Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000853

Physical Location & Seq

Genomic Coordinates Reverse (-)

51158996 .. 51164171

Gene Structure 5176 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0404500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGAGCAGGTCTCGCGTGGATGCGATTCTGTCCATGTTCGTTACGGTGCACCCTCACGAGACCTCAGCTCTGCTCCACTCCTCGGCTTCCTTCTTCTTCATTTTGTGCGCTTACTTCGTGGTGCTTCCGCTTCGAGATGAAGGTGCAATCTCTTTAGGCCTATCGAACCTTCCGAGCCTATTTATAGGTTCTCTGCTTCTGACTTCCATTGCTGCACCACTCGCAACTCTCTTTTTCTCTTTGCCGAATGTTCCGAAAGGAAAGGCTTTGGTTTTAATGCACAGGTTTTTTAGTGTGTCACTTGTTGTGTTCTTTATTCTCTGGCATACTTCATCGGCTGGATATCCGCAGTCACAGTTGAAGGGTACTGCCACATCCACGTCAGTAAATGAACGGAAGGGTGATGTTAATCAAGCTAGTACTGCATATCCCATAGGTTGGGAGCACCTTGATTGGTTCTATGTTTCTGTTCGAATTGGATTGTTTCTTTGGATTTCTCTACTTAATCTAATTACAATTTCTTCAACTTGGGCTAGAGTAATCGATGTTATGGACAGTGAGTCAGGTTCCAGATTATTTGGTTTTATTGGTGCTGGAGCCACACTTGGACAGCTTTGTGGGTCATTGTTTGCCACCGGAATGGCTTTCTTGGGGCCATTTTTACTACTGTTTTCTGCTTTGCTGATGGAGTTTGCAGCACAGTCATCAAAAGGGATAACCCAGGATGTGCCCCATCTCCATGAGGAACTAACACCCATCAGAAAAGCTGAGCCTGATCAGCAGAACGAGCCTGATGGGCAAACCGTTCAAAATATCAAAGGAGTTTCTCCCAAGTCTTCTACTCCGGTGATGAAGCCTCAGCTTTGGGCCATCTTAGATGGATTTCGGCTTATATTGTCATCATCTTACTTATTGTATGTGTCTTTGTTCCTGTGGCTGAGTGCGGTTGTCTCTTCATTCTTTTATTTTCAGAAAGTAAGTGTCATTGCCATGACTGTTACTAGTTCTCTTGGAAGAAGAAAATTGCTTGCCCAGATAAACAGCTTTATTGCTATTTTTATCCTCGCCGGACAACTTACCATAACGGGGCATTTTCTCACTGTTGTGGGAGTTACTACAGCTATTTGTTCTGCTCCAGTTGTTGCCTTCTCGAATTTGGTTGCAACTGCTATTTGGCCAACTTGGGTAGCCATTGCTATTTCTGAGACCCTGCGGAAGTTTGTTACATATGTTGTAGCCAGGCCTGGCAGAGAACTCCTATTTACTGTTGTCTCACAGGATGAAAAGTACAAAGCAAAGGTTTGCATTGATGTGTTTGTTCAAAGACTGGGAGATGCTACAGCAGCAGGAATGTACAAGCTACTTTTCAGCACTCTTAATGGGAGAGCATCAACTGTGTCTCTCTACGGCCTGCCTGTCTGTTTGCTGTGGATAGTGATCGCATTTCATTTAGGGCGCCGTCAAGCAGAACTTGCAAGGCTCCGGACACACTCCACTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

500

Amino Acids

54.73

Weight (kDa)

9.4

Isoelectric Point (pI)

36.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000853)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64900 AT1G64930 AT1G64940 AT1G64950 AT2G12190 AT5G61320
fragaria_vesca	FvH4_3g26910 FvH4_4g17150 FvH4_5g25581 FvH4_5g25581 FvH4_5g25581 FvH4_7g21810 FvH4_7g29661 FvH4_7g29661 FvH4_7g29700 FvH4_7g29720 FvH4_7g29721 FvH4_7g29740
malus_domestica	MD01G1203700.v1.1 MD01G1203800.v1.1 MD01G1203900.v1.1 MD01G1204000.v1.1 MD01G1204300.v1.1 MD01G1204400.v1.1 MD01G1204500.v1.1 MD07G1273000.v1.1
prunus_persica	Prupe.2G296300_v2.0.a1 Prupe.2G296500_v2.0.a1 Prupe.2G296600_v2.0.a1
pyrus_communis	pycom01g21300 pycom01g21310 pycom01g21350 pycom01g21400 pycom07g24940
rosa_chinensis	RchiOBHm_Chr1g0377691 RchiOBHm_Chr1g0377701 RchiOBHm_Chr7g0221601
rosa_laevigata	RLG00000002153 RLG00000026503 RLG00000026505
rosa_multiflora	Rmu_sc0002832.1_g000018 Rmu_sc0002832.1_g000019 Rmu_sc0005704.1_g000011 Rmu_sc0038902.1_g000002
rosa_roxburghii	Rroxscaffold_3G00238260 Rroxscaffold_4G00281110 Rroxscaffold_4G00281120
rosa_rugosa	Rorug01G0404400 Rorug01G0404500
rosa_samantha	Rh1AG428000 Rh1AG428100 Rh1AG428200 Rh1BG381100 Rh1BG381200 Rh1BG381300 Rh1CG000400 Rh1CG395100 Rh1CG395200 Rh1DG412100 Rh1DG412200 Rh1DG412300 Rh3DG181100 Rh7BG332800 Rh7DG340900
rosa_wichuraiana	Rw1G004050 Rw1G037050 Rw1G037070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1455
AccB7I	CCANNNNNTGG	1 cut(s)	438
AccII	CGCG	1 cut(s)	15
AccIII	TCCGGA	1 cut(s)	1482
AciI	CCGC	4 cut(s)	128, 347, 944, 1213
AcoI	YGGCCR	1 cut(s)	1175
AcsI	RAATTY	1 cut(s)	1153
AcyI	GRCGYC	1 cut(s)	1456
AfaI	GTAC	4 cut(s)	367, 421, 1289, 1355
AfiI	CCNNNNNNNGG	3 cut(s)	82, 438, 1086
AgsI	TTSAA	4 cut(s)	361, 525, 809, 1322
AhdI	GACNNNNNGTC	1 cut(s)	559
AhlI	ACTAGT	1 cut(s)	1001
AjiI	CACGTC	1 cut(s)	381
AjnI	CCWGG	3 cut(s)	720, 1238, 1243
AleI	CACNNNNGTG	1 cut(s)	1103
AluBI	AGCT	8 cut(s)	68, 416, 613, 767, 862, 1044, 1121, 1360
AluI	AGCT	8 cut(s)	68, 416, 613, 767, 862, 1044, 1121, 1360
Alw21I	GWGCWC	2 cut(s)	51, 447
Alw26I	GTCTC	6 cut(s)	15, 53, 955, 1199, 1276, 1404
Alw44I	GTGCAC	1 cut(s)	47
Aor13HI	TCCGGA	1 cut(s)	1482
AoxI	GGCC	6 cut(s)	157, 653, 867, 1175, 1241, 1408
ApaLI	GTGCAC	1 cut(s)	47
ApeKI	GCWGC	3 cut(s)	212, 695, 1343
ApoI	RAATTY	1 cut(s)	1153
AspLEI	GCGC	2 cut(s)	110, 1458
AspS9I	GGNCC	2 cut(s)	653, 867
AsuHPI	GGTGA	2 cut(s)	413, 859
AsuII	TTCGAA	1 cut(s)	472
BaeGI	GKGCMC	2 cut(s)	51, 732
BalI	TGGCCA	1 cut(s)	1177
BanI	GGYRCC	1 cut(s)	1455
BauI	CACGAG	1 cut(s)	56
BbsI	GAAGAC	1 cut(s)	828
Bbv12I	GWGCWC	2 cut(s)	51, 447
BbvCI	CCTCAGC	2 cut(s)	64, 858
BbvI	GCAGC	3 cut(s)	199, 707, 1355
BccI	CCATC	6 cut(s)	679, 741, 764, 788, 872, 878
BceAI	ACGGC	2 cut(s)	1423, 1443
BciT130I	CCWGG	3 cut(s)	722, 1240, 1245
BclI	TGATCA	1 cut(s)	775
BcoDI	GTCTC	6 cut(s)	15, 53, 955, 1199, 1276, 1404
BcuI	ACTAGT	1 cut(s)	1001
BfaI	CTAG	3 cut(s)	417, 534, 1002
BfmI	CTRYAG	2 cut(s)	1116, 1338
BfoI	RGCGCY	1 cut(s)	1459
BglI	GCCNNNNNGGC	1 cut(s)	796
BisI	GCNGC	3 cut(s)	213, 696, 1344
BlpI	GCTNAGC	1 cut(s)	768
BlsI	GCNGC	3 cut(s)	214, 697, 1345
BmcAI	AGTACT	1 cut(s)	421
Bme1390I	CCNGG	3 cut(s)	722, 1240, 1245
BmeRI	GACNNNNNGTC	1 cut(s)	559
BmgBI	CACGTC	1 cut(s)	381
BmgT120I	GGNCC	2 cut(s)	653, 867
BmiI	GGNNCC	5 cut(s)	568, 598, 654, 1457, 1481
BmrFI	CCNGG	3 cut(s)	722, 1240, 1245
BmrI	ACTGGG	1 cut(s)	1337
BmsI	GCATC	3 cut(s)	10, 1324, 1397
BmuI	ACTGGG	1 cut(s)	1337
BpiI	GAAGAC	1 cut(s)	828
BplI	GAGNNNNNCTC	1 cut(s)	27
BpmI	CTGGAG	2 cut(s)	615, 1119
Bpu10I	CCTNAGC	2 cut(s)	64, 858
Bpu1102I	GCTNAGC	1 cut(s)	768
Bpu14I	TTCGAA	1 cut(s)	472
Bsa29I	ATCGAT	1 cut(s)	543
BsaBI	GATNNNNATC	2 cut(s)	408, 1436
BsaHI	GRCGYC	1 cut(s)	1456
BsaI	GGTCTC	3 cut(s)	15, 53, 1199
BsaJI	CCNNGG	2 cut(s)	81, 720
BsaWI	WCCGGW	3 cut(s)	635, 844, 1482
Bsc4I	CCNNNNNNNGG	3 cut(s)	82, 438, 1086
Bse1I	ACTGG	2 cut(s)	1136, 1332
Bse3DI	GCAATG	3 cut(s)	207, 984, 1191
Bse8I	GATNNNNATC	2 cut(s)	408, 1436
BseAI	TCCGGA	1 cut(s)	1482
BseBI	CCWGG	3 cut(s)	722, 1240, 1245
BseCI	ATCGAT	1 cut(s)	543
BseDI	CCNNGG	2 cut(s)	81, 720
BseGI	GGATG	4 cut(s)	25, 374, 730, 1285
BseJI	GATNNNNATC	2 cut(s)	408, 1436
BseLI	CCNNNNNNNGG	3 cut(s)	82, 438, 1086
BseMI	GCAATG	3 cut(s)	207, 984, 1191
BseMII	CTCAG	5 cut(s)	78, 759, 872, 929, 1194
BseNI	ACTGG	2 cut(s)	1136, 1332
BseRI	GAGGAG	1 cut(s)	70
BseSI	GKGCMC	2 cut(s)	51, 732
BseXI	GCAGC	3 cut(s)	199, 707, 1355
BsgI	GTGCAG	1 cut(s)	198
Bsh1236I	CGCG	1 cut(s)	15
BshFI	GGCC	6 cut(s)	159, 655, 869, 1177, 1243, 1410
BshNI	GGYRCC	1 cut(s)	1455
BshVI	ATCGAT	1 cut(s)	543
BsiHKAI	GWGCWC	2 cut(s)	51, 447
BsiSI	CCGG	4 cut(s)	636, 845, 1068, 1483
BslI	CCNNNNNNNGG	3 cut(s)	82, 438, 1086
BsmAI	GTCTC	6 cut(s)	15, 53, 955, 1199, 1276, 1404
BsnI	GGCC	6 cut(s)	159, 655, 869, 1177, 1243, 1410
Bso31I	GGTCTC	3 cut(s)	15, 53, 1199
Bsp119I	TTCGAA	1 cut(s)	472
Bsp1286I	GDGCHC	3 cut(s)	51, 447, 732
Bsp13I	TCCGGA	1 cut(s)	1482
Bsp1407I	TGTACA	1 cut(s)	1353
Bsp143I	GATC	2 cut(s)	775, 1437
Bsp1720I	GCTNAGC	1 cut(s)	768
BspACI	CCGC	4 cut(s)	128, 347, 944, 1213
BspANI	GGCC	6 cut(s)	159, 655, 869, 1177, 1243, 1410
BspCNI	CTCAG	5 cut(s)	77, 760, 871, 930, 1195
BspDI	ATCGAT	1 cut(s)	543
BspEI	TCCGGA	1 cut(s)	1482
BspFNI	CGCG	1 cut(s)	15
BspLI	GGNNCC	5 cut(s)	568, 598, 654, 1457, 1481
BspT104I	TTCGAA	1 cut(s)	472
BspT107I	GGYRCC	1 cut(s)	1455
BspTNI	GGTCTC	3 cut(s)	15, 53, 1199
BsrDI	GCAATG	3 cut(s)	207, 984, 1191
BsrGI	TGTACA	1 cut(s)	1353
BsrI	ACTGG	2 cut(s)	1136, 1332
BssECI	CCNNGG	2 cut(s)	81, 720
BssMI	GATC	2 cut(s)	775, 1437
BssNI	GRCGYC	1 cut(s)	1456
BssSI	CACGAG	1 cut(s)	56
Bst2BI	CACGAG	1 cut(s)	56
Bst2UI	CCWGG	3 cut(s)	722, 1240, 1245
Bst6I	CTCTTC	1 cut(s)	958
BstACI	GRCGYC	1 cut(s)	1456
BstAPI	GCANNNNNTGC	1 cut(s)	1472
BstAUI	TGTACA	1 cut(s)	1353
BstBI	TTCGAA	1 cut(s)	472
BstC8I	GCNNGC	2 cut(s)	1029, 1412
BstDEI	CTNAG	6 cut(s)	64, 768, 858, 874, 938, 1203
BstF5I	GGATG	4 cut(s)	25, 374, 730, 1285
BstFNI	CGCG	1 cut(s)	15
BstH2I	RGCGCY	1 cut(s)	1459
BstHHI	GCGC	2 cut(s)	110, 1458
BstKTI	GATC	2 cut(s)	778, 1440
BstMAI	GTCTC	6 cut(s)	15, 53, 955, 1199, 1276, 1404
BstMBI	GATC	2 cut(s)	775, 1437
BstMWI	GCNNNNNNNGC	8 cut(s)	12, 221, 422, 778, 787, 796, 1343, 1472
BstNI	CCWGG	3 cut(s)	722, 1240, 1245
BstSCI	CCNGG	3 cut(s)	720, 1238, 1243
BstSFI	CTRYAG	2 cut(s)	1116, 1338
BstSLI	GKGCMC	2 cut(s)	51, 732
BstUI	CGCG	1 cut(s)	15
BstV1I	GCAGC	3 cut(s)	199, 707, 1355
BstV2I	GAAGAC	1 cut(s)	828
BstXI	CCANNNNNNTGG	1 cut(s)	640
Bsu15I	ATCGAT	1 cut(s)	543
BsuRI	GGCC	6 cut(s)	159, 655, 869, 1177, 1243, 1410
BsuTUI	ATCGAT	1 cut(s)	543
BtrI	CACGTC	1 cut(s)	381
BtsCI	GGATG	4 cut(s)	25, 374, 730, 1285
BtsIMutI	CAGTG	2 cut(s)	562, 1098
Cac8I	GCNNGC	2 cut(s)	1029, 1412
CfoI	GCGC	2 cut(s)	110, 1458
Cfr13I	GGNCC	2 cut(s)	653, 867
ClaI	ATCGAT	1 cut(s)	543
Csp6I	GTAC	4 cut(s)	366, 420, 1288, 1354
CviAII	CATG	3 cut(s)	34, 740, 991
CviQI	GTAC	4 cut(s)	366, 420, 1288, 1354
DdeI	CTNAG	6 cut(s)	64, 768, 858, 874, 938, 1203
DinI	GGCGCC	1 cut(s)	1457
DpnI	GATC	2 cut(s)	777, 1439
DpnII	GATC	2 cut(s)	775, 1437
DriI	GACNNNNNGTC	1 cut(s)	559
EaeI	YGGCCR	1 cut(s)	1175
Eam1104I	CTCTTC	1 cut(s)	958
Eam1105I	GACNNNNNGTC	1 cut(s)	559
EarI	CTCTTC	1 cut(s)	958
Eco147I	AGGCCT	2 cut(s)	159, 1243
Eco31I	GGTCTC	3 cut(s)	15, 53, 1199
Eco32I	GATATC	1 cut(s)	344
EcoRII	CCWGG	3 cut(s)	720, 1238, 1243
EcoRV	GATATC	1 cut(s)	344
EgeI	GGCGCC	1 cut(s)	1457
EheI	GGCGCC	1 cut(s)	1457
FaeI	CATG	3 cut(s)	37, 743, 994
FalI	AAGNNNNNCTT	2 cut(s)	1455, 1487
FatI	CATG	3 cut(s)	33, 739, 990
FauNDI	CATATG	1 cut(s)	1228
FbaI	TGATCA	1 cut(s)	775
Fnu4HI	GCNGC	3 cut(s)	213, 696, 1344
FokI	GGATG	4 cut(s)	32, 361, 737, 1292
Fsp4HI	GCNGC	3 cut(s)	213, 696, 1344
FspBI	CTAG	3 cut(s)	417, 534, 1002
GlaI	GCGC	2 cut(s)	109, 1457
GluI	GCNGC	3 cut(s)	213, 696, 1344
GsuI	CTGGAG	2 cut(s)	615, 1119
HaeII	RGCGCY	1 cut(s)	1459
HaeIII	GGCC	6 cut(s)	159, 655, 869, 1177, 1243, 1410
HapII	CCGG	4 cut(s)	636, 845, 1068, 1483
HhaI	GCGC	2 cut(s)	110, 1458
Hin1I	GRCGYC	1 cut(s)	1456
Hin1II	CATG	3 cut(s)	37, 743, 994
Hin6I	GCGC	2 cut(s)	108, 1456
HinP1I	GCGC	2 cut(s)	108, 1456
HinfI	GANTC	2 cut(s)	25, 560
HpaII	CCGG	4 cut(s)	636, 845, 1068, 1483
HphI	GGTGA	2 cut(s)	413, 859
Hpy166II	GTNNAC	1 cut(s)	49
Hpy188I	TCNGA	6 cut(s)	174, 201, 255, 761, 972, 1204
Hpy188III	TCNNGA	5 cut(s)	56, 134, 570, 1150, 1483
Hpy8I	GTNNAC	1 cut(s)	49
HpyAV	CCTTC	6 cut(s)	100, 134, 179, 355, 391, 1156
HpyCH4IV	ACGT	1 cut(s)	380
HpyCH4V	TGCA	9 cut(s)	49, 146, 215, 280, 425, 695, 1163, 1305, 1475
HpyF10VI	GCNNNNNNNGC	8 cut(s)	12, 221, 422, 778, 787, 796, 1343, 1472
HpyF3I	CTNAG	6 cut(s)	64, 768, 858, 874, 938, 1203
HpySE526I	ACGT	1 cut(s)	380
Hsp92I	GRCGYC	1 cut(s)	1456
Hsp92II	CATG	3 cut(s)	37, 743, 994
HspAI	GCGC	2 cut(s)	108, 1456
KasI	GGCGCC	1 cut(s)	1455
Kpn2I	TCCGGA	1 cut(s)	1482
Ksp22I	TGATCA	1 cut(s)	775
Kzo9I	GATC	2 cut(s)	775, 1437
LmnI	GCTCC	5 cut(s)	78, 442, 596, 1138, 1485
Lsp1109I	GCAGC	3 cut(s)	199, 707, 1355
LweI	GCATC	3 cut(s)	10, 1324, 1397
MaeI	CTAG	3 cut(s)	417, 534, 1002
MaeII	ACGT	1 cut(s)	380
MaeIII	GTNAC	6 cut(s)	40, 297, 351, 997, 1111, 1222
MalI	GATC	2 cut(s)	777, 1439
MboI	GATC	2 cut(s)	775, 1437
MboII	GAAGA	7 cut(s)	85, 88, 513, 828, 945, 1026, 1029
MhlI	GDGCHC	3 cut(s)	51, 447, 732
MlsI	TGGCCA	1 cut(s)	1177
MluCI	AATT	5 cut(s)	474, 510, 516, 1022, 1153
MluNI	TGGCCA	1 cut(s)	1177
Mly113I	GGCGCC	1 cut(s)	1456
MlyI	GAGTC	1 cut(s)	569
MnlI	CCTC	6 cut(s)	63, 73, 91, 736, 867, 1073
Mox20I	TGGCCA	1 cut(s)	1177
MroI	TCCGGA	1 cut(s)	1482
MscI	TGGCCA	1 cut(s)	1177
MseI	TTAA	5 cut(s)	275, 408, 504, 1377, 1501
MslI	CAYNNNNRTG	5 cut(s)	638, 738, 989, 1103, 1310
Msp20I	TGGCCA	1 cut(s)	1177
MspI	CCGG	4 cut(s)	636, 845, 1068, 1483
MspR9I	CCNGG	3 cut(s)	722, 1240, 1245
MvaI	CCWGG	3 cut(s)	722, 1240, 1245
MvnI	CGCG	1 cut(s)	15
MwoI	GCNNNNNNNGC	8 cut(s)	12, 221, 422, 778, 787, 796, 1343, 1472
NarI	GGCGCC	1 cut(s)	1456
NdeI	CATATG	1 cut(s)	1228
NdeII	GATC	2 cut(s)	775, 1437
NlaIII	CATG	3 cut(s)	37, 743, 994
NlaIV	GGNNCC	5 cut(s)	568, 598, 654, 1457, 1481
NmeAIII	GCCGAG	1 cut(s)	62
NmuCI	GTSAC	2 cut(s)	297, 351
NspV	TTCGAA	1 cut(s)	472
OliI	CACNNNNGTG	1 cut(s)	1103
PceI	AGGCCT	2 cut(s)	159, 1243
PcsI	WCGNNNNNNNCGW	1 cut(s)	170
PfeI	GAWTC	1 cut(s)	25
PflMI	CCANNNNNTGG	1 cut(s)	438
PkrI	GCNGC	3 cut(s)	214, 697, 1345
PleI	GAGTC	1 cut(s)	568
PluTI	GGCGCC	1 cut(s)	1459
PpsI	GAGTC	1 cut(s)	568
Psp6I	CCWGG	3 cut(s)	720, 1238, 1243
PspGI	CCWGG	3 cut(s)	720, 1238, 1243
PspN4I	GGNNCC	5 cut(s)	568, 598, 654, 1457, 1481
PspPI	GGNCC	2 cut(s)	653, 867
RsaI	GTAC	4 cut(s)	367, 421, 1289, 1355
RsaNI	GTAC	4 cut(s)	366, 420, 1288, 1354
RseI	CAYNNNNRTG	5 cut(s)	638, 738, 989, 1103, 1310
SaqAI	TTAA	5 cut(s)	275, 408, 504, 1377, 1501
SatI	GCNGC	3 cut(s)	213, 696, 1344
Sau3AI	GATC	2 cut(s)	775, 1437
Sau96I	GGNCC	2 cut(s)	653, 867
ScaI	AGTACT	1 cut(s)	421
SchI	GAGTC	1 cut(s)	569
ScrFI	CCNGG	3 cut(s)	722, 1240, 1245
SduI	GDGCHC	3 cut(s)	51, 447, 732
SfaNI	GCATC	3 cut(s)	10, 1324, 1397
SfcI	CTRYAG	2 cut(s)	1116, 1338
SfoI	GGCGCC	1 cut(s)	1457
SfuI	TTCGAA	1 cut(s)	472
SmiMI	CAYNNNNRTG	5 cut(s)	638, 738, 989, 1103, 1310
SpeI	ACTAGT	1 cut(s)	1001
Sse9I	AATT	5 cut(s)	474, 510, 516, 1022, 1153
SseBI	AGGCCT	2 cut(s)	159, 1243
SsiI	CCGC	4 cut(s)	128, 347, 944, 1213
SspDI	GGCGCC	1 cut(s)	1455
SspMI	CTAG	3 cut(s)	417, 534, 1002
StuI	AGGCCT	2 cut(s)	159, 1243
StyD4I	CCNGG	3 cut(s)	720, 1238, 1243
TaiI	ACGT	1 cut(s)	383
TaqI	TCGA	5 cut(s)	133, 164, 472, 543, 1151
TasI	AATT	5 cut(s)	474, 510, 516, 1022, 1153
TatI	WGTACW	3 cut(s)	419, 1287, 1353
TfiI	GAWTC	1 cut(s)	25
Tru1I	TTAA	5 cut(s)	275, 408, 504, 1377, 1501
Tru9I	TTAA	5 cut(s)	275, 408, 504, 1377, 1501
TscAI	CASTG	2 cut(s)	562, 1105
TseFI	GTSAC	2 cut(s)	297, 351
TseI	GCWGC	3 cut(s)	212, 695, 1343
Tsp45I	GTSAC	2 cut(s)	297, 351
TspDTI	ATGAA	8 cut(s)	88, 153, 321, 405, 866, 945, 1296, 1436
TspGWI	ACGGA	1 cut(s)	409
TspRI	CASTG	2 cut(s)	562, 1105
Van91I	CCANNNNNTGG	1 cut(s)	438
VneI	GTGCAC	1 cut(s)	47
XapI	RAATTY	1 cut(s)	1153
XspI	CTAG	3 cut(s)	417, 534, 1002
ZrmI	AGTACT	1 cut(s)	421

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.