Rmu_sc0002832.1_g000018

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002832.1
OG0000853
Physical Location & Seq
Forward (+)
102622 .. 103596
975 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002832.1_g000018.1.cds

Sequence Viewer

Length: 975 bp
atgttctgcttgctggttctcatgtgttttggagacaaactcgacgagaaccagatcaataaaatcgaagaagtccagcggagactcctcctcagcttcagccggttcaacatcctcaatttctggccttcattgacaaaaatagtcctcaagaatcgctggcaggagttctttcgaatccgaaaagcccaagaagatgtcctgcttcctctgattcgagcccgcaaggatgccaatgtcaacaagagcgatgactatgtactgtcttacgtcgacactctctgggacctcgagcttcccgacgagaagaggaagctgacggaggacgagatcattagcctctgttcggagtttctcaatgccggaaccgatactacttccaccgcgctgcagtggatcatggccaatattgtgaagtatccatctgtccaggagaggctgcttgcggagattcaaggagttgtggaggaaacagaggaggaggtgaaggaggaggacttgcagaagatgccttatttaaaggcggtggtgttggagggtttaaggcgccacccacccggccactttgtgctgccgcattccgtcacgcacgacgtcgtcttggatggttacgtggtaccaaagaaggggacggtgaatttcatggtggcggatatgggttgggacccggaggtgtgggaggagcctatggagtttaagccggagaggtttttgagtaaggagggaggagatcagggttttgatataacggggagtagagagattaagatgatgccgtttggggttgggaggaggatttgccctggtcttgggttggctgtgcttcatctggagtattttgtggcgaatttggtgtggaaattcgagtggagaggtgtggagggagaggatgttgacttcgcggagaagcaagagttcaccatggtcatgaggaatccattgaaggcgaacatttcacccagagtgatgagatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko00380 ko00830 ko00980 ko01100 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00830 map00980 map01100 map04913 map04917 map04927 map04934 map05204
Pfam Domains
Protein Families
p450

Protein Analysis

324

Amino Acids

37.65

Weight (kDa)

5.11

Isoelectric Point (pI)

49.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 597
Acc65I GGTACC 1 cut(s) 616
AccB1I GGYRCC 2 cut(s) 546, 616
AccI GTMKAC 1 cut(s) 273
AccII CGCG 2 cut(s) 386, 902
AciI CCGC 8 cut(s) 79, 223, 384, 446, 524, 575, 650, 902
AclWI GGATC 1 cut(s) 404
AcoI YGGCCR 2 cut(s) 402, 559
AcsI RAATTY 3 cut(s) 637, 847, 860
AcuI CTGAAG 1 cut(s) 82
AcyI GRCGYC 2 cut(s) 547, 594
AdeI CACNNNGTG 1 cut(s) 568
AfaI GTAC 2 cut(s) 261, 618
AfiI CCNNNNNNNGG 3 cut(s) 346, 626, 809
AgsI TTSAA 3 cut(s) 109, 455, 943
AjnI CCWGG 2 cut(s) 429, 802
AluBI AGCT 3 cut(s) 96, 295, 316
AluI AGCT 3 cut(s) 96, 295, 316
Alw26I GTCTC 2 cut(s) 27, 76
AlwI GGATC 1 cut(s) 404
Ama87I CYCGRG 1 cut(s) 290
AoxI GGCC 3 cut(s) 125, 402, 559
ApeKI GCWGC 3 cut(s) 388, 439, 571
ApoI RAATTY 3 cut(s) 637, 847, 860
Asp718I GGTACC 1 cut(s) 616
AspLEI GCGC 2 cut(s) 388, 549
AspS9I GGNCC 2 cut(s) 286, 664
AsuC2I CCSGG 2 cut(s) 558, 668
AsuHPI GGTGA 4 cut(s) 496, 646, 910, 948
AsuII TTCGAA 1 cut(s) 175
AvaI CYCGRG 1 cut(s) 290
AvaII GGWCC 2 cut(s) 286, 664
BalI TGGCCA 1 cut(s) 404
BanI GGYRCC 2 cut(s) 546, 616
BanII GRGCYC 1 cut(s) 223
BbvCI CCTCAGC 1 cut(s) 92
BbvI GCAGC 3 cut(s) 375, 426, 558
BccI CCATC 2 cut(s) 430, 599
BceAI ACGGC 1 cut(s) 760
BciT130I CCWGG 2 cut(s) 431, 804
BciVI GTATCC 1 cut(s) 429
BcnI CCSGG 2 cut(s) 558, 668
BcoDI GTCTC 2 cut(s) 27, 76
BfmI CTRYAG 1 cut(s) 389
BfoI RGCGCY 1 cut(s) 550
BfuI GTATCC 1 cut(s) 429
BisI GCNGC 4 cut(s) 389, 440, 572, 575
BlsI GCNGC 4 cut(s) 390, 441, 573, 576
Bme1390I CCNGG 4 cut(s) 431, 558, 668, 804
Bme18I GGWCC 2 cut(s) 286, 664
BmeT110I CYCGRG 1 cut(s) 290
BmgT120I GGNCC 2 cut(s) 286, 664
BmiI GGNNCC 7 cut(s) 287, 367, 548, 618, 665, 666, 684
BmrFI CCNGG 4 cut(s) 431, 558, 668, 804
BmsI GCATC 3 cut(s) 220, 498, 762
BplI GAGNNNNNCTC 2 cut(s) 24, 56
BpmI CTGGAG 1 cut(s) 851
Bpu10I CCTNAGC 1 cut(s) 92
Bpu14I TTCGAA 1 cut(s) 175
BpuEI CTTGAG 1 cut(s) 134
BpuMI CCSGG 2 cut(s) 558, 668
BsaAI YACGTR 1 cut(s) 613
BsaHI GRCGYC 2 cut(s) 547, 594
BsaJI CCNNGG 2 cut(s) 802, 921
BsaXI ACNNNNNCTCC 2 cut(s) 876, 906
Bsc4I CCNNNNNNNGG 3 cut(s) 346, 626, 809
Bse118I RCCGGY 1 cut(s) 102
BseBI CCWGG 2 cut(s) 431, 804
BseDI CCNNGG 2 cut(s) 802, 921
BseGI GGATG 4 cut(s) 111, 235, 610, 895
BseLI CCNNNNNNNGG 3 cut(s) 346, 626, 809
BseMII CTCAG 1 cut(s) 106
BseRI GAGGAG 8 cut(s) 77, 80, 491, 494, 506, 695, 741, 805
BseXI GCAGC 3 cut(s) 375, 426, 558
Bsh1236I CGCG 2 cut(s) 386, 902
BshFI GGCC 3 cut(s) 127, 404, 561
BshNI GGYRCC 2 cut(s) 546, 616
BsiHKCI CYCGRG 1 cut(s) 290
BsiSI CCGG 5 cut(s) 103, 363, 558, 668, 701
BslFI GGGAC 3 cut(s) 299, 643, 677
BslI CCNNNNNNNGG 3 cut(s) 346, 626, 809
BsmAI GTCTC 2 cut(s) 27, 76
BsmFI GGGAC 3 cut(s) 299, 643, 677
BsmI GAATGC 1 cut(s) 577
BsnI GGCC 3 cut(s) 127, 404, 561
BsoBI CYCGRG 1 cut(s) 290
Bsp119I TTCGAA 1 cut(s) 175
Bsp1286I GDGCHC 1 cut(s) 223
Bsp143I GATC 4 cut(s) 54, 330, 396, 730
Bsp19I CCATGG 1 cut(s) 921
BspACI CCGC 8 cut(s) 79, 223, 384, 446, 524, 575, 650, 902
BspANI GGCC 3 cut(s) 127, 404, 561
BspCNI CTCAG 1 cut(s) 105
BspFNI CGCG 2 cut(s) 386, 902
BspHI TCATGA 1 cut(s) 927
BspLI GGNNCC 7 cut(s) 287, 367, 548, 618, 665, 666, 684
BspMAI CTGCAG 1 cut(s) 393
BspPI GGATC 1 cut(s) 404
BspT104I TTCGAA 1 cut(s) 175
BspT107I GGYRCC 2 cut(s) 546, 616
BsrFI RCCGGY 1 cut(s) 102
BssAI RCCGGY 1 cut(s) 102
BssECI CCNNGG 2 cut(s) 802, 921
BssMI GATC 4 cut(s) 54, 330, 396, 730
BssNI GRCGYC 2 cut(s) 547, 594
BssT1I CCWWGG 1 cut(s) 921
Bst2UI CCWGG 2 cut(s) 431, 804
Bst4CI ACNGT 2 cut(s) 264, 634
Bst6I CTCTTC 1 cut(s) 302
BstACI GRCGYC 2 cut(s) 547, 594
BstAPI GCANNNNNTGC 1 cut(s) 508
BstBAI YACGTR 1 cut(s) 613
BstBI TTCGAA 1 cut(s) 175
BstC8I GCNNGC 4 cut(s) 11, 161, 223, 444
BstDEI CTNAG 1 cut(s) 92
BstDSI CCRYGG 1 cut(s) 921
BstF5I GGATG 4 cut(s) 111, 235, 610, 895
BstFNI CGCG 2 cut(s) 386, 902
BstH2I RGCGCY 1 cut(s) 550
BstHHI GCGC 2 cut(s) 388, 549
BstKTI GATC 4 cut(s) 57, 333, 399, 733
BstMAI GTCTC 2 cut(s) 27, 76
BstMBI GATC 4 cut(s) 54, 330, 396, 730
BstMWI GCNNNNNNNGC 1 cut(s) 508
BstNI CCWGG 2 cut(s) 431, 804
BstSCI CCNGG 4 cut(s) 429, 556, 666, 802
BstSFI CTRYAG 1 cut(s) 389
BstUI CGCG 2 cut(s) 386, 902
BstV1I GCAGC 3 cut(s) 375, 426, 558
BsuI GTATCC 1 cut(s) 429
BsuRI GGCC 3 cut(s) 127, 404, 561
BtgI CCRYGG 1 cut(s) 921
BtgZI GCGATG 1 cut(s) 264
BtsCI GGATG 4 cut(s) 111, 235, 610, 895
BtsI GCAGTG 1 cut(s) 398
BtsIMutI CAGTG 1 cut(s) 398
Cac8I GCNNGC 4 cut(s) 11, 161, 223, 444
CciI TCATGA 1 cut(s) 927
CfoI GCGC 2 cut(s) 388, 549
Cfr10I RCCGGY 1 cut(s) 102
Cfr13I GGNCC 2 cut(s) 286, 664
Csp6I GTAC 2 cut(s) 260, 617
CviAII CATG 5 cut(s) 22, 400, 643, 922, 928
CviQI GTAC 2 cut(s) 260, 617
DdeI CTNAG 1 cut(s) 92
DinI GGCGCC 1 cut(s) 548
DpnI GATC 4 cut(s) 56, 332, 398, 732
DpnII GATC 4 cut(s) 54, 330, 396, 730
DraI TTTAAA 1 cut(s) 519
DraIII CACNNNGTG 1 cut(s) 568
EaeI YGGCCR 2 cut(s) 402, 559
Eam1104I CTCTTC 1 cut(s) 302
EarI CTCTTC 1 cut(s) 302
EciI GGCGGA 1 cut(s) 665
Eco130I CCWWGG 1 cut(s) 921
Eco24I GRGCYC 1 cut(s) 223
Eco47I GGWCC 2 cut(s) 286, 664
Eco57I CTGAAG 1 cut(s) 82
Eco88I CYCGRG 1 cut(s) 290
EcoO109I RGGNCCY 2 cut(s) 286, 664
EcoRII CCWGG 2 cut(s) 429, 802
EcoT14I CCWWGG 1 cut(s) 921
EcoT38I GRGCYC 1 cut(s) 223
EgeI GGCGCC 1 cut(s) 548
EheI GGCGCC 1 cut(s) 548
ErhI CCWWGG 1 cut(s) 921
FaeI CATG 5 cut(s) 25, 403, 646, 925, 931
FaiI YATR 9 cut(s) 23, 258, 401, 644, 656, 689, 746, 923, 929
FaqI GGGAC 3 cut(s) 299, 643, 677
FatI CATG 5 cut(s) 21, 399, 642, 921, 927
FauI CCCGC 1 cut(s) 230
FblI GTMKAC 1 cut(s) 273
Fnu4HI GCNGC 4 cut(s) 389, 440, 572, 575
FokI GGATG 4 cut(s) 98, 242, 617, 902
FriOI GRGCYC 1 cut(s) 223
Fsp4HI GCNGC 4 cut(s) 389, 440, 572, 575
GlaI GCGC 2 cut(s) 387, 548
GluI GCNGC 4 cut(s) 389, 440, 572, 575
GsuI CTGGAG 1 cut(s) 851
HaeII RGCGCY 1 cut(s) 550
HaeIII GGCC 3 cut(s) 127, 404, 561
HapII CCGG 5 cut(s) 103, 363, 558, 668, 701
HhaI GCGC 2 cut(s) 388, 549
Hin1I GRCGYC 2 cut(s) 547, 594
Hin1II CATG 5 cut(s) 25, 403, 646, 925, 931
Hin6I GCGC 2 cut(s) 386, 547
HinP1I GCGC 2 cut(s) 386, 547
HincII GTYRAC 3 cut(s) 241, 274, 895
HindII GTYRAC 3 cut(s) 241, 274, 895
HinfI GANTC 6 cut(s) 84, 154, 177, 214, 451, 934
HpaII CCGG 5 cut(s) 103, 363, 558, 668, 701
HphI GGTGA 4 cut(s) 496, 646, 910, 948
Hpy166II GTNNAC 4 cut(s) 241, 274, 895, 918
Hpy188I TCNGA 3 cut(s) 182, 213, 349
Hpy188III TCNNGA 4 cut(s) 151, 299, 830, 928
Hpy8I GTNNAC 4 cut(s) 241, 274, 895, 918
Hpy99I CGWCG 5 cut(s) 47, 275, 305, 596, 599
HpyAV CCTTC 4 cut(s) 138, 481, 619, 937
HpyCH4III ACNGT 2 cut(s) 264, 634
HpyCH4IV ACGT 3 cut(s) 270, 594, 612
HpyCH4V TGCA 2 cut(s) 391, 502
HpyF10VI GCNNNNNNNGC 1 cut(s) 508
HpyF3I CTNAG 1 cut(s) 92
HpySE526I ACGT 3 cut(s) 270, 594, 612
Hsp92I GRCGYC 2 cut(s) 547, 594
Hsp92II CATG 5 cut(s) 25, 403, 646, 925, 931
HspAI GCGC 2 cut(s) 386, 547
KasI GGCGCC 1 cut(s) 546
KflI GGGWCCC 1 cut(s) 664
KpnI GGTACC 1 cut(s) 620
Kzo9I GATC 4 cut(s) 54, 330, 396, 730
LmnI GCTCC 1 cut(s) 682
Lsp1109I GCAGC 3 cut(s) 375, 426, 558
LweI GCATC 3 cut(s) 220, 498, 762
MaeII ACGT 3 cut(s) 270, 594, 612
MaeIII GTNAC 2 cut(s) 583, 608
MalI GATC 4 cut(s) 56, 332, 398, 732
MboI GATC 4 cut(s) 54, 330, 396, 730
MboII GAAGA 4 cut(s) 80, 206, 319, 517
MhlI GDGCHC 1 cut(s) 223
MlsI TGGCCA 1 cut(s) 404
MluCI AATT 4 cut(s) 118, 637, 847, 860
MluNI TGGCCA 1 cut(s) 404
Mly113I GGCGCC 1 cut(s) 547
MlyI GAGTC 1 cut(s) 78
MmeI TCCRAC 1 cut(s) 513
Mox20I TGGCCA 1 cut(s) 404
MscI TGGCCA 1 cut(s) 404
MseI TTAA 4 cut(s) 518, 542, 696, 765
MslI CAYNNNNRTG 1 cut(s) 926
Msp20I TGGCCA 1 cut(s) 404
MspA1I CMGCKG 1 cut(s) 79
MspI CCGG 5 cut(s) 103, 363, 558, 668, 701
MspR9I CCNGG 4 cut(s) 431, 558, 668, 804
Mva1269I GAATGC 1 cut(s) 577
MvaI CCWGG 2 cut(s) 431, 804
MvnI CGCG 2 cut(s) 386, 902
MwoI GCNNNNNNNGC 1 cut(s) 508
NarI GGCGCC 1 cut(s) 547
NciI CCSGG 2 cut(s) 558, 668
NcoI CCATGG 1 cut(s) 921
NdeII GATC 4 cut(s) 54, 330, 396, 730
NlaIII CATG 5 cut(s) 25, 403, 646, 925, 931
NlaIV GGNNCC 7 cut(s) 287, 367, 548, 618, 665, 666, 684
NmuCI GTSAC 1 cut(s) 583
NspV TTCGAA 1 cut(s) 175
PaeR7I CTCGAG 1 cut(s) 290
PagI TCATGA 1 cut(s) 927
PcsI WCGNNNNNNNCGW 1 cut(s) 297
PctI GAATGC 1 cut(s) 577
PfeI GAWTC 5 cut(s) 154, 177, 214, 451, 934
PflFI GACNNNGTC 1 cut(s) 596
PfoI TCCNGGA 1 cut(s) 429
PkrI GCNGC 4 cut(s) 390, 441, 573, 576
PleI GAGTC 1 cut(s) 78
PluTI GGCGCC 1 cut(s) 550
PpsI GAGTC 1 cut(s) 78
Ppu21I YACGTR 1 cut(s) 613
PpuMI RGGWCCY 2 cut(s) 286, 664
Psp5II RGGWCCY 2 cut(s) 286, 664
Psp6I CCWGG 2 cut(s) 429, 802
PspGI CCWGG 2 cut(s) 429, 802
PspN4I GGNNCC 7 cut(s) 287, 367, 548, 618, 665, 666, 684
PspPI GGNCC 2 cut(s) 286, 664
PspPPI RGGWCCY 2 cut(s) 286, 664
PspXI VCTCGAGB 1 cut(s) 290
PsrI GAACNNNNNNTAC 2 cut(s) 358, 390
PstI CTGCAG 1 cut(s) 393
PsyI GACNNNGTC 1 cut(s) 596
RsaI GTAC 2 cut(s) 261, 618
RsaNI GTAC 2 cut(s) 260, 617
RseI CAYNNNNRTG 1 cut(s) 926
SalI GTCGAC 1 cut(s) 272
SaqAI TTAA 4 cut(s) 518, 542, 696, 765
SatI GCNGC 4 cut(s) 389, 440, 572, 575
Sau3AI GATC 4 cut(s) 54, 330, 396, 730
Sau96I GGNCC 2 cut(s) 286, 664
SchI GAGTC 1 cut(s) 78
ScrFI CCNGG 4 cut(s) 431, 558, 668, 804
SduI GDGCHC 1 cut(s) 223
SfaNI GCATC 3 cut(s) 220, 498, 762
SfcI CTRYAG 1 cut(s) 389
SfoI GGCGCC 1 cut(s) 548
Sfr274I CTCGAG 1 cut(s) 290
SfuI TTCGAA 1 cut(s) 175
SinI GGWCC 2 cut(s) 286, 664
SlaI CTCGAG 1 cut(s) 290
SmiMI CAYNNNNRTG 1 cut(s) 926
SmlI CTYRAG 2 cut(s) 149, 290
SmoI CTYRAG 2 cut(s) 149, 290
Sse9I AATT 4 cut(s) 118, 637, 847, 860
SsiI CCGC 8 cut(s) 79, 223, 384, 446, 524, 575, 650, 902
SspDI GGCGCC 1 cut(s) 546
SspI AATATT 1 cut(s) 409
StyD4I CCNGG 4 cut(s) 429, 556, 666, 802
StyI CCWWGG 1 cut(s) 921
TaaI ACNGT 2 cut(s) 264, 634
TaiI ACGT 3 cut(s) 273, 597, 615
TaqI TCGA 7 cut(s) 42, 66, 175, 217, 273, 291, 864
TasI AATT 4 cut(s) 118, 637, 847, 860
TatI WGTACW 1 cut(s) 259
TauI GCSGC 1 cut(s) 577
TfiI GAWTC 5 cut(s) 154, 177, 214, 451, 934
Tru1I TTAA 4 cut(s) 518, 542, 696, 765
Tru9I TTAA 4 cut(s) 518, 542, 696, 765
TscAI CASTG 1 cut(s) 398
TseFI GTSAC 1 cut(s) 583
TseI GCWGC 3 cut(s) 388, 439, 571
Tsp45I GTSAC 1 cut(s) 583
TspDTI ATGAA 3 cut(s) 120, 631, 815
TspGWI ACGGA 2 cut(s) 335, 571
TspRI CASTG 1 cut(s) 398
Tth111I GACNNNGTC 1 cut(s) 596
VpaK11BI GGWCC 2 cut(s) 286, 664
XapI RAATTY 3 cut(s) 637, 847, 860
XhoI CTCGAG 1 cut(s) 290
XmiI GTMKAC 1 cut(s) 273
ZraI GACGTC 1 cut(s) 595
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.