Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0005918

Physical Location & Seq

Genomic Coordinates Reverse (-)

26924139 .. 26927725

Gene Structure 3587 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1178300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGAACTGTTTGCGCAGTAGAAAATTGGACAAGTTAAAATGGAAGGTGGAGGGCCACAGGAGGAGCCCCAGATTATCTGCTTTGGAAGCATGTAAGGCTGATCAGCTGCCGAGGCTTGTGGGTGCGACTGGTCCTACTGCGACTGCTAATGCTGGTAGTCGTATTTGTACACAGCAGCGGTTGAAGAGCCAGGTGGGGAAGGATAAGGGACCTGCTTTCTGGACAAGGGACAGAAAGAAGAGAAAACTCAGACCTGTTGATGAGGGTCGAGTGGAAAATGGCGATGGTGGTCATCAAACGAGTACTGATCAACAGGTTGTGCAGGATAAAGATAGCCTAAAGCCTGGAGTTCATGCTGCCTCTACTGATCAACCATCGACTGAATCTGCAAAATGGTTGCCGGAAAAACGAATACTTGAGCTTATCCTTGACAAATTACAAAGGAAAGATACCTATGAGATATTTGCTGAACCAGTTGACCCGAATGAGGTTGAGGGTTACTATGAAATCATCGAAGAGCCTATGGATTTCGGGACCATGAGGGCTAAACTTCATGAAGGAATGTATAAGAATCTTGAACAATTTGAGCATGATGCATTCTTAATAACAGAAAATGCAATGCATTTTAATTCTACAGCTACCATTTATTTTAGACAGGCTCGTGCCATTCACGAACTAGCGAAGAAGGTATTTCATGTTTTGAAAACCTCTCCCAACAACTTTGAACTAGAATTCTCAGAAACAAGACAAAGAAGTGGTAGGAAAGCTCAAGGTGAAGCTGGCAGGAGAAGTCAAGTAAAGATTGGGTGTTCCAGTTACATTGATGCAAGAGAGCACAGAGTTCTTTCTGGTACTCACGATGGTAGAAGGTCTAGATCGTTCGAAGGAGATCCACGCAGCACATATAGACCTTGGACATCCTTCCTTGATGAGGATGAGTCGACAAGTCTGACAGTAATTAGTAAATTAAAACAACTTGAGCATGTGACTCATCAAGACATTGGTTACACTGAAAGCTTGATGTTATATGTTAAAGATTTAGGACCAACAGCTCAGAAGATTGCTAGAAAGAAGTTACTTGGATGTTCCGAAATGCATAAAAGTCAAGCTCCTTTGGCATCCACCTCTTCCCAATTGGCACCTAGTCCTCTGAGCAATGTGTTTACTTCACCACCAAGTCATAATTTCCAGGACAAACTTAATGAGCATCCTTCAACTACGAAAATCACTGGAAAAAAGGGATCTTTAGGTGATGAAATGGGCATCCAAGGTCCTACAGTTGGAGGGAAAGTCCAATGCAATGAAATTCATCCGAACTCTTCTTCCTTGAAATCTCATCATGCTGGACTTGCAGACAACAGTTGCTCAGTTTCCGGCTTCAAAAACACAGGCAGCAACTCGACACCAATGATACTGAACCAATGGAAGTCGGTTAATCAAGCACAACCCTTGAAGCAGCCTTCAGATTATAGTTCTCAGTCAAATTTCTTGGACCCAAGGTTGAGGAACAACATGGGATTTGCTAGTTTTAGCAAAACTAAGAACAAACTGAGTTCATTGCATTTGAGAGGAGATGATGATCAGACAAACTCTGAGGCAACCCAAGCGTCGAAACCCGACCAAGGTAGGCCAATGCTGGCTCAACAGTTCACATTTGATCTGCCATATTTGAGAGCCCAACTTGGTAGGATAAATTCTTCAGGACAAGATAGATTAAGCTTGCAGAAAGGTTCAGGTGCAGAGCTGATGGTCTTCCCAGCCGAGATAAAACTATCAGAGAGAGATGAGAAATCAGCAGCTTTATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

603

Amino Acids

67.22

Weight (kDa)

9.24

Isoelectric Point (pI)

42.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	142 - 221	1.5e-21	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005918)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g09360 FvH4_7g26330
malus_domestica	MD01G1172400.v1.1 MD04G1178300.v1.1 MD07G1238700.v1.1
prunus_persica	Prupe.2G267500_v2.0.a1 Prupe.6G298300_v2.0.a1
pyrus_communis	pycom01g18390 pycom07g21470
rosa_chinensis	RchiOBHm_Chr1g0372791 RchiOBHm_Chr3g0459751
rosa_laevigata	RLG00000025060 RLG00000026872
rosa_multiflora	Rmu_co8360863.1_g000001 Rmu_sc0000240.1_g000036 Rmu_ssc0000024.1_g000009
rosa_roxburghii	Rroxscaffold_6G00420000
rosa_rugosa	Rorug01G0374300 Rorug03G0038100
rosa_samantha	Rh1AG383100 Rh1BG346800 Rh1CG360100 Rh1DG377700 Rh3AG096600 Rh3BG099300 Rh3CG101200 Rh3DG100600
rosa_wichuraiana	Rw1G033730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	14
Acc36I	ACCTGC	1 cut(s)	220
AccB1I	GGYRCC	1 cut(s)	1138
AccI	GTMKAC	1 cut(s)	941
AciI	CCGC	1 cut(s)	178
AclWI	GGATC	2 cut(s)	884, 1249
AcsI	RAATTY	4 cut(s)	731, 1305, 1483, 1693
AcuI	CTGAAG	2 cut(s)	1446, 1683
AfaI	GTAC	3 cut(s)	169, 304, 853
AfiI	CCNNNNNNNGG	4 cut(s)	487, 931, 1280, 1622
AgsI	TTSAA	8 cut(s)	184, 578, 703, 725, 1215, 1330, 1381, 1453
AjnI	CCWGG	3 cut(s)	189, 343, 1188
AloI	GAACNNNNNNTCC	2 cut(s)	1307, 1339
Alw21I	GWGCWC	1 cut(s)	837
AlwI	GGATC	2 cut(s)	884, 1249
AoxI	GGCC	2 cut(s)	52, 1628
ApeKI	GCWGC	7 cut(s)	106, 175, 356, 897, 1392, 1456, 1796
ApoI	RAATTY	4 cut(s)	731, 1305, 1483, 1693
AspLEI	GCGC	1 cut(s)	15
AspS9I	GGNCC	7 cut(s)	52, 131, 209, 534, 1043, 1271, 1492
AsuHPI	GGTGA	3 cut(s)	785, 1161, 1262
AsuII	TTCGAA	1 cut(s)	882
AvaII	GGWCC	6 cut(s)	131, 209, 534, 1043, 1271, 1492
BanI	GGYRCC	1 cut(s)	1138
BanII	GRGCYC	2 cut(s)	68, 1678
BauI	CACGAG	1 cut(s)	660
BbsI	GAAGAC	1 cut(s)	1744
Bbv12I	GWGCWC	1 cut(s)	837
BbvI	GCAGC	6 cut(s)	93, 187, 343, 909, 1404, 1468
BccI	CCATC	4 cut(s)	278, 382, 854, 1741
BciT130I	CCWGG	3 cut(s)	191, 345, 1190
BclI	TGATCA	4 cut(s)	100, 307, 367, 1579
BfaI	CTAG	6 cut(s)	677, 728, 873, 1065, 1143, 1524
BfmI	CTRYAG	2 cut(s)	633, 1275
BfuAI	ACCTGC	1 cut(s)	220
BisI	GCNGC	7 cut(s)	107, 176, 357, 898, 1393, 1457, 1797
BlsI	GCNGC	7 cut(s)	108, 177, 358, 899, 1394, 1458, 1798
BmcAI	AGTACT	1 cut(s)	304
Bme1390I	CCNGG	3 cut(s)	191, 345, 1190
Bme18I	GGWCC	6 cut(s)	131, 209, 534, 1043, 1271, 1492
BmgT120I	GGNCC	7 cut(s)	52, 131, 209, 534, 1043, 1271, 1492
BmiI	GGNNCC	5 cut(s)	65, 210, 535, 1140, 1494
BmrFI	CCNGG	3 cut(s)	191, 345, 1190
BmsI	GCATC	5 cut(s)	583, 814, 1127, 1216, 1272
BpiI	GAAGAC	1 cut(s)	1744
BpmI	CTGGAG	1 cut(s)	366
Bpu14I	TTCGAA	1 cut(s)	882
BpuEI	CTTGAG	3 cut(s)	437, 753, 998
BsaBI	GATNNNNATC	1 cut(s)	1578
BsaJI	CCNNGG	5 cut(s)	110, 911, 1267, 1496, 1621
BsaXI	ACNNNNNCTCC	2 cut(s)	1275, 1305
Bsc4I	CCNNNNNNNGG	4 cut(s)	487, 931, 1280, 1622
Bse1I	ACTGG	4 cut(s)	133, 473, 813, 1234
Bse3DI	GCAATG	4 cut(s)	624, 1162, 1306, 1556
Bse8I	GATNNNNATC	1 cut(s)	1578
BseBI	CCWGG	3 cut(s)	191, 345, 1190
BseDI	CCNNGG	5 cut(s)	110, 911, 1267, 1496, 1621
BseGI	GGATG	7 cut(s)	917, 940, 1088, 1118, 1207, 1263, 1309
BseJI	GATNNNNATC	1 cut(s)	1578
BseLI	CCNNNNNNNGG	4 cut(s)	487, 931, 1280, 1622
BseMI	GCAATG	4 cut(s)	624, 1162, 1306, 1556
BseMII	CTCAG	8 cut(s)	262, 750, 1067, 1142, 1380, 1490, 1541, 1584
BseNI	ACTGG	4 cut(s)	133, 473, 813, 1234
BseRI	GAGGAG	2 cut(s)	76, 1584
BseXI	GCAGC	6 cut(s)	93, 187, 343, 909, 1404, 1468
BseYI	CCCAGC	1 cut(s)	1756
BsgI	GTGCAG	2 cut(s)	341, 1758
BshFI	GGCC	2 cut(s)	54, 1630
BshNI	GGYRCC	1 cut(s)	1138
BsiHKAI	GWGCWC	1 cut(s)	837
BsiSI	CCGG	2 cut(s)	401, 1374
BslFI	GGGAC	3 cut(s)	222, 242, 547
BslI	CCNNNNNNNGG	4 cut(s)	487, 931, 1280, 1622
BsmFI	GGGAC	3 cut(s)	222, 242, 547
BsmI	GAATGC	1 cut(s)	596
BsnI	GGCC	2 cut(s)	54, 1630
Bsp119I	TTCGAA	1 cut(s)	882
Bsp1286I	GDGCHC	3 cut(s)	68, 837, 1678
Bsp1407I	TGTACA	1 cut(s)	167
Bsp143I	GATC	8 cut(s)	100, 307, 367, 875, 889, 1241, 1579, 1657
BspACI	CCGC	1 cut(s)	178
BspANI	GGCC	2 cut(s)	54, 1630
BspCNI	CTCAG	8 cut(s)	261, 749, 1066, 1143, 1379, 1489, 1542, 1585
BspHI	TCATGA	1 cut(s)	553
BspLI	GGNNCC	5 cut(s)	65, 210, 535, 1140, 1494
BspMI	ACCTGC	1 cut(s)	220
BspPI	GGATC	2 cut(s)	884, 1249
BspQI	GCTCTTC	2 cut(s)	179, 510
BspT104I	TTCGAA	1 cut(s)	882
BspT107I	GGYRCC	1 cut(s)	1138
BsrDI	GCAATG	4 cut(s)	624, 1162, 1306, 1556
BsrGI	TGTACA	1 cut(s)	167
BsrI	ACTGG	4 cut(s)	133, 473, 813, 1234
BssECI	CCNNGG	5 cut(s)	110, 911, 1267, 1496, 1621
BssMI	GATC	8 cut(s)	100, 307, 367, 875, 889, 1241, 1579, 1657
BssSI	CACGAG	1 cut(s)	660
BssT1I	CCWWGG	4 cut(s)	911, 1267, 1496, 1621
Bst2BI	CACGAG	1 cut(s)	660
Bst2UI	CCWGG	3 cut(s)	191, 345, 1190
Bst4CI	ACNGT	5 cut(s)	8, 955, 1279, 1361, 1647
Bst6I	CTCTTC	5 cut(s)	179, 233, 510, 1132, 1324
BstAUI	TGTACA	1 cut(s)	167
BstBI	TTCGAA	1 cut(s)	882
BstC8I	GCNNGC	3 cut(s)	781, 1638, 1721
BstDEI	CTNAG	9 cut(s)	248, 736, 1053, 1151, 1366, 1476, 1539, 1550, 1593
BstENI	CCTNNNNNAGG	1 cut(s)	929
BstF5I	GGATG	7 cut(s)	917, 940, 1088, 1118, 1207, 1263, 1309
BstHHI	GCGC	1 cut(s)	15
BstKTI	GATC	8 cut(s)	103, 310, 370, 878, 892, 1244, 1582, 1660
BstMBI	GATC	8 cut(s)	100, 307, 367, 875, 889, 1241, 1579, 1657
BstMWI	GCNNNNNNNGC	6 cut(s)	86, 95, 112, 1115, 1349, 1604
BstNI	CCWGG	3 cut(s)	191, 345, 1190
BstNSI	RCATGY	2 cut(s)	93, 986
BstSCI	CCNGG	3 cut(s)	189, 343, 1188
BstSFI	CTRYAG	2 cut(s)	633, 1275
BstV1I	GCAGC	6 cut(s)	93, 187, 343, 909, 1404, 1468
BstV2I	GAAGAC	1 cut(s)	1744
BstX2I	RGATCY	2 cut(s)	889, 1241
BstYI	RGATCY	2 cut(s)	889, 1241
BsuRI	GGCC	2 cut(s)	54, 1630
BtgZI	GCGATG	1 cut(s)	297
BtsCI	GGATG	7 cut(s)	917, 940, 1088, 1118, 1207, 1263, 1309
BtsIMutI	CAGTG	2 cut(s)	1008, 1227
BveI	ACCTGC	1 cut(s)	220
Cac8I	GCNNGC	3 cut(s)	781, 1638, 1721
CciI	TCATGA	1 cut(s)	553
CfoI	GCGC	1 cut(s)	15
Cfr13I	GGNCC	7 cut(s)	52, 131, 209, 534, 1043, 1271, 1492
CseI	GACGC	1 cut(s)	1596
Csp6I	GTAC	3 cut(s)	168, 303, 852
CviAII	CATG	9 cut(s)	90, 353, 538, 554, 590, 695, 983, 1340, 1513
CviQI	GTAC	3 cut(s)	168, 303, 852
DdeI	CTNAG	9 cut(s)	248, 736, 1053, 1151, 1366, 1476, 1539, 1550, 1593
DpnI	GATC	8 cut(s)	102, 309, 369, 877, 891, 1243, 1581, 1659
DpnII	GATC	8 cut(s)	100, 307, 367, 875, 889, 1241, 1579, 1657
Eam1104I	CTCTTC	5 cut(s)	179, 233, 510, 1132, 1324
EarI	CTCTTC	5 cut(s)	179, 233, 510, 1132, 1324
Eco130I	CCWWGG	4 cut(s)	911, 1267, 1496, 1621
Eco24I	GRGCYC	2 cut(s)	68, 1678
Eco47I	GGWCC	6 cut(s)	131, 209, 534, 1043, 1271, 1492
Eco57I	CTGAAG	2 cut(s)	1446, 1683
EcoNI	CCTNNNNNAGG	1 cut(s)	929
EcoO109I	RGGNCCY	2 cut(s)	209, 1271
EcoRI	GAATTC	1 cut(s)	731
EcoRII	CCWGG	3 cut(s)	189, 343, 1188
EcoT14I	CCWWGG	4 cut(s)	911, 1267, 1496, 1621
EcoT22I	ATGCAT	3 cut(s)	598, 624, 1098
EcoT38I	GRGCYC	2 cut(s)	68, 1678
ErhI	CCWWGG	4 cut(s)	911, 1267, 1496, 1621
FaeI	CATG	9 cut(s)	93, 356, 541, 557, 593, 698, 986, 1343, 1516
FaqI	GGGAC	3 cut(s)	222, 242, 547
FatI	CATG	9 cut(s)	89, 352, 537, 553, 589, 694, 982, 1339, 1512
FbaI	TGATCA	4 cut(s)	100, 307, 367, 1579
FblI	GTMKAC	1 cut(s)	941
Fnu4HI	GCNGC	7 cut(s)	107, 176, 357, 898, 1393, 1457, 1797
FokI	GGATG	7 cut(s)	904, 947, 1095, 1105, 1194, 1250, 1296
FriOI	GRGCYC	2 cut(s)	68, 1678
Fsp4HI	GCNGC	7 cut(s)	107, 176, 357, 898, 1393, 1457, 1797
FspBI	CTAG	6 cut(s)	677, 728, 873, 1065, 1143, 1524
FspI	TGCGCA	1 cut(s)	14
GlaI	GCGC	1 cut(s)	14
GluI	GCNGC	7 cut(s)	107, 176, 357, 898, 1393, 1457, 1797
GsaI	CCCAGC	1 cut(s)	1760
GsuI	CTGGAG	1 cut(s)	366
HaeIII	GGCC	2 cut(s)	54, 1630
HapII	CCGG	2 cut(s)	401, 1374
HgaI	GACGC	1 cut(s)	1596
HhaI	GCGC	1 cut(s)	15
Hin1II	CATG	9 cut(s)	93, 356, 541, 557, 593, 698, 986, 1343, 1516
Hin6I	GCGC	1 cut(s)	13
HinP1I	GCGC	1 cut(s)	13
HincII	GTYRAC	2 cut(s)	478, 942
HindII	GTYRAC	2 cut(s)	478, 942
HindIII	AAGCTT	2 cut(s)	1015, 1717
HinfI	GANTC	4 cut(s)	383, 571, 938, 988
HpaII	CCGG	2 cut(s)	401, 1374
HphI	GGTGA	3 cut(s)	785, 1161, 1262
Hpy166II	GTNNAC	5 cut(s)	170, 478, 942, 1164, 1650
Hpy188III	TCNNGA	9 cut(s)	220, 532, 554, 575, 671, 857, 873, 995, 1701
Hpy8I	GTNNAC	5 cut(s)	170, 478, 942, 1164, 1650
Hpy99I	CGWCG	1 cut(s)	1612
HpyAV	CCTTC	9 cut(s)	37, 193, 551, 679, 861, 878, 931, 1221, 1470
HpyCH4III	ACNGT	5 cut(s)	8, 955, 1279, 1361, 1647
HpyF10VI	GCNNNNNNNGC	6 cut(s)	86, 95, 112, 1115, 1349, 1604
HpyF3I	CTNAG	9 cut(s)	248, 736, 1053, 1151, 1366, 1476, 1539, 1550, 1593
Hsp92II	CATG	9 cut(s)	93, 356, 541, 557, 593, 698, 986, 1343, 1516
HspAI	GCGC	1 cut(s)	13
Ksp22I	TGATCA	4 cut(s)	100, 307, 367, 1579
Kzo9I	GATC	8 cut(s)	100, 307, 367, 875, 889, 1241, 1579, 1657
LguI	GCTCTTC	2 cut(s)	179, 510
LmnI	GCTCC	2 cut(s)	63, 1114
Lsp1109I	GCAGC	6 cut(s)	93, 187, 343, 909, 1404, 1468
LweI	GCATC	5 cut(s)	583, 814, 1127, 1216, 1272
MaeI	CTAG	6 cut(s)	677, 728, 873, 1065, 1143, 1524
MaeIII	GTNAC	5 cut(s)	497, 815, 985, 1004, 1074
MalI	GATC	8 cut(s)	102, 309, 369, 877, 891, 1243, 1581, 1659
MboI	GATC	8 cut(s)	100, 307, 367, 875, 889, 1241, 1579, 1657
MfeI	CAATTG	1 cut(s)	1133
MflI	RGATCY	2 cut(s)	889, 1241
MhlI	GDGCHC	3 cut(s)	68, 837, 1678
MlyI	GAGTC	2 cut(s)	947, 982
MmeI	TCCRAC	1 cut(s)	1261
Mph1103I	ATGCAT	3 cut(s)	598, 624, 1098
MseI	TTAA	8 cut(s)	35, 602, 627, 968, 1032, 1200, 1434, 1715
MspA1I	CMGCKG	2 cut(s)	106, 178
MspI	CCGG	2 cut(s)	401, 1374
MspR9I	CCNGG	3 cut(s)	191, 345, 1190
MunI	CAATTG	1 cut(s)	1133
Mva1269I	GAATGC	1 cut(s)	596
MvaI	CCWGG	3 cut(s)	191, 345, 1190
MwoI	GCNNNNNNNGC	6 cut(s)	86, 95, 112, 1115, 1349, 1604
NdeII	GATC	8 cut(s)	100, 307, 367, 875, 889, 1241, 1579, 1657
NlaIII	CATG	9 cut(s)	93, 356, 541, 557, 593, 698, 986, 1343, 1516
NlaIV	GGNNCC	5 cut(s)	65, 210, 535, 1140, 1494
NmeAIII	GCCGAG	2 cut(s)	135, 1786
NmuCI	GTSAC	1 cut(s)	985
NsbI	TGCGCA	1 cut(s)	14
NsiI	ATGCAT	3 cut(s)	598, 624, 1098
NspI	RCATGY	2 cut(s)	93, 986
NspV	TTCGAA	1 cut(s)	882
PagI	TCATGA	1 cut(s)	553
PciSI	GCTCTTC	2 cut(s)	179, 510
PctI	GAATGC	1 cut(s)	596
PfeI	GAWTC	2 cut(s)	383, 571
PfoI	TCCNGGA	1 cut(s)	1188
PkrI	GCNGC	7 cut(s)	108, 177, 358, 899, 1394, 1458, 1798
PleI	GAGTC	2 cut(s)	946, 982
PpsI	GAGTC	2 cut(s)	946, 982
PpuMI	RGGWCCY	2 cut(s)	209, 1271
Psp5II	RGGWCCY	2 cut(s)	209, 1271
Psp6I	CCWGG	3 cut(s)	189, 343, 1188
PspFI	CCCAGC	1 cut(s)	1756
PspGI	CCWGG	3 cut(s)	189, 343, 1188
PspN4I	GGNNCC	5 cut(s)	65, 210, 535, 1140, 1494
PspPI	GGNCC	7 cut(s)	52, 131, 209, 534, 1043, 1271, 1492
PspPPI	RGGWCCY	2 cut(s)	209, 1271
PsuI	RGATCY	2 cut(s)	889, 1241
PvuII	CAGCTG	1 cut(s)	106
RsaI	GTAC	3 cut(s)	169, 304, 853
RsaNI	GTAC	3 cut(s)	168, 303, 852
SalI	GTCGAC	1 cut(s)	940
SapI	GCTCTTC	2 cut(s)	179, 510
SaqAI	TTAA	8 cut(s)	35, 602, 627, 968, 1032, 1200, 1434, 1715
SatI	GCNGC	7 cut(s)	107, 176, 357, 898, 1393, 1457, 1797
Sau3AI	GATC	8 cut(s)	100, 307, 367, 875, 889, 1241, 1579, 1657
Sau96I	GGNCC	7 cut(s)	52, 131, 209, 534, 1043, 1271, 1492
ScaI	AGTACT	1 cut(s)	304
SchI	GAGTC	2 cut(s)	947, 982
ScrFI	CCNGG	3 cut(s)	191, 345, 1190
SduI	GDGCHC	3 cut(s)	68, 837, 1678
SfaNI	GCATC	5 cut(s)	583, 814, 1127, 1216, 1272
SfcI	CTRYAG	2 cut(s)	633, 1275
SfuI	TTCGAA	1 cut(s)	882
SinI	GGWCC	6 cut(s)	131, 209, 534, 1043, 1271, 1492
SmlI	CTYRAG	3 cut(s)	416, 768, 977
SmoI	CTYRAG	3 cut(s)	416, 768, 977
SsiI	CCGC	1 cut(s)	178
SspMI	CTAG	6 cut(s)	677, 728, 873, 1065, 1143, 1524
StyD4I	CCNGG	3 cut(s)	189, 343, 1188
StyI	CCWWGG	4 cut(s)	911, 1267, 1496, 1621
TaaI	ACNGT	5 cut(s)	8, 955, 1279, 1361, 1647
TaqI	TCGA	7 cut(s)	268, 377, 513, 882, 941, 1400, 1610
TatI	WGTACW	2 cut(s)	167, 302
TfiI	GAWTC	2 cut(s)	383, 571
Tru1I	TTAA	8 cut(s)	35, 602, 627, 968, 1032, 1200, 1434, 1715
Tru9I	TTAA	8 cut(s)	35, 602, 627, 968, 1032, 1200, 1434, 1715
TscAI	CASTG	2 cut(s)	1015, 1234
TseFI	GTSAC	1 cut(s)	985
TseI	GCWGC	7 cut(s)	106, 175, 356, 897, 1392, 1456, 1796
Tsp45I	GTSAC	1 cut(s)	985
TspRI	CASTG	2 cut(s)	1015, 1234
VpaK11BI	GGWCC	6 cut(s)	131, 209, 534, 1043, 1271, 1492
XagI	CCTNNNNNAGG	1 cut(s)	929
XapI	RAATTY	4 cut(s)	731, 1305, 1483, 1693
XbaI	TCTAGA	1 cut(s)	872
XceI	RCATGY	2 cut(s)	93, 986
XmiI	GTMKAC	1 cut(s)	941
XspI	CTAG	6 cut(s)	677, 728, 873, 1065, 1143, 1524
ZrmI	AGTACT	1 cut(s)	304
Zsp2I	ATGCAT	3 cut(s)	598, 624, 1098

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.