Belongs to the PdxS SNZ family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G38230 AT5G01410 AT5G01410 |
| fragaria_vesca | FvH4_3g38650 FvH4_6g11420 |
| malus_domestica | MD04G1153300.v1.1 MD11G1073500.v1.1 |
| prunus_persica | Prupe.6G277500_v2.0.a1 Prupe.8G053100_v2.0.a1 |
| pyrus_communis | pycom04g13870 pycom11g06100 pycom12g15860 |
| rosa_chinensis | RchiOBHm_Chr1g0327251 RchiOBHm_Chr3g0463101 RchiOBHm_Chr5g0069681 |
| rosa_laevigata | RLG00000024812 RLG00000036085 |
| rosa_multiflora | Rmu_sc0000738.1_g000036 Rmu_sc0000766.1_g000039 Rmu_sc0001791.1_g000010 Rmu_sc0007688.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00011400 Rroxscaffold_6G00416960 |
| rosa_rugosa | Rorug03G0061400 Rorug05G0399200 |
| rosa_samantha | Rh2CG209300 Rh3AG119600 Rh3BG124100 Rh3CG126000 Rh3DG125100 Rh5BG265000 Rh5BG475000 Rh5CG498600 Rh5DG486500 |
| rosa_wichuraiana | Rw3G010120 Rw5G042550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 149 |
| AatII | GACGTC | 1 cut(s) | 123 |
| Acc36I | ACCTGC | 1 cut(s) | 149 |
| AccB1I | GGYRCC | 2 cut(s) | 415, 619 |
| AccBSI | CCGCTC | 1 cut(s) | 771 |
| AccI | GTMKAC | 1 cut(s) | 351 |
| AccII | CGCG | 8 cut(s) | 23, 102, 189, 207, 476, 605, 617, 710 |
| AccIII | TCCGGA | 1 cut(s) | 486 |
| AclWI | GGATC | 2 cut(s) | 230, 478 |
| AcuI | CTGAAG | 1 cut(s) | 908 |
| AcvI | CACGTG | 1 cut(s) | 538 |
| AcyI | GRCGYC | 5 cut(s) | 120, 219, 339, 620, 698 |
| AfaI | GTAC | 2 cut(s) | 29, 626 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 283, 300, 448, 466, 552, 829 |
| AgsI | TTSAA | 2 cut(s) | 766, 883 |
| AjnI | CCWGG | 1 cut(s) | 180 |
| AleI | CACNNNNGTG | 1 cut(s) | 822 |
| AluBI | AGCT | 4 cut(s) | 332, 652, 727, 852 |
| AluI | AGCT | 4 cut(s) | 332, 652, 727, 852 |
| Alw21I | GWGCWC | 1 cut(s) | 675 |
| Alw44I | GTGCAC | 1 cut(s) | 671 |
| AlwI | GGATC | 2 cut(s) | 230, 478 |
| Ama87I | CYCGRG | 1 cut(s) | 141 |
| Aor13HI | TCCGGA | 1 cut(s) | 486 |
| AoxI | GGCC | 7 cut(s) | 82, 177, 264, 291, 315, 450, 501 |
| ApaLI | GTGCAC | 1 cut(s) | 671 |
| ApeKI | GCWGC | 3 cut(s) | 649, 724, 852 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 728, 760 |
| AspLEI | GCGC | 7 cut(s) | 41, 170, 189, 209, 476, 622, 715 |
| AspS9I | GGNCC | 4 cut(s) | 178, 316, 451, 543 |
| AsuC2I | CCSGG | 5 cut(s) | 226, 413, 467, 779, 830 |
| AsuHPI | GGTGA | 5 cut(s) | 589, 646, 785, 823, 859 |
| AvaI | CYCGRG | 1 cut(s) | 141 |
| AvaII | GGWCC | 1 cut(s) | 543 |
| BaeGI | GKGCMC | 2 cut(s) | 306, 675 |
| BanI | GGYRCC | 2 cut(s) | 415, 619 |
| BbrPI | CACGTG | 1 cut(s) | 538 |
| Bbv12I | GWGCWC | 1 cut(s) | 675 |
| BbvCI | CCTCAGC | 1 cut(s) | 150 |
| BbvI | GCAGC | 3 cut(s) | 661, 736, 839 |
| BccI | CCATC | 2 cut(s) | 544, 865 |
| BceAI | ACGGC | 6 cut(s) | 52, 155, 251, 403, 444, 607 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 424, 458 |
| BciT130I | CCWGG | 1 cut(s) | 182 |
| BcnI | CCSGG | 5 cut(s) | 226, 413, 467, 779, 830 |
| BfoI | RGCGCY | 2 cut(s) | 623, 716 |
| BfuAI | ACCTGC | 1 cut(s) | 149 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 137, 176 |
| Bme1390I | CCNGG | 6 cut(s) | 182, 226, 413, 467, 779, 830 |
| Bme18I | GGWCC | 1 cut(s) | 543 |
| BmeT110I | CYCGRG | 1 cut(s) | 141 |
| BmgT120I | GGNCC | 4 cut(s) | 178, 316, 451, 543 |
| BmiI | GGNNCC | 4 cut(s) | 417, 440, 508, 621 |
| BmrFI | CCNGG | 6 cut(s) | 182, 226, 413, 467, 779, 830 |
| BmsI | GCATC | 2 cut(s) | 627, 711 |
| BpmI | CTGGAG | 1 cut(s) | 203 |
| Bpu10I | CCTNAGC | 1 cut(s) | 150 |
| BpuMI | CCSGG | 5 cut(s) | 226, 413, 467, 779, 830 |
| BsaAI | YACGTR | 1 cut(s) | 538 |
| BsaHI | GRCGYC | 5 cut(s) | 120, 219, 339, 620, 698 |
| BsaJI | CCNNGG | 4 cut(s) | 100, 180, 211, 442 |
| BsaWI | WCCGGW | 3 cut(s) | 486, 509, 664 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 283, 300, 448, 466, 552, 829 |
| Bse118I | RCCGGY | 1 cut(s) | 700 |
| BseAI | TCCGGA | 1 cut(s) | 486 |
| BseBI | CCWGG | 1 cut(s) | 182 |
| BseDI | CCNNGG | 4 cut(s) | 100, 180, 211, 442 |
| BseGI | GGATG | 4 cut(s) | 201, 234, 838, 898 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 283, 300, 448, 466, 552, 829 |
| BseMII | CTCAG | 2 cut(s) | 141, 915 |
| BseRI | GAGGAG | 1 cut(s) | 167 |
| BseSI | GKGCMC | 2 cut(s) | 306, 675 |
| BseXI | GCAGC | 3 cut(s) | 661, 736, 839 |
| BseYI | CCCAGC | 2 cut(s) | 652, 727 |
| BsgI | GTGCAG | 1 cut(s) | 454 |
| Bsh1236I | CGCG | 8 cut(s) | 23, 102, 189, 207, 476, 605, 617, 710 |
| BshFI | GGCC | 7 cut(s) | 84, 179, 266, 293, 317, 452, 503 |
| BshNI | GGYRCC | 2 cut(s) | 415, 619 |
| BsiHKAI | GWGCWC | 1 cut(s) | 675 |
| BsiHKCI | CYCGRG | 1 cut(s) | 141 |
| BsiWI | CGTACG | 1 cut(s) | 624 |
| BslFI | GGGAC | 2 cut(s) | 176, 569 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 283, 300, 448, 466, 552, 829 |
| BsmFI | GGGAC | 2 cut(s) | 176, 569 |
| BsnI | GGCC | 7 cut(s) | 84, 179, 266, 293, 317, 452, 503 |
| BsoBI | CYCGRG | 1 cut(s) | 141 |
| Bsp1286I | GDGCHC | 2 cut(s) | 306, 675 |
| Bsp13I | TCCGGA | 1 cut(s) | 486 |
| Bsp143I | GATC | 4 cut(s) | 235, 483, 612, 628 |
| Bsp68I | TCGCGA | 1 cut(s) | 605 |
| BspANI | GGCC | 7 cut(s) | 84, 179, 266, 293, 317, 452, 503 |
| BspCNI | CTCAG | 2 cut(s) | 142, 916 |
| BspEI | TCCGGA | 1 cut(s) | 486 |
| BspFNI | CGCG | 8 cut(s) | 23, 102, 189, 207, 476, 605, 617, 710 |
| BspLI | GGNNCC | 4 cut(s) | 417, 440, 508, 621 |
| BspMI | ACCTGC | 1 cut(s) | 149 |
| BspPI | GGATC | 2 cut(s) | 230, 478 |
| BspT107I | GGYRCC | 2 cut(s) | 415, 619 |
| BsrBI | CCGCTC | 1 cut(s) | 771 |
| BsrFI | RCCGGY | 1 cut(s) | 700 |
| BssAI | RCCGGY | 1 cut(s) | 700 |
| BssECI | CCNNGG | 4 cut(s) | 100, 180, 211, 442 |
| BssMI | GATC | 4 cut(s) | 235, 483, 612, 628 |
| BssNI | GRCGYC | 5 cut(s) | 120, 219, 339, 620, 698 |
| BssT1I | CCWWGG | 1 cut(s) | 211 |
| Bst2UI | CCWGG | 1 cut(s) | 182 |
| Bst4CI | ACNGT | 1 cut(s) | 824 |
| BstACI | GRCGYC | 5 cut(s) | 120, 219, 339, 620, 698 |
| BstBAI | YACGTR | 1 cut(s) | 538 |
| BstC8I | GCNNGC | 8 cut(s) | 56, 138, 166, 264, 702, 789, 807, 840 |
| BstDEI | CTNAG | 2 cut(s) | 150, 924 |
| BstDSI | CCRYGG | 1 cut(s) | 100 |
| BstEII | GGTNACC | 1 cut(s) | 773 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 446 |
| BstF5I | GGATG | 4 cut(s) | 201, 234, 838, 898 |
| BstFNI | CGCG | 8 cut(s) | 23, 102, 189, 207, 476, 605, 617, 710 |
| BstH2I | RGCGCY | 2 cut(s) | 623, 716 |
| BstHHI | GCGC | 7 cut(s) | 41, 170, 189, 209, 476, 622, 715 |
| BstKTI | GATC | 4 cut(s) | 238, 486, 615, 631 |
| BstMBI | GATC | 4 cut(s) | 235, 483, 612, 628 |
| BstNI | CCWGG | 1 cut(s) | 182 |
| BstPI | GGTNACC | 1 cut(s) | 773 |
| BstSCI | CCNGG | 6 cut(s) | 180, 224, 411, 465, 777, 828 |
| BstSLI | GKGCMC | 2 cut(s) | 306, 675 |
| BstUI | CGCG | 8 cut(s) | 23, 102, 189, 207, 476, 605, 617, 710 |
| BstV1I | GCAGC | 3 cut(s) | 661, 736, 839 |
| BsuRI | GGCC | 7 cut(s) | 84, 179, 266, 293, 317, 452, 503 |
| BtgI | CCRYGG | 1 cut(s) | 100 |
| BtgZI | GCGATG | 2 cut(s) | 494, 884 |
| BtsCI | GGATG | 4 cut(s) | 201, 234, 838, 898 |
| BtuMI | TCGCGA | 1 cut(s) | 605 |
| BveI | ACCTGC | 1 cut(s) | 149 |
| Cac8I | GCNNGC | 8 cut(s) | 56, 138, 166, 264, 702, 789, 807, 840 |
| CfoI | GCGC | 7 cut(s) | 41, 170, 189, 209, 476, 622, 715 |
| Cfr10I | RCCGGY | 1 cut(s) | 700 |
| Cfr13I | GGNCC | 4 cut(s) | 178, 316, 451, 543 |
| Cfr42I | CCGCGG | 1 cut(s) | 103 |
| CpoI | CGGWCCG | 1 cut(s) | 543 |
| CseI | GACGC | 6 cut(s) | 178, 208, 328, 706, 716, 823 |
| Csp6I | GTAC | 2 cut(s) | 28, 625 |
| CspI | CGGWCCG | 1 cut(s) | 543 |
| CviAII | CATG | 3 cut(s) | 175, 283, 577 |
| CviQI | GTAC | 2 cut(s) | 28, 625 |
| DdeI | CTNAG | 2 cut(s) | 150, 924 |
| DinI | GGCGCC | 1 cut(s) | 621 |
| DpnI | GATC | 4 cut(s) | 237, 485, 614, 630 |
| DpnII | GATC | 4 cut(s) | 235, 483, 612, 628 |
| EciI | GGCGGA | 3 cut(s) | 446, 719, 857 |
| Eco130I | CCWWGG | 1 cut(s) | 211 |
| Eco47I | GGWCC | 1 cut(s) | 543 |
| Eco57I | CTGAAG | 1 cut(s) | 908 |
| Eco72I | CACGTG | 1 cut(s) | 538 |
| Eco88I | CYCGRG | 1 cut(s) | 141 |
| Eco91I | GGTNACC | 1 cut(s) | 773 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 446 |
| EcoO109I | RGGNCCY | 1 cut(s) | 451 |
| EcoO65I | GGTNACC | 1 cut(s) | 773 |
| EcoRII | CCWGG | 1 cut(s) | 180 |
| EcoT14I | CCWWGG | 1 cut(s) | 211 |
| EgeI | GGCGCC | 1 cut(s) | 621 |
| EheI | GGCGCC | 1 cut(s) | 621 |
| ErhI | CCWWGG | 1 cut(s) | 211 |
| FaeI | CATG | 3 cut(s) | 178, 286, 580 |
| FaiI | YATR | 4 cut(s) | 116, 176, 284, 578 |
| FaqI | GGGAC | 2 cut(s) | 176, 569 |
| FatI | CATG | 3 cut(s) | 174, 282, 576 |
| FauI | CCCGC | 5 cut(s) | 202, 422, 676, 780, 848 |
| FblI | GTMKAC | 1 cut(s) | 351 |
| FokI | GGATG | 4 cut(s) | 188, 241, 845, 905 |
| GlaI | GCGC | 7 cut(s) | 40, 169, 188, 208, 475, 621, 714 |
| GsaI | CCCAGC | 2 cut(s) | 656, 731 |
| GsuI | CTGGAG | 1 cut(s) | 203 |
| HaeII | RGCGCY | 2 cut(s) | 623, 716 |
| HaeIII | GGCC | 7 cut(s) | 84, 179, 266, 293, 317, 452, 503 |
| HgaI | GACGC | 6 cut(s) | 178, 208, 328, 706, 716, 823 |
| HhaI | GCGC | 7 cut(s) | 41, 170, 189, 209, 476, 622, 715 |
| Hin1I | GRCGYC | 5 cut(s) | 120, 219, 339, 620, 698 |
| Hin1II | CATG | 3 cut(s) | 178, 286, 580 |
| Hin6I | GCGC | 7 cut(s) | 39, 168, 187, 207, 474, 620, 713 |
| HinP1I | GCGC | 7 cut(s) | 39, 168, 187, 207, 474, 620, 713 |
| HincII | GTYRAC | 1 cut(s) | 352 |
| HindII | GTYRAC | 1 cut(s) | 352 |
| HinfI | GANTC | 3 cut(s) | 297, 883, 916 |
| HphI | GGTGA | 5 cut(s) | 589, 646, 785, 823, 859 |
| Hpy166II | GTNNAC | 5 cut(s) | 28, 127, 352, 597, 673 |
| Hpy188I | TCNGA | 4 cut(s) | 49, 235, 888, 925 |
| Hpy188III | TCNNGA | 4 cut(s) | 124, 487, 604, 766 |
| Hpy8I | GTNNAC | 5 cut(s) | 28, 127, 352, 597, 673 |
| HpyAV | CCTTC | 3 cut(s) | 610, 883, 892 |
| HpyCH4III | ACNGT | 1 cut(s) | 824 |
| HpyCH4IV | ACGT | 3 cut(s) | 120, 348, 537 |
| HpyCH4V | TGCA | 5 cut(s) | 435, 640, 673, 724, 805 |
| HpyF3I | CTNAG | 2 cut(s) | 150, 924 |
| HpySE526I | ACGT | 3 cut(s) | 120, 348, 537 |
| Hsp92I | GRCGYC | 5 cut(s) | 120, 219, 339, 620, 698 |
| Hsp92II | CATG | 3 cut(s) | 178, 286, 580 |
| HspAI | GCGC | 7 cut(s) | 39, 168, 187, 207, 474, 620, 713 |
| KasI | GGCGCC | 1 cut(s) | 619 |
| Kpn2I | TCCGGA | 1 cut(s) | 486 |
| KroI | GCCGGC | 1 cut(s) | 700 |
| KroNI | GCCGGC | 1 cut(s) | 702 |
| KspI | CCGCGG | 1 cut(s) | 103 |
| Kzo9I | GATC | 4 cut(s) | 235, 483, 612, 628 |
| LmnI | GCTCC | 2 cut(s) | 102, 184 |
| Lsp1109I | GCAGC | 3 cut(s) | 661, 736, 839 |
| LweI | GCATC | 2 cut(s) | 627, 711 |
| MaeII | ACGT | 3 cut(s) | 120, 348, 537 |
| MaeIII | GTNAC | 4 cut(s) | 268, 773, 811, 824 |
| MalI | GATC | 4 cut(s) | 237, 485, 614, 630 |
| MbiI | CCGCTC | 1 cut(s) | 771 |
| MboI | GATC | 4 cut(s) | 235, 483, 612, 628 |
| MboII | GAAGA | 2 cut(s) | 619, 622 |
| MhlI | GDGCHC | 2 cut(s) | 306, 675 |
| MluCI | AATT | 2 cut(s) | 42, 406 |
| Mly113I | GGCGCC | 1 cut(s) | 620 |
| MreI | CGCCGGCG | 1 cut(s) | 700 |
| MroI | TCCGGA | 1 cut(s) | 486 |
| MroNI | GCCGGC | 1 cut(s) | 700 |
| MslI | CAYNNNNRTG | 1 cut(s) | 822 |
| MspA1I | CMGCKG | 3 cut(s) | 102, 652, 727 |
| MspR9I | CCNGG | 6 cut(s) | 182, 226, 413, 467, 779, 830 |
| MvaI | CCWGG | 1 cut(s) | 182 |
| MvnI | CGCG | 8 cut(s) | 23, 102, 189, 207, 476, 605, 617, 710 |
| NaeI | GCCGGC | 1 cut(s) | 702 |
| NarI | GGCGCC | 1 cut(s) | 620 |
| NciI | CCSGG | 5 cut(s) | 226, 413, 467, 779, 830 |
| NdeII | GATC | 4 cut(s) | 235, 483, 612, 628 |
| NgoMIV | GCCGGC | 1 cut(s) | 700 |
| NlaIII | CATG | 3 cut(s) | 178, 286, 580 |
| NlaIV | GGNNCC | 4 cut(s) | 417, 440, 508, 621 |
| NmeAIII | GCCGAG | 2 cut(s) | 157, 423 |
| NmuCI | GTSAC | 4 cut(s) | 268, 773, 811, 824 |
| NruI | TCGCGA | 1 cut(s) | 605 |
| OliI | CACNNNNGTG | 1 cut(s) | 822 |
| PaqCI | CACCTGC | 1 cut(s) | 149 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 129, 306, 348, 357, 543, 756 |
| PdiI | GCCGGC | 1 cut(s) | 702 |
| PfeI | GAWTC | 3 cut(s) | 297, 883, 916 |
| Pfl23II | CGTACG | 1 cut(s) | 624 |
| PfoI | TCCNGGA | 1 cut(s) | 465 |
| PluTI | GGCGCC | 1 cut(s) | 623 |
| PmaCI | CACGTG | 1 cut(s) | 538 |
| PmlI | CACGTG | 1 cut(s) | 538 |
| Ppu21I | YACGTR | 1 cut(s) | 538 |
| Psp6I | CCWGG | 1 cut(s) | 180 |
| PspCI | CACGTG | 1 cut(s) | 538 |
| PspEI | GGTNACC | 1 cut(s) | 773 |
| PspFI | CCCAGC | 2 cut(s) | 652, 727 |
| PspGI | CCWGG | 1 cut(s) | 180 |
| PspLI | CGTACG | 1 cut(s) | 624 |
| PspN4I | GGNNCC | 4 cut(s) | 417, 440, 508, 621 |
| PspPI | GGNCC | 4 cut(s) | 178, 316, 451, 543 |
| PvuII | CAGCTG | 2 cut(s) | 652, 727 |
| RruI | TCGCGA | 1 cut(s) | 605 |
| RsaI | GTAC | 2 cut(s) | 29, 626 |
| RsaNI | GTAC | 2 cut(s) | 28, 625 |
| RseI | CAYNNNNRTG | 1 cut(s) | 822 |
| Rsr2I | CGGWCCG | 1 cut(s) | 543 |
| RsrII | CGGWCCG | 1 cut(s) | 543 |
| SacII | CCGCGG | 1 cut(s) | 103 |
| SalI | GTCGAC | 1 cut(s) | 350 |
| Sau3AI | GATC | 4 cut(s) | 235, 483, 612, 628 |
| Sau96I | GGNCC | 4 cut(s) | 178, 316, 451, 543 |
| ScrFI | CCNGG | 6 cut(s) | 182, 226, 413, 467, 779, 830 |
| SduI | GDGCHC | 2 cut(s) | 306, 675 |
| SfaNI | GCATC | 2 cut(s) | 627, 711 |
| SfoI | GGCGCC | 1 cut(s) | 621 |
| Sfr303I | CCGCGG | 1 cut(s) | 103 |
| SgrAI | CRCCGGYG | 1 cut(s) | 700 |
| SgrBI | CCGCGG | 1 cut(s) | 103 |
| SgrDI | CGTCGACG | 1 cut(s) | 350 |
| SinI | GGWCC | 1 cut(s) | 543 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 822 |
| Sse9I | AATT | 2 cut(s) | 42, 406 |
| SspDI | GGCGCC | 1 cut(s) | 619 |
| StyD4I | CCNGG | 6 cut(s) | 180, 224, 411, 465, 777, 828 |
| StyI | CCWWGG | 1 cut(s) | 211 |
| TaaI | ACNGT | 1 cut(s) | 824 |
| TaiI | ACGT | 3 cut(s) | 123, 351, 540 |
| TaqI | TCGA | 5 cut(s) | 312, 327, 342, 351, 522 |
| TaqII | GACCGA | 1 cut(s) | 909 |
| TasI | AATT | 2 cut(s) | 42, 406 |
| TauI | GCSGC | 8 cut(s) | 105, 108, 219, 479, 535, 620, 683, 713 |
| TfiI | GAWTC | 3 cut(s) | 297, 883, 916 |
| TseFI | GTSAC | 4 cut(s) | 268, 773, 811, 824 |
| TseI | GCWGC | 3 cut(s) | 649, 724, 852 |
| Tsp45I | GTSAC | 4 cut(s) | 268, 773, 811, 824 |
| TspGWI | ACGGA | 3 cut(s) | 45, 61, 535 |
| VneI | GTGCAC | 1 cut(s) | 671 |
| VpaK11BI | GGWCC | 1 cut(s) | 543 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 446 |
| XmiI | GTMKAC | 1 cut(s) | 351 |
| ZraI | GACGTC | 1 cut(s) | 121 |