MD07G1053100.v1.1

Type I inositol 1,4,5-trisphosphate 5-phosphatase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
4914961 .. 4918531
3571 bp
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UTR
Exon/CDS
Intron
MD07G1053100.v1.1.491

Sequence Viewer

Length: 1569 bp
ATGACTGTCAGCAAACATTACGTGAAAAAGAAGTCTTTCATTCATAAAATTTTCACCACAAAGGAGAGAGAAGGAAGCGGCTCATCGGATTTCTTCGAAGCACAGCAGTCTACTCCAGCAGTTGACATTCAATCTACAAGTGACACAGGGTCTCAAATGCCTGCTGGTCAATACGTTCAGTCCCTTCGGGTTTTTGTAGCGACATGGAATGTAGGAGGAAAATCTCCTCATATTGGCCTTAATCTGGATGATTTTCTTCAAGTTTATAATGAATCAGACATATATGTCTTGGGTTTTCAAGAAATTGTTCCGTTAAATGCTGGAAATGTGCTAGTTCTAGAAGATAATGAACCTGCAGCAAAATGGCTTGCTTTAATTAATCAGTCACTAAACAAATCACCTGAGGGGTGTTCAACAAGCAAATCCAGCCTAGGTGGTTCACGATTTTCATCAAAGCCTTCCCTTAAAAAGGTCAGTAAGGCTTTTAGGACAGAGAGCAAACGGAGGTTGAAGAGTTGCAACTGCCCCTTTGAACTGGAGAGGAAATATAGTAAAGATTTTTGTTTTAGATGCCAACAACCAAACATAAACGAAGACGACCTTTCTTCAGAACCGGATGAGGACGGATCTAATGTCTTTGATATATCAGAAATTTCCATGGCCTCTACTACCAACCAAATGAAGTACAGCCTTATAGCAAGTAAACAAATGGTAGGAATTTTCGTGACTATTTGGGCAAGGAAAGAGTGTATACAATATGTTAGCCACTTGAGAATCTCTTGCATCAGTCGTGGGATCATGGGATGCCTTGGAAACAAGGGCTGTATATCTGTGAGCTTTTTATTCCATCAGACAAGCTTTTGCTTTGTCTGCAGTCATTTGGCATCTGGTGAGAAGGAGGGCGACGAGCTTAGGAGAAATTTGGATGTATTAGAGATACTTAAAAGCACTCAGTTTCCGAAGATTTGCAAAACGGCTCATAGTAGGATGCCAGATAAAATTCTAGGACATGATATGGTCATATGGTTAGGAGACTTGAATTACCGCATTGCTTTGAGCTACTCTGAAACCCGAAAGCTTTTGGTGGACAATGACTGGGATGCACTTCTTGACAAAGATCAGCTCAAAATTGAGAGAGAAGCAGGGCGAGTATTCAAAGGATGGAAGGAGGGAAAAATCTACTTTGCACCTACTTACAAATACTTTTATAACTCAGACACTTATTTCGGAGAGATAAAAACATCGAAAAAGAAAAGAAGAACACCAGCCTGGTGTGACAGAATACTATGGCATGGAAATGGGATTAGACAACTTTCTTACATAAGGGGAGAGTCCCGGTTCTCTGACCATCGACCAGTGTGTGCAACATTTTTTGTGGATGCTGTAGTTAATGAGAATGAAACGAAGAACGGATCGCCTAGCTCTAATATGAAAATCGAAATTGAAGAGCTCTTACCAACTGCGAGATACCTGAACAACATGCAAGTCATAGCTAAATTTGGTAGTTTCTTTGATTGTCCACTGTTAAAGGTCTTTGCCCTGACTATCCTCTTGTATTGTCAGTACTAA

Protein Analysis

523

Amino Acids

59.3

Weight (kDa)

8.69

Isoelectric Point (pI)

44.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo_endo_phos2 PF22669 224 - 455 8.9e-63 Endonuclease/Exonuclease/phosphatase family 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 267, 1209
AasI GACNNNNNNGTC 1 cut(s) 284
Acc36I ACCTGC 1 cut(s) 361
AccI GTMKAC 2 cut(s) 110, 751
AciI CCGC 2 cut(s) 78, 1045
AclWI GGATC 3 cut(s) 634, 803, 1420
AcsI RAATTY 6 cut(s) 48, 651, 717, 919, 999, 1496
AcuI CTGAAG 1 cut(s) 591
AfaI GTAC 2 cut(s) 686, 1565
AfiI CCNNNNNNNGG 3 cut(s) 233, 244, 469
AgsI TTSAA 9 cut(s) 131, 260, 299, 414, 511, 533, 1039, 1156, 1445
AhdI GACNNNNNGTC 1 cut(s) 148
AjnI CCWGG 1 cut(s) 1268
AluBI AGCT 9 cut(s) 837, 858, 910, 1059, 1078, 1123, 1422, 1450, 1493
AluI AGCT 9 cut(s) 837, 858, 910, 1059, 1078, 1123, 1422, 1450, 1493
Alw21I GWGCWC 1 cut(s) 1452
Alw26I GTCTC 2 cut(s) 156, 1026
AlwI GGATC 3 cut(s) 634, 803, 1420
AoxI GGCC 2 cut(s) 235, 660
ApeKI GCWGC 1 cut(s) 356
ApoI RAATTY 6 cut(s) 48, 651, 717, 919, 999, 1496
ArsI GACNNNNNNTTYG 2 cut(s) 1208, 1240
AseI ATTAAT 1 cut(s) 378
Asp700I GAANNNNTTC 2 cut(s) 35, 306
AspA2I CCTAGG 1 cut(s) 430
AsuC2I CCSGG 1 cut(s) 1336
AsuHPI GGTGA 3 cut(s) 46, 390, 902
AsuII TTCGAA 1 cut(s) 96
AvrII CCTAGG 1 cut(s) 430
AxyI CCTNAGG 1 cut(s) 402
BanII GRGCYC 1 cut(s) 1452
BarI GAAGNNNNNNTAC 2 cut(s) 1437, 1469
BbsI GAAGAC 1 cut(s) 600
Bbv12I GWGCWC 1 cut(s) 1452
BbvI GCAGC 1 cut(s) 368
BccI CCATC 3 cut(s) 855, 1155, 1356
BceAI ACGGC 1 cut(s) 990
BciT130I CCWGG 1 cut(s) 1270
BcnI CCSGG 1 cut(s) 1336
BcoDI GTCTC 2 cut(s) 156, 1026
BfaI CTAG 5 cut(s) 332, 338, 431, 1004, 1419
BfmI CTRYAG 3 cut(s) 354, 871, 1383
BfuAI ACCTGC 1 cut(s) 361
BisI GCNGC 2 cut(s) 79, 357
BlnI CCTAGG 1 cut(s) 430
BlsI GCNGC 2 cut(s) 80, 358
BmcAI AGTACT 1 cut(s) 1565
Bme1390I CCNGG 2 cut(s) 1270, 1336
BmeRI GACNNNNNGTC 1 cut(s) 148
BmrFI CCNGG 2 cut(s) 1270, 1336
BmrI ACTGGG 1 cut(s) 1105
BmsI GCATC 7 cut(s) 560, 792, 794, 893, 978, 1090, 1369
BmuI ACTGGG 1 cut(s) 1105
BpiI GAAGAC 1 cut(s) 600
BpmI CTGGAG 2 cut(s) 99, 557
Bpu10I CCTNAGC 1 cut(s) 911
Bpu14I TTCGAA 1 cut(s) 96
BpuEI CTTGAG 1 cut(s) 790
BpuMI CCSGG 1 cut(s) 1336
BsaAI YACGTR 1 cut(s) 22
BsaBI GATNNNNATC 1 cut(s) 448
BsaI GGTCTC 1 cut(s) 156
BsaJI CCNNGG 3 cut(s) 430, 657, 808
BsaWI WCCGGW 1 cut(s) 613
Bsc4I CCNNNNNNNGG 3 cut(s) 233, 244, 469
Bse1I ACTGG 3 cut(s) 540, 1100, 1355
Bse21I CCTNAGG 1 cut(s) 402
Bse3DI GCAATG 1 cut(s) 1047
Bse8I GATNNNNATC 1 cut(s) 448
BseBI CCWGG 1 cut(s) 1270
BseDI CCNNGG 3 cut(s) 430, 657, 808
BseGI GGATG 8 cut(s) 253, 622, 809, 931, 993, 1105, 1166, 1384
BseJI GATNNNNATC 1 cut(s) 448
BseLI CCNNNNNNNGG 3 cut(s) 233, 244, 469
BseMI GCAATG 1 cut(s) 1047
BseMII CTCAG 3 cut(s) 393, 965, 1227
BseNI ACTGG 3 cut(s) 540, 1100, 1355
BseRI GAGGAG 1 cut(s) 216
BseXI GCAGC 1 cut(s) 368
BshFI GGCC 2 cut(s) 237, 662
BsiHKAI GWGCWC 1 cut(s) 1452
BsiSI CCGG 2 cut(s) 614, 1336
BslFI GGGAC 2 cut(s) 166, 1318
BslI CCNNNNNNNGG 3 cut(s) 233, 244, 469
BsmAI GTCTC 2 cut(s) 156, 1026
BsmFI GGGAC 2 cut(s) 166, 1318
BsnI GGCC 2 cut(s) 237, 662
Bso31I GGTCTC 1 cut(s) 156
Bsp119I TTCGAA 1 cut(s) 96
Bsp1286I GDGCHC 1 cut(s) 1452
Bsp143I GATC 4 cut(s) 626, 795, 1117, 1412
Bsp19I CCATGG 1 cut(s) 657
BspACI CCGC 2 cut(s) 78, 1045
BspANI GGCC 2 cut(s) 237, 662
BspCNI CTCAG 3 cut(s) 394, 964, 1226
BspMAI CTGCAG 2 cut(s) 358, 875
BspMI ACCTGC 1 cut(s) 361
BspPI GGATC 3 cut(s) 634, 803, 1420
BspQI GCTCTTC 1 cut(s) 1440
BspT104I TTCGAA 1 cut(s) 96
BspTNI GGTCTC 1 cut(s) 156
BsrDI GCAATG 1 cut(s) 1047
BsrI ACTGG 3 cut(s) 540, 1100, 1355
BssECI CCNNGG 3 cut(s) 430, 657, 808
BssMI GATC 4 cut(s) 626, 795, 1117, 1412
BssNAI GTATAC 1 cut(s) 752
BssT1I CCWWGG 3 cut(s) 430, 657, 808
Bst1107I GTATAC 1 cut(s) 752
Bst2UI CCWGG 1 cut(s) 1270
Bst4CI ACNGT 2 cut(s) 7, 1524
Bst6I CTCTTC 2 cut(s) 506, 1440
BstBAI YACGTR 1 cut(s) 22
BstBI TTCGAA 1 cut(s) 96
BstC8I GCNNGC 2 cut(s) 162, 369
BstDEI CTNAG 4 cut(s) 402, 911, 951, 1213
BstDSI CCRYGG 1 cut(s) 657
BstENI CCTNNNNNAGG 1 cut(s) 467
BstF5I GGATG 8 cut(s) 253, 622, 809, 931, 993, 1105, 1166, 1384
BstKTI GATC 4 cut(s) 629, 798, 1120, 1415
BstMAI GTCTC 2 cut(s) 156, 1026
BstMBI GATC 4 cut(s) 626, 795, 1117, 1412
BstMWI GCNNNNNNNGC 2 cut(s) 426, 870
BstNI CCWGG 1 cut(s) 1270
BstNSI RCATGY 1 cut(s) 1483
BstSCI CCNGG 2 cut(s) 1268, 1334
BstSFI CTRYAG 3 cut(s) 354, 871, 1383
BstV1I GCAGC 1 cut(s) 368
BstV2I GAAGAC 1 cut(s) 600
BstX2I RGATCY 1 cut(s) 626
BstYI RGATCY 1 cut(s) 626
BstZ17I GTATAC 1 cut(s) 752
Bsu36I CCTNAGG 1 cut(s) 402
BsuRI GGCC 2 cut(s) 237, 662
BtgI CCRYGG 1 cut(s) 657
BtsCI GGATG 8 cut(s) 253, 622, 809, 931, 993, 1105, 1166, 1384
BtsIMutI CAGTG 2 cut(s) 1362, 1520
BveI ACCTGC 1 cut(s) 361
Cac8I GCNNGC 2 cut(s) 162, 369
Csp6I GTAC 2 cut(s) 685, 1564
CviAII CATG 6 cut(s) 204, 658, 799, 1010, 1292, 1480
CviQI GTAC 2 cut(s) 685, 1564
DdeI CTNAG 4 cut(s) 402, 911, 951, 1213
DpnI GATC 4 cut(s) 628, 797, 1119, 1414
DpnII GATC 4 cut(s) 626, 795, 1117, 1412
DrdI GACNNNNNNGTC 1 cut(s) 284
DriI GACNNNNNGTC 1 cut(s) 148
DseDI GACNNNNNNGTC 1 cut(s) 284
Eam1104I CTCTTC 2 cut(s) 506, 1440
Eam1105I GACNNNNNGTC 1 cut(s) 148
EarI CTCTTC 2 cut(s) 506, 1440
Ecl136II GAGCTC 1 cut(s) 1450
Eco130I CCWWGG 3 cut(s) 430, 657, 808
Eco24I GRGCYC 1 cut(s) 1452
Eco31I GGTCTC 1 cut(s) 156
Eco53kI GAGCTC 1 cut(s) 1450
Eco57I CTGAAG 1 cut(s) 591
Eco81I CCTNAGG 1 cut(s) 402
EcoICRI GAGCTC 1 cut(s) 1450
EcoNI CCTNNNNNAGG 1 cut(s) 467
EcoRII CCWGG 1 cut(s) 1268
EcoT14I CCWWGG 3 cut(s) 430, 657, 808
EcoT38I GRGCYC 1 cut(s) 1452
ErhI CCWWGG 3 cut(s) 430, 657, 808
FaeI CATG 6 cut(s) 207, 661, 802, 1013, 1295, 1483
FalI AAGNNNNNCTT 2 cut(s) 585, 617
FaqI GGGAC 2 cut(s) 166, 1318
FatI CATG 6 cut(s) 203, 657, 798, 1009, 1291, 1479
FauNDI CATATG 1 cut(s) 1022
FblI GTMKAC 2 cut(s) 110, 751
Fnu4HI GCNGC 2 cut(s) 79, 357
FokI GGATG 8 cut(s) 260, 629, 816, 938, 1000, 1112, 1173, 1391
FriOI GRGCYC 1 cut(s) 1452
Fsp4HI GCNGC 2 cut(s) 79, 357
FspBI CTAG 5 cut(s) 332, 338, 431, 1004, 1419
GluI GCNGC 2 cut(s) 79, 357
GsuI CTGGAG 2 cut(s) 99, 557
HaeIII GGCC 2 cut(s) 237, 662
HapII CCGG 2 cut(s) 614, 1336
Hin1II CATG 6 cut(s) 207, 661, 802, 1013, 1295, 1483
HincII GTYRAC 1 cut(s) 124
HindII GTYRAC 1 cut(s) 124
HindIII AAGCTT 2 cut(s) 856, 1076
HinfI GANTC 3 cut(s) 272, 774, 1331
HpaII CCGG 2 cut(s) 614, 1336
HphI GGTGA 3 cut(s) 46, 390, 902
Hpy166II GTNNAC 7 cut(s) 111, 124, 440, 704, 752, 1087, 1520
Hpy188III TCNNGA 6 cut(s) 245, 299, 338, 441, 724, 1109
Hpy8I GTNNAC 7 cut(s) 111, 124, 440, 704, 752, 1087, 1520
Hpy99I CGWCG 1 cut(s) 908
HpyAV CCTTC 5 cut(s) 65, 194, 468, 889, 1159
HpyCH4III ACNGT 2 cut(s) 7, 1524
HpyCH4IV ACGT 2 cut(s) 21, 174
HpyCH4V TGCA 9 cut(s) 356, 519, 783, 873, 969, 1103, 1187, 1364, 1483
HpyF10VI GCNNNNNNNGC 2 cut(s) 426, 870
HpyF3I CTNAG 4 cut(s) 402, 911, 951, 1213
HpySE526I ACGT 2 cut(s) 21, 174
Hsp92II CATG 6 cut(s) 207, 661, 802, 1013, 1295, 1483
Kzo9I GATC 4 cut(s) 626, 795, 1117, 1412
LguI GCTCTTC 1 cut(s) 1440
Lsp1109I GCAGC 1 cut(s) 368
LweI GCATC 7 cut(s) 560, 792, 794, 893, 978, 1090, 1369
MaeI CTAG 5 cut(s) 332, 338, 431, 1004, 1419
MaeII ACGT 2 cut(s) 21, 174
MaeIII GTNAC 4 cut(s) 140, 384, 724, 1274
MalI GATC 4 cut(s) 628, 797, 1119, 1414
MboI GATC 4 cut(s) 626, 795, 1117, 1412
MflI RGATCY 1 cut(s) 626
MhlI GDGCHC 1 cut(s) 1452
MlyI GAGTC 1 cut(s) 1340
MroXI GAANNNNTTC 2 cut(s) 35, 306
MseI TTAA 8 cut(s) 240, 314, 374, 378, 465, 942, 1389, 1526
MslI CAYNNNNRTG 1 cut(s) 1296
MspI CCGG 2 cut(s) 614, 1336
MspR9I CCNGG 2 cut(s) 1270, 1336
MvaI CCWGG 1 cut(s) 1270
MwoI GCNNNNNNNGC 2 cut(s) 426, 870
NciI CCSGG 1 cut(s) 1336
NcoI CCATGG 1 cut(s) 657
NdeI CATATG 1 cut(s) 1022
NdeII GATC 4 cut(s) 626, 795, 1117, 1412
NlaIII CATG 6 cut(s) 207, 661, 802, 1013, 1295, 1483
NmuCI GTSAC 4 cut(s) 140, 384, 724, 1274
NspI RCATGY 1 cut(s) 1483
NspV TTCGAA 1 cut(s) 96
PacI TTAATTAA 1 cut(s) 378
PciSI GCTCTTC 1 cut(s) 1440
PdmI GAANNNNTTC 2 cut(s) 35, 306
PfeI GAWTC 2 cut(s) 272, 774
PkrI GCNGC 2 cut(s) 80, 358
PleI GAGTC 1 cut(s) 1339
PpsI GAGTC 1 cut(s) 1339
Ppu21I YACGTR 1 cut(s) 22
PshBI ATTAAT 1 cut(s) 378
PsiI TTATAA 2 cut(s) 267, 1209
Psp124BI GAGCTC 1 cut(s) 1452
Psp6I CCWGG 1 cut(s) 1268
PspGI CCWGG 1 cut(s) 1268
PstI CTGCAG 2 cut(s) 358, 875
PsuI RGATCY 1 cut(s) 626
RsaI GTAC 2 cut(s) 686, 1565
RsaNI GTAC 2 cut(s) 685, 1564
RseI CAYNNNNRTG 1 cut(s) 1296
SacI GAGCTC 1 cut(s) 1452
SapI GCTCTTC 1 cut(s) 1440
SaqAI TTAA 8 cut(s) 240, 314, 374, 378, 465, 942, 1389, 1526
SatI GCNGC 2 cut(s) 79, 357
Sau3AI GATC 4 cut(s) 626, 795, 1117, 1412
ScaI AGTACT 1 cut(s) 1565
SchI GAGTC 1 cut(s) 1340
ScrFI CCNGG 2 cut(s) 1270, 1336
SduI GDGCHC 1 cut(s) 1452
SfaNI GCATC 7 cut(s) 560, 792, 794, 893, 978, 1090, 1369
SfcI CTRYAG 3 cut(s) 354, 871, 1383
SfuI TTCGAA 1 cut(s) 96
SmiMI CAYNNNNRTG 1 cut(s) 1296
SmlI CTYRAG 1 cut(s) 769
SmoI CTYRAG 1 cut(s) 769
SsiI CCGC 2 cut(s) 78, 1045
SspMI CTAG 5 cut(s) 332, 338, 431, 1004, 1419
SstI GAGCTC 1 cut(s) 1452
StyD4I CCNGG 2 cut(s) 1268, 1334
StyI CCWWGG 3 cut(s) 430, 657, 808
TaaI ACNGT 2 cut(s) 7, 1524
TaiI ACGT 2 cut(s) 24, 177
TaqI TCGA 4 cut(s) 96, 1244, 1351, 1437
TatI WGTACW 2 cut(s) 684, 1563
TauI GCSGC 1 cut(s) 81
TfiI GAWTC 2 cut(s) 272, 774
Tru1I TTAA 8 cut(s) 240, 314, 374, 378, 465, 942, 1389, 1526
Tru9I TTAA 8 cut(s) 240, 314, 374, 378, 465, 942, 1389, 1526
TscAI CASTG 2 cut(s) 1362, 1527
TseFI GTSAC 4 cut(s) 140, 384, 724, 1274
TseI GCWGC 1 cut(s) 356
Tsp45I GTSAC 4 cut(s) 140, 384, 724, 1274
TspDTI ATGAA 8 cut(s) 28, 32, 285, 363, 438, 695, 1413, 1445
TspGWI ACGGA 4 cut(s) 300, 517, 639, 1425
TspRI CASTG 2 cut(s) 1362, 1527
VspI ATTAAT 1 cut(s) 378
XagI CCTNNNNNAGG 1 cut(s) 467
XapI RAATTY 6 cut(s) 48, 651, 717, 919, 999, 1496
XbaI TCTAGA 1 cut(s) 337
XceI RCATGY 1 cut(s) 1483
XmaJI CCTAGG 1 cut(s) 430
XmiI GTMKAC 2 cut(s) 110, 751
XmnI GAANNNNTTC 2 cut(s) 35, 306
XspI CTAG 5 cut(s) 332, 338, 431, 1004, 1419
ZrmI AGTACT 1 cut(s) 1565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.