Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0000853

Physical Location & Seq

Genomic Coordinates Forward (+)

29939383 .. 29943706

Gene Structure 4324 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1203700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGAAACCTGGTTCCTGATCTTCATCGCCTTCTGCGTCTCCTTCCTCCTCAAACCCCTTCTTTCCCTATTCCTACCCACTTCCATCTCCAAACCCAAGCTCCCTCCCGGGCCCCGCGTCTTCCCCGTCATCGGCGGCTTCTTATTCCTCCTCGAATCCTTCTTGGAGCTCGAGCCTATCATCCGCAAACTCAAGGCCAAATACGGGCCCATCATCTCCCTCCGCCTCGGCTCCCGCCCCTCCGTCTTCATCGCCGACCGCTCCCTCGCCCACCAGGCCTTAATCCAGAACGGCGCCGTGTTTGCCGACCGCCCCCTGGCCTTGGCCACCAACAAGTACGTCACCAGCAACCAGCACAACATCAGCTCCGCCATCTACGGCCCCACTTGGCGCCTCCTCCGCCGCAACCTCACCTCCGAAATCCTTCACCCTTCCCGCATCAAATCCTACGGAAACGCCCGCAAATGGGTTCTCGATATCCTCGTCAACCGCCTCAAAACCGAGTCTCAATCCCACTCCGAAGGCGGCGCCGTCGTCAGGGTGGTCGACCACTTCCAATACGCCATGTTCTGCCTCCTGGTCTTGATGTGCTTCGGCGACAAATTGAACGAAGAGCAAATCAAAGAAATCGAGCATGTGCATCGCCAACTACTTTTGAGTTCCAGGCGGTTCAATATCCTCAATTTCAAGCCGAAATTGACGAAGATTATCTTCAAAAATCGGTGGCGGCAATTCTTCAAAATCCTCGAGGAACGACGAGAAGTGCTCGTCCCTCTGATTCGAGCACGACAAAACAGGGCAAAGCAGGGCAGCAAAACCGACGACAAAGACGATGAATTTGTGTTGTCGTATACTGATACGCTGCTGGACCTCGAACTTCCCGACGGCAACGAAAAGCGGAAGCTTTCGGAGGGAGAAATGGTCAGCCTCTGCTCAGAGTTTCTGAACGGCGGCACCGACACGACTTCCACCGCGCTGCAGTGGATCATGGCCAACGTAGTGAAGTACCCGCAAGTTCAGGAGAAGCTGTTTGCGGAGATTAAAGGGGTGATGGGAGAAACGGAGGAGGAGGTGCGGGAGGAGGTCCTGCACAAGCTGCCGTATCTGAAAGCCGTGATCTTGGAGGGGCTGAGGCGCCACCCGCCGGGGCACTTTGTGCTGCCGCACGCTGTGACGCATGACGTGGTTTTGGGCGGACACGTTGTGCCCAAGAACGGGACCGTTAATTTCATGGTGGCGGATATAGGGTGGGACCCGCAAGTGTGGGAAGATCCCATGGCGTTCAAGCCGGAGAGGTTCTTGGGCAGCGGCGGAGGAGAAGAAGGGTTCGATTTGACGGGGAGCAGGGAGATTAAGATGATGCCGTTTGGGGCAGGGAGGAGGATCTGTCCTGCATCGGGATTGGCGGTGCTTCACCTGGAGTACTTTGTGGCGAATTTGGTTTGGAAGTTTCAGTGGAGGGCTGTGGAGGGAGATGACGTTGACCTGTCAGAGAAGACGGAGTTTACTGTGGTGATGAAGAATCCATTGCAAGCCCACGTTGAATTTGTTGGTGGGGCGCTGAGATGCGGTGAATATGTGACATTACGCAAAGTTGGGGATGCAAGCCATAAGGGTGGTGGTTCCGGCACCCAACAAATTGTGATCAAAGGCCCCTTATGCAAGGATTATTACAAGATTCGGGAGTATCTCTACTCACAATTTTATTTGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00830 ko00980 ko01100 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00830 map00980 map01100 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

572

Amino Acids

64.83

Weight (kDa)

8.98

Isoelectric Point (pI)

38.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	35 - 509	2.1e-90	Cytochrome P450
CPSF100_C	PF13299	511 - 568	2.4e-06	Cleavage and polyadenylation factor 2 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000853)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64900 AT1G64930 AT1G64940 AT1G64950 AT2G12190 AT5G61320
fragaria_vesca	FvH4_3g26910 FvH4_4g17150 FvH4_5g25581 FvH4_5g25581 FvH4_5g25581 FvH4_7g21810 FvH4_7g29661 FvH4_7g29661 FvH4_7g29700 FvH4_7g29720 FvH4_7g29721 FvH4_7g29740
malus_domestica	MD01G1203700.v1.1 MD01G1203800.v1.1 MD01G1203900.v1.1 MD01G1204000.v1.1 MD01G1204300.v1.1 MD01G1204400.v1.1 MD01G1204500.v1.1 MD07G1273000.v1.1
prunus_persica	Prupe.2G296300_v2.0.a1 Prupe.2G296500_v2.0.a1 Prupe.2G296600_v2.0.a1
pyrus_communis	pycom01g21300 pycom01g21310 pycom01g21350 pycom01g21400 pycom07g24940
rosa_chinensis	RchiOBHm_Chr1g0377691 RchiOBHm_Chr1g0377701 RchiOBHm_Chr7g0221601
rosa_laevigata	RLG00000002153 RLG00000026503 RLG00000026505
rosa_multiflora	Rmu_sc0002832.1_g000018 Rmu_sc0002832.1_g000019 Rmu_sc0005704.1_g000011 Rmu_sc0038902.1_g000002
rosa_roxburghii	Rroxscaffold_3G00238260 Rroxscaffold_4G00281110 Rroxscaffold_4G00281120
rosa_rugosa	Rorug01G0404400 Rorug01G0404500
rosa_samantha	Rh1AG428000 Rh1AG428100 Rh1AG428200 Rh1BG381100 Rh1BG381200 Rh1BG381300 Rh1CG000400 Rh1CG395100 Rh1CG395200 Rh1DG412100 Rh1DG412200 Rh1DG412300 Rh3DG181100 Rh7BG332800 Rh7DG340900
rosa_wichuraiana	Rw1G004050 Rw1G037050 Rw1G037070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	746
AccB1I	GGYRCC	6 cut(s)	293, 390, 527, 953, 1134, 1628
AccBSI	CCGCTC	1 cut(s)	261
AccI	GTMKAC	2 cut(s)	546, 851
AccII	CGCG	2 cut(s)	117, 974
AclWI	GGATC	3 cut(s)	992, 1265, 1391
AcoI	YGGCCR	2 cut(s)	324, 990
AcsI	RAATTY	3 cut(s)	836, 1435, 1544
AcyI	GRCGYC	4 cut(s)	294, 391, 528, 1135
AdeI	CACNNNGTG	3 cut(s)	1156, 1171, 1204
AfaI	GTAC	3 cut(s)	338, 1007, 1424
AflIII	ACRYGT	1 cut(s)	1198
AgsI	TTSAA	7 cut(s)	607, 673, 688, 715, 739, 1285, 1544
AjiI	CACGTC	1 cut(s)	1183
AjnI	CCWGG	6 cut(s)	8, 273, 315, 576, 662, 1416
AloI	GAACNNNNNNTCC	1 cut(s)	28
AluBI	AGCT	6 cut(s)	100, 169, 366, 904, 1027, 1096
AluI	AGCT	6 cut(s)	100, 169, 366, 904, 1027, 1096
Alw21I	GWGCWC	3 cut(s)	171, 768, 787
Alw26I	GTCTC	2 cut(s)	43, 510
AlwI	GGATC	3 cut(s)	992, 1265, 1391
AlwNI	CAGNNNCTG	1 cut(s)	930
Ama87I	CYCGRG	3 cut(s)	107, 170, 746
AoxI	GGCC	9 cut(s)	110, 195, 206, 276, 318, 324, 379, 990, 1651
ApaI	GGGCCC	2 cut(s)	114, 210
ApeKI	GCWGC	6 cut(s)	810, 862, 976, 1096, 1159, 1305
ApoI	RAATTY	3 cut(s)	836, 1435, 1544
ArsI	GACNNNNNNTTYG	2 cut(s)	821, 853
Asp700I	GAANNNNTTC	1 cut(s)	423
AspLEI	GCGC	6 cut(s)	296, 393, 530, 976, 1137, 1561
AsuC2I	CCSGG	3 cut(s)	108, 109, 1146
AsuHPI	GGTGA	7 cut(s)	334, 403, 419, 1060, 1406, 1525, 1583
AvaI	CYCGRG	3 cut(s)	107, 170, 746
AvaII	GGWCC	4 cut(s)	868, 1084, 1218, 1252
BaeGI	GKGCMC	4 cut(s)	114, 210, 1152, 1209
BalI	TGGCCA	2 cut(s)	326, 992
BanI	GGYRCC	6 cut(s)	293, 390, 527, 953, 1134, 1628
BanII	GRGCYC	3 cut(s)	114, 171, 210
BbsI	GAAGAC	3 cut(s)	112, 238, 1502
Bbv12I	GWGCWC	3 cut(s)	171, 768, 787
BbvCI	CCTCAGC	1 cut(s)	1130
BbvI	GCAGC	6 cut(s)	822, 849, 963, 1083, 1146, 1317
BccI	CCATC	4 cut(s)	92, 218, 380, 1045
BceAI	ACGGC	9 cut(s)	281, 307, 394, 515, 901, 964, 1084, 1097, 1348
BcgI	CGANNNNNNTGC	2 cut(s)	623, 657
BciT130I	CCWGG	6 cut(s)	10, 275, 317, 578, 664, 1418
BclI	TGATCA	1 cut(s)	1644
BcnI	CCSGG	3 cut(s)	108, 109, 1146
BcoDI	GTCTC	2 cut(s)	43, 510
BfmI	CTRYAG	1 cut(s)	977
BfoI	RGCGCY	5 cut(s)	297, 394, 531, 1138, 1562
BglI	GCCNNNNNGGC	1 cut(s)	275
BmcAI	AGTACT	1 cut(s)	1424
Bme1390I	CCNGG	9 cut(s)	10, 108, 109, 275, 317, 578, 664, 1146, 1418
Bme18I	GGWCC	4 cut(s)	868, 1084, 1218, 1252
BmeT110I	CYCGRG	3 cut(s)	107, 170, 746
BmgBI	CACGTC	1 cut(s)	1183
BmrFI	CCNGG	9 cut(s)	10, 108, 109, 275, 317, 578, 664, 1146, 1418
BmsI	GCATC	6 cut(s)	447, 649, 1350, 1403, 1556, 1591
BpiI	GAAGAC	3 cut(s)	112, 238, 1502
BplI	GAGNNNNNCTC	2 cut(s)	750, 782
BpmI	CTGGAG	1 cut(s)	1439
Bpu10I	CCTNAGC	1 cut(s)	1130
BpuEI	CTTGAG	1 cut(s)	176
BpuMI	CCSGG	3 cut(s)	108, 109, 1146
BsaBI	GATNNNNATC	1 cut(s)	23
BsaHI	GRCGYC	4 cut(s)	294, 391, 528, 1135
BsaJI	CCNNGG	6 cut(s)	107, 226, 315, 321, 1145, 1275
Bse3DI	GCAATG	1 cut(s)	1526
Bse8I	GATNNNNATC	1 cut(s)	23
BseBI	CCWGG	6 cut(s)	10, 275, 317, 578, 664, 1418
BseDI	CCNNGG	6 cut(s)	107, 226, 315, 321, 1145, 1275
BseGI	GGATG	2 cut(s)	180, 1606
BseJI	GATNNNNATC	1 cut(s)	23
BseMI	GCAATG	1 cut(s)	1526
BseMII	CTCAG	3 cut(s)	948, 1121, 1553
BseRI	GAGGAG	8 cut(s)	38, 140, 386, 1079, 1082, 1094, 1329, 1393
BseSI	GKGCMC	4 cut(s)	114, 210, 1152, 1209
BseXI	GCAGC	6 cut(s)	822, 849, 963, 1083, 1146, 1317
BsgI	GTGCAG	1 cut(s)	1073
Bsh1236I	CGCG	2 cut(s)	117, 974
Bsh1285I	CGRYCG	2 cut(s)	259, 310
BshFI	GGCC	9 cut(s)	112, 197, 208, 278, 320, 326, 381, 992, 1653
BshNI	GGYRCC	6 cut(s)	293, 390, 527, 953, 1134, 1628
BsiEI	CGRYCG	2 cut(s)	259, 310
BsiHKAI	GWGCWC	3 cut(s)	171, 768, 787
BsiHKCI	CYCGRG	3 cut(s)	107, 170, 746
BsiSI	CCGG	4 cut(s)	108, 1145, 1289, 1626
BslFI	GGGAC	3 cut(s)	755, 1231, 1265
BsmAI	GTCTC	2 cut(s)	43, 510
BsmBI	CGTCTC	1 cut(s)	43
BsmFI	GGGAC	3 cut(s)	755, 1231, 1265
BsnI	GGCC	9 cut(s)	112, 197, 208, 278, 320, 326, 381, 992, 1653
BsoBI	CYCGRG	3 cut(s)	107, 170, 746
Bsp120I	GGGCCC	2 cut(s)	110, 206
Bsp1286I	GDGCHC	7 cut(s)	114, 171, 210, 768, 787, 1152, 1209
Bsp143I	GATC	6 cut(s)	18, 984, 1116, 1270, 1383, 1644
Bsp19I	CCATGG	1 cut(s)	1275
BspANI	GGCC	9 cut(s)	112, 197, 208, 278, 320, 326, 381, 992, 1653
BspCNI	CTCAG	3 cut(s)	947, 1122, 1554
BspFNI	CGCG	2 cut(s)	117, 974
BspMAI	CTGCAG	1 cut(s)	981
BspPI	GGATC	3 cut(s)	992, 1265, 1391
BspQI	GCTCTTC	1 cut(s)	606
BspT107I	GGYRCC	6 cut(s)	293, 390, 527, 953, 1134, 1628
BsrBI	CCGCTC	1 cut(s)	261
BsrDI	GCAATG	1 cut(s)	1526
BssECI	CCNNGG	6 cut(s)	107, 226, 315, 321, 1145, 1275
BssMI	GATC	6 cut(s)	18, 984, 1116, 1270, 1383, 1644
BssNAI	GTATAC	1 cut(s)	852
BssNI	GRCGYC	4 cut(s)	294, 391, 528, 1135
BssT1I	CCWWGG	2 cut(s)	321, 1275
Bst1107I	GTATAC	1 cut(s)	852
Bst2UI	CCWGG	6 cut(s)	10, 275, 317, 578, 664, 1418
Bst4CI	ACNGT	2 cut(s)	1222, 1510
Bst6I	CTCTTC	1 cut(s)	606
BstACI	GRCGYC	4 cut(s)	294, 391, 528, 1135
BstAPI	GCANNNNNTGC	2 cut(s)	1096, 1156
BstC8I	GCNNGC	4 cut(s)	460, 1167, 1533, 1606
BstDEI	CTNAG	3 cut(s)	934, 1130, 1562
BstDSI	CCRYGG	1 cut(s)	1275
BstF5I	GGATG	2 cut(s)	180, 1606
BstFNI	CGCG	2 cut(s)	117, 974
BstH2I	RGCGCY	5 cut(s)	297, 394, 531, 1138, 1562
BstHHI	GCGC	6 cut(s)	296, 393, 530, 976, 1137, 1561
BstKTI	GATC	6 cut(s)	21, 987, 1119, 1273, 1386, 1647
BstMAI	GTCTC	2 cut(s)	43, 510
BstMBI	GATC	6 cut(s)	18, 984, 1116, 1270, 1383, 1644
BstMCI	CGRYCG	2 cut(s)	259, 310
BstMWI	GCNNNNNNNGC	7 cut(s)	275, 302, 399, 1096, 1141, 1156, 1659
BstNI	CCWGG	6 cut(s)	10, 275, 317, 578, 664, 1418
BstNSI	RCATGY	1 cut(s)	638
BstSCI	CCNGG	9 cut(s)	8, 106, 107, 273, 315, 576, 662, 1144, 1416
BstSFI	CTRYAG	1 cut(s)	977
BstSLI	GKGCMC	4 cut(s)	114, 210, 1152, 1209
BstUI	CGCG	2 cut(s)	117, 974
BstV1I	GCAGC	6 cut(s)	822, 849, 963, 1083, 1146, 1317
BstV2I	GAAGAC	3 cut(s)	112, 238, 1502
BstX2I	RGATCY	2 cut(s)	1270, 1383
BstXI	CCANNNNNNTGG	1 cut(s)	1616
BstYI	RGATCY	2 cut(s)	1270, 1383
BstZ17I	GTATAC	1 cut(s)	852
BsuRI	GGCC	9 cut(s)	112, 197, 208, 278, 320, 326, 381, 992, 1653
BtgI	CCRYGG	1 cut(s)	1275
BtgZI	GCGATG	3 cut(s)	10, 235, 626
BtrI	CACGTC	1 cut(s)	1183
BtsCI	GGATG	2 cut(s)	180, 1606
BtsI	GCAGTG	1 cut(s)	986
BtsIMutI	CAGTG	2 cut(s)	986, 1460
Cac8I	GCNNGC	4 cut(s)	460, 1167, 1533, 1606
CaiI	CAGNNNCTG	1 cut(s)	930
CfoI	GCGC	6 cut(s)	296, 393, 530, 976, 1137, 1561
Cfr9I	CCCGGG	1 cut(s)	107
CseI	GACGC	3 cut(s)	25, 106, 1183
CsiI	ACCWGGT	1 cut(s)	8
Csp6I	GTAC	3 cut(s)	337, 1006, 1423
CviAII	CATG	6 cut(s)	565, 635, 988, 1178, 1231, 1276
CviQI	GTAC	3 cut(s)	337, 1006, 1423
DdeI	CTNAG	3 cut(s)	934, 1130, 1562
DinI	GGCGCC	4 cut(s)	295, 392, 529, 1136
DpnI	GATC	6 cut(s)	20, 986, 1118, 1272, 1385, 1646
DpnII	GATC	6 cut(s)	18, 984, 1116, 1270, 1383, 1644
DraIII	CACNNNGTG	3 cut(s)	1156, 1171, 1204
EaeI	YGGCCR	2 cut(s)	324, 990
Eam1104I	CTCTTC	1 cut(s)	606
EarI	CTCTTC	1 cut(s)	606
EciI	GGCGGA	6 cut(s)	212, 358, 389, 1209, 1253, 1326
Ecl136II	GAGCTC	1 cut(s)	169
Eco130I	CCWWGG	2 cut(s)	321, 1275
Eco147I	AGGCCT	1 cut(s)	278
Eco24I	GRGCYC	3 cut(s)	114, 171, 210
Eco32I	GATATC	1 cut(s)	478
Eco47I	GGWCC	4 cut(s)	868, 1084, 1218, 1252
Eco53kI	GAGCTC	1 cut(s)	169
Eco88I	CYCGRG	3 cut(s)	107, 170, 746
EcoICRI	GAGCTC	1 cut(s)	169
EcoO109I	RGGNCCY	4 cut(s)	111, 1084, 1252, 1652
EcoRII	CCWGG	6 cut(s)	8, 273, 315, 576, 662, 1416
EcoRV	GATATC	1 cut(s)	478
EcoT14I	CCWWGG	2 cut(s)	321, 1275
EcoT38I	GRGCYC	3 cut(s)	114, 171, 210
EgeI	GGCGCC	4 cut(s)	295, 392, 529, 1136
EheI	GGCGCC	4 cut(s)	295, 392, 529, 1136
ErhI	CCWWGG	2 cut(s)	321, 1275
Esp3I	CGTCTC	1 cut(s)	43
FaeI	CATG	6 cut(s)	568, 638, 991, 1181, 1234, 1279
FalI	AAGNNNNNCTT	2 cut(s)	695, 727
FaqI	GGGAC	3 cut(s)	755, 1231, 1265
FatI	CATG	6 cut(s)	564, 634, 987, 1177, 1230, 1275
FauI	CCCGC	8 cut(s)	122, 242, 443, 467, 1017, 1068, 1149, 1263
FbaI	TGATCA	1 cut(s)	1644
FblI	GTMKAC	2 cut(s)	546, 851
FokI	GGATG	2 cut(s)	167, 1613
FriOI	GRGCYC	3 cut(s)	114, 171, 210
GlaI	GCGC	6 cut(s)	295, 392, 529, 975, 1136, 1560
GsuI	CTGGAG	1 cut(s)	1439
HaeII	RGCGCY	5 cut(s)	297, 394, 531, 1138, 1562
HaeIII	GGCC	9 cut(s)	112, 197, 208, 278, 320, 326, 381, 992, 1653
HapII	CCGG	4 cut(s)	108, 1145, 1289, 1626
HgaI	GACGC	3 cut(s)	25, 106, 1183
HhaI	GCGC	6 cut(s)	296, 393, 530, 976, 1137, 1561
Hin1I	GRCGYC	4 cut(s)	294, 391, 528, 1135
Hin1II	CATG	6 cut(s)	568, 638, 991, 1181, 1234, 1279
Hin6I	GCGC	6 cut(s)	294, 391, 528, 974, 1135, 1559
HinP1I	GCGC	6 cut(s)	294, 391, 528, 974, 1135, 1559
HincII	GTYRAC	3 cut(s)	487, 547, 1483
HindII	GTYRAC	3 cut(s)	487, 547, 1483
HindIII	AAGCTT	1 cut(s)	902
HinfI	GANTC	5 cut(s)	155, 503, 778, 1522, 1678
HpaII	CCGG	4 cut(s)	108, 1145, 1289, 1626
HphI	GGTGA	7 cut(s)	334, 403, 419, 1060, 1406, 1525, 1583
Hpy166II	GTNNAC	5 cut(s)	487, 547, 852, 1483, 1506
Hpy188I	TCNGA	8 cut(s)	418, 520, 777, 910, 937, 945, 1107, 1492
Hpy188III	TCNNGA	8 cut(s)	16, 286, 473, 583, 881, 1019, 1398, 1682
Hpy8I	GTNNAC	5 cut(s)	487, 547, 852, 1483, 1506
Hpy99I	CGWCG	4 cut(s)	536, 759, 824, 887
HpyAV	CCTTC	8 cut(s)	40, 52, 68, 169, 434, 441, 515, 1316
HpyCH4III	ACNGT	2 cut(s)	1222, 1510
HpyCH4IV	ACGT	6 cut(s)	339, 996, 1182, 1200, 1479, 1539
HpyCH4V	TGCA	7 cut(s)	640, 979, 1090, 1394, 1531, 1604, 1662
HpyF10VI	GCNNNNNNNGC	7 cut(s)	275, 302, 399, 1096, 1141, 1156, 1659
HpyF3I	CTNAG	3 cut(s)	934, 1130, 1562
HpySE526I	ACGT	6 cut(s)	339, 996, 1182, 1200, 1479, 1539
Hsp92I	GRCGYC	4 cut(s)	294, 391, 528, 1135
Hsp92II	CATG	6 cut(s)	568, 638, 991, 1181, 1234, 1279
HspAI	GCGC	6 cut(s)	294, 391, 528, 974, 1135, 1559
KasI	GGCGCC	4 cut(s)	293, 390, 527, 1134
KflI	GGGWCCC	1 cut(s)	1252
Ksp22I	TGATCA	1 cut(s)	1644
Kzo9I	GATC	6 cut(s)	18, 984, 1116, 1270, 1383, 1644
LguI	GCTCTTC	1 cut(s)	606
LmnI	GCTCC	6 cut(s)	105, 166, 236, 266, 371, 1341
Lsp1109I	GCAGC	6 cut(s)	822, 849, 963, 1083, 1146, 1317
LweI	GCATC	6 cut(s)	447, 649, 1350, 1403, 1556, 1591
MabI	ACCWGGT	1 cut(s)	8
MaeII	ACGT	6 cut(s)	339, 996, 1182, 1200, 1479, 1539
MaeIII	GTNAC	3 cut(s)	340, 1171, 1579
MalI	GATC	6 cut(s)	20, 986, 1118, 1272, 1385, 1646
MbiI	CCGCTC	1 cut(s)	261
MboI	GATC	6 cut(s)	18, 984, 1116, 1270, 1383, 1644
MflI	RGATCY	2 cut(s)	1270, 1383
MhlI	GDGCHC	7 cut(s)	114, 171, 210, 768, 787, 1152, 1209
MlsI	TGGCCA	2 cut(s)	326, 992
MluNI	TGGCCA	2 cut(s)	326, 992
Mly113I	GGCGCC	4 cut(s)	294, 391, 528, 1135
MlyI	GAGTC	1 cut(s)	512
Mox20I	TGGCCA	2 cut(s)	326, 992
MroXI	GAANNNNTTC	1 cut(s)	423
MscI	TGGCCA	2 cut(s)	326, 992
MseI	TTAA	4 cut(s)	281, 1041, 1224, 1353
MslI	CAYNNNNRTG	1 cut(s)	1614
Msp20I	TGGCCA	2 cut(s)	326, 992
MspA1I	CMGCKG	1 cut(s)	1308
MspI	CCGG	4 cut(s)	108, 1145, 1289, 1626
MspR9I	CCNGG	9 cut(s)	10, 108, 109, 275, 317, 578, 664, 1146, 1418
MvaI	CCWGG	6 cut(s)	10, 275, 317, 578, 664, 1418
MvnI	CGCG	2 cut(s)	117, 974
MwoI	GCNNNNNNNGC	7 cut(s)	275, 302, 399, 1096, 1141, 1156, 1659
NarI	GGCGCC	4 cut(s)	294, 391, 528, 1135
NciI	CCSGG	3 cut(s)	108, 109, 1146
NcoI	CCATGG	1 cut(s)	1275
NdeII	GATC	6 cut(s)	18, 984, 1116, 1270, 1383, 1644
NlaIII	CATG	6 cut(s)	568, 638, 991, 1181, 1234, 1279
NmeAIII	GCCGAG	1 cut(s)	207
NmuCI	GTSAC	3 cut(s)	340, 1171, 1579
NspI	RCATGY	1 cut(s)	638
PaeR7I	CTCGAG	2 cut(s)	170, 746
PceI	AGGCCT	1 cut(s)	278
PciSI	GCTCTTC	1 cut(s)	606
PcsI	WCGNNNNNNNCGW	5 cut(s)	33, 480, 828, 879, 954
PdmI	GAANNNNTTC	1 cut(s)	423
PfeI	GAWTC	4 cut(s)	155, 778, 1522, 1678
PleI	GAGTC	1 cut(s)	511
PluTI	GGCGCC	4 cut(s)	297, 394, 531, 1138
PpsI	GAGTC	1 cut(s)	511
PpuMI	RGGWCCY	2 cut(s)	1084, 1252
Psp124BI	GAGCTC	1 cut(s)	171
Psp5II	RGGWCCY	2 cut(s)	1084, 1252
Psp6I	CCWGG	6 cut(s)	8, 273, 315, 576, 662, 1416
PspGI	CCWGG	6 cut(s)	8, 273, 315, 576, 662, 1416
PspOMI	GGGCCC	2 cut(s)	110, 206
PspPPI	RGGWCCY	2 cut(s)	1084, 1252
PspXI	VCTCGAGB	2 cut(s)	170, 746
PstI	CTGCAG	1 cut(s)	981
PstNI	CAGNNNCTG	1 cut(s)	930
PsuI	RGATCY	2 cut(s)	1270, 1383
RsaI	GTAC	3 cut(s)	338, 1007, 1424
RsaNI	GTAC	3 cut(s)	337, 1006, 1423
RseI	CAYNNNNRTG	1 cut(s)	1614
SacI	GAGCTC	1 cut(s)	171
SalI	GTCGAC	1 cut(s)	545
SapI	GCTCTTC	1 cut(s)	606
SaqAI	TTAA	4 cut(s)	281, 1041, 1224, 1353
Sau3AI	GATC	6 cut(s)	18, 984, 1116, 1270, 1383, 1644
ScaI	AGTACT	1 cut(s)	1424
SchI	GAGTC	1 cut(s)	512
ScrFI	CCNGG	9 cut(s)	10, 108, 109, 275, 317, 578, 664, 1146, 1418
SduI	GDGCHC	7 cut(s)	114, 171, 210, 768, 787, 1152, 1209
SexAI	ACCWGGT	1 cut(s)	8
SfaNI	GCATC	6 cut(s)	447, 649, 1350, 1403, 1556, 1591
SfcI	CTRYAG	1 cut(s)	977
SfoI	GGCGCC	4 cut(s)	295, 392, 529, 1136
Sfr274I	CTCGAG	2 cut(s)	170, 746
SinI	GGWCC	4 cut(s)	868, 1084, 1218, 1252
SlaI	CTCGAG	2 cut(s)	170, 746
SmaI	CCCGGG	1 cut(s)	109
SmiMI	CAYNNNNRTG	1 cut(s)	1614
SmlI	CTYRAG	3 cut(s)	170, 191, 746
SmoI	CTYRAG	3 cut(s)	170, 191, 746
SseBI	AGGCCT	1 cut(s)	278
SspDI	GGCGCC	4 cut(s)	293, 390, 527, 1134
SstI	GAGCTC	1 cut(s)	171
StuI	AGGCCT	1 cut(s)	278
StyD4I	CCNGG	9 cut(s)	8, 106, 107, 273, 315, 576, 662, 1144, 1416
StyI	CCWWGG	2 cut(s)	321, 1275
TaaI	ACNGT	2 cut(s)	1222, 1510
TaiI	ACGT	6 cut(s)	342, 999, 1185, 1203, 1482, 1542
TaqI	TCGA	9 cut(s)	153, 171, 474, 546, 630, 747, 781, 873, 1329
TatI	WGTACW	1 cut(s)	1422
TauI	GCSGC	7 cut(s)	138, 405, 528, 730, 954, 1165, 1311
TfiI	GAWTC	4 cut(s)	155, 778, 1522, 1678
Tru1I	TTAA	4 cut(s)	281, 1041, 1224, 1353
Tru9I	TTAA	4 cut(s)	281, 1041, 1224, 1353
TscAI	CASTG	2 cut(s)	986, 1460
TseFI	GTSAC	3 cut(s)	340, 1171, 1579
TseI	GCWGC	6 cut(s)	810, 862, 976, 1096, 1159, 1305
Tsp45I	GTSAC	3 cut(s)	340, 1171, 1579
TspDTI	ATGAA	5 cut(s)	13, 238, 849, 1219, 1532
TspGWI	ACGGA	4 cut(s)	232, 465, 1076, 1514
TspMI	CCCGGG	1 cut(s)	107
TspRI	CASTG	2 cut(s)	986, 1460
VpaK11BI	GGWCC	4 cut(s)	868, 1084, 1218, 1252
XapI	RAATTY	3 cut(s)	836, 1435, 1544
XceI	RCATGY	1 cut(s)	638
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1616
XhoI	CTCGAG	2 cut(s)	170, 746
XmaI	CCCGGG	1 cut(s)	107
XmiI	GTMKAC	2 cut(s)	546, 851
XmnI	GAANNNNTTC	1 cut(s)	423
ZrmI	AGTACT	1 cut(s)	1424

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.