Prupe.6G298300_v2.0.a1

platelet degranulation

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
27208513 .. 27211791
3279 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G298300.1

Sequence Viewer

Length: 1767 bp
ATGCTTGTATTAGATCAACCATCCACTGAATCTTCACTGCAGTTGCCGGAAAAACGCATACTTGAGCTTATCCTTGACATATTACAGAGGAGAGATACCTATGAAATATTTGCGGAACCAGTTGACCCAAATGAGGTTGAGGGTTACTATGAAATCATCGAAGAGCCTATGGATTTTGGGACCATGAGGGCTAAACTTCATGAAGGAATGTATAGAAATCTTGAACAATTTGAGCATGATGCATTTCTAATAACAGAAAATGCAATGCATTTTAATTCTACAGCAACCATATTTTTTAGACAGGCTCGTGCCATACATGAGCTAACTAAGAAGGTATTTCATGTTTTGGAAACCTATCCTGAGAAATTTGAATTAGAATTCTCAGAGACAAGACAAAGAAGTGGTAGAAGGGCGCGAGGAGAAGCTGGGAGGTCAGCGTCTAGCTCATATCCTAAAATTGCTACAAACATGAAATCCCTTAGCATGAAGATAGCTGAATTTTCTAAAGCTATTCCATGCTCACTTAGTGGTTCATCAAATGTCAGAAGATGTCAAGTAAAGACAGGGTGCTCTGGCACTATTGATGCAAGAGAGCACAGAAATCTTTCTGGTACTCAAGATGATAGAAGATCTAGATCTTTTGAAGCAGATCCACGCTGTACATATAGACCTTGGACATCGTACCTCGATGAGAATGAGTCAACTGGTTTGACACTATCTAGTAATTTAAAACAACTTGAGCATGCTAATCAGCAGGATATTGGTTACACCGAAAGCTTGATGTTGTTTGTTAAAGACTTGGGACCAACAGCTCAGAAGATTGCCAGAAAGAAGTTACTTGGATCTTTCCAGTTGCAAAAAAGTCAAATTCCTTTGGCATCTACCTTTACCCAATGGGCACCTAGTACTCTGAATGATATATTTGCTTCATCACAATCTCAAAACTTCCAGGGCAACCTTCATGGGCATCCTTCTATCAAGAAGAGCACTGGTGACAGTTTCCATTCATGGGATGCTGATAAAAGAGGAAAGGGATCTTTAGGTGATGAAATTGGCATCCAAAGTGGCAAAGTTGCAGTGGCATCCAGTAGTGACAGACAGAACTCACATGGTACTTTTGGAGGGAAAATTCAGTCCAGTGAATTTCATCAGAACAGAAGAAATGAGATTCAGTTGGATTCTTATTCCTTGAAAACTCATGCTGCAGACAACAGTTGCTCAGTTTCTGGGTTCAAAAACATTGGCAGCAACTCAACACCACTGATACTGAACCAATGGAAGTCGGTTAATCGAGCACAATCATTGGAGCCACCCCAATGGAAGTCGGTTAATCAAACACAATCACTGGAGCCACCTTCAGATTCTTCTCAGTCAAATTTGTTGGAACCAAGGTTGAGAAACTTGGGATTTTCAAGTTTTAGTCGAACTAAGAACAAATTGAGTTCGTTTAATTCGAGAGAAGATTGCGATCAAACCAAAGCTGAGACAAGCCAAGTGTCAAAAACAGACCAAGCCAGGCCACCGGTTCGCCAGTTCACATTTGATCTGCCATATTTGAGAGCCCAACTTGGTAAGATAAATTCTTCGGGACAAGATAGATTCTTGCAGAAAGGTTCAGGTGCTGAGCTGATCTTGCCTGATAAAAATAGTCATCAGAGAGCTTCAACCTGTACCCGCCATTTGGAGATGAGAAATCAGCCTCATAGTGATTATCAAAACCAGCCTTCAATGGATACTCAGTACACTGATTTAGCTCTTCAGCTGTAA

Protein Analysis

589

Amino Acids

66.29

Weight (kDa)

8.31

Isoelectric Point (pI)

48.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 898
AccII CGCG 1 cut(s) 415
AciI CCGC 2 cut(s) 113, 1675
AclWI GGATC 3 cut(s) 644, 850, 1042
AcsI RAATTY 8 cut(s) 365, 377, 497, 867, 1128, 1142, 1375, 1579
AcuI CTGAAG 2 cut(s) 1341, 1742
AdeI CACNNNGTG 1 cut(s) 527
AfaI GTAC 7 cut(s) 613, 661, 683, 907, 1114, 1672, 1742
AfiI CCNNNNNNNGG 3 cut(s) 133, 1009, 1681
AgeI ACCGGT 1 cut(s) 1522
AgsI TTSAA 8 cut(s) 224, 371, 644, 1192, 1234, 1413, 1665, 1728
AjnI CCWGG 2 cut(s) 948, 1514
Alw21I GWGCWC 4 cut(s) 572, 597, 989, 1297
Alw26I GTCTC 2 cut(s) 380, 1478
AlwI GGATC 3 cut(s) 644, 850, 1042
AlwNI CAGNNNCTG 2 cut(s) 1226, 1622
AoxI GGCC 1 cut(s) 1517
ApeKI GCWGC 2 cut(s) 1202, 1245
ApoI RAATTY 8 cut(s) 365, 377, 497, 867, 1128, 1142, 1375, 1579
AsiGI ACCGGT 1 cut(s) 1522
Asp700I GAANNNNTTC 1 cut(s) 604
AspLEI GCGC 1 cut(s) 415
AspS9I GGNCC 2 cut(s) 180, 803
AsuHPI GGTGA 2 cut(s) 1004, 1055
AvaII GGWCC 2 cut(s) 180, 803
BaeGI GKGCMC 1 cut(s) 901
BanI GGYRCC 1 cut(s) 898
BanII GRGCYC 1 cut(s) 1564
BauI CACGAG 1 cut(s) 306
Bbv12I GWGCWC 4 cut(s) 572, 597, 989, 1297
BbvI GCAGC 2 cut(s) 1189, 1257
BccI CCATC 1 cut(s) 28
BciT130I CCWGG 2 cut(s) 950, 1516
BciVI GTATCC 1 cut(s) 1726
BcoDI GTCTC 2 cut(s) 380, 1478
BfaI CTAG 4 cut(s) 441, 633, 720, 903
BfmI CTRYAG 3 cut(s) 38, 279, 1203
BfuI GTATCC 1 cut(s) 1726
BglII AGATCT 2 cut(s) 629, 635
BisI GCNGC 2 cut(s) 1203, 1246
BlpI GCTNAGC 1 cut(s) 1623
BlsI GCNGC 2 cut(s) 1204, 1247
BmcAI AGTACT 1 cut(s) 907
Bme1390I CCNGG 2 cut(s) 950, 1516
Bme18I GGWCC 2 cut(s) 180, 803
BmgT120I GGNCC 2 cut(s) 180, 803
BmiI GGNNCC 7 cut(s) 117, 181, 804, 900, 1308, 1350, 1386
BmrFI CCNGG 2 cut(s) 950, 1516
BmsI GCATC 7 cut(s) 229, 574, 887, 976, 1003, 1065, 1091
BpmI CTGGAG 1 cut(s) 1367
Bpu10I CCTNAGC 1 cut(s) 479
Bpu1102I GCTNAGC 1 cut(s) 1623
BpuEI CTTGAG 3 cut(s) 83, 600, 758
BsaBI GATNNNNATC 2 cut(s) 634, 1467
BsaJI CCNNGG 3 cut(s) 671, 949, 1388
BsaWI WCCGGW 1 cut(s) 1522
Bsc4I CCNNNNNNNGG 3 cut(s) 133, 1009, 1681
Bse118I RCCGGY 1 cut(s) 1522
Bse1I ACTGG 8 cut(s) 119, 709, 850, 994, 1086, 1137, 1350, 1531
Bse3DI GCAATG 1 cut(s) 270
Bse8I GATNNNNATC 2 cut(s) 634, 1467
BseBI CCWGG 2 cut(s) 950, 1516
BseDI CCNNGG 3 cut(s) 671, 949, 1388
BseGI GGATG 5 cut(s) 20, 967, 1018, 1056, 1082
BseJI GATNNNNATC 2 cut(s) 634, 1467
BseLI CCNNNNNNNGG 3 cut(s) 133, 1009, 1681
BseMI GCAATG 1 cut(s) 270
BseMII CTCAG 8 cut(s) 351, 396, 827, 1233, 1382, 1473, 1614, 1751
BseNI ACTGG 8 cut(s) 119, 709, 850, 994, 1086, 1137, 1350, 1531
BseRI GAGGAG 2 cut(s) 103, 432
BseSI GKGCMC 1 cut(s) 901
BseXI GCAGC 2 cut(s) 1189, 1257
BseYI CCCAGC 1 cut(s) 425
Bsh1236I CGCG 1 cut(s) 415
BshFI GGCC 1 cut(s) 1519
BshNI GGYRCC 1 cut(s) 898
BshTI ACCGGT 1 cut(s) 1522
BsiHKAI GWGCWC 4 cut(s) 572, 597, 989, 1297
BsiSI CCGG 2 cut(s) 47, 1523
BslFI GGGAC 3 cut(s) 193, 816, 1602
BslI CCNNNNNNNGG 3 cut(s) 133, 1009, 1681
BsmAI GTCTC 2 cut(s) 380, 1478
BsmFI GGGAC 3 cut(s) 193, 816, 1602
BsnI GGCC 1 cut(s) 1519
Bsp1286I GDGCHC 6 cut(s) 572, 597, 901, 989, 1297, 1564
Bsp1407I TGTACA 1 cut(s) 659
Bsp143I GATC 9 cut(s) 13, 629, 635, 649, 842, 1034, 1468, 1543, 1629
Bsp1720I GCTNAGC 1 cut(s) 1623
BspACI CCGC 2 cut(s) 113, 1675
BspANI GGCC 1 cut(s) 1519
BspCNI CTCAG 8 cut(s) 352, 395, 826, 1232, 1381, 1474, 1615, 1750
BspFNI CGCG 1 cut(s) 415
BspHI TCATGA 1 cut(s) 199
BspLI GGNNCC 7 cut(s) 117, 181, 804, 900, 1308, 1350, 1386
BspMAI CTGCAG 2 cut(s) 42, 1207
BspPI GGATC 3 cut(s) 644, 850, 1042
BspQI GCTCTTC 3 cut(s) 156, 977, 1761
BspT107I GGYRCC 1 cut(s) 898
BsrDI GCAATG 1 cut(s) 270
BsrFI RCCGGY 1 cut(s) 1522
BsrGI TGTACA 1 cut(s) 659
BsrI ACTGG 8 cut(s) 119, 709, 850, 994, 1086, 1137, 1350, 1531
BssAI RCCGGY 1 cut(s) 1522
BssECI CCNNGG 3 cut(s) 671, 949, 1388
BssMI GATC 9 cut(s) 13, 629, 635, 649, 842, 1034, 1468, 1543, 1629
BssSI CACGAG 1 cut(s) 306
BssT1I CCWWGG 2 cut(s) 671, 1388
Bst2BI CACGAG 1 cut(s) 306
Bst2UI CCWGG 2 cut(s) 950, 1516
Bst4CI ACNGT 2 cut(s) 998, 1214
Bst6I CTCTTC 3 cut(s) 156, 977, 1761
BstAUI TGTACA 1 cut(s) 659
BstC8I GCNNGC 1 cut(s) 744
BstF5I GGATG 5 cut(s) 20, 967, 1018, 1056, 1082
BstFNI CGCG 1 cut(s) 415
BstHHI GCGC 1 cut(s) 415
BstKTI GATC 9 cut(s) 16, 632, 638, 652, 845, 1037, 1471, 1546, 1632
BstMAI GTCTC 2 cut(s) 380, 1478
BstMBI GATC 9 cut(s) 13, 629, 635, 649, 842, 1034, 1468, 1543, 1629
BstMWI GCNNNNNNNGC 1 cut(s) 1633
BstNI CCWGG 2 cut(s) 950, 1516
BstNSI RCATGY 1 cut(s) 746
BstSCI CCNGG 2 cut(s) 948, 1514
BstSFI CTRYAG 3 cut(s) 38, 279, 1203
BstSLI GKGCMC 1 cut(s) 901
BstUI CGCG 1 cut(s) 415
BstV1I GCAGC 2 cut(s) 1189, 1257
BstX2I RGATCY 5 cut(s) 629, 635, 649, 842, 1034
BstXI CCANNNNNNTGG 1 cut(s) 1317
BstYI RGATCY 5 cut(s) 629, 635, 649, 842, 1034
BsuI GTATCC 1 cut(s) 1726
BsuRI GGCC 1 cut(s) 1519
BtsCI GGATG 5 cut(s) 20, 967, 1018, 1056, 1082
BtsI GCAGTG 2 cut(s) 35, 1083
BtsIMutI CAGTG 8 cut(s) 24, 35, 987, 1083, 1144, 1259, 1343, 1743
Cac8I GCNNGC 1 cut(s) 744
CaiI CAGNNNCTG 2 cut(s) 1226, 1622
CciI TCATGA 1 cut(s) 199
CfoI GCGC 1 cut(s) 415
Cfr10I RCCGGY 1 cut(s) 1522
Cfr13I GGNCC 2 cut(s) 180, 803
CseI GACGC 1 cut(s) 426
Csp6I GTAC 7 cut(s) 612, 660, 682, 906, 1113, 1671, 1741
CspAI ACCGGT 1 cut(s) 1522
CviQI GTAC 7 cut(s) 612, 660, 682, 906, 1113, 1671, 1741
DpnI GATC 9 cut(s) 15, 631, 637, 651, 844, 1036, 1470, 1545, 1631
DpnII GATC 9 cut(s) 13, 629, 635, 649, 842, 1034, 1468, 1543, 1629
DraI TTTAAA 1 cut(s) 729
DraIII CACNNNGTG 1 cut(s) 527
Eam1104I CTCTTC 3 cut(s) 156, 977, 1761
EarI CTCTTC 3 cut(s) 156, 977, 1761
Eco130I CCWWGG 2 cut(s) 671, 1388
Eco24I GRGCYC 1 cut(s) 1564
Eco47I GGWCC 2 cut(s) 180, 803
Eco57I CTGAAG 2 cut(s) 1341, 1742
EcoRI GAATTC 1 cut(s) 377
EcoRII CCWGG 2 cut(s) 948, 1514
EcoT14I CCWWGG 2 cut(s) 671, 1388
EcoT22I ATGCAT 2 cut(s) 244, 270
EcoT38I GRGCYC 1 cut(s) 1564
ErhI CCWWGG 2 cut(s) 671, 1388
FaqI GGGAC 3 cut(s) 193, 816, 1602
FauI CCCGC 1 cut(s) 1682
Fnu4HI GCNGC 2 cut(s) 1203, 1246
FokI GGATG 5 cut(s) 7, 954, 1025, 1043, 1069
FriOI GRGCYC 1 cut(s) 1564
Fsp4HI GCNGC 2 cut(s) 1203, 1246
FspBI CTAG 4 cut(s) 441, 633, 720, 903
GlaI GCGC 1 cut(s) 414
GluI GCNGC 2 cut(s) 1203, 1246
GsaI CCCAGC 1 cut(s) 429
GsuI CTGGAG 1 cut(s) 1367
HaeIII GGCC 1 cut(s) 1519
HapII CCGG 2 cut(s) 47, 1523
HgaI GACGC 1 cut(s) 426
HhaI GCGC 1 cut(s) 415
Hin6I GCGC 1 cut(s) 413
HinP1I GCGC 1 cut(s) 413
HincII GTYRAC 2 cut(s) 124, 702
HindII GTYRAC 2 cut(s) 124, 702
HindIII AAGCTT 1 cut(s) 775
HinfI GANTC 6 cut(s) 29, 698, 1168, 1178, 1361, 1599
HpaII CCGG 2 cut(s) 47, 1523
HphI GGTGA 2 cut(s) 1004, 1055
Hpy166II GTNNAC 4 cut(s) 124, 702, 1536, 1743
Hpy188I TCNGA 7 cut(s) 385, 545, 816, 912, 1152, 1360, 1656
Hpy188III TCNNGA 8 cut(s) 200, 221, 359, 617, 633, 979, 1455, 1587
Hpy8I GTNNAC 4 cut(s) 124, 702, 1536, 1743
HpyAV CCTTC 7 cut(s) 197, 325, 402, 968, 981, 1365, 1734
HpyCH4III ACNGT 2 cut(s) 998, 1214
HpyCH4V TGCA 9 cut(s) 40, 242, 263, 268, 587, 856, 1076, 1205, 1606
HpyF10VI GCNNNNNNNGC 1 cut(s) 1633
HspAI GCGC 1 cut(s) 413
Kzo9I GATC 9 cut(s) 13, 629, 635, 649, 842, 1034, 1468, 1543, 1629
LguI GCTCTTC 3 cut(s) 156, 977, 1761
LmnI GCTCC 2 cut(s) 1306, 1348
Lsp1109I GCAGC 2 cut(s) 1189, 1257
LweI GCATC 7 cut(s) 229, 574, 887, 976, 1003, 1065, 1091
MaeI CTAG 4 cut(s) 441, 633, 720, 903
MaeIII GTNAC 5 cut(s) 143, 764, 834, 992, 1091
MalI GATC 9 cut(s) 15, 631, 637, 651, 844, 1036, 1470, 1545, 1631
MboI GATC 9 cut(s) 13, 629, 635, 649, 842, 1034, 1468, 1543, 1629
MflI RGATCY 5 cut(s) 629, 635, 649, 842, 1034
MhlI GDGCHC 6 cut(s) 572, 597, 901, 989, 1297, 1564
MlyI GAGTC 1 cut(s) 707
MmeI TCCRAC 2 cut(s) 1155, 1362
Mph1103I ATGCAT 2 cut(s) 244, 270
MroXI GAANNNNTTC 1 cut(s) 604
MseI TTAA 6 cut(s) 273, 728, 792, 1287, 1329, 1449
MslI CAYNNNNRTG 1 cut(s) 1315
MspA1I CMGCKG 1 cut(s) 1762
MspI CCGG 2 cut(s) 47, 1523
MspR9I CCNGG 2 cut(s) 950, 1516
MvaI CCWGG 2 cut(s) 950, 1516
MvnI CGCG 1 cut(s) 415
MwoI GCNNNNNNNGC 1 cut(s) 1633
NdeII GATC 9 cut(s) 13, 629, 635, 649, 842, 1034, 1468, 1543, 1629
NlaIV GGNNCC 7 cut(s) 117, 181, 804, 900, 1308, 1350, 1386
NmuCI GTSAC 2 cut(s) 992, 1091
NsiI ATGCAT 2 cut(s) 244, 270
NspI RCATGY 1 cut(s) 746
PaeI GCATGC 1 cut(s) 746
PagI TCATGA 1 cut(s) 199
PciSI GCTCTTC 3 cut(s) 156, 977, 1761
PcsI WCGNNNNNNNCGW 1 cut(s) 1451
PdmI GAANNNNTTC 1 cut(s) 604
PfeI GAWTC 5 cut(s) 29, 1168, 1178, 1361, 1599
PinAI ACCGGT 1 cut(s) 1522
PkrI GCNGC 2 cut(s) 1204, 1247
PleI GAGTC 1 cut(s) 706
PpsI GAGTC 1 cut(s) 706
Psp6I CCWGG 2 cut(s) 948, 1514
PspFI CCCAGC 1 cut(s) 425
PspGI CCWGG 2 cut(s) 948, 1514
PspN4I GGNNCC 7 cut(s) 117, 181, 804, 900, 1308, 1350, 1386
PspPI GGNCC 2 cut(s) 180, 803
PstI CTGCAG 2 cut(s) 42, 1207
PstNI CAGNNNCTG 2 cut(s) 1226, 1622
PsuI RGATCY 5 cut(s) 629, 635, 649, 842, 1034
PvuII CAGCTG 1 cut(s) 1762
RsaI GTAC 7 cut(s) 613, 661, 683, 907, 1114, 1672, 1742
RsaNI GTAC 7 cut(s) 612, 660, 682, 906, 1113, 1671, 1741
RseI CAYNNNNRTG 1 cut(s) 1315
SapI GCTCTTC 3 cut(s) 156, 977, 1761
SaqAI TTAA 6 cut(s) 273, 728, 792, 1287, 1329, 1449
SatI GCNGC 2 cut(s) 1203, 1246
Sau3AI GATC 9 cut(s) 13, 629, 635, 649, 842, 1034, 1468, 1543, 1629
Sau96I GGNCC 2 cut(s) 180, 803
ScaI AGTACT 1 cut(s) 907
SchI GAGTC 1 cut(s) 707
ScrFI CCNGG 2 cut(s) 950, 1516
SduI GDGCHC 6 cut(s) 572, 597, 901, 989, 1297, 1564
SfaNI GCATC 7 cut(s) 229, 574, 887, 976, 1003, 1065, 1091
SfcI CTRYAG 3 cut(s) 38, 279, 1203
SinI GGWCC 2 cut(s) 180, 803
SmiMI CAYNNNNRTG 1 cut(s) 1315
SmlI CTYRAG 3 cut(s) 62, 615, 737
SmoI CTYRAG 3 cut(s) 62, 615, 737
SphI GCATGC 1 cut(s) 746
SsiI CCGC 2 cut(s) 113, 1675
SspI AATATT 1 cut(s) 108
SspMI CTAG 4 cut(s) 441, 633, 720, 903
StyD4I CCNGG 2 cut(s) 948, 1514
StyI CCWWGG 2 cut(s) 671, 1388
TaaI ACNGT 2 cut(s) 998, 1214
TaqI TCGA 5 cut(s) 159, 687, 1291, 1423, 1454
TatI WGTACW 3 cut(s) 659, 905, 1740
TfiI GAWTC 5 cut(s) 29, 1168, 1178, 1361, 1599
Tru1I TTAA 6 cut(s) 273, 728, 792, 1287, 1329, 1449
Tru9I TTAA 6 cut(s) 273, 728, 792, 1287, 1329, 1449
TscAI CASTG 8 cut(s) 31, 42, 994, 1083, 1144, 1266, 1350, 1750
TseFI GTSAC 2 cut(s) 992, 1091
TseI GCWGC 2 cut(s) 1202, 1245
Tsp45I GTSAC 2 cut(s) 992, 1091
TspRI CASTG 8 cut(s) 31, 42, 994, 1083, 1144, 1266, 1350, 1750
VpaK11BI GGWCC 2 cut(s) 180, 803
XapI RAATTY 8 cut(s) 365, 377, 497, 867, 1128, 1142, 1375, 1579
XbaI TCTAGA 1 cut(s) 632
XceI RCATGY 1 cut(s) 746
XmnI GAANNNNTTC 1 cut(s) 604
XspI CTAG 4 cut(s) 441, 633, 720, 903
ZrmI AGTACT 1 cut(s) 907
Zsp2I ATGCAT 2 cut(s) 244, 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.