Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0005918

Physical Location & Seq

Genomic Coordinates Forward (+)

8048486 .. 8052316

Gene Structure 3831 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG101200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGTCCAGATTTGGGAAGTCAAAGTTGTTGAGAGAGGGGTATAGGAAGAGCCCCAGGTTGTCTGCTTTGGAAGACTGGAAGGCTTGTGGCACTAGAATTGGAGCTATTGCTGGTAATACTAGCACACAGCAAATGAAGAGCTATTTGGGTTATGATCAAGGACCAGCTTCTAGGACAAGGGGTAGAAAGAAGAGCAGACTCACACCTTATGATGAAGCTGCCTACTCTTCTCGTTCAGCCTCACCAAATTTTGGTCCAGTAGAAACCAGTCAAGAAGATAACCAAACTAGTAGTGATCACCAGGTATTGTGGGGTAAAGATGTTCAAAAACCTGCCTCAACTGAAAAGCAGAAACTTGAGCTGGTTCTTGACATACTACAGAGGAGAGATACCAATGAAATATTTGCGGAGCCAGTTAACCCCAATGAGGTTCAGGATTATTATGAAATTATCGAAGAGCCTATGGATTTTGGGACCATGAGGGCTAAACTACATGAAGGAATGTATAAAAATCTTCAGCAATTTGAGCATGATGCATTTTTAGTAACAGAGAATGCAATGCATTTCAATTCCTCAGCTACCATTTATTTTAGACAGGCACGCTCCATACATGACTTAGCTAAGAAGGTATTTCACATTTTGAAAACCTATCCTGAGAAGTTGGAGTCAGAATTCTCAGAGGCTAGAAAAAGAACTGGTAGGAGGTCCCAAGTTGAAGTTGGAAAGTCACACTCATGTCCTAAAGTTGCTACAAATATGAAACACCTTGGCATGAAAATTGGTGGTTCATCAAAAGCTATGCGATCCTCGCTTAGTGGTTCATTAAATACCAGGAAATGTCTAGCAAAAACTGGATGCTCTGGTACTGATACACAAGAGCAGAAACTTCTTTCTGGGACTAAAGATGATGGAAGATCTATGTCTTTCGAAGCAGATCGACGCTACACATATCGACCTTGGAGATCCTTCCTCAGTGACAATGAGTCTATTGGTTTGACGTTATCCACTGATCTAAAACAACTTGAGCATGTAAATCGCCAGGATATTGGTTACAGAGAAAGCTTGATGTCATTTGTCAAAGATTTAGGACCAACAGCTAAGATGATTGCTAGAAAGAAGATACTTGGATGTCTCCAACTGCAAGAGAGTGACTTTCCTTTGGCATCTACTAGTACCCAACGAGCACCTACCACTACTGTTTTTGCTGCAGCACCCTCTCATGGCAGGCATCCTACAATCATGAAGACCATTCGCACTACATTTCAGCTGCTATCCAGTGGTGACCAAAATAATTCACATGCTGAATTTTATCCAAATCATAGGAATGAGATTCATCAGTTGGATTTTCATCCCTTGAAACCTCACAATGGATCAGACTGCAGTTGCATAGCTTCTGGGTTCCAAAACACCAGCAACAAGTCAACAGCAATGATACTAAACCAAGGGAAGTTGCCTAATCAATTACAGTCTTTGGTATCACCTTCAGAGTCTCAGTCTAATGTGTTGAGAAACCTGGAAATTGCAAGTCTTAGTAATGAGAGCTGCACATATAAATTGACTCCAGCGCCTTTGAGAGGAGATGATGATGAAACAAAAGCTACTCAAGGCCGAAGTCATGAATTTAGAAGCTTATCTCACACTAGCCAAATGCCAAAACCAGACCAAGTCAATCCAGTAGTGGCTCGACAGTTCGCATTCGATCTGCCATATTTGAGAGCTCAACTCGGTAAGATAAGTTCTTCTGGTCAGGATCGATTCTTGCATAATGGTTTAAGTGGTGAACTGAACTTTTCTGATAATATAGTTACCAGAGACACTCAATATTTACCTGCCATGAAGAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

614

Amino Acids

68.89

Weight (kDa)

9.25

Isoelectric Point (pI)

51.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	122 - 201	7.8e-21	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005918)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g09360 FvH4_7g26330
malus_domestica	MD01G1172400.v1.1 MD04G1178300.v1.1 MD07G1238700.v1.1
prunus_persica	Prupe.2G267500_v2.0.a1 Prupe.6G298300_v2.0.a1
pyrus_communis	pycom01g18390 pycom07g21470
rosa_chinensis	RchiOBHm_Chr1g0372791 RchiOBHm_Chr3g0459751
rosa_laevigata	RLG00000025060 RLG00000026872
rosa_multiflora	Rmu_co8360863.1_g000001 Rmu_sc0000240.1_g000036 Rmu_ssc0000024.1_g000009
rosa_roxburghii	Rroxscaffold_6G00420000
rosa_rugosa	Rorug01G0374300 Rorug03G0038100
rosa_samantha	Rh1AG383100 Rh1BG346800 Rh1CG360100 Rh1DG377700 Rh3AG096600 Rh3BG099300 Rh3CG101200 Rh3DG100600
rosa_wichuraiana	Rw1G033730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	340, 1837
AccB7I	CCANNNNNTGG	1 cut(s)	251
AciI	CCGC	1 cut(s)	407
AclWI	GGATC	4 cut(s)	798, 957, 1378, 1758
AcsI	RAATTY	4 cut(s)	247, 671, 1304, 1619
AcuI	CTGAAG	2 cut(s)	500, 1467
AfaI	GTAC	2 cut(s)	865, 1174
AfiI	CCNNNNNNNGG	6 cut(s)	12, 251, 427, 1220, 1367, 1574
AgsI	TTSAA	5 cut(s)	326, 568, 643, 716, 1357
AhdI	GACNNNNNGTC	1 cut(s)	982
AhlI	ACTAGT	2 cut(s)	287, 1169
AjnI	CCWGG	5 cut(s)	53, 300, 830, 1038, 1512
AjuI	GAANNNNNNNTTGG	2 cut(s)	128, 160
Alw21I	GWGCWC	2 cut(s)	1186, 1720
Alw26I	GTCTC	3 cut(s)	1136, 1494, 1806
AlwI	GGATC	4 cut(s)	798, 957, 1378, 1758
AoxI	GGCC	1 cut(s)	1606
ApeKI	GCWGC	5 cut(s)	218, 1205, 1208, 1267, 1542
ApoI	RAATTY	4 cut(s)	247, 671, 1304, 1619
AspLEI	GCGC	1 cut(s)	1567
AspS9I	GGNCC	5 cut(s)	161, 254, 474, 705, 1088
AsuHPI	GGTGA	5 cut(s)	234, 290, 1292, 1470, 1790
AsuII	TTCGAA	1 cut(s)	927
AvaII	GGWCC	5 cut(s)	161, 254, 474, 705, 1088
BanII	GRGCYC	2 cut(s)	53, 1720
BbsI	GAAGAC	2 cut(s)	78, 1250
Bbv12I	GWGCWC	2 cut(s)	1186, 1720
BbvCI	CCTCAGC	1 cut(s)	574
BbvI	GCAGC	5 cut(s)	205, 1192, 1220, 1254, 1529
BccI	CCATC	1 cut(s)	902
BcgI	CGANNNNNNTGC	2 cut(s)	1016, 1050
BciT130I	CCWGG	5 cut(s)	55, 302, 832, 1040, 1514
BclI	TGATCA	2 cut(s)	154, 295
BcoDI	GTCTC	3 cut(s)	1136, 1494, 1806
BcuI	ACTAGT	2 cut(s)	287, 1169
BfaI	CTAG	9 cut(s)	93, 120, 171, 288, 684, 842, 1110, 1170, 1641
BfmI	CTRYAG	3 cut(s)	377, 1206, 1378
BfoI	RGCGCY	1 cut(s)	1568
BfuAI	ACCTGC	2 cut(s)	340, 1837
BglII	AGATCT	1 cut(s)	914
BisI	GCNGC	5 cut(s)	219, 1206, 1209, 1268, 1543
BlsI	GCNGC	5 cut(s)	220, 1207, 1210, 1269, 1544
Bme1390I	CCNGG	5 cut(s)	55, 302, 832, 1040, 1514
Bme18I	GGWCC	5 cut(s)	161, 254, 474, 705, 1088
BmeRI	GACNNNNNGTC	1 cut(s)	982
BmgT120I	GGNCC	5 cut(s)	161, 254, 474, 705, 1088
BmiI	GGNNCC	4 cut(s)	411, 475, 707, 1400
BmrFI	CCNGG	5 cut(s)	55, 302, 832, 1040, 1514
BmsI	GCATC	4 cut(s)	523, 845, 1172, 1237
BpiI	GAAGAC	2 cut(s)	78, 1250
BplI	GAGNNNNNCTC	2 cut(s)	1707, 1739
BpmI	CTGGAG	1 cut(s)	1545
Bpu10I	CCTNAGC	1 cut(s)	574
Bpu14I	TTCGAA	1 cut(s)	927
BpuEI	CTTGAG	3 cut(s)	377, 1043, 1587
Bsa29I	ATCGAT	1 cut(s)	1753
BsaBI	GATNNNNATC	1 cut(s)	1347
BsaJI	CCNNGG	4 cut(s)	53, 766, 956, 1441
Bsc4I	CCNNNNNNNGG	6 cut(s)	12, 251, 427, 1220, 1367, 1574
Bse1I	ACTGG	8 cut(s)	80, 257, 267, 413, 700, 856, 1275, 1673
Bse3DI	GCAATG	2 cut(s)	564, 1434
Bse8I	GATNNNNATC	1 cut(s)	1347
BseBI	CCWGG	5 cut(s)	55, 302, 832, 1040, 1514
BseCI	ATCGAT	1 cut(s)	1753
BseDI	CCNNGG	4 cut(s)	53, 766, 956, 1441
BseGI	GGATG	4 cut(s)	860, 1133, 1228, 1348
BseJI	GATNNNNATC	1 cut(s)	1347
BseLI	CCNNNNNNNGG	6 cut(s)	12, 251, 427, 1220, 1367, 1574
BseMI	GCAATG	2 cut(s)	564, 1434
BseMII	CTCAG	5 cut(s)	588, 645, 690, 985, 1505
BseNI	ACTGG	8 cut(s)	80, 257, 267, 413, 700, 856, 1275, 1673
BseRI	GAGGAG	2 cut(s)	397, 1590
BseXI	GCAGC	5 cut(s)	205, 1192, 1220, 1254, 1529
BsgI	GTGCAG	1 cut(s)	1528
BshFI	GGCC	1 cut(s)	1608
BshVI	ATCGAT	1 cut(s)	1753
BsiHKAI	GWGCWC	2 cut(s)	1186, 1720
BslFI	GGGAC	3 cut(s)	487, 691, 910
BslI	CCNNNNNNNGG	6 cut(s)	12, 251, 427, 1220, 1367, 1574
BsmAI	GTCTC	3 cut(s)	1136, 1494, 1806
BsmFI	GGGAC	3 cut(s)	487, 691, 910
BsmI	GAATGC	2 cut(s)	559, 1694
BsnI	GGCC	1 cut(s)	1608
Bsp119I	TTCGAA	1 cut(s)	927
Bsp1286I	GDGCHC	3 cut(s)	53, 1186, 1720
BspACI	CCGC	1 cut(s)	407
BspANI	GGCC	1 cut(s)	1608
BspCNI	CTCAG	5 cut(s)	587, 646, 689, 984, 1504
BspDI	ATCGAT	1 cut(s)	1753
BspHI	TCATGA	2 cut(s)	1239, 1615
BspLI	GGNNCC	4 cut(s)	411, 475, 707, 1400
BspMAI	CTGCAG	2 cut(s)	1210, 1382
BspMI	ACCTGC	2 cut(s)	340, 1837
BspPI	GGATC	4 cut(s)	798, 957, 1378, 1758
BspQI	GCTCTTC	4 cut(s)	41, 131, 185, 450
BspT104I	TTCGAA	1 cut(s)	927
BsrDI	GCAATG	2 cut(s)	564, 1434
BsrI	ACTGG	8 cut(s)	80, 257, 267, 413, 700, 856, 1275, 1673
BssECI	CCNNGG	4 cut(s)	53, 766, 956, 1441
BssT1I	CCWWGG	3 cut(s)	766, 956, 1441
Bst2UI	CCWGG	5 cut(s)	55, 302, 832, 1040, 1514
Bst4CI	ACNGT	3 cut(s)	1198, 1467, 1689
Bst6I	CTCTTC	5 cut(s)	41, 131, 185, 232, 450
BstBI	TTCGAA	1 cut(s)	927
BstC8I	GCNNGC	2 cut(s)	601, 1226
BstEII	GGTNACC	1 cut(s)	1280
BstENI	CCTNNNNNAGG	1 cut(s)	1572
BstF5I	GGATG	4 cut(s)	860, 1133, 1228, 1348
BstH2I	RGCGCY	1 cut(s)	1568
BstHHI	GCGC	1 cut(s)	1567
BstMAI	GTCTC	3 cut(s)	1136, 1494, 1806
BstMWI	GCNNNNNNNGC	2 cut(s)	526, 808
BstNI	CCWGG	5 cut(s)	55, 302, 832, 1040, 1514
BstNSI	RCATGY	2 cut(s)	1031, 1301
BstPI	GGTNACC	1 cut(s)	1280
BstSCI	CCNGG	5 cut(s)	53, 300, 830, 1038, 1512
BstSFI	CTRYAG	3 cut(s)	377, 1206, 1378
BstV1I	GCAGC	5 cut(s)	205, 1192, 1220, 1254, 1529
BstV2I	GAAGAC	2 cut(s)	78, 1250
BstX2I	RGATCY	2 cut(s)	914, 962
BstXI	CCANNNNNNTGG	1 cut(s)	1046
BstYI	RGATCY	2 cut(s)	914, 962
Bsu15I	ATCGAT	1 cut(s)	1753
BsuRI	GGCC	1 cut(s)	1608
BsuTUI	ATCGAT	1 cut(s)	1753
BtsCI	GGATG	4 cut(s)	860, 1133, 1228, 1348
BtsIMutI	CAGTG	3 cut(s)	979, 1005, 1282
BveI	ACCTGC	2 cut(s)	340, 1837
Cac8I	GCNNGC	2 cut(s)	601, 1226
CciI	TCATGA	2 cut(s)	1239, 1615
CfoI	GCGC	1 cut(s)	1567
Cfr13I	GGNCC	5 cut(s)	161, 254, 474, 705, 1088
ClaI	ATCGAT	1 cut(s)	1753
CseI	GACGC	1 cut(s)	948
CsiI	ACCWGGT	1 cut(s)	300
Csp6I	GTAC	2 cut(s)	864, 1173
CviQI	GTAC	2 cut(s)	864, 1173
DriI	GACNNNNNGTC	1 cut(s)	982
Eam1104I	CTCTTC	5 cut(s)	41, 131, 185, 232, 450
Eam1105I	GACNNNNNGTC	1 cut(s)	982
EarI	CTCTTC	5 cut(s)	41, 131, 185, 232, 450
Ecl136II	GAGCTC	1 cut(s)	1718
Eco130I	CCWWGG	3 cut(s)	766, 956, 1441
Eco24I	GRGCYC	2 cut(s)	53, 1720
Eco47I	GGWCC	5 cut(s)	161, 254, 474, 705, 1088
Eco53kI	GAGCTC	1 cut(s)	1718
Eco57I	CTGAAG	2 cut(s)	500, 1467
Eco91I	GGTNACC	1 cut(s)	1280
EcoICRI	GAGCTC	1 cut(s)	1718
EcoNI	CCTNNNNNAGG	1 cut(s)	1572
EcoO109I	RGGNCCY	1 cut(s)	705
EcoO65I	GGTNACC	1 cut(s)	1280
EcoRI	GAATTC	1 cut(s)	671
EcoRII	CCWGG	5 cut(s)	53, 300, 830, 1038, 1512
EcoT14I	CCWWGG	3 cut(s)	766, 956, 1441
EcoT22I	ATGCAT	2 cut(s)	538, 564
EcoT38I	GRGCYC	2 cut(s)	53, 1720
ErhI	CCWWGG	3 cut(s)	766, 956, 1441
FaqI	GGGAC	3 cut(s)	487, 691, 910
FbaI	TGATCA	2 cut(s)	154, 295
Fnu4HI	GCNGC	5 cut(s)	219, 1206, 1209, 1268, 1543
FokI	GGATG	4 cut(s)	867, 1140, 1215, 1335
FriOI	GRGCYC	2 cut(s)	53, 1720
Fsp4HI	GCNGC	5 cut(s)	219, 1206, 1209, 1268, 1543
FspBI	CTAG	9 cut(s)	93, 120, 171, 288, 684, 842, 1110, 1170, 1641
GlaI	GCGC	1 cut(s)	1566
GluI	GCNGC	5 cut(s)	219, 1206, 1209, 1268, 1543
GsuI	CTGGAG	1 cut(s)	1545
HaeII	RGCGCY	1 cut(s)	1568
HaeIII	GGCC	1 cut(s)	1608
HgaI	GACGC	1 cut(s)	948
HhaI	GCGC	1 cut(s)	1567
Hin6I	GCGC	1 cut(s)	1565
HinP1I	GCGC	1 cut(s)	1565
HincII	GTYRAC	2 cut(s)	418, 1422
HindII	GTYRAC	2 cut(s)	418, 1422
HindIII	AAGCTT	2 cut(s)	1060, 1627
HinfI	GANTC	7 cut(s)	198, 665, 983, 1330, 1487, 1558, 1755
HpaI	GTTAAC	1 cut(s)	418
HphI	GGTGA	5 cut(s)	234, 290, 1292, 1470, 1790
Hpy166II	GTNNAC	3 cut(s)	418, 1422, 1781
Hpy188I	TCNGA	5 cut(s)	670, 679, 1375, 1486, 1795
Hpy188III	TCNNGA	8 cut(s)	6, 272, 368, 434, 653, 1240, 1616, 1748
Hpy8I	GTNNAC	3 cut(s)	418, 1422, 1781
Hpy99I	CGWCG	1 cut(s)	942
HpyAV	CCTTC	5 cut(s)	73, 491, 619, 976, 1491
HpyCH4III	ACNGT	3 cut(s)	1198, 1467, 1689
HpyCH4IV	ACGT	1 cut(s)	998
HpyF10VI	GCNNNNNNNGC	2 cut(s)	526, 808
HpySE526I	ACGT	1 cut(s)	998
HspAI	GCGC	1 cut(s)	1565
Ksp22I	TGATCA	2 cut(s)	154, 295
KspAI	GTTAAC	1 cut(s)	418
LguI	GCTCTTC	4 cut(s)	41, 131, 185, 450
LmnI	GCTCC	3 cut(s)	101, 409, 608
Lsp1109I	GCAGC	5 cut(s)	205, 1192, 1220, 1254, 1529
LweI	GCATC	4 cut(s)	523, 845, 1172, 1237
MabI	ACCWGGT	1 cut(s)	300
MaeI	CTAG	9 cut(s)	93, 120, 171, 288, 684, 842, 1110, 1170, 1641
MaeII	ACGT	1 cut(s)	998
MaeIII	GTNAC	7 cut(s)	544, 726, 974, 1049, 1148, 1280, 1804
MflI	RGATCY	2 cut(s)	914, 962
MhlI	GDGCHC	3 cut(s)	53, 1186, 1720
MlyI	GAGTC	5 cut(s)	192, 674, 992, 1496, 1552
MmeI	TCCRAC	4 cut(s)	642, 700, 1159, 1320
Mph1103I	ATGCAT	2 cut(s)	538, 564
MseI	TTAA	3 cut(s)	417, 824, 1772
MslI	CAYNNNNRTG	2 cut(s)	733, 1323
MspA1I	CMGCKG	1 cut(s)	1267
MspR9I	CCNGG	5 cut(s)	55, 302, 832, 1040, 1514
Mva1269I	GAATGC	2 cut(s)	559, 1694
MvaI	CCWGG	5 cut(s)	55, 302, 832, 1040, 1514
MwoI	GCNNNNNNNGC	2 cut(s)	526, 808
NlaIV	GGNNCC	4 cut(s)	411, 475, 707, 1400
NmuCI	GTSAC	4 cut(s)	726, 974, 1148, 1280
NsiI	ATGCAT	2 cut(s)	538, 564
NspI	RCATGY	2 cut(s)	1031, 1301
NspV	TTCGAA	1 cut(s)	927
PagI	TCATGA	2 cut(s)	1239, 1615
PciSI	GCTCTTC	4 cut(s)	41, 131, 185, 450
PctI	GAATGC	2 cut(s)	559, 1694
PfeI	GAWTC	2 cut(s)	1330, 1755
PflFI	GACNNNGTC	1 cut(s)	1664
PflMI	CCANNNNNTGG	1 cut(s)	251
PkrI	GCNGC	5 cut(s)	220, 1207, 1210, 1269, 1544
PleI	GAGTC	5 cut(s)	192, 673, 991, 1495, 1552
PpsI	GAGTC	5 cut(s)	192, 673, 991, 1495, 1552
PpuMI	RGGWCCY	1 cut(s)	705
Psp124BI	GAGCTC	1 cut(s)	1720
Psp5II	RGGWCCY	1 cut(s)	705
Psp6I	CCWGG	5 cut(s)	53, 300, 830, 1038, 1512
PspEI	GGTNACC	1 cut(s)	1280
PspGI	CCWGG	5 cut(s)	53, 300, 830, 1038, 1512
PspN4I	GGNNCC	4 cut(s)	411, 475, 707, 1400
PspPI	GGNCC	5 cut(s)	161, 254, 474, 705, 1088
PspPPI	RGGWCCY	1 cut(s)	705
PsrI	GAACNNNNNNTAC	2 cut(s)	1720, 1752
PstI	CTGCAG	2 cut(s)	1210, 1382
PsuI	RGATCY	2 cut(s)	914, 962
PsyI	GACNNNGTC	1 cut(s)	1664
PvuII	CAGCTG	1 cut(s)	1267
RsaI	GTAC	2 cut(s)	865, 1174
RsaNI	GTAC	2 cut(s)	864, 1173
RseI	CAYNNNNRTG	2 cut(s)	733, 1323
SacI	GAGCTC	1 cut(s)	1720
SapI	GCTCTTC	4 cut(s)	41, 131, 185, 450
SaqAI	TTAA	3 cut(s)	417, 824, 1772
SatI	GCNGC	5 cut(s)	219, 1206, 1209, 1268, 1543
Sau96I	GGNCC	5 cut(s)	161, 254, 474, 705, 1088
SchI	GAGTC	5 cut(s)	192, 674, 992, 1496, 1552
ScrFI	CCNGG	5 cut(s)	55, 302, 832, 1040, 1514
SduI	GDGCHC	3 cut(s)	53, 1186, 1720
SexAI	ACCWGGT	1 cut(s)	300
SfaNI	GCATC	4 cut(s)	523, 845, 1172, 1237
SfcI	CTRYAG	3 cut(s)	377, 1206, 1378
SfuI	TTCGAA	1 cut(s)	927
SinI	GGWCC	5 cut(s)	161, 254, 474, 705, 1088
SmiMI	CAYNNNNRTG	2 cut(s)	733, 1323
SmlI	CTYRAG	3 cut(s)	356, 1022, 1602
SmoI	CTYRAG	3 cut(s)	356, 1022, 1602
SpeI	ACTAGT	2 cut(s)	287, 1169
SsiI	CCGC	1 cut(s)	407
SspI	AATATT	2 cut(s)	402, 1823
SspMI	CTAG	9 cut(s)	93, 120, 171, 288, 684, 842, 1110, 1170, 1641
SstI	GAGCTC	1 cut(s)	1720
StyD4I	CCNGG	5 cut(s)	53, 300, 830, 1038, 1512
StyI	CCWWGG	3 cut(s)	766, 956, 1441
TaaI	ACNGT	3 cut(s)	1198, 1467, 1689
TaiI	ACGT	1 cut(s)	1001
TaqI	TCGA	7 cut(s)	453, 927, 937, 952, 1684, 1698, 1753
TfiI	GAWTC	2 cut(s)	1330, 1755
Tru1I	TTAA	3 cut(s)	417, 824, 1772
Tru9I	TTAA	3 cut(s)	417, 824, 1772
TscAI	CASTG	3 cut(s)	979, 1012, 1282
TseFI	GTSAC	4 cut(s)	726, 974, 1148, 1280
TseI	GCWGC	5 cut(s)	218, 1205, 1208, 1267, 1542
Tsp45I	GTSAC	4 cut(s)	726, 974, 1148, 1280
TspRI	CASTG	3 cut(s)	979, 1012, 1282
Tth111I	GACNNNGTC	1 cut(s)	1664
Van91I	CCANNNNNTGG	1 cut(s)	251
VpaK11BI	GGWCC	5 cut(s)	161, 254, 474, 705, 1088
XagI	CCTNNNNNAGG	1 cut(s)	1572
XapI	RAATTY	4 cut(s)	247, 671, 1304, 1619
XceI	RCATGY	2 cut(s)	1031, 1301
XcmI	CCANNNNNNNNNTGG	1 cut(s)	716
XspI	CTAG	9 cut(s)	93, 120, 171, 288, 684, 842, 1110, 1170, 1641
Zsp2I	ATGCAT	2 cut(s)	538, 564

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.