Rh1BG381100

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000853
Physical Location & Seq
Forward (+)
51020204 .. 51021181
978 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG381100.1

Sequence Viewer

Length: 978 bp
ATGTTCTGCTTGCTGGTTCTCATGTGTTTTGGAGACAAACTCGACGAGAATCAGATCAATAAAATCGAAGAGGTCCAGCGGAGGATGCTCCTCAGCTTCAGCCGGTTCAACATCCTCAATTTCTGGCCTTCATTGACGAAAATCCTGCTCAAGAATCGCTGGCAGGAGTTCCTTCGGATCCGGAAAGCCCAAGAAGATGTCCTACTTCCTCTGATTCGAGCCCGAAAGGATGCCAATGTCAACAAGAGCGATGACTATGTACTGTCTTACGTCGACACTCTCTGGGACCTCGAGCTTCCCGACGAGAAGAGAAAGCTGACGGAAGATGAGATCATTAGCCTCTGTTCGGAGTTTCTCAATGCCGGAACCGATAGTACTTCCACCGCGCTGCAGTGGATCATGGCTAATATTGTGAAGTATCCGTCTGTGCAGGAGAGGCTTGTAGCGGAGATTAAAGGAGTGGTGGAGGAAACAGAGGAGGAGGTGGTGAAGGAGGAGGACTTGCAGAAGATGCCTTATTTGAAGGCGGTGGTGTTGGAGGGTTTAAGGCGCCACCCACCCGGCCACTTTGTGCTGCCGCATTCCGTCACGCACGACGTCGTTTTGGATGCTTATGTGGTACCAAAGAACGGGACGGTGAATTTCATGGTGGCGGATATGGGTTGGGATCCGGAGGTGTGGGAGGAGCCTATGGAGTTTAAGCCGGAGAGGTTTTTGAGTAAGGAGGGAGGAGATCAGGGGTTTGATATAACGGGGAGTAGAGAGATTAAGATGATGCCGTTTGGGGTTGGGAGGAGGATTTGCCCTGGTCTTGGGTTGGCGGTGCTTCATCTGGAGTATTTTGTGGCGAATTTGGTGTGGAAATTTGAGTGGAGAGGTGTGGAGGGAGAGGATGTTGACTTCGCGGAGAAGCAAGAGTTCACCATGGTCATGAGGAATCCATTGAAGGCAAACATTTCACCAAGAGTGATGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko00380 ko00830 ko00980 ko01100 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00830 map00980 map01100 map04913 map04917 map04927 map04934 map05204
Pfam Domains
Protein Families
p450

Protein Analysis

325

Amino Acids

37.71

Weight (kDa)

5.11

Isoelectric Point (pI)

51.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 8 - 317 6.2e-69 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 600
Acc65I GGTACC 1 cut(s) 619
AccB1I GGYRCC 2 cut(s) 549, 619
AccI GTMKAC 1 cut(s) 273
AccII CGCG 2 cut(s) 386, 905
AccIII TCCGGA 2 cut(s) 180, 670
AciI CCGC 8 cut(s) 79, 384, 446, 527, 578, 653, 821, 905
AclWI GGATC 5 cut(s) 172, 185, 404, 662, 675
AcoI YGGCCR 1 cut(s) 562
AcsI RAATTY 3 cut(s) 640, 850, 863
AcuI CTGAAG 1 cut(s) 82
AcyI GRCGYC 2 cut(s) 550, 597
AdeI CACNNNGTG 1 cut(s) 571
AfaI GTAC 3 cut(s) 261, 376, 621
AfiI CCNNNNNNNGG 3 cut(s) 346, 629, 812
AgsI TTSAA 3 cut(s) 109, 523, 946
AjnI CCWGG 1 cut(s) 805
AluBI AGCT 3 cut(s) 96, 295, 316
AluI AGCT 3 cut(s) 96, 295, 316
Alw26I GTCTC 1 cut(s) 27
AlwI GGATC 5 cut(s) 172, 185, 404, 662, 675
Ama87I CYCGRG 1 cut(s) 290
Aor13HI TCCGGA 2 cut(s) 180, 670
AoxI GGCC 2 cut(s) 125, 562
ApeKI GCWGC 2 cut(s) 388, 574
ApoI RAATTY 3 cut(s) 640, 850, 863
Asp718I GGTACC 1 cut(s) 619
AspLEI GCGC 2 cut(s) 388, 552
AspS9I GGNCC 2 cut(s) 73, 286
AsuC2I CCSGG 1 cut(s) 561
AsuHPI GGTGA 4 cut(s) 499, 649, 913, 951
AvaI CYCGRG 1 cut(s) 290
AvaII GGWCC 2 cut(s) 73, 286
BamHI GGATCC 2 cut(s) 177, 667
BanI GGYRCC 2 cut(s) 549, 619
BanII GRGCYC 1 cut(s) 223
BarI GAAGNNNNNNTAC 2 cut(s) 186, 218
BbvCI CCTCAGC 1 cut(s) 92
BbvI GCAGC 2 cut(s) 375, 561
BceAI ACGGC 1 cut(s) 763
BcgI CGANNNNNNTGC 2 cut(s) 127, 161
BciT130I CCWGG 1 cut(s) 807
BciVI GTATCC 1 cut(s) 429
BcnI CCSGG 1 cut(s) 561
BcoDI GTCTC 1 cut(s) 27
BfmI CTRYAG 1 cut(s) 389
BfoI RGCGCY 1 cut(s) 553
BfuI GTATCC 1 cut(s) 429
BisI GCNGC 3 cut(s) 389, 575, 578
BlsI GCNGC 3 cut(s) 390, 576, 579
BmcAI AGTACT 1 cut(s) 376
Bme1390I CCNGG 2 cut(s) 561, 807
Bme18I GGWCC 2 cut(s) 73, 286
BmeT110I CYCGRG 1 cut(s) 290
BmgT120I GGNCC 2 cut(s) 73, 286
BmiI GGNNCC 7 cut(s) 179, 287, 367, 551, 621, 669, 687
BmrFI CCNGG 2 cut(s) 561, 807
BmsI GCATC 5 cut(s) 75, 220, 501, 598, 765
BplI GAGNNNNNCTC 2 cut(s) 24, 56
BpmI CTGGAG 1 cut(s) 854
Bpu10I CCTNAGC 1 cut(s) 92
BpuEI CTTGAG 1 cut(s) 134
BpuMI CCSGG 1 cut(s) 561
BsaHI GRCGYC 2 cut(s) 550, 597
BsaJI CCNNGG 2 cut(s) 805, 924
BsaWI WCCGGW 2 cut(s) 180, 670
BsaXI ACNNNNNCTCC 2 cut(s) 879, 909
Bsc4I CCNNNNNNNGG 3 cut(s) 346, 629, 812
Bse118I RCCGGY 1 cut(s) 102
BseAI TCCGGA 2 cut(s) 180, 670
BseBI CCWGG 1 cut(s) 807
BseDI CCNNGG 2 cut(s) 805, 924
BseGI GGATG 5 cut(s) 90, 111, 235, 613, 898
BseLI CCNNNNNNNGG 3 cut(s) 346, 629, 812
BseMII CTCAG 1 cut(s) 106
BseRI GAGGAG 7 cut(s) 80, 491, 494, 509, 698, 744, 808
BseXI GCAGC 2 cut(s) 375, 561
BsgI GTGCAG 1 cut(s) 449
Bsh1236I CGCG 2 cut(s) 386, 905
BshFI GGCC 2 cut(s) 127, 564
BshNI GGYRCC 2 cut(s) 549, 619
BsiHKCI CYCGRG 1 cut(s) 290
BsiSI CCGG 6 cut(s) 103, 181, 363, 561, 671, 704
BslFI GGGAC 2 cut(s) 299, 646
BslI CCNNNNNNNGG 3 cut(s) 346, 629, 812
BsmAI GTCTC 1 cut(s) 27
BsmFI GGGAC 2 cut(s) 299, 646
BsmI GAATGC 1 cut(s) 580
BsnI GGCC 2 cut(s) 127, 564
BsoBI CYCGRG 1 cut(s) 290
Bsp1286I GDGCHC 1 cut(s) 223
Bsp13I TCCGGA 2 cut(s) 180, 670
Bsp143I GATC 6 cut(s) 54, 177, 330, 396, 667, 733
Bsp19I CCATGG 1 cut(s) 924
BspACI CCGC 8 cut(s) 79, 384, 446, 527, 578, 653, 821, 905
BspANI GGCC 2 cut(s) 127, 564
BspCNI CTCAG 1 cut(s) 105
BspEI TCCGGA 2 cut(s) 180, 670
BspFNI CGCG 2 cut(s) 386, 905
BspHI TCATGA 1 cut(s) 930
BspLI GGNNCC 7 cut(s) 179, 287, 367, 551, 621, 669, 687
BspMAI CTGCAG 1 cut(s) 393
BspPI GGATC 5 cut(s) 172, 185, 404, 662, 675
BspT107I GGYRCC 2 cut(s) 549, 619
BsrFI RCCGGY 1 cut(s) 102
BssAI RCCGGY 1 cut(s) 102
BssECI CCNNGG 2 cut(s) 805, 924
BssMI GATC 6 cut(s) 54, 177, 330, 396, 667, 733
BssNI GRCGYC 2 cut(s) 550, 597
BssT1I CCWWGG 1 cut(s) 924
Bst2UI CCWGG 1 cut(s) 807
Bst4CI ACNGT 2 cut(s) 264, 637
Bst6I CTCTTC 2 cut(s) 63, 302
BstACI GRCGYC 2 cut(s) 550, 597
BstAPI GCANNNNNTGC 1 cut(s) 511
BstC8I GCNNGC 2 cut(s) 11, 161
BstDEI CTNAG 1 cut(s) 92
BstDSI CCRYGG 1 cut(s) 924
BstF5I GGATG 5 cut(s) 90, 111, 235, 613, 898
BstFNI CGCG 2 cut(s) 386, 905
BstH2I RGCGCY 1 cut(s) 553
BstHHI GCGC 2 cut(s) 388, 552
BstKTI GATC 6 cut(s) 57, 180, 333, 399, 670, 736
BstMAI GTCTC 1 cut(s) 27
BstMBI GATC 6 cut(s) 54, 177, 330, 396, 667, 733
BstMWI GCNNNNNNNGC 3 cut(s) 85, 436, 511
BstNI CCWGG 1 cut(s) 807
BstSCI CCNGG 2 cut(s) 559, 805
BstSFI CTRYAG 1 cut(s) 389
BstUI CGCG 2 cut(s) 386, 905
BstV1I GCAGC 2 cut(s) 375, 561
BstX2I RGATCY 2 cut(s) 177, 667
BstYI RGATCY 2 cut(s) 177, 667
BsuI GTATCC 1 cut(s) 429
BsuRI GGCC 2 cut(s) 127, 564
BtgI CCRYGG 1 cut(s) 924
BtgZI GCGATG 1 cut(s) 264
BtsCI GGATG 5 cut(s) 90, 111, 235, 613, 898
BtsI GCAGTG 1 cut(s) 398
BtsIMutI CAGTG 1 cut(s) 398
Cac8I GCNNGC 2 cut(s) 11, 161
CciI TCATGA 1 cut(s) 930
CfoI GCGC 2 cut(s) 388, 552
Cfr10I RCCGGY 1 cut(s) 102
Cfr13I GGNCC 2 cut(s) 73, 286
Csp6I GTAC 3 cut(s) 260, 375, 620
CviAII CATG 5 cut(s) 22, 400, 646, 925, 931
CviQI GTAC 3 cut(s) 260, 375, 620
DdeI CTNAG 1 cut(s) 92
DinI GGCGCC 1 cut(s) 551
DpnI GATC 6 cut(s) 56, 179, 332, 398, 669, 735
DpnII GATC 6 cut(s) 54, 177, 330, 396, 667, 733
DraIII CACNNNGTG 1 cut(s) 571
EaeI YGGCCR 1 cut(s) 562
Eam1104I CTCTTC 2 cut(s) 63, 302
EarI CTCTTC 2 cut(s) 63, 302
EciI GGCGGA 1 cut(s) 668
Eco130I CCWWGG 1 cut(s) 924
Eco24I GRGCYC 1 cut(s) 223
Eco47I GGWCC 2 cut(s) 73, 286
Eco57I CTGAAG 1 cut(s) 82
Eco88I CYCGRG 1 cut(s) 290
EcoO109I RGGNCCY 1 cut(s) 286
EcoRII CCWGG 1 cut(s) 805
EcoT14I CCWWGG 1 cut(s) 924
EcoT38I GRGCYC 1 cut(s) 223
EgeI GGCGCC 1 cut(s) 551
EheI GGCGCC 1 cut(s) 551
ErhI CCWWGG 1 cut(s) 924
FaeI CATG 5 cut(s) 25, 403, 649, 928, 934
FaqI GGGAC 2 cut(s) 299, 646
FatI CATG 5 cut(s) 21, 399, 645, 924, 930
FblI GTMKAC 1 cut(s) 273
Fnu4HI GCNGC 3 cut(s) 389, 575, 578
FokI GGATG 5 cut(s) 97, 98, 242, 620, 905
FriOI GRGCYC 1 cut(s) 223
Fsp4HI GCNGC 3 cut(s) 389, 575, 578
GlaI GCGC 2 cut(s) 387, 551
GluI GCNGC 3 cut(s) 389, 575, 578
GsuI CTGGAG 1 cut(s) 854
HaeII RGCGCY 1 cut(s) 553
HaeIII GGCC 2 cut(s) 127, 564
HapII CCGG 6 cut(s) 103, 181, 363, 561, 671, 704
HhaI GCGC 2 cut(s) 388, 552
Hin1I GRCGYC 2 cut(s) 550, 597
Hin1II CATG 5 cut(s) 25, 403, 649, 928, 934
Hin6I GCGC 2 cut(s) 386, 550
HinP1I GCGC 2 cut(s) 386, 550
HincII GTYRAC 3 cut(s) 241, 274, 898
HindII GTYRAC 3 cut(s) 241, 274, 898
HinfI GANTC 4 cut(s) 49, 154, 214, 937
HpaII CCGG 6 cut(s) 103, 181, 363, 561, 671, 704
HphI GGTGA 4 cut(s) 499, 649, 913, 951
Hpy166II GTNNAC 4 cut(s) 241, 274, 898, 921
Hpy188I TCNGA 4 cut(s) 54, 177, 213, 349
Hpy188III TCNNGA 6 cut(s) 151, 181, 299, 671, 833, 931
Hpy8I GTNNAC 4 cut(s) 241, 274, 898, 921
Hpy99I CGWCG 5 cut(s) 47, 275, 305, 599, 602
HpyAV CCTTC 5 cut(s) 138, 182, 484, 517, 940
HpyCH4III ACNGT 2 cut(s) 264, 637
HpyCH4IV ACGT 2 cut(s) 270, 597
HpyCH4V TGCA 3 cut(s) 391, 430, 505
HpyF10VI GCNNNNNNNGC 3 cut(s) 85, 436, 511
HpyF3I CTNAG 1 cut(s) 92
HpySE526I ACGT 2 cut(s) 270, 597
Hsp92I GRCGYC 2 cut(s) 550, 597
Hsp92II CATG 5 cut(s) 25, 403, 649, 928, 934
HspAI GCGC 2 cut(s) 386, 550
KasI GGCGCC 1 cut(s) 549
Kpn2I TCCGGA 2 cut(s) 180, 670
KpnI GGTACC 1 cut(s) 623
Kzo9I GATC 6 cut(s) 54, 177, 330, 396, 667, 733
LmnI GCTCC 2 cut(s) 93, 685
Lsp1109I GCAGC 2 cut(s) 375, 561
LweI GCATC 5 cut(s) 75, 220, 501, 598, 765
MaeII ACGT 2 cut(s) 270, 597
MaeIII GTNAC 1 cut(s) 586
MalI GATC 6 cut(s) 56, 179, 332, 398, 669, 735
MboI GATC 6 cut(s) 54, 177, 330, 396, 667, 733
MboII GAAGA 5 cut(s) 80, 206, 319, 335, 520
MflI RGATCY 2 cut(s) 177, 667
MhlI GDGCHC 1 cut(s) 223
MluCI AATT 4 cut(s) 118, 640, 850, 863
Mly113I GGCGCC 1 cut(s) 550
MmeI TCCRAC 1 cut(s) 516
MroI TCCGGA 2 cut(s) 180, 670
MseI TTAA 4 cut(s) 453, 545, 699, 768
MslI CAYNNNNRTG 1 cut(s) 929
MspA1I CMGCKG 1 cut(s) 79
MspI CCGG 6 cut(s) 103, 181, 363, 561, 671, 704
MspR9I CCNGG 2 cut(s) 561, 807
Mva1269I GAATGC 1 cut(s) 580
MvaI CCWGG 1 cut(s) 807
MvnI CGCG 2 cut(s) 386, 905
MwoI GCNNNNNNNGC 3 cut(s) 85, 436, 511
NarI GGCGCC 1 cut(s) 550
NciI CCSGG 1 cut(s) 561
NcoI CCATGG 1 cut(s) 924
NdeII GATC 6 cut(s) 54, 177, 330, 396, 667, 733
NlaIII CATG 5 cut(s) 25, 403, 649, 928, 934
NlaIV GGNNCC 7 cut(s) 179, 287, 367, 551, 621, 669, 687
NmuCI GTSAC 1 cut(s) 586
PaeR7I CTCGAG 1 cut(s) 290
PagI TCATGA 1 cut(s) 930
PcsI WCGNNNNNNNCGW 1 cut(s) 297
PctI GAATGC 1 cut(s) 580
PfeI GAWTC 4 cut(s) 49, 154, 214, 937
PkrI GCNGC 3 cut(s) 390, 576, 579
PluTI GGCGCC 1 cut(s) 553
PpuMI RGGWCCY 1 cut(s) 286
Psp5II RGGWCCY 1 cut(s) 286
Psp6I CCWGG 1 cut(s) 805
PspGI CCWGG 1 cut(s) 805
PspN4I GGNNCC 7 cut(s) 179, 287, 367, 551, 621, 669, 687
PspPI GGNCC 2 cut(s) 73, 286
PspPPI RGGWCCY 1 cut(s) 286
PspXI VCTCGAGB 1 cut(s) 290
PsrI GAACNNNNNNTAC 2 cut(s) 358, 390
PstI CTGCAG 1 cut(s) 393
PsuI RGATCY 2 cut(s) 177, 667
RsaI GTAC 3 cut(s) 261, 376, 621
RsaNI GTAC 3 cut(s) 260, 375, 620
RseI CAYNNNNRTG 1 cut(s) 929
SalI GTCGAC 1 cut(s) 272
SaqAI TTAA 4 cut(s) 453, 545, 699, 768
SatI GCNGC 3 cut(s) 389, 575, 578
Sau3AI GATC 6 cut(s) 54, 177, 330, 396, 667, 733
Sau96I GGNCC 2 cut(s) 73, 286
ScaI AGTACT 1 cut(s) 376
ScrFI CCNGG 2 cut(s) 561, 807
SduI GDGCHC 1 cut(s) 223
SfaNI GCATC 5 cut(s) 75, 220, 501, 598, 765
SfcI CTRYAG 1 cut(s) 389
SfoI GGCGCC 1 cut(s) 551
Sfr274I CTCGAG 1 cut(s) 290
SinI GGWCC 2 cut(s) 73, 286
SlaI CTCGAG 1 cut(s) 290
SmiMI CAYNNNNRTG 1 cut(s) 929
SmlI CTYRAG 2 cut(s) 149, 290
SmoI CTYRAG 2 cut(s) 149, 290
Sse9I AATT 4 cut(s) 118, 640, 850, 863
SsiI CCGC 8 cut(s) 79, 384, 446, 527, 578, 653, 821, 905
SspDI GGCGCC 1 cut(s) 549
SspI AATATT 1 cut(s) 409
StyD4I CCNGG 2 cut(s) 559, 805
StyI CCWWGG 1 cut(s) 924
TaaI ACNGT 2 cut(s) 264, 637
TaiI ACGT 2 cut(s) 273, 600
TaqI TCGA 5 cut(s) 42, 66, 217, 273, 291
TasI AATT 4 cut(s) 118, 640, 850, 863
TatI WGTACW 2 cut(s) 259, 374
TauI GCSGC 1 cut(s) 580
TfiI GAWTC 4 cut(s) 49, 154, 214, 937
Tru1I TTAA 4 cut(s) 453, 545, 699, 768
Tru9I TTAA 4 cut(s) 453, 545, 699, 768
TscAI CASTG 1 cut(s) 398
TseFI GTSAC 1 cut(s) 586
TseI GCWGC 2 cut(s) 388, 574
Tsp45I GTSAC 1 cut(s) 586
TspDTI ATGAA 3 cut(s) 120, 634, 818
TspGWI ACGGA 3 cut(s) 335, 411, 574
TspRI CASTG 1 cut(s) 398
VpaK11BI GGWCC 2 cut(s) 73, 286
XapI RAATTY 3 cut(s) 640, 850, 863
XhoI CTCGAG 1 cut(s) 290
XmiI GTMKAC 1 cut(s) 273
ZraI GACGTC 1 cut(s) 598
ZrmI AGTACT 1 cut(s) 376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.