AT5G61320

cytochrome P450

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
24655098 .. 24656638
1541 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G61320.1

Sequence Viewer

Length: 1494 bp
ATGGCGACATGGTTTCACATCTTCTGCGTCTCTTTCACAGTCAACTTCCTTCTATATCTCTTCTTCCGCAGAACTAACAACAATCTTCCTCTACCTCCGAACCCTAACTTCTTCCCCATGCCTGGTCCCTTCCAGTGGCTCCGTCAAGGCTTCGATGATTTCTACTCCTATCTCCGCTCCATCCACCACCGTCTCGGCCCAATCATCTCTCTCCGCATCTTTTCCGTCCCTGCCATCTTCGTCTCTGATCGTTCCTTGGCTCACAAGGCTCTTGTTTTAAACGGCGCCGTATTCTCTGATCGTCCACCGGCGCTTCCTACCGGAAAGATCATCACTAGTAACCAACACACCATCAGCTCAGGATCATACGGAGCTACGTGGCGACTTCTCCGTCGTAATCTCACCTCCGAGATTCTTCATCCATCCCGTGTCAAATCTTATTCCAACGCTCGTCGCTCTGTTCTTGAAAACCTCTGTTCTCGAATTCGTAATCACGGGGAAGAAGCAAAACCGATCGTCGTCGTTGATCATCTCCGTTATGCAATGTTCTCGCTTCTTGTTCTCATGTGTTTCGGAGATAAGCTTGACGAAGAACAGATCAAACAAGTCGAATTCGTTCAAAGAAGAGAGCTCATCACGTTACCAAGATTCAACATCCTCAATGTCTTCCCTAGTTTCACCAAGTTGTTTCTGAGAAAGAGATGGGAAGAGTTTCTTACGTTCAGGAGAGAACACAAGAACGTCTTGCTTCCGTTGATTCGTTCCCGGAGAAAGATCATGATCGAATCTAAAGATTCCGGTAAAGAATACATACAATCGTATGTAGATACTCTGCTCGATCTTGAGCTTCCTGATGAGAAGAGGAAACTAAACGAAGACGAGATCGTGAGTTTATGCTCTGAGTTTCTCAACGCCGGGACTGATACAACAGCGACGACACTTCAATGGATAATGGCGAATCTTGTAATCGGTGAAGAAGAAGAGAAGGAGATTGAAGAAGAAGAGATGAAGAAGATGCCGTATCTTAAAGCTGTCGTGTTAGAAGGTCTCCGGTTACATCCACCGGGACATTTGTTGTTACCACACAGAGTAAGTGAAGACACTGAGCTAGGAGGATACAGAGTTCCAAAGAAAGGGACGTTTAATATCAATGTGGCGATGATAGGGAGAGATCCAACAGTGTGGGAGGAGCCAATGGAGTTTAAGCCGGAGAGATTCATCGGAGAAGATAAAGAAGTTGATGTTACTGGAAGTAGAGGGATAAAGATGATGCCGTTTGGAGCAGGAAGGAGGATCTGTCCAGGGATTGGATCGGCCATGTTGCATTTGGAGTATTTTGTGGTGAATTTGGTTAAAGAGTTTGAGTGGAAAGAAGTTGAAGGTTATGAAGTTGACTTGTCTGAGAAATGGGAGTTCACTGTTGTTATGAAGTATCCTCTTAAAGCTCTTGCTGTGACAAGAAGGAAGGAGAAGACACATATCGTCATGGCTTAG

Protein Analysis

497

Amino Acids

57.74

Weight (kDa)

8.74

Isoelectric Point (pI)

54.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 32 - 477 4.7e-83 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 390
AccB1I GGYRCC 1 cut(s) 284
AccB7I CCANNNNNTGG 1 cut(s) 1307
AccBSI CCGCTC 1 cut(s) 177
AciI CCGC 3 cut(s) 67, 175, 214
AclWI GGATC 4 cut(s) 370, 1166, 1301, 1318
AcoI YGGCCR 1 cut(s) 1314
AcsI RAATTY 3 cut(s) 483, 611, 1345
AcyI GRCGYC 1 cut(s) 285
AfiI CCNNNNNNNGG 4 cut(s) 122, 135, 1133, 1307
AgsI TTSAA 6 cut(s) 467, 620, 652, 944, 995, 1379
AhlI ACTAGT 1 cut(s) 335
AjnI CCWGG 2 cut(s) 121, 1300
AloI GAACNNNNNNTCC 2 cut(s) 1107, 1139
AluBI AGCT 8 cut(s) 357, 374, 583, 631, 847, 1031, 1108, 1445
AluI AGCT 8 cut(s) 357, 374, 583, 631, 847, 1031, 1108, 1445
Alw21I GWGCWC 1 cut(s) 633
Alw26I GTCTC 4 cut(s) 34, 197, 247, 1052
AlwI GGATC 4 cut(s) 370, 1166, 1301, 1318
AoxI GGCC 2 cut(s) 196, 1314
ApoI RAATTY 3 cut(s) 483, 611, 1345
Asp700I GAANNNNTTC 2 cut(s) 615, 711
AspLEI GCGC 2 cut(s) 287, 313
AspS9I GGNCC 2 cut(s) 125, 197
AsuC2I CCSGG 3 cut(s) 766, 916, 1065
AsuHPI GGTGA 4 cut(s) 394, 670, 983, 1354
AvaII GGWCC 1 cut(s) 125
BanI GGYRCC 1 cut(s) 284
BanII GRGCYC 1 cut(s) 633
BbsI GAAGAC 4 cut(s) 658, 882, 1104, 1478
Bbv12I GWGCWC 1 cut(s) 633
BccI CCATC 5 cut(s) 188, 242, 359, 430, 696
BceAI ACGGC 4 cut(s) 272, 298, 1003, 1258
BcgI CGANNNNNNTGC 2 cut(s) 531, 565
BciT130I CCWGG 2 cut(s) 123, 1302
BciVI GTATCC 2 cut(s) 1109, 1443
BclI TGATCA 1 cut(s) 526
BcnI CCSGG 3 cut(s) 766, 916, 1065
BcoDI GTCTC 4 cut(s) 34, 197, 247, 1052
BcuI ACTAGT 1 cut(s) 335
BfaI CTAG 3 cut(s) 336, 672, 1109
BfoI RGCGCY 2 cut(s) 288, 314
BfuI GTATCC 2 cut(s) 1109, 1443
Bme1390I CCNGG 5 cut(s) 123, 766, 916, 1065, 1302
Bme18I GGWCC 1 cut(s) 125
BmgT120I GGNCC 2 cut(s) 125, 197
BmiI GGNNCC 4 cut(s) 127, 140, 286, 1191
BmrFI CCNGG 5 cut(s) 123, 766, 916, 1065, 1302
BmsI GCATC 3 cut(s) 225, 1005, 1260
BpiI GAAGAC 4 cut(s) 658, 882, 1104, 1478
Bpu10I CCTNAGC 1 cut(s) 358
BpuEI CTTGAG 1 cut(s) 863
BpuMI CCSGG 3 cut(s) 766, 916, 1065
BsaAI YACGTR 1 cut(s) 378
BsaBI GATNNNNATC 1 cut(s) 779
BsaHI GRCGYC 1 cut(s) 285
BsaI GGTCTC 1 cut(s) 1052
BsaJI CCNNGG 2 cut(s) 255, 1301
BsaWI WCCGGW 3 cut(s) 320, 797, 1050
BsaXI ACNNNNNCTCC 2 cut(s) 1282, 1312
Bsc4I CCNNNNNNNGG 4 cut(s) 122, 135, 1133, 1307
Bse118I RCCGGY 1 cut(s) 307
Bse1I ACTGG 2 cut(s) 133, 1252
Bse3DI GCAATG 1 cut(s) 549
Bse8I GATNNNNATC 1 cut(s) 779
BseBI CCWGG 2 cut(s) 123, 1302
BseDI CCNNGG 2 cut(s) 255, 1301
BseGI GGATG 5 cut(s) 180, 418, 422, 654, 1057
BseJI GATNNNNATC 1 cut(s) 779
BseLI CCNNNNNNNGG 4 cut(s) 122, 135, 1133, 1307
BseMI GCAATG 1 cut(s) 549
BseMII CTCAG 5 cut(s) 372, 683, 891, 1095, 1392
BseNI ACTGG 2 cut(s) 133, 1252
BseRI GAGGAG 1 cut(s) 1202
Bsh1285I CGRYCG 1 cut(s) 516
BshFI GGCC 2 cut(s) 198, 1316
BshNI GGYRCC 1 cut(s) 284
BsiEI CGRYCG 1 cut(s) 516
BsiHKAI GWGCWC 1 cut(s) 633
BsiSI CCGG 8 cut(s) 308, 321, 766, 798, 915, 1051, 1064, 1208
BslFI GGGAC 5 cut(s) 111, 212, 931, 1080, 1150
BslI CCNNNNNNNGG 4 cut(s) 122, 135, 1133, 1307
BsmAI GTCTC 4 cut(s) 34, 197, 247, 1052
BsmBI CGTCTC 3 cut(s) 34, 197, 247
BsmFI GGGAC 5 cut(s) 111, 212, 931, 1080, 1150
BsnI GGCC 2 cut(s) 198, 1316
Bso31I GGTCTC 1 cut(s) 1052
Bsp1286I GDGCHC 1 cut(s) 633
BspACI CCGC 3 cut(s) 67, 175, 214
BspANI GGCC 2 cut(s) 198, 1316
BspCNI CTCAG 5 cut(s) 371, 684, 892, 1096, 1393
BspHI TCATGA 1 cut(s) 777
BspLI GGNNCC 4 cut(s) 127, 140, 286, 1191
BspPI GGATC 4 cut(s) 370, 1166, 1301, 1318
BspT107I GGYRCC 1 cut(s) 284
BspTNI GGTCTC 1 cut(s) 1052
BsrBI CCGCTC 1 cut(s) 177
BsrDI GCAATG 1 cut(s) 549
BsrFI RCCGGY 1 cut(s) 307
BsrI ACTGG 2 cut(s) 133, 1252
BssAI RCCGGY 1 cut(s) 307
BssECI CCNNGG 2 cut(s) 255, 1301
BssNI GRCGYC 1 cut(s) 285
BssT1I CCWWGG 1 cut(s) 255
Bst2UI CCWGG 2 cut(s) 123, 1302
Bst4CI ACNGT 4 cut(s) 40, 191, 1180, 1420
Bst6I CTCTTC 6 cut(s) 65, 619, 702, 854, 975, 996
BstACI GRCGYC 1 cut(s) 285
BstBAI YACGTR 1 cut(s) 378
BstDEI CTNAG 6 cut(s) 358, 692, 900, 1104, 1401, 1491
BstF5I GGATG 5 cut(s) 180, 418, 422, 654, 1057
BstH2I RGCGCY 2 cut(s) 288, 314
BstHHI GCGC 2 cut(s) 287, 313
BstMAI GTCTC 4 cut(s) 34, 197, 247, 1052
BstMCI CGRYCG 1 cut(s) 516
BstMWI GCNNNNNNNGC 1 cut(s) 266
BstNI CCWGG 2 cut(s) 123, 1302
BstSCI CCNGG 5 cut(s) 121, 764, 914, 1063, 1300
BstV2I GAAGAC 4 cut(s) 658, 882, 1104, 1478
BstX2I RGATCY 2 cut(s) 1171, 1293
BstXI CCANNNNNNTGG 1 cut(s) 1182
BstYI RGATCY 2 cut(s) 1171, 1293
BsuI GTATCC 2 cut(s) 1109, 1443
BsuRI GGCC 2 cut(s) 198, 1316
BtgZI GCGATG 1 cut(s) 1172
BtsCI GGATG 5 cut(s) 180, 418, 422, 654, 1057
BtsIMutI CAGTG 4 cut(s) 140, 1101, 1185, 1416
CciI TCATGA 1 cut(s) 777
CfoI GCGC 2 cut(s) 287, 313
Cfr10I RCCGGY 1 cut(s) 307
Cfr13I GGNCC 2 cut(s) 125, 197
CseI GACGC 1 cut(s) 16
CviAII CATG 6 cut(s) 9, 118, 565, 778, 1318, 1486
DdeI CTNAG 6 cut(s) 358, 692, 900, 1104, 1401, 1491
DinI GGCGCC 1 cut(s) 286
DraI TTTAAA 1 cut(s) 279
DrdI GACNNNNNNGTC 1 cut(s) 390
DseDI GACNNNNNNGTC 1 cut(s) 390
EaeI YGGCCR 1 cut(s) 1314
Eam1104I CTCTTC 6 cut(s) 65, 619, 702, 854, 975, 996
EarI CTCTTC 6 cut(s) 65, 619, 702, 854, 975, 996
Ecl136II GAGCTC 1 cut(s) 631
Eco130I CCWWGG 1 cut(s) 255
Eco24I GRGCYC 1 cut(s) 633
Eco31I GGTCTC 1 cut(s) 1052
Eco47I GGWCC 1 cut(s) 125
Eco53kI GAGCTC 1 cut(s) 631
EcoICRI GAGCTC 1 cut(s) 631
EcoRI GAATTC 2 cut(s) 483, 611
EcoRII CCWGG 2 cut(s) 121, 1300
EcoT14I CCWWGG 1 cut(s) 255
EcoT38I GRGCYC 1 cut(s) 633
EgeI GGCGCC 1 cut(s) 286
EheI GGCGCC 1 cut(s) 286
ErhI CCWWGG 1 cut(s) 255
Esp3I CGTCTC 3 cut(s) 34, 197, 247
FaeI CATG 6 cut(s) 12, 121, 568, 781, 1321, 1489
FalI AAGNNNNNCTT 4 cut(s) 699, 731, 728, 760
FaqI GGGAC 5 cut(s) 111, 212, 931, 1080, 1150
FatI CATG 6 cut(s) 8, 117, 564, 777, 1317, 1485
FbaI TGATCA 1 cut(s) 526
FokI GGATG 5 cut(s) 167, 405, 409, 641, 1044
FriOI GRGCYC 1 cut(s) 633
FspBI CTAG 3 cut(s) 336, 672, 1109
GlaI GCGC 2 cut(s) 286, 312
HaeII RGCGCY 2 cut(s) 288, 314
HaeIII GGCC 2 cut(s) 198, 1316
HapII CCGG 8 cut(s) 308, 321, 766, 798, 915, 1051, 1064, 1208
HgaI GACGC 1 cut(s) 16
HhaI GCGC 2 cut(s) 287, 313
Hin1I GRCGYC 1 cut(s) 285
Hin1II CATG 6 cut(s) 12, 121, 568, 781, 1321, 1489
Hin6I GCGC 2 cut(s) 285, 311
HinP1I GCGC 2 cut(s) 285, 311
HincII GTYRAC 2 cut(s) 43, 1393
HindII GTYRAC 2 cut(s) 43, 1393
HindIII AAGCTT 1 cut(s) 581
HinfI GANTC 7 cut(s) 412, 648, 757, 785, 794, 958, 1215
HpaII CCGG 8 cut(s) 308, 321, 766, 798, 915, 1051, 1064, 1208
HphI GGTGA 4 cut(s) 394, 670, 983, 1354
Hpy166II GTNNAC 4 cut(s) 43, 305, 1393, 1416
Hpy188I TCNGA 9 cut(s) 99, 247, 298, 409, 575, 693, 901, 1223, 1402
Hpy188III TCNNGA 8 cut(s) 360, 464, 480, 724, 778, 842, 851, 886
Hpy8I GTNNAC 4 cut(s) 43, 305, 1393, 1416
Hpy99I CGWCG 5 cut(s) 396, 456, 521, 524, 937
HpyAV CCTTC 8 cut(s) 59, 139, 979, 1037, 1281, 1373, 1455, 1459
HpyCH4III ACNGT 4 cut(s) 40, 191, 1180, 1420
HpyCH4IV ACGT 5 cut(s) 377, 638, 719, 741, 1139
HpyCH4V TGCA 2 cut(s) 542, 1324
HpyF10VI GCNNNNNNNGC 1 cut(s) 266
HpyF3I CTNAG 6 cut(s) 358, 692, 900, 1104, 1401, 1491
HpySE526I ACGT 5 cut(s) 377, 638, 719, 741, 1139
Hsp92I GRCGYC 1 cut(s) 285
Hsp92II CATG 6 cut(s) 12, 121, 568, 781, 1321, 1489
HspAI GCGC 2 cut(s) 285, 311
KasI GGCGCC 1 cut(s) 284
Ksp22I TGATCA 1 cut(s) 526
LmnI GCTCC 5 cut(s) 144, 182, 371, 1189, 1280
LweI GCATC 3 cut(s) 225, 1005, 1260
MaeI CTAG 3 cut(s) 336, 672, 1109
MaeII ACGT 5 cut(s) 377, 638, 719, 741, 1139
MaeIII GTNAC 6 cut(s) 338, 639, 1053, 1077, 1243, 1453
MbiI CCGCTC 1 cut(s) 177
MflI RGATCY 2 cut(s) 1171, 1293
MhlI GDGCHC 1 cut(s) 633
MluCI AATT 3 cut(s) 483, 611, 1345
Mly113I GGCGCC 1 cut(s) 285
MmeI TCCRAC 2 cut(s) 468, 1199
MroXI GAANNNNTTC 2 cut(s) 615, 711
MseI TTAA 6 cut(s) 278, 1026, 1143, 1203, 1353, 1440
MslI CAYNNNNRTG 1 cut(s) 943
MspI CCGG 8 cut(s) 308, 321, 766, 798, 915, 1051, 1064, 1208
MspR9I CCNGG 5 cut(s) 123, 766, 916, 1065, 1302
MvaI CCWGG 2 cut(s) 123, 1302
MwoI GCNNNNNNNGC 1 cut(s) 266
NarI GGCGCC 1 cut(s) 285
NciI CCSGG 3 cut(s) 766, 916, 1065
NlaIII CATG 6 cut(s) 12, 121, 568, 781, 1321, 1489
NlaIV GGNNCC 4 cut(s) 127, 140, 286, 1191
NmeAIII GCCGAG 1 cut(s) 174
NmuCI GTSAC 1 cut(s) 1453
PagI TCATGA 1 cut(s) 777
PdmI GAANNNNTTC 2 cut(s) 615, 711
PfeI GAWTC 7 cut(s) 412, 648, 757, 785, 794, 958, 1215
PflMI CCANNNNNTGG 1 cut(s) 1307
PfoI TCCNGGA 1 cut(s) 764
Ple19I CGATCG 1 cut(s) 516
PluTI GGCGCC 1 cut(s) 288
Ppu21I YACGTR 1 cut(s) 378
Psp124BI GAGCTC 1 cut(s) 633
Psp6I CCWGG 2 cut(s) 121, 1300
PspGI CCWGG 2 cut(s) 121, 1300
PspN4I GGNNCC 4 cut(s) 127, 140, 286, 1191
PspPI GGNCC 2 cut(s) 125, 197
PsuI RGATCY 2 cut(s) 1171, 1293
PvuI CGATCG 1 cut(s) 516
RseI CAYNNNNRTG 1 cut(s) 943
SacI GAGCTC 1 cut(s) 633
SaqAI TTAA 6 cut(s) 278, 1026, 1143, 1203, 1353, 1440
Sau96I GGNCC 2 cut(s) 125, 197
ScrFI CCNGG 5 cut(s) 123, 766, 916, 1065, 1302
SduI GDGCHC 1 cut(s) 633
SfaNI GCATC 3 cut(s) 225, 1005, 1260
SfoI GGCGCC 1 cut(s) 286
SgrAI CRCCGGYG 1 cut(s) 307
SinI GGWCC 1 cut(s) 125
SmiMI CAYNNNNRTG 1 cut(s) 943
SmlI CTYRAG 1 cut(s) 842
SmoI CTYRAG 1 cut(s) 842
SpeI ACTAGT 1 cut(s) 335
Sse9I AATT 3 cut(s) 483, 611, 1345
SsiI CCGC 3 cut(s) 67, 175, 214
SspDI GGCGCC 1 cut(s) 284
SspMI CTAG 3 cut(s) 336, 672, 1109
SstI GAGCTC 1 cut(s) 633
StyD4I CCNGG 5 cut(s) 121, 764, 914, 1063, 1300
StyI CCWWGG 1 cut(s) 255
TaaI ACNGT 4 cut(s) 40, 191, 1180, 1420
TaiI ACGT 5 cut(s) 380, 641, 722, 744, 1142
TaqI TCGA 5 cut(s) 153, 481, 609, 783, 837
TasI AATT 3 cut(s) 483, 611, 1345
TfiI GAWTC 7 cut(s) 412, 648, 757, 785, 794, 958, 1215
Tru1I TTAA 6 cut(s) 278, 1026, 1143, 1203, 1353, 1440
Tru9I TTAA 6 cut(s) 278, 1026, 1143, 1203, 1353, 1440
TscAI CASTG 4 cut(s) 140, 1108, 1185, 1423
TseFI GTSAC 1 cut(s) 1453
Tsp45I GTSAC 1 cut(s) 1453
TspDTI ATGAA 5 cut(s) 407, 1022, 1207, 1401, 1442
TspGWI ACGGA 6 cut(s) 131, 214, 380, 384, 524, 741
TspRI CASTG 4 cut(s) 140, 1108, 1185, 1423
Van91I CCANNNNNTGG 1 cut(s) 1307
VpaK11BI GGWCC 1 cut(s) 125
XapI RAATTY 3 cut(s) 483, 611, 1345
XcmI CCANNNNNNNNNTGG 1 cut(s) 1324
XmnI GAANNNNTTC 2 cut(s) 615, 711
XspI CTAG 3 cut(s) 336, 672, 1109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.