MD05G1022300.v1.1
BZIP Family

Transcription factor

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Reverse (-)
3652030 .. 3656373
4344 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1022300.v1.1.491

Sequence Viewer

Length: 1266 bp
ATGGCCCCCCTTCTCTCCACTTGCTACTCACTCACTACTCAGCAGCTGCAGCTTCTCCAGGTCCACCCTACCACCCAAAACCAAAACCAAAACCAAAAGCACTTTTCTCACTTTTACCAACCTTCTCCCTTCTCCTCCTTTGCTTTCAACAACCTTAACTCCGGCCACCGCCCTCCGCCACCACTCGCCACCTCAAACCGAAAAAAAGGACCAAAAGACAAAAAAATGGATTCCAACAACATCAACAACTTCGGCGCTGCTTCCAGACCGTCCCCGACATCATCGACTGACATGGAGCAGATGTCGGAGACCCCTCAGCGCGGGTCCCACCACCGCCGGGCCCACTCCGACACCTCCTTCCGCATCCCCAACTTCGACGACCTCCTCCTCTTCGACCCTTCCGACCTCGACCTCTCCTGCCTCCCCTCCCCAACCCTCCTGCCACGTGGCGGCAACAGCAGCAACAACAACATCCCCATGTCCCTCGACTCCGACGACTCCTCGGAGGGCCAACCACCCAACCCCTTCTCCTCCACCCCCAAGCCTGCCGCTTCCTCCGGCTCCACGGCCACCGCTGCCCACCTCCGGAGCCTCTCCGTCGATTCCGACTTCTTCGACGGCCTGGGCCTGGGGGATTCCGGCAGGGAAGTGAGCGGGGGGCAGAGGTCTGGGTCCCACCACAGGCACAGCAGCTCGATGGACGGCTCGTCTTTCGATGCGGACTCGTCGGTGATGACGCTGAACGGCTTCAAGAAGTCCGTTGCTCCTGAGAGACTTGCTGAGCTCTCTCTGATTGACCCTAAGAGAGCCAAAAGGATATTAGCTAATAGGCAATCGGCTGCGAGGTCAAAGGAGAGGAAGGTGAGGTATACGAATGAGCTGGAGAGGAAGGTGCAGACGCTTCAGACGGAAGCAACCACCCTCTCAGCACAGGTCACTCTGTTACAGAGAGACACTACTGTCATAACTGCTGAGAATAAGGAGCTCAAACTTCGCCTACAGGCTCTGGAGCAACAAGCACAGCTTAGAGATGCTTTGAATGAGAAACTTAAGGAGGAAGTGCAGCGGCTTAAGATTGAAACCAACCAAATCCCACCCGGGGCTGGGAATGGAAACCCTTTCTACCGAGGGCTTCCCCCTCAATATGGTCAGACCCAGCACCACCAGAACCACAACCAGCAGAACCAGCACCAGCAGCATCACAACCAGAATGTCACCAATGGGCAGGCTCACCCGAGCTTTATGGACTTCAACGGGAGGGCATAG

Protein Analysis

422

Amino Acids

46.53

Weight (kDa)

9.13

Isoelectric Point (pI)

49.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 266 - 317 2.9e-07 Basic region leucine zipper
bZIP_1 PF00170 268 - 315 1.2e-07 bZIP transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 959
AccBSI CCGCTC 1 cut(s) 654
AccI GTMKAC 1 cut(s) 869
AccII CGCG 1 cut(s) 321
AccIII TCCGGA 1 cut(s) 585
AcoI YGGCCR 2 cut(s) 163, 567
AcuI CTGAAG 1 cut(s) 887
AcvI CACGTG 1 cut(s) 446
AflII CTTAAG 2 cut(s) 1049, 1070
AgsI TTSAA 5 cut(s) 148, 751, 1039, 1079, 1252
AhdI GACNNNNNGTC 1 cut(s) 706
AjnI CCWGG 3 cut(s) 57, 621, 627
AluBI AGCT 9 cut(s) 46, 52, 693, 784, 824, 880, 985, 1024, 1239
AluI AGCT 9 cut(s) 46, 52, 693, 784, 824, 880, 985, 1024, 1239
Alw21I GWGCWC 2 cut(s) 786, 987
Alw26I GTCTC 3 cut(s) 302, 766, 945
AlwNI CAGNNNCTG 2 cut(s) 46, 1006
Ama87I CYCGRG 2 cut(s) 1097, 1234
Aor13HI TCCGGA 1 cut(s) 585
AoxI GGCC 7 cut(s) 3, 163, 339, 508, 567, 619, 625
ApaI GGGCCC 1 cut(s) 343
Asp700I GAANNNNTTC 1 cut(s) 746
AspLEI GCGC 2 cut(s) 257, 321
AspS9I GGNCC 9 cut(s) 4, 61, 209, 324, 339, 340, 508, 625, 672
AsuC2I CCSGG 3 cut(s) 338, 1098, 1099
AsuHPI GGTGA 4 cut(s) 742, 874, 1207, 1223
AvaI CYCGRG 2 cut(s) 1097, 1234
AvaII GGWCC 4 cut(s) 61, 209, 324, 672
BaeGI GKGCMC 1 cut(s) 343
BanII GRGCYC 3 cut(s) 343, 786, 987
BbrPI CACGTG 1 cut(s) 446
Bbv12I GWGCWC 2 cut(s) 786, 987
BbvCI CCTCAGC 1 cut(s) 315
BccI CCATC 1 cut(s) 691
BceAI ACGGC 4 cut(s) 582, 634, 718, 760
BciT130I CCWGG 3 cut(s) 59, 623, 629
BcnI CCSGG 3 cut(s) 338, 1098, 1099
BcoDI GTCTC 3 cut(s) 302, 766, 945
BfmI CTRYAG 2 cut(s) 47, 998
BfoI RGCGCY 1 cut(s) 258
BfrI CTTAAG 2 cut(s) 1049, 1070
BlpI GCTNAGC 1 cut(s) 780
Bme1390I CCNGG 6 cut(s) 59, 338, 623, 629, 1098, 1099
Bme18I GGWCC 4 cut(s) 61, 209, 324, 672
BmeRI GACNNNNNGTC 1 cut(s) 706
BmeT110I CYCGRG 2 cut(s) 1097, 1234
BmgT120I GGNCC 9 cut(s) 4, 61, 209, 324, 339, 340, 508, 625, 672
BmiI GGNNCC 8 cut(s) 6, 325, 326, 341, 562, 590, 673, 674
BmrFI CCNGG 6 cut(s) 59, 338, 623, 629, 1098, 1099
BmsI GCATC 4 cut(s) 372, 706, 1021, 1207
BpmI CTGGAG 3 cut(s) 41, 902, 1028
Bpu10I CCTNAGC 1 cut(s) 315
Bpu1102I GCTNAGC 1 cut(s) 780
BpuMI CCSGG 3 cut(s) 338, 1098, 1099
BsaAI YACGTR 1 cut(s) 446
BsaI GGTCTC 1 cut(s) 302
BsaJI CCNNGG 7 cut(s) 501, 564, 622, 628, 1097, 1098, 1126
BsaWI WCCGGW 1 cut(s) 585
BsaXI ACNNNNNCTCC 6 cut(s) 143, 173, 287, 317, 512, 542
BseAI TCCGGA 1 cut(s) 585
BseBI CCWGG 3 cut(s) 59, 623, 629
BseDI CCNNGG 7 cut(s) 501, 564, 622, 628, 1097, 1098, 1126
BseGI GGATG 2 cut(s) 363, 471
BseMII CTCAG 6 cut(s) 53, 329, 759, 771, 939, 963
BseRI GAGGAG 5 cut(s) 124, 374, 377, 490, 520
BseSI GKGCMC 1 cut(s) 343
BseYI CCCAGC 2 cut(s) 1103, 1155
BsgI GTGCAG 2 cut(s) 914, 1082
Bsh1236I CGCG 1 cut(s) 321
BshFI GGCC 7 cut(s) 5, 165, 341, 510, 569, 621, 627
BsiHKAI GWGCWC 2 cut(s) 786, 987
BsiHKCI CYCGRG 2 cut(s) 1097, 1234
BsiSI CCGG 6 cut(s) 162, 337, 558, 586, 639, 1098
BslFI GGGAC 4 cut(s) 256, 310, 466, 658
BsmAI GTCTC 3 cut(s) 302, 766, 945
BsmFI GGGAC 4 cut(s) 256, 310, 466, 658
BsnI GGCC 7 cut(s) 5, 165, 341, 510, 569, 621, 627
Bso31I GGTCTC 1 cut(s) 302
BsoBI CYCGRG 2 cut(s) 1097, 1234
Bsp120I GGGCCC 1 cut(s) 339
Bsp1286I GDGCHC 3 cut(s) 343, 786, 987
Bsp13I TCCGGA 1 cut(s) 585
Bsp1720I GCTNAGC 1 cut(s) 780
BspANI GGCC 7 cut(s) 5, 165, 341, 510, 569, 621, 627
BspCNI CTCAG 6 cut(s) 52, 328, 760, 772, 938, 964
BspEI TCCGGA 1 cut(s) 585
BspFNI CGCG 1 cut(s) 321
BspLI GGNNCC 8 cut(s) 6, 325, 326, 341, 562, 590, 673, 674
BspMAI CTGCAG 1 cut(s) 51
BspTI CTTAAG 2 cut(s) 1049, 1070
BspTNI GGTCTC 1 cut(s) 302
BsrBI CCGCTC 1 cut(s) 654
BssECI CCNNGG 7 cut(s) 501, 564, 622, 628, 1097, 1098, 1126
BssNAI GTATAC 1 cut(s) 870
Bst1107I GTATAC 1 cut(s) 870
Bst2UI CCWGG 3 cut(s) 59, 623, 629
Bst4CI ACNGT 2 cut(s) 270, 961
Bst6I CTCTTC 1 cut(s) 395
BstAFI CTTAAG 2 cut(s) 1049, 1070
BstBAI YACGTR 1 cut(s) 446
BstC8I GCNNGC 2 cut(s) 546, 1227
BstDEI CTNAG 8 cut(s) 39, 315, 768, 780, 801, 925, 972, 1025
BstDSI CCRYGG 1 cut(s) 564
BstF5I GGATG 2 cut(s) 363, 471
BstFNI CGCG 1 cut(s) 321
BstH2I RGCGCY 1 cut(s) 258
BstHHI GCGC 2 cut(s) 257, 321
BstMAI GTCTC 3 cut(s) 302, 766, 945
BstMWI GCNNNNNNNGC 6 cut(s) 49, 456, 459, 575, 1186, 1195
BstNI CCWGG 3 cut(s) 59, 623, 629
BstSCI CCNGG 6 cut(s) 57, 336, 621, 627, 1096, 1097
BstSFI CTRYAG 2 cut(s) 47, 998
BstSLI GKGCMC 1 cut(s) 343
BstUI CGCG 1 cut(s) 321
BstZ17I GTATAC 1 cut(s) 870
BsuRI GGCC 7 cut(s) 5, 165, 341, 510, 569, 621, 627
BtgI CCRYGG 1 cut(s) 564
BtsCI GGATG 2 cut(s) 363, 471
Cac8I GCNNGC 2 cut(s) 546, 1227
CaiI CAGNNNCTG 2 cut(s) 46, 1006
CfoI GCGC 2 cut(s) 257, 321
Cfr13I GGNCC 9 cut(s) 4, 61, 209, 324, 339, 340, 508, 625, 672
Cfr9I CCCGGG 1 cut(s) 1097
CseI GACGC 2 cut(s) 745, 907
CviAII CATG 2 cut(s) 292, 478
DdeI CTNAG 8 cut(s) 39, 315, 768, 780, 801, 925, 972, 1025
DrdI GACNNNNNNGTC 1 cut(s) 959
DriI GACNNNNNGTC 1 cut(s) 706
DseDI GACNNNNNNGTC 1 cut(s) 959
EaeI YGGCCR 2 cut(s) 163, 567
Eam1104I CTCTTC 1 cut(s) 395
Eam1105I GACNNNNNGTC 1 cut(s) 706
EarI CTCTTC 1 cut(s) 395
EciI GGCGGA 1 cut(s) 165
Ecl136II GAGCTC 2 cut(s) 784, 985
Eco24I GRGCYC 3 cut(s) 343, 786, 987
Eco31I GGTCTC 1 cut(s) 302
Eco47I GGWCC 4 cut(s) 61, 209, 324, 672
Eco53kI GAGCTC 2 cut(s) 784, 985
Eco57I CTGAAG 1 cut(s) 887
Eco72I CACGTG 1 cut(s) 446
Eco88I CYCGRG 2 cut(s) 1097, 1234
EcoICRI GAGCTC 2 cut(s) 784, 985
EcoO109I RGGNCCY 2 cut(s) 324, 672
EcoRII CCWGG 3 cut(s) 57, 621, 627
EcoT38I GRGCYC 3 cut(s) 343, 786, 987
FaeI CATG 2 cut(s) 295, 481
FaiI YATR 7 cut(s) 293, 479, 870, 965, 1146, 1244, 1264
FalI AAGNNNNNCTT 2 cut(s) 1008, 1040
FaqI GGGAC 4 cut(s) 256, 310, 466, 658
FatI CATG 2 cut(s) 291, 477
FauI CCCGC 2 cut(s) 314, 647
FblI GTMKAC 1 cut(s) 869
FokI GGATG 2 cut(s) 350, 458
FriOI GRGCYC 3 cut(s) 343, 786, 987
GlaI GCGC 2 cut(s) 256, 320
GsaI CCCAGC 2 cut(s) 1107, 1159
GsuI CTGGAG 3 cut(s) 41, 902, 1028
HaeII RGCGCY 1 cut(s) 258
HaeIII GGCC 7 cut(s) 5, 165, 341, 510, 569, 621, 627
HapII CCGG 6 cut(s) 162, 337, 558, 586, 639, 1098
HgaI GACGC 2 cut(s) 745, 907
HhaI GCGC 2 cut(s) 257, 321
Hin1II CATG 2 cut(s) 295, 481
Hin6I GCGC 2 cut(s) 255, 319
HinP1I GCGC 2 cut(s) 255, 319
HinfI GANTC 6 cut(s) 230, 488, 497, 602, 635, 722
HpaII CCGG 6 cut(s) 162, 337, 558, 586, 639, 1098
HphI GGTGA 4 cut(s) 742, 874, 1207, 1223
Hpy166II GTNNAC 2 cut(s) 64, 870
Hpy188I TCNGA 9 cut(s) 307, 349, 403, 493, 505, 607, 792, 906, 1152
Hpy188III TCNNGA 5 cut(s) 264, 586, 751, 767, 1007
Hpy8I GTNNAC 2 cut(s) 64, 870
Hpy99I CGWCG 5 cut(s) 380, 497, 602, 620, 730
HpyAV CCTTC 8 cut(s) 20, 132, 139, 367, 408, 535, 853, 883
HpyCH4III ACNGT 2 cut(s) 270, 961
HpyCH4IV ACGT 1 cut(s) 445
HpyCH4V TGCA 3 cut(s) 49, 895, 1063
HpyF10VI GCNNNNNNNGC 6 cut(s) 49, 456, 459, 575, 1186, 1195
HpyF3I CTNAG 8 cut(s) 39, 315, 768, 780, 801, 925, 972, 1025
HpySE526I ACGT 1 cut(s) 445
Hsp92II CATG 2 cut(s) 295, 481
HspAI GCGC 2 cut(s) 255, 319
KflI GGGWCCC 2 cut(s) 324, 672
Kpn2I TCCGGA 1 cut(s) 585
LmnI GCTCC 6 cut(s) 295, 566, 588, 769, 982, 1009
LweI GCATC 4 cut(s) 372, 706, 1021, 1207
MaeII ACGT 1 cut(s) 445
MaeIII GTNAC 3 cut(s) 934, 942, 1213
MbiI CCGCTC 1 cut(s) 654
MboII GAAGA 2 cut(s) 382, 604
MhlI GDGCHC 3 cut(s) 343, 786, 987
MlyI GAGTC 3 cut(s) 482, 491, 716
MmeI TCCRAC 6 cut(s) 258, 285, 372, 426, 516, 630
MroI TCCGGA 1 cut(s) 585
MroXI GAANNNNTTC 1 cut(s) 746
MseI TTAA 3 cut(s) 156, 1050, 1071
MslI CAYNNNNRTG 1 cut(s) 476
MspA1I CMGCKG 3 cut(s) 46, 575, 1066
MspCI CTTAAG 2 cut(s) 1049, 1070
MspI CCGG 6 cut(s) 162, 337, 558, 586, 639, 1098
MspR9I CCNGG 6 cut(s) 59, 338, 623, 629, 1098, 1099
MvaI CCWGG 3 cut(s) 59, 623, 629
MvnI CGCG 1 cut(s) 321
MwoI GCNNNNNNNGC 6 cut(s) 49, 456, 459, 575, 1186, 1195
NciI CCSGG 3 cut(s) 338, 1098, 1099
NlaIII CATG 2 cut(s) 295, 481
NlaIV GGNNCC 8 cut(s) 6, 325, 326, 341, 562, 590, 673, 674
NmuCI GTSAC 2 cut(s) 934, 1213
PcsI WCGNNNNNNNCGW 2 cut(s) 399, 492
PdmI GAANNNNTTC 1 cut(s) 746
PfeI GAWTC 3 cut(s) 230, 602, 635
PleI GAGTC 3 cut(s) 482, 491, 716
PmaCI CACGTG 1 cut(s) 446
PmlI CACGTG 1 cut(s) 446
PpsI GAGTC 3 cut(s) 482, 491, 716
Ppu21I YACGTR 1 cut(s) 446
PpuMI RGGWCCY 2 cut(s) 324, 672
Psp124BI GAGCTC 2 cut(s) 786, 987
Psp5II RGGWCCY 2 cut(s) 324, 672
Psp6I CCWGG 3 cut(s) 57, 621, 627
PspCI CACGTG 1 cut(s) 446
PspFI CCCAGC 2 cut(s) 1103, 1155
PspGI CCWGG 3 cut(s) 57, 621, 627
PspN4I GGNNCC 8 cut(s) 6, 325, 326, 341, 562, 590, 673, 674
PspOMI GGGCCC 1 cut(s) 339
PspPI GGNCC 9 cut(s) 4, 61, 209, 324, 339, 340, 508, 625, 672
PspPPI RGGWCCY 2 cut(s) 324, 672
PstI CTGCAG 1 cut(s) 51
PstNI CAGNNNCTG 2 cut(s) 46, 1006
PvuII CAGCTG 1 cut(s) 46
RseI CAYNNNNRTG 1 cut(s) 476
SacI GAGCTC 2 cut(s) 786, 987
SaqAI TTAA 3 cut(s) 156, 1050, 1071
Sau96I GGNCC 9 cut(s) 4, 61, 209, 324, 339, 340, 508, 625, 672
SchI GAGTC 3 cut(s) 482, 491, 716
ScrFI CCNGG 6 cut(s) 59, 338, 623, 629, 1098, 1099
SduI GDGCHC 3 cut(s) 343, 786, 987
SfaNI GCATC 4 cut(s) 372, 706, 1021, 1207
SfcI CTRYAG 2 cut(s) 47, 998
SinI GGWCC 4 cut(s) 61, 209, 324, 672
SmaI CCCGGG 1 cut(s) 1099
SmiMI CAYNNNNRTG 1 cut(s) 476
SmlI CTYRAG 2 cut(s) 1049, 1070
SmoI CTYRAG 2 cut(s) 1049, 1070
SstI GAGCTC 2 cut(s) 786, 987
StyD4I CCNGG 6 cut(s) 57, 336, 621, 627, 1096, 1097
TaaI ACNGT 2 cut(s) 270, 961
TaiI ACGT 1 cut(s) 448
TaqI TCGA 9 cut(s) 284, 375, 393, 408, 486, 600, 615, 695, 714
TauI GCSGC 3 cut(s) 453, 551, 1069
TfiI GAWTC 3 cut(s) 230, 602, 635
Tru1I TTAA 3 cut(s) 156, 1050, 1071
Tru9I TTAA 3 cut(s) 156, 1050, 1071
TseFI GTSAC 2 cut(s) 934, 1213
Tsp45I GTSAC 2 cut(s) 934, 1213
TspGWI ACGGA 3 cut(s) 586, 748, 923
TspMI CCCGGG 1 cut(s) 1097
Vha464I CTTAAG 2 cut(s) 1049, 1070
VpaK11BI GGWCC 4 cut(s) 61, 209, 324, 672
XmaI CCCGGG 1 cut(s) 1097
XmiI GTMKAC 1 cut(s) 869
XmnI GAANNNNTTC 1 cut(s) 746
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.