2 cut(s)	358, 1000
KspAI	GTTAAC	1 cut(s)	330
Kzo9I	GATC	8 cut(s)	343, 358, 1000, 1354, 1726, 2020, 2122, 2423
LmnI	GCTCC	4 cut(s)	4, 940, 1621, 1903
Lsp1109I	GCAGC	5 cut(s)	965, 1037, 1561, 1862, 2452
LweI	GCATC	7 cut(s)	239, 1453, 1657, 1744, 1969, 2151, 2194
MabI	ACCWGGT	1 cut(s)	1066
MaeI	CTAG	7 cut(s)	197, 683, 1379, 1533, 1877, 2024, 2118
MaeII	ACGT	8 cut(s)	286, 326, 809, 1084, 1200, 1279, 1348, 1846
MaeIII	GTNAC	4 cut(s)	1201, 1526, 1558, 1925
MalI	GATC	8 cut(s)	345, 360, 1002, 1356, 1728, 2022, 2124, 2425
MboI	GATC	8 cut(s)	343, 358, 1000, 1354, 1726, 2020, 2122, 2423
MflI	RGATCY	2 cut(s)	1354, 1726
MlsI	TGGCCA	1 cut(s)	2054
MluNI	TGGCCA	1 cut(s)	2054
MlyI	GAGTC	2 cut(s)	233, 581
MmeI	TCCRAC	2 cut(s)	962, 1278
Mox20I	TGGCCA	1 cut(s)	2054
Mph1103I	ATGCAT	1 cut(s)	1468
MroI	TCCGGA	1 cut(s)	103
MroXI	GAANNNNTTC	2 cut(s)	760, 911
MscI	TGGCCA	1 cut(s)	2054
MseI	TTAA	3 cut(s)	329, 447, 2394
MslI	CAYNNNNRTG	2 cut(s)	366, 1461
Msp20I	TGGCCA	1 cut(s)	2054
MspA1I	CMGCKG	2 cut(s)	956, 1853
MspI	CCGG	4 cut(s)	104, 165, 234, 458
Mva1269I	GAATGC	1 cut(s)	1714
MvaI	CCWGG	9 cut(s)	527, 540, 770, 972, 1068, 1571, 1997, 2056, 2108
MvnI	CGCG	1 cut(s)	2490
NciI	CCSGG	2 cut(s)	165, 458
NcoI	CCATGG	1 cut(s)	2049
NdeII	GATC	8 cut(s)	343, 358, 1000, 1354, 1726, 2020, 2122, 2423
NlaIII	CATG	7 cut(s)	365, 596, 1470, 1895, 2053, 2141, 2547
NlaIV	GGNNCC	3 cut(s)	6, 987, 1314
NsiI	ATGCAT	1 cut(s)	1468
NspI	RCATGY	1 cut(s)	1470
PaeR7I	CTCGAG	2 cut(s)	144, 1129
PceI	AGGCCT	1 cut(s)	827
PctI	GAATGC	1 cut(s)	1714
PdmI	GAANNNNTTC	2 cut(s)	760, 911
PflMI	CCANNNNNTGG	2 cut(s)	1240, 2061
PfoI	TCCNGGA	1 cut(s)	970
PkrI	GCNGC	5 cut(s)	955, 1027, 1576, 1852, 2442
PleI	GAGTC	2 cut(s)	232, 580
PpsI	GAGTC	2 cut(s)	232, 580
PpuMI	RGGWCCY	1 cut(s)	1414
PshAI	GACNNNNGTC	1 cut(s)	1311
PsiI	TTATAA	1 cut(s)	192
Psp1406I	AACGTT	1 cut(s)	326
Psp5II	RGGWCCY	1 cut(s)	1414
Psp6I	CCWGG	9 cut(s)	525, 538, 768, 970, 1066, 1569, 1995, 2054, 2106
PspFI	CCCAGC	1 cut(s)	2127
PspGI	CCWGG	9 cut(s)	525, 538, 768, 970, 1066, 1569, 1995, 2054, 2106
PspN4I	GGNNCC	3 cut(s)	6, 987, 1314
PspPI	GGNCC	2 cut(s)	1313, 1414
PspPPI	RGGWCCY	1 cut(s)	1414
PstI	CTGCAG	2 cut(s)	955, 994
PstNI	CAGNNNCTG	2 cut(s)	491, 1403
PsuI	RGATCY	2 cut(s)	1354, 1726
PvuII	CAGCTG	2 cut(s)	956, 1853
RsaI	GTAC	8 cut(s)	121, 424, 738, 960, 987, 1081, 1322, 2459
RsaNI	GTAC	8 cut(s)	120, 423, 737, 959, 986, 1080, 1321, 2458
RseI	CAYNNNNRTG	2 cut(s)	366, 1461
SaqAI	TTAA	3 cut(s)	329, 447, 2394
SatI	GCNGC	5 cut(s)	954, 1026, 1575, 1851, 2441
Sau3AI	GATC	8 cut(s)	343, 358, 1000, 1354, 1726, 2020, 2122, 2423
Sau96I	GGNCC	2 cut(s)	1313, 1414
SchI	GAGTC	2 cut(s)	233, 581
SexAI	ACCWGGT	1 cut(s)	1066
SfaNI	GCATC	7 cut(s)	239, 1453, 1657, 1744, 1969, 2151, 2194
SfcI	CTRYAG	4 cut(s)	417, 609, 951, 990
Sfr274I	CTCGAG	2 cut(s)	144, 1129
SinI	GGWCC	2 cut(s)	1313, 1414
SlaI	CTCGAG	2 cut(s)	144, 1129
SmiMI	CAYNNNNRTG	2 cut(s)	366, 1461
SmlI	CTYRAG	8 cut(s)	144, 392, 660, 1129, 1261, 1273, 1736, 2264
SmoI	CTYRAG	8 cut(s)	144, 392, 660, 1129, 1261, 1273, 1736, 2264
SseBI	AGGCCT	1 cut(s)	827
SsiI	CCGC	3 cut(s)	65, 1786, 2495
SspI	AATATT	2 cut(s)	1177, 1828
SspMI	CTAG	7 cut(s)	197, 683, 1379, 1533, 1877, 2024, 2118
StuI	AGGCCT	1 cut(s)	827
StyI	CCWWGG	4 cut(s)	682, 1234, 2049, 2451
TaaI	ACNGT	6 cut(s)	178, 583, 736, 943, 1539, 2233
TaiI	ACGT	8 cut(s)	289, 329, 812, 1087, 1203, 1282, 1351, 1849
TaqI	TCGA	6 cut(s)	145, 213, 315, 468, 1099, 1130
TatI	WGTACW	5 cut(s)	736, 958, 1079, 1320, 2457
Tru1I	TTAA	3 cut(s)	329, 447, 2394
Tru9I	TTAA	3 cut(s)	329, 447, 2394
TscAI	CASTG	3 cut(s)	586, 1597, 2283
TseI	GCWGC	5 cut(s)	953, 1025, 1574, 1850, 2440
TspDTI	ATGAA	9 cut(s)	129, 515, 546, 609, 618, 858, 1426, 1853, 2004
TspGWI	ACGGA	2 cut(s)	2050, 2159
TspRI	CASTG	3 cut(s)	586, 1597, 2283
Van91I	CCANNNNNTGG	2 cut(s)	1240, 2061
VpaK11BI	GGWCC	2 cut(s)	1313, 1414
XagI	CCTNNNNNAGG	2 cut(s)	1838, 2111
XapI	RAATTY	4 cut(s)	502, 534, 907, 2248
XbaI	TCTAGA	1 cut(s)	2023
XceI	RCATGY	1 cut(s)	1470
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1237
XhoI	CTCGAG	2 cut(s)	144, 1129
XmaJI	CCTAGG	1 cut(s)	682
XmiI	GTMKAC	1 cut(s)	928
XmnI	GAANNNNTTC	2 cut(s)	760, 911
XspI	CTAG	7 cut(s)	197, 683, 1379, 1533, 1877, 2024, 2118
Zsp2I	ATGCAT	1 cut(s)	1468

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.