Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0005918

Physical Location & Seq

Genomic Coordinates Reverse (-)

41661504 .. 41665319

Gene Structure 3816 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025060

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

ATGTCCAGTAAAAGATTTGGGAAGTCAAAGTTGTTGAGAGAGGGGTATAGGAAGAGCCCCAGATTGTCTGCTTTGGAAGACTGGAAGCCTTGTGGCACTAGAATTGGTGCTATTGCTGGTAATACTAGCACACAGCAAATGAAGAGCGGTCATGATCAAGGACCAGCTTCTAGGACAAGGGGTAGAAAGAAGAGAAGACTCACACCTTATGATGAAGCTGCCTACCCTTCTCGTTCAGCCTCACCAAATTTTGGTCCAGTGGAAACCAGTCAAGAAGATAACCAAACTAGTAGTGATCACCAGGTATTGTGGGGTAAAGATATTCGAAAACCTGCCTCAACTGATCAACAATCCTCTGCTCTATCTGCATTATGGTTGCCAGAAAAGCACAAACTTGAGCTGGTTCTTGACATACTACAGAGGAGAGATACCAATGAAATATTTGCGGAGCCAGTTAACCCCAATGAGGTTCAGGATTATTATGAAATTATTGAAGAGCCTATGGATTTTGGCACCATGAGGGCTAAACTACATGAAGGAATGTATAAAAATCTTCAGCAATTTGAGAATGCAATGCATTTCAATTCCTCAGCTACCATTTATTTTAGACAGGCACGCTCCATGCATGACTTAGCTAAGAAGGTATTTCACATTATGAAAACCTATCCTGAGAAGTTGGAGTCAGAATTCTCAGAGGTTAGACAAAGAACTGGTAGGAGGTCCCAAGTTGAAGTTGGAAAGCCACACTCATGTCCTAAAGTTGCTACAAAAATGAAACCCCTTGGCTTGAAAATTGGTGGTTCATCAAAAGCTATGCGATCCTCACTTAGTGGTTCATTACATACCAGGAAATGTCTAGCAAAAACTGGACGCTCTGGTACTGATACACAAGAGCAGAAACTTCTTTCTGGGACTAAAGAAGATGGAAGATCTATGTCTTTCGAAGCAGATCGATGCTACACATATCGACCTTGGAGATCCTTCCTCAGTGAGAATGAGTCTATTGGTTTGACATTATCCAGTGATATAAAACAACTTGAGCATGTAAATCGCCAGGATATTGGTTACAGAGAAAGCTTGATGTCATTTGTCAAAGATTTAGGACCAACAGCTAAGATGATTGCTAGAAAGAAGATACTTGGATGTCTCCAACTGCAAGAAAGTGACTTTCCTTTGGCATCTACTAGTACCCAACGAGCACCTAGCACTACTGCTTTTGCTGCAGCACCCTCTCATGGCAGGCATCCTACAATCATGAAGACCACTCGCACTACATTTCAGCTGCCATCCAGTGGTGACCAAAATAATTCACAAGTTGAATTTTATCCAAATCATAGGAATGAGATTCGTCAGTTGGATTCTTCTCCCTTGAAAGCTCACAATGGAGACCGCAGTTGCATAGCTTCTGGGTTCCAAAACACCAGCAACAAGTCAATAGCAATGATACTAAACCAAGGGAAGTTTCCTAATCAATTACAGTCTTTGGTATCACCTTCAGAGTCTCAGTCTAATGTGTTGAGAAACCTGGAAATTGCAAGTCTTAGTAATGAGAGCTGCACATATAAATTGACTCCAGCACCTTTGAGAGGAGATGATGATGAAACAAAAGCTACTCAAGGCCAAAGTCATGAATTTAGAAGCTTATCTCACATTTGCCAAATGCCAAAACCAGACCAAGTCAATCCAGTAGTGGCTCGACAGTTCGCATTCGATCTGCCATATTTGAGAGCTCAACTCGGTAAGATAAGTTCTTCTGGTCAGGATCGATTCTTGCATAATGGTTTGAGTGCTGAACTGAACTTTTCTGATAATATAGTTACCAGAGACACTCAATATGTACCTGCCATGTGGAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

619

Amino Acids

69.41

Weight (kDa)

9.44

Isoelectric Point (pI)

59.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	135 - 193	2.8e-14	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005918)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g09360 FvH4_7g26330
malus_domestica	MD01G1172400.v1.1 MD04G1178300.v1.1 MD07G1238700.v1.1
prunus_persica	Prupe.2G267500_v2.0.a1 Prupe.6G298300_v2.0.a1
pyrus_communis	pycom01g18390 pycom07g21470
rosa_chinensis	RchiOBHm_Chr1g0372791 RchiOBHm_Chr3g0459751
rosa_laevigata	RLG00000025060 RLG00000026872
rosa_multiflora	Rmu_co8360863.1_g000001 Rmu_sc0000240.1_g000036 Rmu_ssc0000024.1_g000009
rosa_roxburghii	Rroxscaffold_6G00420000
rosa_rugosa	Rorug01G0374300 Rorug03G0038100
rosa_samantha	Rh1AG383100 Rh1BG346800 Rh1CG360100 Rh1DG377700 Rh3AG096600 Rh3BG099300 Rh3CG101200 Rh3DG100600
rosa_wichuraiana	Rw1G033730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	340, 1849
AccB1I	GGYRCC	1 cut(s)	512
AccB7I	CCANNNNNTGG	2 cut(s)	251, 1292
AccBSI	CCGCTC	1 cut(s)	147
AciI	CCGC	3 cut(s)	147, 446, 1390
AclWI	GGATC	3 cut(s)	813, 972, 1770
AcsI	RAATTY	4 cut(s)	247, 686, 1319, 1631
AcuI	CTGAAG	2 cut(s)	539, 1479
AdeI	CACNNNGTG	1 cut(s)	830
AfaI	GTAC	3 cut(s)	880, 1189, 1839
AfiI	CCNNNNNNNGG	5 cut(s)	251, 466, 1235, 1292, 1586
AgsI	TTSAA	6 cut(s)	494, 583, 731, 790, 1319, 1372
AhlI	ACTAGT	2 cut(s)	287, 1184
AjnI	CCWGG	4 cut(s)	300, 845, 1053, 1524
AjuI	GAANNNNNNNTTGG	2 cut(s)	1446, 1478
Alw21I	GWGCWC	2 cut(s)	1201, 1732
Alw26I	GTCTC	4 cut(s)	1151, 1380, 1506, 1818
AlwI	GGATC	3 cut(s)	813, 972, 1770
AoxI	GGCC	1 cut(s)	1618
ApeKI	GCWGC	5 cut(s)	218, 1220, 1223, 1282, 1554
ApoI	RAATTY	4 cut(s)	247, 686, 1319, 1631
AspS9I	GGNCC	4 cut(s)	161, 254, 720, 1103
AsuHPI	GGTGA	4 cut(s)	234, 290, 1307, 1482
AsuII	TTCGAA	2 cut(s)	325, 942
AvaII	GGWCC	4 cut(s)	161, 254, 720, 1103
BanI	GGYRCC	1 cut(s)	512
BanII	GRGCYC	2 cut(s)	59, 1732
BbsI	GAAGAC	3 cut(s)	84, 202, 1265
Bbv12I	GWGCWC	2 cut(s)	1201, 1732
BbvCI	CCTCAGC	1 cut(s)	589
BbvI	GCAGC	5 cut(s)	205, 1207, 1235, 1269, 1541
BccI	CCATC	2 cut(s)	917, 1294
BcgI	CGANNNNNNTGC	2 cut(s)	1031, 1065
BciT130I	CCWGG	4 cut(s)	302, 847, 1055, 1526
BclI	TGATCA	3 cut(s)	154, 295, 343
BcoDI	GTCTC	4 cut(s)	1151, 1380, 1506, 1818
BcuI	ACTAGT	2 cut(s)	287, 1184
BfaI	CTAG	8 cut(s)	99, 126, 171, 288, 857, 1125, 1185, 1203
BfmI	CTRYAG	2 cut(s)	416, 1221
BfuAI	ACCTGC	2 cut(s)	340, 1849
BglII	AGATCT	1 cut(s)	929
BisI	GCNGC	5 cut(s)	219, 1221, 1224, 1283, 1555
BlsI	GCNGC	5 cut(s)	220, 1222, 1225, 1284, 1556
Bme1390I	CCNGG	4 cut(s)	302, 847, 1055, 1526
Bme18I	GGWCC	4 cut(s)	161, 254, 720, 1103
BmgT120I	GGNCC	4 cut(s)	161, 254, 720, 1103
BmiI	GGNNCC	4 cut(s)	450, 514, 722, 1412
BmrFI	CCNGG	4 cut(s)	302, 847, 1055, 1526
BmsI	GCATC	3 cut(s)	944, 1187, 1252
BpiI	GAAGAC	3 cut(s)	84, 202, 1265
BplI	GAGNNNNNCTC	2 cut(s)	1719, 1751
BpmI	CTGGAG	1 cut(s)	1557
Bpu10I	CCTNAGC	1 cut(s)	589
Bpu14I	TTCGAA	2 cut(s)	325, 942
BpuEI	CTTGAG	3 cut(s)	416, 1058, 1599
Bsa29I	ATCGAT	2 cut(s)	952, 1765
BsaI	GGTCTC	1 cut(s)	1380
BsaJI	CCNNGG	3 cut(s)	781, 971, 1453
Bsc4I	CCNNNNNNNGG	5 cut(s)	251, 466, 1235, 1292, 1586
Bse3DI	GCAATG	2 cut(s)	579, 1446
BseBI	CCWGG	4 cut(s)	302, 847, 1055, 1526
BseCI	ATCGAT	2 cut(s)	952, 1765
BseDI	CCNNGG	3 cut(s)	781, 971, 1453
BseGI	GGATG	3 cut(s)	1148, 1243, 1286
BseLI	CCNNNNNNNGG	5 cut(s)	251, 466, 1235, 1292, 1586
BseMI	GCAATG	2 cut(s)	579, 1446
BseMII	CTCAG	5 cut(s)	603, 660, 705, 1000, 1517
BseRI	GAGGAG	2 cut(s)	436, 1602
BseXI	GCAGC	5 cut(s)	205, 1207, 1235, 1269, 1541
BsgI	GTGCAG	1 cut(s)	1540
BshFI	GGCC	1 cut(s)	1620
BshNI	GGYRCC	1 cut(s)	512
BshVI	ATCGAT	2 cut(s)	952, 1765
BsiHKAI	GWGCWC	2 cut(s)	1201, 1732
BslFI	GGGAC	2 cut(s)	706, 925
BslI	CCNNNNNNNGG	5 cut(s)	251, 466, 1235, 1292, 1586
BsmAI	GTCTC	4 cut(s)	1151, 1380, 1506, 1818
BsmFI	GGGAC	2 cut(s)	706, 925
BsmI	GAATGC	2 cut(s)	574, 1706
BsnI	GGCC	1 cut(s)	1620
Bso31I	GGTCTC	1 cut(s)	1380
Bsp119I	TTCGAA	2 cut(s)	325, 942
Bsp1286I	GDGCHC	3 cut(s)	59, 1201, 1732
Bsp143I	GATC	9 cut(s)	154, 295, 343, 818, 929, 949, 977, 1711, 1762
BspACI	CCGC	3 cut(s)	147, 446, 1390
BspANI	GGCC	1 cut(s)	1620
BspCNI	CTCAG	5 cut(s)	602, 661, 704, 999, 1516
BspDI	ATCGAT	2 cut(s)	952, 1765
BspHI	TCATGA	3 cut(s)	151, 1254, 1627
BspLI	GGNNCC	4 cut(s)	450, 514, 722, 1412
BspMAI	CTGCAG	1 cut(s)	1225
BspMI	ACCTGC	2 cut(s)	340, 1849
BspPI	GGATC	3 cut(s)	813, 972, 1770
BspQI	GCTCTTC	3 cut(s)	47, 137, 489
BspT104I	TTCGAA	2 cut(s)	325, 942
BspT107I	GGYRCC	1 cut(s)	512
BspTNI	GGTCTC	1 cut(s)	1380
BsrBI	CCGCTC	1 cut(s)	147
BsrDI	GCAATG	2 cut(s)	579, 1446
BssECI	CCNNGG	3 cut(s)	781, 971, 1453
BssMI	GATC	9 cut(s)	154, 295, 343, 818, 929, 949, 977, 1711, 1762
BssT1I	CCWWGG	3 cut(s)	781, 971, 1453
Bst2UI	CCWGG	4 cut(s)	302, 847, 1055, 1526
Bst4CI	ACNGT	2 cut(s)	1479, 1701
Bst6I	CTCTTC	4 cut(s)	47, 137, 185, 489
BstBI	TTCGAA	2 cut(s)	325, 942
BstC8I	GCNNGC	2 cut(s)	616, 1241
BstEII	GGTNACC	1 cut(s)	1295
BstENI	CCTNNNNNAGG	1 cut(s)	1584
BstF5I	GGATG	3 cut(s)	1148, 1243, 1286
BstKTI	GATC	9 cut(s)	157, 298, 346, 821, 932, 952, 980, 1714, 1765
BstMAI	GTCTC	4 cut(s)	1151, 1380, 1506, 1818
BstMBI	GATC	9 cut(s)	154, 295, 343, 818, 929, 949, 977, 1711, 1762
BstMWI	GCNNNNNNNGC	3 cut(s)	365, 385, 1220
BstNI	CCWGG	4 cut(s)	302, 847, 1055, 1526
BstNSI	RCATGY	1 cut(s)	1046
BstPI	GGTNACC	1 cut(s)	1295
BstSCI	CCNGG	4 cut(s)	300, 845, 1053, 1524
BstSFI	CTRYAG	2 cut(s)	416, 1221
BstV1I	GCAGC	5 cut(s)	205, 1207, 1235, 1269, 1541
BstV2I	GAAGAC	3 cut(s)	84, 202, 1265
BstX2I	RGATCY	2 cut(s)	929, 977
BstXI	CCANNNNNNTGG	1 cut(s)	1061
BstYI	RGATCY	2 cut(s)	929, 977
Bsu15I	ATCGAT	2 cut(s)	952, 1765
BsuRI	GGCC	1 cut(s)	1620
BsuTUI	ATCGAT	2 cut(s)	952, 1765
BtsCI	GGATG	3 cut(s)	1148, 1243, 1286
BtsIMutI	CAGTG	4 cut(s)	264, 994, 1027, 1297
BveI	ACCTGC	2 cut(s)	340, 1849
Cac8I	GCNNGC	2 cut(s)	616, 1241
CciI	TCATGA	3 cut(s)	151, 1254, 1627
Cfr13I	GGNCC	4 cut(s)	161, 254, 720, 1103
ClaI	ATCGAT	2 cut(s)	952, 1765
CseI	GACGC	1 cut(s)	879
CsiI	ACCWGGT	1 cut(s)	300
Csp6I	GTAC	3 cut(s)	879, 1188, 1838
CviQI	GTAC	3 cut(s)	879, 1188, 1838
DpnI	GATC	9 cut(s)	156, 297, 345, 820, 931, 951, 979, 1713, 1764
DpnII	GATC	9 cut(s)	154, 295, 343, 818, 929, 949, 977, 1711, 1762
DraIII	CACNNNGTG	1 cut(s)	830
Eam1104I	CTCTTC	4 cut(s)	47, 137, 185, 489
EarI	CTCTTC	4 cut(s)	47, 137, 185, 489
Ecl136II	GAGCTC	1 cut(s)	1730
Eco130I	CCWWGG	3 cut(s)	781, 971, 1453
Eco24I	GRGCYC	2 cut(s)	59, 1732
Eco31I	GGTCTC	1 cut(s)	1380
Eco47I	GGWCC	4 cut(s)	161, 254, 720, 1103
Eco53kI	GAGCTC	1 cut(s)	1730
Eco57I	CTGAAG	2 cut(s)	539, 1479
Eco91I	GGTNACC	1 cut(s)	1295
EcoICRI	GAGCTC	1 cut(s)	1730
EcoNI	CCTNNNNNAGG	1 cut(s)	1584
EcoO109I	RGGNCCY	1 cut(s)	720
EcoO65I	GGTNACC	1 cut(s)	1295
EcoRI	GAATTC	1 cut(s)	686
EcoRII	CCWGG	4 cut(s)	300, 845, 1053, 1524
EcoT14I	CCWWGG	3 cut(s)	781, 971, 1453
EcoT22I	ATGCAT	2 cut(s)	579, 627
EcoT38I	GRGCYC	2 cut(s)	59, 1732
ErhI	CCWWGG	3 cut(s)	781, 971, 1453
FaqI	GGGAC	2 cut(s)	706, 925
FbaI	TGATCA	3 cut(s)	154, 295, 343
Fnu4HI	GCNGC	5 cut(s)	219, 1221, 1224, 1283, 1555
FokI	GGATG	3 cut(s)	1155, 1230, 1273
FriOI	GRGCYC	2 cut(s)	59, 1732
Fsp4HI	GCNGC	5 cut(s)	219, 1221, 1224, 1283, 1555
FspBI	CTAG	8 cut(s)	99, 126, 171, 288, 857, 1125, 1185, 1203
GluI	GCNGC	5 cut(s)	219, 1221, 1224, 1283, 1555
GsuI	CTGGAG	1 cut(s)	1557
HaeIII	GGCC	1 cut(s)	1620
HgaI	GACGC	1 cut(s)	879
HincII	GTYRAC	1 cut(s)	457
HindII	GTYRAC	1 cut(s)	457
HindIII	AAGCTT	2 cut(s)	1075, 1639
HinfI	GANTC	8 cut(s)	198, 680, 998, 1345, 1358, 1499, 1570, 1767
HpaI	GTTAAC	1 cut(s)	457
HphI	GGTGA	4 cut(s)	234, 290, 1307, 1482
Hpy166II	GTNNAC	1 cut(s)	457
Hpy188I	TCNGA	4 cut(s)	685, 694, 1498, 1807
Hpy188III	TCNNGA	8 cut(s)	152, 272, 407, 473, 668, 1255, 1628, 1760
Hpy8I	GTNNAC	1 cut(s)	457
HpyAV	CCTTC	5 cut(s)	237, 530, 634, 991, 1503
HpyCH4III	ACNGT	2 cut(s)	1479, 1701
HpyF10VI	GCNNNNNNNGC	3 cut(s)	365, 385, 1220
Ksp22I	TGATCA	3 cut(s)	154, 295, 343
KspAI	GTTAAC	1 cut(s)	457
Kzo9I	GATC	9 cut(s)	154, 295, 343, 818, 929, 949, 977, 1711, 1762
LguI	GCTCTTC	3 cut(s)	47, 137, 489
LmnI	GCTCC	2 cut(s)	448, 623
Lsp1109I	GCAGC	5 cut(s)	205, 1207, 1235, 1269, 1541
LweI	GCATC	3 cut(s)	944, 1187, 1252
MabI	ACCWGGT	1 cut(s)	300
MaeI	CTAG	8 cut(s)	99, 126, 171, 288, 857, 1125, 1185, 1203
MaeIII	GTNAC	4 cut(s)	1064, 1163, 1295, 1816
MalI	GATC	9 cut(s)	156, 297, 345, 820, 931, 951, 979, 1713, 1764
MbiI	CCGCTC	1 cut(s)	147
MboI	GATC	9 cut(s)	154, 295, 343, 818, 929, 949, 977, 1711, 1762
MflI	RGATCY	2 cut(s)	929, 977
MhlI	GDGCHC	3 cut(s)	59, 1201, 1732
MlyI	GAGTC	5 cut(s)	192, 689, 1007, 1508, 1564
MmeI	TCCRAC	4 cut(s)	657, 715, 1174, 1335
Mph1103I	ATGCAT	2 cut(s)	579, 627
MseI	TTAA	1 cut(s)	456
MslI	CAYNNNNRTG	2 cut(s)	748, 1338
MspA1I	CMGCKG	1 cut(s)	1282
MspR9I	CCNGG	4 cut(s)	302, 847, 1055, 1526
Mva1269I	GAATGC	2 cut(s)	574, 1706
MvaI	CCWGG	4 cut(s)	302, 847, 1055, 1526
MwoI	GCNNNNNNNGC	3 cut(s)	365, 385, 1220
NdeII	GATC	9 cut(s)	154, 295, 343, 818, 929, 949, 977, 1711, 1762
NlaIV	GGNNCC	4 cut(s)	450, 514, 722, 1412
NmuCI	GTSAC	2 cut(s)	1163, 1295
NsiI	ATGCAT	2 cut(s)	579, 627
NspI	RCATGY	1 cut(s)	1046
NspV	TTCGAA	2 cut(s)	325, 942
PagI	TCATGA	3 cut(s)	151, 1254, 1627
PciSI	GCTCTTC	3 cut(s)	47, 137, 489
PctI	GAATGC	2 cut(s)	574, 1706
PfeI	GAWTC	3 cut(s)	1345, 1358, 1767
PflFI	GACNNNGTC	1 cut(s)	1676
PflMI	CCANNNNNTGG	2 cut(s)	251, 1292
PkrI	GCNGC	5 cut(s)	220, 1222, 1225, 1284, 1556
PleI	GAGTC	5 cut(s)	192, 688, 1006, 1507, 1564
PpsI	GAGTC	5 cut(s)	192, 688, 1006, 1507, 1564
PpuMI	RGGWCCY	1 cut(s)	720
Psp124BI	GAGCTC	1 cut(s)	1732
Psp5II	RGGWCCY	1 cut(s)	720
Psp6I	CCWGG	4 cut(s)	300, 845, 1053, 1524
PspEI	GGTNACC	1 cut(s)	1295
PspGI	CCWGG	4 cut(s)	300, 845, 1053, 1524
PspN4I	GGNNCC	4 cut(s)	450, 514, 722, 1412
PspPI	GGNCC	4 cut(s)	161, 254, 720, 1103
PspPPI	RGGWCCY	1 cut(s)	720
PsrI	GAACNNNNNNTAC	2 cut(s)	1732, 1764
PstI	CTGCAG	1 cut(s)	1225
PsuI	RGATCY	2 cut(s)	929, 977
PsyI	GACNNNGTC	1 cut(s)	1676
PvuII	CAGCTG	1 cut(s)	1282
RsaI	GTAC	3 cut(s)	880, 1189, 1839
RsaNI	GTAC	3 cut(s)	879, 1188, 1838
RseI	CAYNNNNRTG	2 cut(s)	748, 1338
SacI	GAGCTC	1 cut(s)	1732
SapI	GCTCTTC	3 cut(s)	47, 137, 489
SaqAI	TTAA	1 cut(s)	456
SatI	GCNGC	5 cut(s)	219, 1221, 1224, 1283, 1555
Sau3AI	GATC	9 cut(s)	154, 295, 343, 818, 929, 949, 977, 1711, 1762
Sau96I	GGNCC	4 cut(s)	161, 254, 720, 1103
SchI	GAGTC	5 cut(s)	192, 689, 1007, 1508, 1564
ScrFI	CCNGG	4 cut(s)	302, 847, 1055, 1526
SduI	GDGCHC	3 cut(s)	59, 1201, 1732
SexAI	ACCWGGT	1 cut(s)	300
SfaNI	GCATC	3 cut(s)	944, 1187, 1252
SfcI	CTRYAG	2 cut(s)	416, 1221
SfuI	TTCGAA	2 cut(s)	325, 942
SinI	GGWCC	4 cut(s)	161, 254, 720, 1103
SmiMI	CAYNNNNRTG	2 cut(s)	748, 1338
SmlI	CTYRAG	3 cut(s)	395, 1037, 1614
SmoI	CTYRAG	3 cut(s)	395, 1037, 1614
SpeI	ACTAGT	2 cut(s)	287, 1184
SsiI	CCGC	3 cut(s)	147, 446, 1390
SspI	AATATT	1 cut(s)	441
SspMI	CTAG	8 cut(s)	99, 126, 171, 288, 857, 1125, 1185, 1203
SstI	GAGCTC	1 cut(s)	1732
StyD4I	CCNGG	4 cut(s)	300, 845, 1053, 1524
StyI	CCWWGG	3 cut(s)	781, 971, 1453
TaaI	ACNGT	2 cut(s)	1479, 1701
TaqI	TCGA	7 cut(s)	325, 942, 952, 967, 1696, 1710, 1765
TfiI	GAWTC	3 cut(s)	1345, 1358, 1767
Tru1I	TTAA	1 cut(s)	456
Tru9I	TTAA	1 cut(s)	456
TscAI	CASTG	4 cut(s)	264, 994, 1027, 1297
TseFI	GTSAC	2 cut(s)	1163, 1295
TseI	GCWGC	5 cut(s)	218, 1220, 1223, 1282, 1554
Tsp45I	GTSAC	2 cut(s)	1163, 1295
TspRI	CASTG	4 cut(s)	264, 994, 1027, 1297
Tth111I	GACNNNGTC	1 cut(s)	1676
Van91I	CCANNNNNTGG	2 cut(s)	251, 1292
VpaK11BI	GGWCC	4 cut(s)	161, 254, 720, 1103
XagI	CCTNNNNNAGG	1 cut(s)	1584
XapI	RAATTY	4 cut(s)	247, 686, 1319, 1631
XceI	RCATGY	1 cut(s)	1046
XcmI	CCANNNNNNNNNTGG	1 cut(s)	731
XspI	CTAG	8 cut(s)	99, 126, 171, 288, 857, 1125, 1185, 1203
Zsp2I	ATGCAT	2 cut(s)	579, 627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.