MD03G1038700.v1.1

Type I inositol 1,4,5-trisphosphate 5-phosphatase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
3081902 .. 3082590
689 bp
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UTR
Exon/CDS
Intron
MD03G1038700.v1.1.491

Sequence Viewer

Length: 126 bp
ATGACTGTCAGCAATCAAGATGTGAAAAAGAAGTCTTTTATTCATAAAATCTTCACCACAAAGGAGAAAGAAGGAAGCGGCTCTTCGGATTTCTCAGGTGAGTCTCTAATGGTTGACTGCAACTGA

Protein Analysis

42

Amino Acids

4.54

Weight (kDa)

6.53

Isoelectric Point (pI)

19.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 78
Alw26I GTCTC 1 cut(s) 108
AsuHPI GGTGA 2 cut(s) 46, 110
BcoDI GTCTC 1 cut(s) 108
BisI GCNGC 1 cut(s) 79
BlsI GCNGC 1 cut(s) 80
BseMII CTCAG 1 cut(s) 108
BsmAI GTCTC 1 cut(s) 108
BspACI CCGC 1 cut(s) 78
BspCNI CTCAG 1 cut(s) 107
BspQI GCTCTTC 1 cut(s) 88
Bst4CI ACNGT 1 cut(s) 7
Bst6I CTCTTC 1 cut(s) 88
BstDEI CTNAG 1 cut(s) 94
BstMAI GTCTC 1 cut(s) 108
CviJI RGCY 1 cut(s) 81
CviKI_1 RGCY 1 cut(s) 81
DdeI CTNAG 1 cut(s) 94
Eam1104I CTCTTC 1 cut(s) 88
EarI CTCTTC 1 cut(s) 88
FaiI YATR 1 cut(s) 45
FalI AAGNNNNNCTT 2 cut(s) 67, 99
Fnu4HI GCNGC 1 cut(s) 79
Fsp4HI GCNGC 1 cut(s) 79
FspEI CC 7 cut(s) 47, 57, 63, 70, 71, 81, 95
GluI GCNGC 1 cut(s) 79
HincII GTYRAC 1 cut(s) 115
HindII GTYRAC 1 cut(s) 115
HinfI GANTC 1 cut(s) 101
HphI GGTGA 2 cut(s) 46, 110
Hpy166II GTNNAC 1 cut(s) 115
Hpy188I TCNGA 1 cut(s) 88
Hpy188III TCNNGA 1 cut(s) 17
Hpy8I GTNNAC 1 cut(s) 115
HpyAV CCTTC 1 cut(s) 65
HpyCH4III ACNGT 1 cut(s) 7
HpyCH4V TGCA 1 cut(s) 120
HpyF3I CTNAG 1 cut(s) 94
LguI GCTCTTC 1 cut(s) 88
LpnPI CCDG 1 cut(s) 81
MboII GAAGA 2 cut(s) 43, 75
MlyI GAGTC 1 cut(s) 110
PciSI GCTCTTC 1 cut(s) 88
PkrI GCNGC 1 cut(s) 80
PleI GAGTC 1 cut(s) 109
PpsI GAGTC 1 cut(s) 109
SapI GCTCTTC 1 cut(s) 88
SatI GCNGC 1 cut(s) 79
SchI GAGTC 1 cut(s) 110
SetI ASST 1 cut(s) 100
SgeI CNNG 2 cut(s) 29, 108
SsiI CCGC 1 cut(s) 78
TaaI ACNGT 1 cut(s) 7
TauI GCSGC 1 cut(s) 81
TspDTI ATGAA 1 cut(s) 32
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.