Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0003381

Physical Location & Seq

Genomic Coordinates Forward (+)

19460302 .. 19464375

Gene Structure 4074 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g21410.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2634 bp

ATGGCGACTATGACTGCAACGTGCTCCCCGAGCTCCCTCCAGCTTCGCTTAGCTCTCAATTTAGGCAATTGCAGTAAACCCTCCTCCGTTCTCGTACGGTGGCGACTGGGGAAGCTCGATAATCGGGCTCGAGTGCTCTGCGTTGCTCAAGGCAGTGAGAGGTCCGGGAGTGGATTGGAGCCCCGTCGCAACGGGGGTTCGTGGGTCAGGTCGAACTCGAGCGCTGACGGTTTTAAAGGGTGGTCCGATTCGGATAATGGGGAAGAGTCATTGGACTCGCAGAGGAAGAAATGGTTTGGAGGGACTGTGGGAGCTGGAGTTGCTGGAGTCGTTCTTGTTGCGGGGCTTGCTTTTGCAGCATTGTCTTTGGGAAAACGAAACAAATTGAGCACAAAACAACAGATGGAGCCATTAACGACGCAGCAGGAGCGGTCTTTGACTTATGATGATGACAATGAGAGGAGTACAGAAGATGTGGATGATCAAAGCAATGTGAAGCATGATGCTAATAGTAGTCCGGAAGAAAGGACAGGTACTAATGAGGATTCTTCTTCATCTCCAGAAATTGAACAGTCTCCCAGTGAAATTAGAGTTGGTAATGATTATGATATAGGGGGCTTGTCAGGACAAGATTTTGAAAAAACATCCAGAGGTACTGAGGTGGTTAATAGTGCTTCCGATAAAGGAGATACACCACATGAATCAACTTCTGATGACAAGTCAGTTGAGCCTGATGGCATTGATTCAATTCGTGCCTCTGGGCTTGAGGATTTTGACAGAAGCCTTGCTGTAGGTGTAGGAGATTTAGCTTCTGAACTTAAAGAGAACCTAGAGAGTGTCAAACGAACCAACTTGCAAGCCTCTGAAACTAATCAGTCAAACCTTAGCATTGAACCCCAGGATGGAGTACTGGGGACAAGTGAAAACCAAACTGCCACCTTTGAGTCTTCTACTTTTATTGCCGATGCACAGGAACTTAGTCAACCCATAGCTCTGGATACATCAGTTACGACACAATCAAACACAATTTTAGAACCTCAGGTTTCATCTGAAGATAACATAGGGCCTGTAACCCCATCTTCAACCGAAGAAAACCTTGACCTCAGCAAAACACTGCAGGTTTTAGCTGAGGGAATTAGTTCATCCCTGGAAGAGAATACCATAACTGAAAGTGAGCCGTCTAGAAGCAAATCACAATTACCAACTGCTGGGAATTCCTTCACTTCTGCTGGAATACCTGCTCCAACTGTGGTTTCTGCAGCTCTACAGGTGGTTCCTGGAAAGGTTTTGGTTCCGGCAGTTGTTGATCAGGTCCAGGGGCAGGCATTAGCAGCGCTGCAAGTGTTAAAGGTCATAGAGGCTGATGTTCAACCTGGTGATTTGTGTACACGGCGTGAATATGCCCGTTGGTTGGTTTTTGCAAGTAGTGCTCTTTCAAGGAACTCAATCTCTAAAATATATCCTGCTATGTATATTGAGAATGTTACTGAGCTTGCATTTGATGATATTACACCTGAAGACCCTGATTTCCCATCCATTCAAGGTTTGGCTGAAGCAGGACTTATCTCAAGCAGGCTGTCAAGAAATGATATGCTTTCTTCCTTGGATGAAAATGAAAGTTCATTTTACTTCTCTCCTGAAAGCCCTCTATCACGCCAGGATCTTGTAAGTTGGAAGATGGCCCTAGAGAAAAAACATCTCCCAAAAGCCGACAAGGAGGTCCTCTACCAAATTTCTGGTTTTATAGACACTGATAAGATACATCCAGATGCATGTCCTGCACTTGTTGCTGACCTATCTGGAGAACAGGGTATTATTGCTCTTGCATTTGGTGAACTCTTCCAGCCTGATAAGCCAGTAACAAAAGCCCAGGCTGCTATTGCCCTTGCAACCGGAGAGTATTCAGACTCGGTGAGTGAGGAGCTTGCACGTATTGAAGCAGAAGCTATAGCAGAAAATGCTGTGGAGGCACATAATGCTTTAGTGGCTGAAGTTGAAAAGGATGTGAACGCAAATTTTGAGAAGGATCTTTCCATGGAGAGGGAAAAAATTGATGCTGTGGAGAAAATGGCTGAAGAAGCAAGACGTGAATTGGAAAGGTTAAGATCCGAGAGAGAGGAAGATAATATTGCCTTGATGAAAGAACGTGCAGCTGTTGAATCAGAAATGGAAGTTCTGTCCAAGTTAAGGCATGAGGTGGAGGAACAATTGCAGAGCCTAATGAGTAACAAAGCAGAGATATCCTATGAAAAAGAAAGAATTAGCAAACTTAGGACTGAAGCAGAAACCGAAAGCCAGGAGATTGCACGCCTACAGCATGATCTAGAGGTTGAACGGAAAGCATTGTCCATGGCCAGGGCTTGGGCTGAAGATGAGGCAAAAAGAGCAAGAGAACATGCTAAAGTACTCGAGGAGGCTAGAGATCGCTGGGAGAGGCAGGGCATCAAGGTAGTTGTTGACAATGACCTCCGAGAAGATACCTTGGGTGAGGCTACATGGCTTGAGGCTGGCAAGCAGTTCTCGGTTGAAGGAGCTGTCAACAGGGCGAAGAATTTGATGGATAAGCTTAAGGCACTAGCAACAAATATAAAAGGGAAATCCCGAGATATAATCGATCGATCATCCAAAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SLH

Protein Analysis

878

Amino Acids

95.69

Weight (kDa)

4.64

Isoelectric Point (pI)

57.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003381)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23890 AT5G23890 AT5G52410 AT5G52410 AT5G52410
fragaria_vesca	FvH4_7g29760 FvH4_7g29760 FvH4_7g29760 FvH4_7g29760 FvH4_7g29760 FvH4_7g29760
malus_domestica	MD01G1204600.v1.1 MD07G1273100.v1.1
prunus_persica	Prupe.2G296700_v2.0.a1 Prupe.2G296700_v2.0.a1 Prupe.2G296700_v2.0.a1 Prupe.2G296700_v2.0.a1
pyrus_communis	pycom01g21410 pycom07g24950 pycom07g24960
rosa_chinensis	RchiOBHm_Chr1g0377741
rosa_laevigata	RLG00000026502
rosa_multiflora	Rmu_co7992088.1_g000001 Rmu_co8121168.1_g000001 Rmu_co8359937.1_g000001 Rmu_sc0005758.1_g000001 Rmu_sc0040285.1_g000001
rosa_roxburghii	Rroxscaffold_4G00281100
rosa_rugosa	Rorug01G0404500 Rorug01G0404500 Rorug01G0404500
rosa_samantha	Rh1AG427700 Rh1BG381600 Rh1CG395500 Rh1DG412600
rosa_wichuraiana	Rw1G037080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1718
Acc36I	ACCTGC	2 cut(s)	1108, 1246
AccB7I	CCANNNNNTGG	2 cut(s)	1208, 2361
AccBSI	CCGCTC	1 cut(s)	430
AccIII	TCCGGA	1 cut(s)	517
AciI	CCGC	2 cut(s)	341, 430
AclWI	GGATC	3 cut(s)	1668, 2034, 2100
AcoI	YGGCCR	1 cut(s)	2352
AcsI	RAATTY	4 cut(s)	1213, 1731, 2014, 2551
AcuI	CTGAAG	7 cut(s)	1071, 1536, 1572, 2010, 2094, 2298, 2388
AdeI	CACNNNGTG	1 cut(s)	1394
AfaI	GTAC	7 cut(s)	96, 466, 535, 655, 909, 1387, 2406
AfeI	AGCGCT	2 cut(s)	223, 1335
AfiI	CCNNNNNNNGG	8 cut(s)	902, 1208, 1321, 1411, 2040, 2187, 2355, 2361
AflII	CTTAAG	1 cut(s)	2567
AjiI	CACGTC	1 cut(s)	2087
AjnI	CCWGG	9 cut(s)	897, 1146, 1276, 1314, 1372, 1656, 1869, 2295, 2354
AjuI	GAANNNNNNNTTGG	4 cut(s)	576, 608, 1237, 1269
Alw21I	GWGCWC	5 cut(s)	26, 35, 138, 392, 1432
Alw26I	GTCTC	1 cut(s)	579
AlwI	GGATC	3 cut(s)	1668, 2034, 2100
Ama87I	CYCGRG	5 cut(s)	28, 129, 217, 2408, 2601
Aor13HI	TCCGGA	1 cut(s)	517
Aor51HI	AGCGCT	2 cut(s)	223, 1335
AoxI	GGCC	3 cut(s)	1064, 1680, 2352
ApeKI	GCWGC	7 cut(s)	356, 421, 1259, 1331, 1336, 1874, 2150
ApoI	RAATTY	4 cut(s)	1213, 1731, 2014, 2551
Asp700I	GAANNNNTTC	2 cut(s)	1138, 1217
AspLEI	GCGC	2 cut(s)	224, 1336
AspS9I	GGNCC	6 cut(s)	162, 243, 1064, 1312, 1681, 1720
AsuC2I	CCSGG	1 cut(s)	166
AsuHPI	GGTGA	4 cut(s)	1388, 1844, 1924, 2498
AvaI	CYCGRG	5 cut(s)	28, 129, 217, 2408, 2601
AvaII	GGWCC	4 cut(s)	162, 243, 1312, 1720
AxyI	CCTNAGG	1 cut(s)	1038
BaeI	ACNNNNGTAYC	4 cut(s)	645, 678, 990, 1023
BalI	TGGCCA	1 cut(s)	2354
BanII	GRGCYC	3 cut(s)	35, 130, 183
BbsI	GAAGAC	2 cut(s)	939, 1524
Bbv12I	GWGCWC	5 cut(s)	26, 35, 138, 392, 1432
BbvCI	CCTCAGC	2 cut(s)	1103, 1128
BbvI	GCAGC	7 cut(s)	368, 433, 1271, 1323, 1343, 1861, 2162
BccI	CCATC	7 cut(s)	397, 728, 896, 1084, 1540, 1672, 2551
BceAI	ACGGC	2 cut(s)	1162, 1406
BcgI	CGANNNNNNTGC	2 cut(s)	120, 154
BciT130I	CCWGG	9 cut(s)	899, 1148, 1278, 1316, 1374, 1658, 1871, 2297, 2356
BciVI	GTATCC	1 cut(s)	991
BclI	TGATCA	2 cut(s)	481, 1306
BcnI	CCSGG	1 cut(s)	166
BcoDI	GTCTC	1 cut(s)	579
BfaI	CTAG	6 cut(s)	830, 1182, 1685, 2324, 2418, 2576
BfmI	CTRYAG	6 cut(s)	789, 1115, 1257, 1265, 1947, 2312
BfoI	RGCGCY	2 cut(s)	225, 1337
BfrI	CTTAAG	1 cut(s)	2567
BfuAI	ACCTGC	2 cut(s)	1108, 1246
BfuI	GTATCC	1 cut(s)	991
BisI	GCNGC	7 cut(s)	357, 422, 1260, 1332, 1337, 1875, 2151
BlpI	GCTNAGC	1 cut(s)	49
BlsI	GCNGC	7 cut(s)	358, 423, 1261, 1333, 1338, 1876, 2152
BmcAI	AGTACT	2 cut(s)	909, 2406
Bme18I	GGWCC	4 cut(s)	162, 243, 1312, 1720
BmeT110I	CYCGRG	5 cut(s)	28, 129, 217, 2408, 2601
BmgBI	CACGTC	1 cut(s)	2087
BmgT120I	GGNCC	6 cut(s)	162, 243, 1064, 1312, 1681, 1720
BmiI	GGNNCC	4 cut(s)	180, 408, 1275, 1293
BmrI	ACTGGG	3 cut(s)	116, 573, 920
BmsI	GCATC	5 cut(s)	493, 955, 1759, 2044, 2451
BmuI	ACTGGG	3 cut(s)	116, 573, 920
BpiI	GAAGAC	2 cut(s)	939, 1524
BpmI	CTGGAG	5 cut(s)	23, 336, 345, 543, 1821
Bpu10I	CCTNAGC	3 cut(s)	884, 1103, 1128
Bpu1102I	GCTNAGC	1 cut(s)	49
BpuEI	CTTGAG	4 cut(s)	132, 785, 1552, 2522
BpuMI	CCSGG	1 cut(s)	166
Bsa29I	ATCGAT	2 cut(s)	2613, 2617
BsaAI	YACGTR	1 cut(s)	1931
BsaJI	CCNNGG	9 cut(s)	897, 1146, 1315, 1602, 1869, 2034, 2349, 2355, 2481
BsaWI	WCCGGW	2 cut(s)	517, 1892
BsaXI	ACNNNNNCTCC	4 cut(s)	291, 303, 321, 333
Bsc4I	CCNNNNNNNGG	8 cut(s)	902, 1208, 1321, 1411, 2040, 2187, 2355, 2361
Bse1I	ACTGG	4 cut(s)	111, 579, 915, 1856
Bse21I	CCTNAGG	1 cut(s)	1038
Bse3DI	GCAATG	1 cut(s)	496
BseAI	TCCGGA	1 cut(s)	517
BseBI	CCWGG	9 cut(s)	899, 1148, 1278, 1316, 1374, 1658, 1871, 2297, 2356
BseCI	ATCGAT	2 cut(s)	2613, 2617
BseDI	CCNNGG	9 cut(s)	897, 1146, 1315, 1602, 1869, 2034, 2349, 2355, 2481
BseGI	GGATG	9 cut(s)	484, 644, 907, 1142, 1532, 1612, 1762, 2008, 2621
BseLI	CCNNNNNNNGG	8 cut(s)	902, 1208, 1321, 1411, 2040, 2187, 2355, 2361
BseMI	GCAATG	1 cut(s)	496
BseMII	CTCAG	5 cut(s)	648, 1052, 1117, 1119, 1479
BseNI	ACTGG	4 cut(s)	111, 579, 915, 1856
BseRI	GAGGAG	4 cut(s)	73, 475, 1934, 2426
BseXI	GCAGC	7 cut(s)	368, 433, 1271, 1323, 1343, 1861, 2162
BseYI	CCCAGC	2 cut(s)	1208, 2427
BsgI	GTGCAG	2 cut(s)	1764, 2169
Bsh1285I	CGRYCG	1 cut(s)	2617
BshFI	GGCC	3 cut(s)	1066, 1682, 2354
BshVI	ATCGAT	2 cut(s)	2613, 2617
BsiEI	CGRYCG	1 cut(s)	2617
BsiHKAI	GWGCWC	5 cut(s)	26, 35, 138, 392, 1432
BsiHKCI	CYCGRG	5 cut(s)	28, 129, 217, 2408, 2601
BsiSI	CCGG	4 cut(s)	165, 518, 1295, 1893
BsiWI	CGTACG	1 cut(s)	94
BslFI	GGGAC	2 cut(s)	316, 928
BslI	CCNNNNNNNGG	8 cut(s)	902, 1208, 1321, 1411, 2040, 2187, 2355, 2361
BsmAI	GTCTC	1 cut(s)	579
BsmFI	GGGAC	2 cut(s)	316, 928
BsnI	GGCC	3 cut(s)	1066, 1682, 2354
BsoBI	CYCGRG	5 cut(s)	28, 129, 217, 2408, 2601
Bsp1286I	GDGCHC	7 cut(s)	26, 35, 130, 138, 183, 392, 1432
Bsp13I	TCCGGA	1 cut(s)	517
Bsp1407I	TGTACA	1 cut(s)	1385
Bsp143I	GATC	9 cut(s)	481, 1306, 1660, 2026, 2105, 2320, 2422, 2614, 2618
Bsp1720I	GCTNAGC	1 cut(s)	49
Bsp19I	CCATGG	2 cut(s)	2034, 2349
BspACI	CCGC	2 cut(s)	341, 430
BspANI	GGCC	3 cut(s)	1066, 1682, 2354
BspCNI	CTCAG	5 cut(s)	649, 1051, 1116, 1120, 1480
BspDI	ATCGAT	2 cut(s)	2613, 2617
BspEI	TCCGGA	1 cut(s)	517
BspLI	GGNNCC	4 cut(s)	180, 408, 1275, 1293
BspMAI	CTGCAG	2 cut(s)	1119, 1261
BspMI	ACCTGC	2 cut(s)	1108, 1246
BspPI	GGATC	3 cut(s)	1668, 2034, 2100
BspTI	CTTAAG	1 cut(s)	2567
BsrBI	CCGCTC	1 cut(s)	430
BsrDI	GCAATG	1 cut(s)	496
BsrGI	TGTACA	1 cut(s)	1385
BsrI	ACTGG	4 cut(s)	111, 579, 915, 1856
BssECI	CCNNGG	9 cut(s)	897, 1146, 1315, 1602, 1869, 2034, 2349, 2355, 2481
BssMI	GATC	9 cut(s)	481, 1306, 1660, 2026, 2105, 2320, 2422, 2614, 2618
BssT1I	CCWWGG	4 cut(s)	1602, 2034, 2349, 2481
Bst2UI	CCWGG	9 cut(s)	899, 1148, 1278, 1316, 1374, 1658, 1871, 2297, 2356
Bst4CI	ACNGT	5 cut(s)	99, 230, 307, 573, 1249
Bst6I	CTCTTC	3 cut(s)	258, 1146, 1844
BstAFI	CTTAAG	1 cut(s)	2567
BstAPI	GCANNNNNTGC	5 cut(s)	1427, 1778, 1787, 1958, 1976
BstAUI	TGTACA	1 cut(s)	1385
BstBAI	YACGTR	1 cut(s)	1931
BstC8I	GCNNGC	9 cut(s)	348, 858, 1323, 1494, 1574, 1926, 2308, 2509, 2513
BstDEI	CTNAG	9 cut(s)	49, 657, 884, 977, 1038, 1103, 1128, 1488, 2270
BstDSI	CCRYGG	2 cut(s)	2034, 2349
BstF5I	GGATG	9 cut(s)	484, 644, 907, 1142, 1532, 1612, 1762, 2008, 2621
BstH2I	RGCGCY	2 cut(s)	225, 1337
BstHHI	GCGC	2 cut(s)	224, 1336
BstKTI	GATC	9 cut(s)	484, 1309, 1663, 2029, 2108, 2323, 2425, 2617, 2621
BstMAI	GTCTC	1 cut(s)	579
BstMBI	GATC	9 cut(s)	481, 1306, 1660, 2026, 2105, 2320, 2422, 2614, 2618
BstMCI	CGRYCG	1 cut(s)	2617
BstNI	CCWGG	9 cut(s)	899, 1148, 1278, 1316, 1374, 1658, 1871, 2297, 2356
BstNSI	RCATGY	2 cut(s)	1776, 2399
BstSFI	CTRYAG	6 cut(s)	789, 1115, 1257, 1265, 1947, 2312
BstV1I	GCAGC	7 cut(s)	368, 433, 1271, 1323, 1343, 1861, 2162
BstV2I	GAAGAC	2 cut(s)	939, 1524
BstX2I	RGATCY	3 cut(s)	1660, 2026, 2105
BstXI	CCANNNNNNTGG	2 cut(s)	994, 1736
BstYI	RGATCY	3 cut(s)	1660, 2026, 2105
Bsu15I	ATCGAT	2 cut(s)	2613, 2617
Bsu36I	CCTNAGG	1 cut(s)	1038
BsuI	GTATCC	1 cut(s)	991
BsuRI	GGCC	3 cut(s)	1066, 1682, 2354
BsuTUI	ATCGAT	2 cut(s)	2613, 2617
BtgI	CCRYGG	2 cut(s)	2034, 2349
BtrI	CACGTC	1 cut(s)	2087
BtsCI	GGATG	9 cut(s)	484, 644, 907, 1142, 1532, 1612, 1762, 2008, 2621
BtsI	GCAGTG	2 cut(s)	160, 1112
BtsIMutI	CAGTG	4 cut(s)	160, 586, 1112, 1749
BveI	ACCTGC	2 cut(s)	1108, 1246
Cac8I	GCNNGC	9 cut(s)	348, 858, 1323, 1494, 1574, 1926, 2308, 2509, 2513
CfoI	GCGC	2 cut(s)	224, 1336
Cfr13I	GGNCC	6 cut(s)	162, 243, 1064, 1312, 1681, 1720
ClaI	ATCGAT	2 cut(s)	2613, 2617
CseI	GACGC	1 cut(s)	427
CsiI	ACCWGGT	1 cut(s)	1372
Csp6I	GTAC	7 cut(s)	95, 465, 534, 654, 908, 1386, 2405
CviAII	CATG	9 cut(s)	500, 698, 1773, 2035, 2192, 2318, 2350, 2396, 2496
CviQI	GTAC	7 cut(s)	95, 465, 534, 654, 908, 1386, 2405
DdeI	CTNAG	9 cut(s)	49, 657, 884, 977, 1038, 1103, 1128, 1488, 2270
DpnI	GATC	9 cut(s)	483, 1308, 1662, 2028, 2107, 2322, 2424, 2616, 2620
DpnII	GATC	9 cut(s)	481, 1306, 1660, 2026, 2105, 2320, 2422, 2614, 2618
DraI	TTTAAA	1 cut(s)	235
DraIII	CACNNNGTG	1 cut(s)	1394
DrdI	GACNNNNNNGTC	1 cut(s)	1718
DseDI	GACNNNNNNGTC	1 cut(s)	1718
EaeI	YGGCCR	1 cut(s)	2352
Eam1104I	CTCTTC	3 cut(s)	258, 1146, 1844
EarI	CTCTTC	3 cut(s)	258, 1146, 1844
Ecl136II	GAGCTC	1 cut(s)	33
Eco130I	CCWWGG	4 cut(s)	1602, 2034, 2349, 2481
Eco24I	GRGCYC	3 cut(s)	35, 130, 183
Eco32I	GATATC	1 cut(s)	2241
Eco47I	GGWCC	4 cut(s)	162, 243, 1312, 1720
Eco47III	AGCGCT	2 cut(s)	223, 1335
Eco53kI	GAGCTC	1 cut(s)	33
Eco57I	CTGAAG	7 cut(s)	1071, 1536, 1572, 2010, 2094, 2298, 2388
Eco81I	CCTNAGG	1 cut(s)	1038
Eco88I	CYCGRG	5 cut(s)	28, 129, 217, 2408, 2601
EcoICRI	GAGCTC	1 cut(s)	33
EcoO109I	RGGNCCY	2 cut(s)	1064, 1720
EcoRI	GAATTC	1 cut(s)	1213
EcoRII	CCWGG	9 cut(s)	897, 1146, 1276, 1314, 1372, 1656, 1869, 2295, 2354
EcoRV	GATATC	1 cut(s)	2241
EcoT14I	CCWWGG	4 cut(s)	1602, 2034, 2349, 2481
EcoT22I	ATGCAT	1 cut(s)	1774
EcoT38I	GRGCYC	3 cut(s)	35, 130, 183
ErhI	CCWWGG	4 cut(s)	1602, 2034, 2349, 2481
FaeI	CATG	9 cut(s)	503, 701, 1776, 2038, 2195, 2321, 2353, 2399, 2499
FalI	AAGNNNNNCTT	4 cut(s)	1080, 1112, 1545, 1577
FaqI	GGGAC	2 cut(s)	316, 928
FatI	CATG	9 cut(s)	499, 697, 1772, 2034, 2191, 2317, 2349, 2395, 2495
FauI	CCCGC	1 cut(s)	334
FbaI	TGATCA	2 cut(s)	481, 1306
Fnu4HI	GCNGC	7 cut(s)	357, 422, 1260, 1332, 1337, 1875, 2151
FokI	GGATG	9 cut(s)	491, 631, 914, 1129, 1519, 1619, 1749, 2015, 2608
FriOI	GRGCYC	3 cut(s)	35, 130, 183
Fsp4HI	GCNGC	7 cut(s)	357, 422, 1260, 1332, 1337, 1875, 2151
FspBI	CTAG	6 cut(s)	830, 1182, 1685, 2324, 2418, 2576
GlaI	GCGC	2 cut(s)	223, 1335
GluI	GCNGC	7 cut(s)	357, 422, 1260, 1332, 1337, 1875, 2151
GsaI	CCCAGC	2 cut(s)	1212, 2431
GsuI	CTGGAG	5 cut(s)	23, 336, 345, 543, 1821
HaeII	RGCGCY	2 cut(s)	225, 1337
HaeIII	GGCC	3 cut(s)	1066, 1682, 2354
HapII	CCGG	4 cut(s)	165, 518, 1295, 1893
HgaI	GACGC	1 cut(s)	427
HhaI	GCGC	2 cut(s)	224, 1336
Hin1II	CATG	9 cut(s)	503, 701, 1776, 2038, 2195, 2321, 2353, 2399, 2499
Hin6I	GCGC	2 cut(s)	222, 1334
HinP1I	GCGC	2 cut(s)	222, 1334
HincII	GTYRAC	3 cut(s)	983, 2458, 2539
HindII	GTYRAC	3 cut(s)	983, 2458, 2539
HindIII	AAGCTT	1 cut(s)	2564
HpaII	CCGG	4 cut(s)	165, 518, 1295, 1893
HphI	GGTGA	4 cut(s)	1388, 1844, 1924, 2498
Hpy166II	GTNNAC	8 cut(s)	77, 983, 1386, 1388, 1835, 2008, 2458, 2539
Hpy8I	GTNNAC	8 cut(s)	77, 983, 1386, 1388, 1835, 2008, 2458, 2539
Hpy99I	CGWCG	2 cut(s)	189, 421
HpyAV	CCTTC	3 cut(s)	1228, 2017, 2522
HpyCH4III	ACNGT	5 cut(s)	99, 230, 307, 573, 1249
HpyCH4IV	ACGT	4 cut(s)	20, 1930, 2086, 2146
HpyF3I	CTNAG	9 cut(s)	49, 657, 884, 977, 1038, 1103, 1128, 1488, 2270
HpySE526I	ACGT	4 cut(s)	20, 1930, 2086, 2146
Hsp92II	CATG	9 cut(s)	503, 701, 1776, 2038, 2195, 2321, 2353, 2399, 2499
HspAI	GCGC	2 cut(s)	222, 1334
Kpn2I	TCCGGA	1 cut(s)	517
Ksp22I	TGATCA	2 cut(s)	481, 1306
Kzo9I	GATC	9 cut(s)	481, 1306, 1660, 2026, 2105, 2320, 2422, 2614, 2618
LmnI	GCTCC	9 cut(s)	29, 38, 178, 311, 406, 427, 1246, 1921, 2531
Lsp1109I	GCAGC	7 cut(s)	368, 433, 1271, 1323, 1343, 1861, 2162
LweI	GCATC	5 cut(s)	493, 955, 1759, 2044, 2451
MabI	ACCWGGT	1 cut(s)	1372
MaeI	CTAG	6 cut(s)	830, 1182, 1685, 2324, 2418, 2576
MaeII	ACGT	4 cut(s)	20, 1930, 2086, 2146
MaeIII	GTNAC	5 cut(s)	1006, 1069, 1483, 1858, 2225
MalI	GATC	9 cut(s)	483, 1308, 1662, 2028, 2107, 2322, 2424, 2616, 2620
MbiI	CCGCTC	1 cut(s)	430
MboI	GATC	9 cut(s)	481, 1306, 1660, 2026, 2105, 2320, 2422, 2614, 2618
MfeI	CAATTG	2 cut(s)	67, 2207
MflI	RGATCY	3 cut(s)	1660, 2026, 2105
MhlI	GDGCHC	7 cut(s)	26, 35, 130, 138, 183, 392, 1432
MlsI	TGGCCA	1 cut(s)	2354
MluNI	TGGCCA	1 cut(s)	2354
MlyI	GAGTC	5 cut(s)	269, 275, 336, 953, 1901
MmeI	TCCRAC	2 cut(s)	1268, 1652
Mox20I	TGGCCA	1 cut(s)	2354
Mph1103I	ATGCAT	1 cut(s)	1774
MroI	TCCGGA	1 cut(s)	517
MroXI	GAANNNNTTC	2 cut(s)	1138, 1217
MscI	TGGCCA	1 cut(s)	2354
MseI	TTAA	8 cut(s)	234, 413, 666, 819, 1346, 2102, 2186, 2568
MslI	CAYNNNNRTG	1 cut(s)	1767
Msp20I	TGGCCA	1 cut(s)	2354
MspA1I	CMGCKG	1 cut(s)	2153
MspCI	CTTAAG	1 cut(s)	2567
MspI	CCGG	4 cut(s)	165, 518, 1295, 1893
MunI	CAATTG	2 cut(s)	67, 2207
MvaI	CCWGG	9 cut(s)	899, 1148, 1278, 1316, 1374, 1658, 1871, 2297, 2356
NciI	CCSGG	1 cut(s)	166
NcoI	CCATGG	2 cut(s)	2034, 2349
NdeII	GATC	9 cut(s)	481, 1306, 1660, 2026, 2105, 2320, 2422, 2614, 2618
NlaIII	CATG	9 cut(s)	503, 701, 1776, 2038, 2195, 2321, 2353, 2399, 2499
NlaIV	GGNNCC	4 cut(s)	180, 408, 1275, 1293
NsiI	ATGCAT	1 cut(s)	1774
NspI	RCATGY	2 cut(s)	1776, 2399
PaeR7I	CTCGAG	3 cut(s)	129, 217, 2408
PcsI	WCGNNNNNNNCGW	1 cut(s)	26
PdmI	GAANNNNTTC	2 cut(s)	1138, 1217
PfeI	GAWTC	5 cut(s)	248, 545, 701, 743, 2159
Pfl23II	CGTACG	1 cut(s)	94
PflMI	CCANNNNNTGG	2 cut(s)	1208, 2361
PfoI	TCCNGGA	2 cut(s)	164, 1276
PkrI	GCNGC	7 cut(s)	358, 423, 1261, 1333, 1338, 1876, 2152
Ple19I	CGATCG	1 cut(s)	2617
PleI	GAGTC	5 cut(s)	269, 274, 335, 952, 1901
PpsI	GAGTC	5 cut(s)	269, 274, 335, 952, 1901
Ppu21I	YACGTR	1 cut(s)	1931
PpuMI	RGGWCCY	1 cut(s)	1720
Psp124BI	GAGCTC	1 cut(s)	35
Psp5II	RGGWCCY	1 cut(s)	1720
Psp6I	CCWGG	9 cut(s)	897, 1146, 1276, 1314, 1372, 1656, 1869, 2295, 2354
PspFI	CCCAGC	2 cut(s)	1208, 2427
PspGI	CCWGG	9 cut(s)	897, 1146, 1276, 1314, 1372, 1656, 1869, 2295, 2354
PspLI	CGTACG	1 cut(s)	94
PspN4I	GGNNCC	4 cut(s)	180, 408, 1275, 1293
PspPI	GGNCC	6 cut(s)	162, 243, 1064, 1312, 1681, 1720
PspPPI	RGGWCCY	1 cut(s)	1720
PspXI	VCTCGAGB	3 cut(s)	129, 217, 2408
PstI	CTGCAG	2 cut(s)	1119, 1261
PsuI	RGATCY	3 cut(s)	1660, 2026, 2105
PvuI	CGATCG	1 cut(s)	2617
PvuII	CAGCTG	1 cut(s)	2153
RsaI	GTAC	7 cut(s)	96, 466, 535, 655, 909, 1387, 2406
RsaNI	GTAC	7 cut(s)	95, 465, 534, 654, 908, 1386, 2405
RseI	CAYNNNNRTG	1 cut(s)	1767
SacI	GAGCTC	1 cut(s)	35
SaqAI	TTAA	8 cut(s)	234, 413, 666, 819, 1346, 2102, 2186, 2568
SatI	GCNGC	7 cut(s)	357, 422, 1260, 1332, 1337, 1875, 2151
Sau3AI	GATC	9 cut(s)	481, 1306, 1660, 2026, 2105, 2320, 2422, 2614, 2618
Sau96I	GGNCC	6 cut(s)	162, 243, 1064, 1312, 1681, 1720
ScaI	AGTACT	2 cut(s)	909, 2406
SchI	GAGTC	5 cut(s)	269, 275, 336, 953, 1901
SduI	GDGCHC	7 cut(s)	26, 35, 130, 138, 183, 392, 1432
SexAI	ACCWGGT	1 cut(s)	1372
SfaNI	GCATC	5 cut(s)	493, 955, 1759, 2044, 2451
SfcI	CTRYAG	6 cut(s)	789, 1115, 1257, 1265, 1947, 2312
Sfr274I	CTCGAG	3 cut(s)	129, 217, 2408
SinI	GGWCC	4 cut(s)	162, 243, 1312, 1720
SlaI	CTCGAG	3 cut(s)	129, 217, 2408
SmiMI	CAYNNNNRTG	1 cut(s)	1767
SmlI	CTYRAG	8 cut(s)	129, 147, 217, 764, 1567, 2408, 2501, 2567
SmoI	CTYRAG	8 cut(s)	129, 147, 217, 764, 1567, 2408, 2501, 2567
SsiI	CCGC	2 cut(s)	341, 430
SspI	AATATT	1 cut(s)	2128
SspMI	CTAG	6 cut(s)	830, 1182, 1685, 2324, 2418, 2576
SstI	GAGCTC	1 cut(s)	35
StyI	CCWWGG	4 cut(s)	1602, 2034, 2349, 2481
TaaI	ACNGT	5 cut(s)	99, 230, 307, 573, 1249
TaiI	ACGT	4 cut(s)	23, 1933, 2089, 2149
TaqI	TCGA	7 cut(s)	117, 130, 212, 218, 2409, 2613, 2617
TatI	WGTACW	4 cut(s)	464, 907, 1385, 2404
TfiI	GAWTC	5 cut(s)	248, 545, 701, 743, 2159
Tru1I	TTAA	8 cut(s)	234, 413, 666, 819, 1346, 2102, 2186, 2568
Tru9I	TTAA	8 cut(s)	234, 413, 666, 819, 1346, 2102, 2186, 2568
TscAI	CASTG	4 cut(s)	160, 586, 1119, 1756
TseI	GCWGC	7 cut(s)	356, 421, 1259, 1331, 1336, 1874, 2150
TspDTI	ATGAA	9 cut(s)	543, 714, 1035, 1131, 1611, 1623, 1629, 2153, 2262
TspGWI	ACGGA	2 cut(s)	76, 2350
TspRI	CASTG	4 cut(s)	160, 586, 1119, 1756
Van91I	CCANNNNNTGG	2 cut(s)	1208, 2361
Vha464I	CTTAAG	1 cut(s)	2567
VpaK11BI	GGWCC	4 cut(s)	162, 243, 1312, 1720
XapI	RAATTY	4 cut(s)	1213, 1731, 2014, 2551
XbaI	TCTAGA	2 cut(s)	1181, 2323
XceI	RCATGY	2 cut(s)	1776, 2399
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1543
XhoI	CTCGAG	3 cut(s)	129, 217, 2408
XmnI	GAANNNNTTC	2 cut(s)	1138, 1217
XspI	CTAG	6 cut(s)	830, 1182, 1685, 2324, 2418, 2576
ZrmI	AGTACT	2 cut(s)	909, 2406
Zsp2I	ATGCAT	1 cut(s)	1774

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.