Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0003538

Physical Location & Seq

Genomic Coordinates Forward (+)

7213636 .. 7217833

Gene Structure 4198 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G058000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGACTGTAGGGAATCAAGACGTGAAAAAGAAGTCTTTTATCCATAAGATTTTCACCATGAAGGAGAGAGAAGGAAGTGGCTCATCTGATTTCCCTGAACCACAGTCCAATCCAGCAGTTGACATTCAATCTATAAGTAGCACAGAGCCTCAGATGCCTGCTGGTCAATATGTTCAGTCCTTTCGAGTGTTTGTAGCAACATGGAATGTAGGAGGGAAATCTCCTCATAATGGCCTAAATCTGGACGATTTTCTTCATGTTAATAATGAATCAGACATATATGTCTTGGGTTTTCAGGAAATTGTCCCTTTAAATGCTGGAAATGTACTAGTTCTAGAAGATAATGAACCTGCAGCAAAATGGCTTACTTTAATCAACCAGTCATTGAACAAATCACTAGACGGGTCTTCAAGTAGCAAGGCTAGTGGTTCACGTTTTTCCTCGAAGCCTTCCCTTAAAAAGGTCAGTAAGACTTTTAGGACAGAGAGTAAAAGGAGATTGAAGAGTTGCAACTGCATTTTTGAACTAGAAAGGAAACATAGTAAGGATTTTTGCTTTCGATGCCAACAACCAAATATAAATGAAGAAGACCTTTCTTCTGAACCGGATGAAGATGGATCAAACGTTTTTGATATATCGGAAATTTCTATGGCATCTACTAGCAACCATTTGAAGTATAGCCTTATAGCTAGTAAGCAAATGGTGGGAATTTTTGTTACCATTTGGGCGAGGAAGGAGCATATACAATATGTTAGCCACTTAAGAATCTCTTGCATAAGTCGTGGAATCATGGGATGCCTTGGAAACAAGGGTTGTATTTCTGTGAGTTTTTTATTCCATCAGACAAGCTTTTGCTTTGTCTGCAGTCACTTGGCATCTGGTGAGAAAGAGGGAGACGAGCTGAGGAGAAATTTGGATGTGTTAGAGATACTCAAGAGCACTCAGTTTCCTAAGATTTGCAAAACAACTCATAGCAGGATGCCGGATAAAATTCTAGGACATGATATGGTTATATGGTTAGGTGACTTGAATTACCGCATTGCTTTGAGCTACTCCGAAACCCGAAAACTTTTGGAAAACAATGACTGGGATGCACTTCTTAACAAAGACCAGCTCAAGATTGAAAGAGAAGCAGAGCGAGTATTCAAAGGATGGAAAGAGGGAAAAATCTACTTTGCACCTACTTACAAATATTTTTATAACTCAGACACTTATTTTGGAGAGATAAAAACATCCAAAAAGAAAAGAAGAACCCCGGCTTGGTGTGATCGAATATTATGGCATGGAAGTGGGATTAAACAACTTTCTTACATACGTGGAGAGTCCCAATTTTCTGACCACCGGCCAGTTTGTGGAACATTTGTTGTGGATGTTGTTGTCAATCAGAATGAATTGAAGAAAGGATCACCTAGCTCTAATATGAAGATTGAAATTGAAGAGCTTTTGCCAACTGCTAGATACTTGAAAAACATGTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004439 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0030258 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0042578 GO:0044237 GO:0044238 GO:0044255 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0052866 GO:0071704 GO:0106019

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

493

Amino Acids

56.01

Weight (kDa)

8.73

Isoelectric Point (pI)

47.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003538)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04980 AT5G04980 AT5G04980 AT5G04980
fragaria_vesca	FvH4_7g04890 FvH4_7g04890 FvH4_7g04890 FvH4_7g04890 FvH4_7g04890 FvH4_7g04890 FvH4_7g04890 FvH4_7g04890 FvH4_7g04890 FvH4_7g04890 FvH4_7g04890
malus_domestica	MD02G1266600.v1.1 MD03G1038300.v1.1 MD03G1038700.v1.1 MD07G1053100.v1.1
prunus_persica	Prupe.2G058000_v2.0.a1
pyrus_communis	pycom02g22810 pycom07g04110 pycom16g16630
rosa_chinensis	RchiOBHm_Chr1g0330941
rosa_laevigata	RLG00000029765
rosa_multiflora	Rmu_sc0002899.1_g000009
rosa_roxburghii	Rroxscaffold_4G00319600
rosa_rugosa	Rorug01G0091100 Rorug01G0091200 Rorug01G0091300 Rorug01G0091400
rosa_samantha	Rh1AG112700 Rh1BG086700 Rh1DG118200
rosa_wichuraiana	Rw1G009180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1200
AasI	GACNNNNNNGTC	1 cut(s)	281
Acc36I	ACCTGC	1 cut(s)	358
AccB7I	CCANNNNNTGG	1 cut(s)	1352
AciI	CCGC	1 cut(s)	1036
AclI	AACGTT	1 cut(s)	624
AclWI	GGATC	2 cut(s)	625, 1411
AcoI	YGGCCR	1 cut(s)	1343
AcsI	RAATTY	4 cut(s)	642, 708, 910, 990
AfaI	GTAC	2 cut(s)	327, 1475
AfiI	CCNNNNNNNGG	5 cut(s)	230, 241, 460, 1260, 1352
AflII	CTTAAG	1 cut(s)	760
AflIII	ACRYGT	1 cut(s)	1470
AhlI	ACTAGT	1 cut(s)	328
AjiI	CACGTC	1 cut(s)	22
AjuI	GAANNNNNNNTTGG	2 cut(s)	1243, 1275
AluBI	AGCT	7 cut(s)	689, 849, 901, 1050, 1114, 1413, 1441
AluI	AGCT	7 cut(s)	689, 849, 901, 1050, 1114, 1413, 1441
Alw21I	GWGCWC	1 cut(s)	941
Alw26I	GTCTC	1 cut(s)	888
AlwI	GGATC	2 cut(s)	625, 1411
AoxI	GGCC	2 cut(s)	232, 1343
ApeKI	GCWGC	1 cut(s)	353
ApoI	RAATTY	4 cut(s)	642, 708, 910, 990
ArsI	GACNNNNNNTTYG	2 cut(s)	1199, 1231
AsuC2I	CCSGG	1 cut(s)	1256
AsuHPI	GGTGA	4 cut(s)	46, 893, 1034, 1398
BbsI	GAAGAC	2 cut(s)	399, 594
Bbv12I	GWGCWC	1 cut(s)	941
BbvCI	CCTCAGC	1 cut(s)	902
BbvI	GCAGC	1 cut(s)	365
BccI	CCATC	3 cut(s)	608, 846, 1146
BcnI	CCSGG	1 cut(s)	1256
BcoDI	GTCTC	1 cut(s)	888
BcuI	ACTAGT	1 cut(s)	328
BfmI	CTRYAG	3 cut(s)	6, 351, 862
BfrI	CTTAAG	1 cut(s)	760
BfuAI	ACCTGC	1 cut(s)	358
BisI	GCNGC	1 cut(s)	354
BlsI	GCNGC	1 cut(s)	355
Bme1390I	CCNGG	1 cut(s)	1256
BmgBI	CACGTC	1 cut(s)	22
BmrFI	CCNGG	1 cut(s)	1256
BmrI	ACTGGG	1 cut(s)	1096
BmsI	GCATC	7 cut(s)	144, 551, 662, 785, 884, 969, 1081
BmuI	ACTGGG	1 cut(s)	1096
BpiI	GAAGAC	2 cut(s)	399, 594
Bpu10I	CCTNAGC	1 cut(s)	902
BpuEI	CTTGAG	2 cut(s)	917, 1100
BpuMI	CCSGG	1 cut(s)	1256
BsaAI	YACGTR	1 cut(s)	1316
BsaJI	CCNNGG	2 cut(s)	799, 1254
BsaWI	WCCGGW	1 cut(s)	604
Bsc4I	CCNNNNNNNGG	5 cut(s)	230, 241, 460, 1260, 1352
Bse118I	RCCGGY	1 cut(s)	1341
Bse1I	ACTGG	3 cut(s)	379, 1091, 1346
Bse3DI	GCAATG	1 cut(s)	1038
BseDI	CCNNGG	2 cut(s)	799, 1254
BseGI	GGATG	8 cut(s)	613, 800, 922, 984, 1096, 1157, 1232, 1375
BseLI	CCNNNNNNNGG	5 cut(s)	230, 241, 460, 1260, 1352
BseMI	GCAATG	1 cut(s)	1038
BseMII	CTCAG	4 cut(s)	164, 893, 956, 1218
BseNI	ACTGG	3 cut(s)	379, 1091, 1346
BseRI	GAGGAG	2 cut(s)	213, 919
BseXI	GCAGC	1 cut(s)	365
BshFI	GGCC	2 cut(s)	234, 1345
BsiHKAI	GWGCWC	1 cut(s)	941
BsiSI	CCGG	4 cut(s)	605, 983, 1256, 1342
BslFI	GGGAC	2 cut(s)	290, 1309
BslI	CCNNNNNNNGG	5 cut(s)	230, 241, 460, 1260, 1352
BsmAI	GTCTC	1 cut(s)	888
BsmBI	CGTCTC	1 cut(s)	888
BsmFI	GGGAC	2 cut(s)	290, 1309
BsnI	GGCC	2 cut(s)	234, 1345
Bsp1286I	GDGCHC	1 cut(s)	941
Bsp143I	GATC	3 cut(s)	617, 1267, 1403
BspACI	CCGC	1 cut(s)	1036
BspANI	GGCC	2 cut(s)	234, 1345
BspCNI	CTCAG	4 cut(s)	163, 894, 955, 1217
BspMAI	CTGCAG	2 cut(s)	355, 866
BspMI	ACCTGC	1 cut(s)	358
BspPI	GGATC	2 cut(s)	625, 1411
BspQI	GCTCTTC	1 cut(s)	1431
BspTI	CTTAAG	1 cut(s)	760
BsrDI	GCAATG	1 cut(s)	1038
BsrFI	RCCGGY	1 cut(s)	1341
BsrI	ACTGG	3 cut(s)	379, 1091, 1346
BssAI	RCCGGY	1 cut(s)	1341
BssECI	CCNNGG	2 cut(s)	799, 1254
BssMI	GATC	3 cut(s)	617, 1267, 1403
BssT1I	CCWWGG	1 cut(s)	799
Bst4CI	ACNGT	2 cut(s)	7, 105
Bst6I	CTCTTC	2 cut(s)	497, 1431
BstAFI	CTTAAG	1 cut(s)	760
BstBAI	YACGTR	1 cut(s)	1316
BstC8I	GCNNGC	1 cut(s)	159
BstDEI	CTNAG	5 cut(s)	150, 902, 942, 951, 1204
BstENI	CCTNNNNNAGG	1 cut(s)	458
BstF5I	GGATG	8 cut(s)	613, 800, 922, 984, 1096, 1157, 1232, 1375
BstKTI	GATC	3 cut(s)	620, 1270, 1406
BstMAI	GTCTC	1 cut(s)	888
BstMBI	GATC	3 cut(s)	617, 1267, 1403
BstMWI	GCNNNNNNNGC	3 cut(s)	154, 561, 861
BstNSI	RCATGY	1 cut(s)	1474
BstSCI	CCNGG	1 cut(s)	1254
BstSFI	CTRYAG	3 cut(s)	6, 351, 862
BstV1I	GCAGC	1 cut(s)	365
BstV2I	GAAGAC	2 cut(s)	399, 594
BsuRI	GGCC	2 cut(s)	234, 1345
BtrI	CACGTC	1 cut(s)	22
BtsCI	GGATG	8 cut(s)	613, 800, 922, 984, 1096, 1157, 1232, 1375
BveI	ACCTGC	1 cut(s)	358
Cac8I	GCNNGC	1 cut(s)	159
Cfr10I	RCCGGY	1 cut(s)	1341
Csp6I	GTAC	2 cut(s)	326, 1474
CspCI	CAANNNNNGTGG	2 cut(s)	406, 441
CviAII	CATG	7 cut(s)	58, 201, 257, 790, 1001, 1283, 1471
CviQI	GTAC	2 cut(s)	326, 1474
DdeI	CTNAG	5 cut(s)	150, 902, 942, 951, 1204
DpnI	GATC	3 cut(s)	619, 1269, 1405
DpnII	GATC	3 cut(s)	617, 1267, 1403
DraI	TTTAAA	1 cut(s)	312
DrdI	GACNNNNNNGTC	1 cut(s)	281
DseDI	GACNNNNNNGTC	1 cut(s)	281
EaeI	YGGCCR	1 cut(s)	1343
Eam1104I	CTCTTC	2 cut(s)	497, 1431
EarI	CTCTTC	2 cut(s)	497, 1431
Eco130I	CCWWGG	1 cut(s)	799
EcoNI	CCTNNNNNAGG	1 cut(s)	458
EcoT14I	CCWWGG	1 cut(s)	799
ErhI	CCWWGG	1 cut(s)	799
Esp3I	CGTCTC	1 cut(s)	888
FaeI	CATG	7 cut(s)	61, 204, 260, 793, 1004, 1286, 1474
FalI	AAGNNNNNCTT	4 cut(s)	576, 608, 754, 786
FaqI	GGGAC	2 cut(s)	290, 1309
FatI	CATG	7 cut(s)	57, 200, 256, 789, 1000, 1282, 1470
Fnu4HI	GCNGC	1 cut(s)	354
FokI	GGATG	8 cut(s)	620, 807, 929, 991, 1103, 1164, 1219, 1382
Fsp4HI	GCNGC	1 cut(s)	354
GluI	GCNGC	1 cut(s)	354
HaeIII	GGCC	2 cut(s)	234, 1345
HapII	CCGG	4 cut(s)	605, 983, 1256, 1342
Hin1II	CATG	7 cut(s)	61, 204, 260, 793, 1004, 1286, 1474
HincII	GTYRAC	1 cut(s)	121
HindII	GTYRAC	1 cut(s)	121
HindIII	AAGCTT	1 cut(s)	847
HinfI	GANTC	5 cut(s)	13, 269, 765, 786, 1322
HpaII	CCGG	4 cut(s)	605, 983, 1256, 1342
HphI	GGTGA	4 cut(s)	46, 893, 1034, 1398
Hpy166II	GTNNAC	2 cut(s)	121, 431
Hpy188III	TCNNGA	6 cut(s)	17, 242, 296, 335, 934, 1117
Hpy8I	GTNNAC	2 cut(s)	121, 431
HpyAV	CCTTC	4 cut(s)	55, 65, 459, 727
HpyCH4III	ACNGT	2 cut(s)	7, 105
HpyCH4IV	ACGT	4 cut(s)	21, 433, 624, 1315
HpyCH4V	TGCA	8 cut(s)	353, 510, 516, 774, 864, 960, 1094, 1178
HpyF10VI	GCNNNNNNNGC	3 cut(s)	154, 561, 861
HpyF3I	CTNAG	5 cut(s)	150, 902, 942, 951, 1204
HpySE526I	ACGT	4 cut(s)	21, 433, 624, 1315
Hsp92II	CATG	7 cut(s)	61, 204, 260, 793, 1004, 1286, 1474
Kzo9I	GATC	3 cut(s)	617, 1267, 1403
LguI	GCTCTTC	1 cut(s)	1431
LmnI	GCTCC	1 cut(s)	736
Lsp1109I	GCAGC	1 cut(s)	365
LweI	GCATC	7 cut(s)	144, 551, 662, 785, 884, 969, 1081
MaeII	ACGT	4 cut(s)	21, 433, 624, 1315
MaeIII	GTNAC	3 cut(s)	715, 866, 1022
MalI	GATC	3 cut(s)	619, 1269, 1405
MboI	GATC	3 cut(s)	617, 1267, 1403
MhlI	GDGCHC	1 cut(s)	941
MluCI	AATT	9 cut(s)	300, 642, 708, 910, 990, 1030, 1328, 1391, 1431
MlyI	GAGTC	1 cut(s)	1331
MnlI	CCTC	8 cut(s)	159, 206, 234, 451, 723, 883, 897, 1153
MseI	TTAA	7 cut(s)	261, 311, 371, 456, 761, 1101, 1296
MslI	CAYNNNNRTG	1 cut(s)	1287
MspCI	CTTAAG	1 cut(s)	760
MspI	CCGG	4 cut(s)	605, 983, 1256, 1342
MspR9I	CCNGG	1 cut(s)	1256
MwoI	GCNNNNNNNGC	3 cut(s)	154, 561, 861
NciI	CCSGG	1 cut(s)	1256
NdeII	GATC	3 cut(s)	617, 1267, 1403
NlaIII	CATG	7 cut(s)	61, 204, 260, 793, 1004, 1286, 1474
NmuCI	GTSAC	2 cut(s)	866, 1022
NspI	RCATGY	1 cut(s)	1474
PciI	ACATGT	1 cut(s)	1470
PciSI	GCTCTTC	1 cut(s)	1431
PfeI	GAWTC	4 cut(s)	13, 269, 765, 786
PflMI	CCANNNNNTGG	1 cut(s)	1352
PkrI	GCNGC	1 cut(s)	355
PleI	GAGTC	1 cut(s)	1330
PpsI	GAGTC	1 cut(s)	1330
Ppu21I	YACGTR	1 cut(s)	1316
PscI	ACATGT	1 cut(s)	1470
PsiI	TTATAA	1 cut(s)	1200
Psp1406I	AACGTT	1 cut(s)	624
PstI	CTGCAG	2 cut(s)	355, 866
RsaI	GTAC	2 cut(s)	327, 1475
RsaNI	GTAC	2 cut(s)	326, 1474
RseI	CAYNNNNRTG	1 cut(s)	1287
SapI	GCTCTTC	1 cut(s)	1431
SaqAI	TTAA	7 cut(s)	261, 311, 371, 456, 761, 1101, 1296
SatI	GCNGC	1 cut(s)	354
Sau3AI	GATC	3 cut(s)	617, 1267, 1403
SchI	GAGTC	1 cut(s)	1331
ScrFI	CCNGG	1 cut(s)	1256
SduI	GDGCHC	1 cut(s)	941
SfaNI	GCATC	7 cut(s)	144, 551, 662, 785, 884, 969, 1081
SfcI	CTRYAG	3 cut(s)	6, 351, 862
SmiMI	CAYNNNNRTG	1 cut(s)	1287
SmlI	CTYRAG	3 cut(s)	760, 932, 1115
SmoI	CTYRAG	3 cut(s)	760, 932, 1115
SpeI	ACTAGT	1 cut(s)	328
Sse9I	AATT	9 cut(s)	300, 642, 708, 910, 990, 1030, 1328, 1391, 1431
SsiI	CCGC	1 cut(s)	1036
SspI	AATATT	2 cut(s)	1193, 1275
StyD4I	CCNGG	1 cut(s)	1254
StyI	CCWWGG	1 cut(s)	799
TaaI	ACNGT	2 cut(s)	7, 105
TaiI	ACGT	4 cut(s)	24, 436, 627, 1318
TaqI	TCGA	4 cut(s)	184, 443, 559, 1270
TasI	AATT	9 cut(s)	300, 642, 708, 910, 990, 1030, 1328, 1391, 1431
TatI	WGTACW	2 cut(s)	325, 1473
TfiI	GAWTC	4 cut(s)	13, 269, 765, 786
Tru1I	TTAA	7 cut(s)	261, 311, 371, 456, 761, 1101, 1296
Tru9I	TTAA	7 cut(s)	261, 311, 371, 456, 761, 1101, 1296
TseFI	GTSAC	2 cut(s)	866, 1022
TseI	GCWGC	1 cut(s)	353
Tsp45I	GTSAC	2 cut(s)	866, 1022
TspDTI	ATGAA	8 cut(s)	74, 245, 282, 360, 597, 624, 1404, 1436
Van91I	CCANNNNNTGG	1 cut(s)	1352
Vha464I	CTTAAG	1 cut(s)	760
XagI	CCTNNNNNAGG	1 cut(s)	458
XapI	RAATTY	4 cut(s)	642, 708, 910, 990
XbaI	TCTAGA	1 cut(s)	334
XceI	RCATGY	1 cut(s)	1474

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.