MD10G1023800.v1.1
BZIP Family

Transcription factor

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
2972943 .. 2977236
4294 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1023800.v1.1.491

Sequence Viewer

Length: 1029 bp
ATGGATTCCAACAACGTCAACAACAACTTCGGCGCTGCTGCCGGACCCTTCCCGACATTCAATGACATGGAGCAGATGTCGGAGACCCCTCAGCGCGGGTCCCACCACCGCCGGGCTCACTCCGACACATCCTTCCGCACCCCCAACTTCGACGACCTCCTCCTCTTCGACCCTTCCGACCTCGACCTCTCCTGCCTCGCCTCCCCCAACCTCCCGCCACGTGGCAGTGACAGCGACAACATCGCCATGTTTCTCGAGTCCGACGACTCCTCGGGGGGCCAACCACCCAACCCCTTCTCCTCCACTCCCAAGCCCACCGCTTCCTCCGGCTCCACCGCCACCGCTGCCCACCTCCGGAGCCTCTCCGTCGACTCTGACTTTTTCGACGGCCTGGGCCTGGGGGATTCAGGCAGGGAACTGACTGGGGGGCAGAGGTCTCGATCCCACAGGCACAGCATCTCGATGGACGGTTCGTCTATCGAGGCGGACTCGTCGGTGATCACCCTGAACGGCTTCAAGAAGTCCATAGCTCCTGAGAGACTTGCTGAGCTCTCTCTGACCGACCCTAAGAGAGCTAAAAGGATTTTAGCTAATAGGCAATCCGCTGCGAGGTCCAAGGAGAGGAAGGTGAAGTATGCGAATGAGCTGGAGAGGAAGGTGCAGACTCTTCAGACCGAGGCGACCACCCTCTCCGCCCAGGTCACTCTGTTACAGAGAGACACTACTGTCATAACTGCTGAGAATAAGGAGCTCAAACTTCGCCTACAGGCTCTGGAGCAACAATCACAGCTTAGAGATGCCTTGAGTGAGAAACTTAAGGAGGAAGCGCAGCGGCTTAAGATTGAAGCCAACCAAATCCGACCCGGGGCTGGGAATGGAAACCCTTTCTACGGAGGGCTCCCCCCTCAGTATGGTCAGACCCAGCTCCACCAGAACCAGACCCAGCACCAGCACCAGCAGCATCACAACCAGGGCGTCGCCAGTGGGCAGGCTCACCCGAGCTACATGGATTTCAACGGGAGGGCATAG

Protein Analysis

343

Amino Acids

37.41

Weight (kDa)

6.46

Isoelectric Point (pI)

52.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 187 - 239 1.2e-07 Basic region leucine zipper
bZIP_1 PF00170 190 - 238 4.3e-08 bZIP transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 725
AccI GTMKAC 1 cut(s) 369
AccII CGCG 1 cut(s) 96
AccIII TCCGGA 1 cut(s) 354
AclWI GGATC 1 cut(s) 435
AcuI CTGAAG 1 cut(s) 653
AcvI CACGTG 1 cut(s) 221
AcyI GRCGYC 1 cut(s) 975
AflII CTTAAG 2 cut(s) 815, 836
AgsI TTSAA 4 cut(s) 61, 517, 845, 1015
AhdI GACNNNNNGTC 1 cut(s) 472
AjnI CCWGG 4 cut(s) 390, 396, 696, 969
AluBI AGCT 9 cut(s) 530, 550, 575, 590, 646, 751, 790, 925, 1002
AluI AGCT 9 cut(s) 530, 550, 575, 590, 646, 751, 790, 925, 1002
Alw21I GWGCWC 2 cut(s) 552, 753
Alw26I GTCTC 4 cut(s) 77, 441, 532, 711
AlwI GGATC 1 cut(s) 435
AlwNI CAGNNNCTG 1 cut(s) 772
Ama87I CYCGRG 4 cut(s) 254, 271, 863, 997
Aor13HI TCCGGA 1 cut(s) 354
AoxI GGCC 3 cut(s) 277, 388, 394
ApeKI GCWGC 6 cut(s) 35, 38, 344, 605, 829, 958
Asp700I GAANNNNTTC 1 cut(s) 512
AspLEI GCGC 3 cut(s) 35, 96, 829
AspS9I GGNCC 5 cut(s) 44, 99, 277, 394, 612
AsuC2I CCSGG 3 cut(s) 113, 864, 865
AsuHPI GGTGA 4 cut(s) 493, 508, 640, 986
AvaI CYCGRG 4 cut(s) 254, 271, 863, 997
AvaII GGWCC 3 cut(s) 44, 99, 612
BanII GRGCYC 4 cut(s) 118, 552, 753, 900
BbrPI CACGTG 1 cut(s) 221
Bbv12I GWGCWC 2 cut(s) 552, 753
BbvCI CCTCAGC 1 cut(s) 90
BbvI GCAGC 6 cut(s) 22, 25, 331, 592, 841, 970
BccI CCATC 1 cut(s) 457
BceAI ACGGC 2 cut(s) 403, 526
BcgI CGANNNNNNTGC 2 cut(s) 419, 453
BciT130I CCWGG 4 cut(s) 392, 398, 698, 971
BclI TGATCA 1 cut(s) 498
BcnI CCSGG 3 cut(s) 113, 864, 865
BcoDI GTCTC 4 cut(s) 77, 441, 532, 711
BfmI CTRYAG 1 cut(s) 764
BfoI RGCGCY 1 cut(s) 36
BfrI CTTAAG 2 cut(s) 815, 836
BisI GCNGC 7 cut(s) 36, 39, 345, 606, 830, 833, 959
BlpI GCTNAGC 1 cut(s) 546
BlsI GCNGC 7 cut(s) 37, 40, 346, 607, 831, 834, 960
Bme1390I CCNGG 7 cut(s) 113, 392, 398, 698, 864, 865, 971
Bme18I GGWCC 3 cut(s) 44, 99, 612
BmeRI GACNNNNNGTC 1 cut(s) 472
BmeT110I CYCGRG 4 cut(s) 254, 271, 863, 997
BmgT120I GGNCC 5 cut(s) 44, 99, 277, 394, 612
BmiI GGNNCC 7 cut(s) 46, 100, 101, 278, 331, 359, 899
BmrFI CCNGG 7 cut(s) 113, 392, 398, 698, 864, 865, 971
BmrI ACTGGG 1 cut(s) 432
BmsI GCATC 3 cut(s) 465, 787, 970
BmuI ACTGGG 1 cut(s) 432
BplI GAGNNNNNCTC 2 cut(s) 473, 505
BpmI CTGGAG 2 cut(s) 668, 794
Bpu10I CCTNAGC 1 cut(s) 90
Bpu1102I GCTNAGC 1 cut(s) 546
BpuEI CTTGAG 1 cut(s) 823
BpuMI CCSGG 3 cut(s) 113, 864, 865
BsaAI YACGTR 1 cut(s) 221
BsaHI GRCGYC 1 cut(s) 975
BsaI GGTCTC 2 cut(s) 77, 441
BsaJI CCNNGG 9 cut(s) 270, 391, 397, 615, 675, 696, 863, 864, 970
BsaWI WCCGGW 1 cut(s) 354
BsaXI ACNNNNNCTCC 4 cut(s) 62, 92, 281, 311
Bse1I ACTGG 2 cut(s) 427, 981
BseAI TCCGGA 1 cut(s) 354
BseBI CCWGG 4 cut(s) 392, 398, 698, 971
BseDI CCNNGG 9 cut(s) 270, 391, 397, 615, 675, 696, 863, 864, 970
BseGI GGATG 1 cut(s) 128
BseMII CTCAG 5 cut(s) 104, 525, 537, 729, 920
BseNI ACTGG 2 cut(s) 427, 981
BseRI GAGGAG 4 cut(s) 149, 152, 259, 289
BseXI GCAGC 6 cut(s) 22, 25, 331, 592, 841, 970
BseYI CCCAGC 3 cut(s) 869, 921, 942
BsgI GTGCAG 1 cut(s) 680
Bsh1236I CGCG 1 cut(s) 96
BshFI GGCC 3 cut(s) 279, 390, 396
BsiHKAI GWGCWC 2 cut(s) 552, 753
BsiHKCI CYCGRG 4 cut(s) 254, 271, 863, 997
BsiSI CCGG 5 cut(s) 42, 112, 327, 355, 864
BslFI GGGAC 1 cut(s) 85
BsmAI GTCTC 4 cut(s) 77, 441, 532, 711
BsmFI GGGAC 1 cut(s) 85
BsnI GGCC 3 cut(s) 279, 390, 396
Bso31I GGTCTC 2 cut(s) 77, 441
BsoBI CYCGRG 4 cut(s) 254, 271, 863, 997
Bsp1286I GDGCHC 4 cut(s) 118, 552, 753, 900
Bsp13I TCCGGA 1 cut(s) 354
Bsp143I GATC 2 cut(s) 440, 498
Bsp1720I GCTNAGC 1 cut(s) 546
BspANI GGCC 3 cut(s) 279, 390, 396
BspCNI CTCAG 5 cut(s) 103, 526, 538, 730, 919
BspEI TCCGGA 1 cut(s) 354
BspFNI CGCG 1 cut(s) 96
BspLI GGNNCC 7 cut(s) 46, 100, 101, 278, 331, 359, 899
BspPI GGATC 1 cut(s) 435
BspTI CTTAAG 2 cut(s) 815, 836
BspTNI GGTCTC 2 cut(s) 77, 441
BsrI ACTGG 2 cut(s) 427, 981
BssECI CCNNGG 9 cut(s) 270, 391, 397, 615, 675, 696, 863, 864, 970
BssMI GATC 2 cut(s) 440, 498
BssNI GRCGYC 1 cut(s) 975
BssT1I CCWWGG 1 cut(s) 615
Bst2UI CCWGG 4 cut(s) 392, 398, 698, 971
Bst4CI ACNGT 2 cut(s) 470, 727
Bst6I CTCTTC 2 cut(s) 170, 672
BstACI GRCGYC 1 cut(s) 975
BstAFI CTTAAG 2 cut(s) 815, 836
BstBAI YACGTR 1 cut(s) 221
BstC8I GCNNGC 1 cut(s) 990
BstDEI CTNAG 7 cut(s) 90, 534, 546, 567, 738, 791, 906
BstF5I GGATG 1 cut(s) 128
BstFNI CGCG 1 cut(s) 96
BstH2I RGCGCY 1 cut(s) 36
BstHHI GCGC 3 cut(s) 35, 96, 829
BstKTI GATC 2 cut(s) 443, 501
BstMAI GTCTC 4 cut(s) 77, 441, 532, 711
BstMBI GATC 2 cut(s) 440, 498
BstMWI GCNNNNNNNGC 3 cut(s) 231, 344, 958
BstNI CCWGG 4 cut(s) 392, 398, 698, 971
BstSCI CCNGG 7 cut(s) 111, 390, 396, 696, 862, 863, 969
BstSFI CTRYAG 1 cut(s) 764
BstUI CGCG 1 cut(s) 96
BstV1I GCAGC 6 cut(s) 22, 25, 331, 592, 841, 970
BsuRI GGCC 3 cut(s) 279, 390, 396
BtgZI GCGATG 1 cut(s) 226
BtsCI GGATG 1 cut(s) 128
BtsI GCAGTG 1 cut(s) 232
BtsIMutI CAGTG 2 cut(s) 232, 988
Cac8I GCNNGC 1 cut(s) 990
CaiI CAGNNNCTG 1 cut(s) 772
CfoI GCGC 3 cut(s) 35, 96, 829
Cfr13I GGNCC 5 cut(s) 44, 99, 277, 394, 612
Cfr9I CCCGGG 1 cut(s) 863
CseI GACGC 1 cut(s) 964
CviAII CATG 3 cut(s) 67, 247, 1006
DdeI CTNAG 7 cut(s) 90, 534, 546, 567, 738, 791, 906
DpnI GATC 2 cut(s) 442, 500
DpnII GATC 2 cut(s) 440, 498
DrdI GACNNNNNNGTC 1 cut(s) 725
DriI GACNNNNNGTC 1 cut(s) 472
DseDI GACNNNNNNGTC 1 cut(s) 725
Eam1104I CTCTTC 2 cut(s) 170, 672
Eam1105I GACNNNNNGTC 1 cut(s) 472
EarI CTCTTC 2 cut(s) 170, 672
EciI GGCGGA 2 cut(s) 500, 682
Ecl136II GAGCTC 2 cut(s) 550, 751
Eco130I CCWWGG 1 cut(s) 615
Eco24I GRGCYC 4 cut(s) 118, 552, 753, 900
Eco31I GGTCTC 2 cut(s) 77, 441
Eco47I GGWCC 3 cut(s) 44, 99, 612
Eco53kI GAGCTC 2 cut(s) 550, 751
Eco57I CTGAAG 1 cut(s) 653
Eco72I CACGTG 1 cut(s) 221
Eco88I CYCGRG 4 cut(s) 254, 271, 863, 997
EcoICRI GAGCTC 2 cut(s) 550, 751
EcoO109I RGGNCCY 1 cut(s) 99
EcoRII CCWGG 4 cut(s) 390, 396, 696, 969
EcoT14I CCWWGG 1 cut(s) 615
EcoT38I GRGCYC 4 cut(s) 118, 552, 753, 900
ErhI CCWWGG 1 cut(s) 615
FaeI CATG 3 cut(s) 70, 250, 1009
FaiI YATR 8 cut(s) 68, 248, 527, 636, 731, 912, 1007, 1027
FaqI GGGAC 1 cut(s) 85
FatI CATG 3 cut(s) 66, 246, 1005
FauI CCCGC 2 cut(s) 89, 222
FbaI TGATCA 1 cut(s) 498
FblI GTMKAC 1 cut(s) 369
Fnu4HI GCNGC 7 cut(s) 36, 39, 345, 606, 830, 833, 959
FokI GGATG 1 cut(s) 115
FriOI GRGCYC 4 cut(s) 118, 552, 753, 900
Fsp4HI GCNGC 7 cut(s) 36, 39, 345, 606, 830, 833, 959
GlaI GCGC 3 cut(s) 34, 95, 828
GluI GCNGC 7 cut(s) 36, 39, 345, 606, 830, 833, 959
GsaI CCCAGC 3 cut(s) 873, 925, 946
GsuI CTGGAG 2 cut(s) 668, 794
HaeII RGCGCY 1 cut(s) 36
HaeIII GGCC 3 cut(s) 279, 390, 396
HapII CCGG 5 cut(s) 42, 112, 327, 355, 864
HgaI GACGC 1 cut(s) 964
HhaI GCGC 3 cut(s) 35, 96, 829
Hin1I GRCGYC 1 cut(s) 975
Hin1II CATG 3 cut(s) 70, 250, 1009
Hin6I GCGC 3 cut(s) 33, 94, 827
HinP1I GCGC 3 cut(s) 33, 94, 827
HincII GTYRAC 2 cut(s) 19, 370
HindII GTYRAC 2 cut(s) 19, 370
HinfI GANTC 7 cut(s) 5, 257, 266, 371, 404, 488, 664
HpaII CCGG 5 cut(s) 42, 112, 327, 355, 864
HphI GGTGA 4 cut(s) 493, 508, 640, 986
Hpy166II GTNNAC 2 cut(s) 19, 370
Hpy188I TCNGA 9 cut(s) 82, 124, 178, 262, 376, 558, 672, 860, 918
Hpy188III TCNNGA 8 cut(s) 52, 254, 355, 438, 460, 517, 533, 773
Hpy8I GTNNAC 2 cut(s) 19, 370
Hpy99I CGWCG 6 cut(s) 155, 266, 371, 389, 496, 980
HpyAV CCTTC 6 cut(s) 58, 142, 183, 304, 619, 649
HpyCH4III ACNGT 2 cut(s) 470, 727
HpyCH4IV ACGT 2 cut(s) 15, 220
HpyCH4V TGCA 1 cut(s) 661
HpyF10VI GCNNNNNNNGC 3 cut(s) 231, 344, 958
HpyF3I CTNAG 7 cut(s) 90, 534, 546, 567, 738, 791, 906
HpySE526I ACGT 2 cut(s) 15, 220
Hsp92I GRCGYC 1 cut(s) 975
Hsp92II CATG 3 cut(s) 70, 250, 1009
HspAI GCGC 3 cut(s) 33, 94, 827
KflI GGGWCCC 1 cut(s) 99
Kpn2I TCCGGA 1 cut(s) 354
Ksp22I TGATCA 1 cut(s) 498
Kzo9I GATC 2 cut(s) 440, 498
LmnI GCTCC 8 cut(s) 70, 335, 357, 535, 748, 775, 903, 930
Lsp1109I GCAGC 6 cut(s) 22, 25, 331, 592, 841, 970
LweI GCATC 3 cut(s) 465, 787, 970
MaeII ACGT 2 cut(s) 15, 220
MaeIII GTNAC 3 cut(s) 227, 700, 708
MalI GATC 2 cut(s) 442, 500
MboI GATC 2 cut(s) 440, 498
MboII GAAGA 2 cut(s) 157, 659
MhlI GDGCHC 4 cut(s) 118, 552, 753, 900
MlyI GAGTC 5 cut(s) 260, 266, 365, 482, 658
MmeI TCCRAC 6 cut(s) 33, 60, 147, 201, 285, 883
MroI TCCGGA 1 cut(s) 354
MroXI GAANNNNTTC 1 cut(s) 512
MseI TTAA 2 cut(s) 816, 837
MslI CAYNNNNRTG 2 cut(s) 245, 461
MspA1I CMGCKG 3 cut(s) 344, 605, 832
MspCI CTTAAG 2 cut(s) 815, 836
MspI CCGG 5 cut(s) 42, 112, 327, 355, 864
MspR9I CCNGG 7 cut(s) 113, 392, 398, 698, 864, 865, 971
MvaI CCWGG 4 cut(s) 392, 398, 698, 971
MvnI CGCG 1 cut(s) 96
MwoI GCNNNNNNNGC 3 cut(s) 231, 344, 958
NciI CCSGG 3 cut(s) 113, 864, 865
NdeII GATC 2 cut(s) 440, 498
NlaIII CATG 3 cut(s) 70, 250, 1009
NlaIV GGNNCC 7 cut(s) 46, 100, 101, 278, 331, 359, 899
NmuCI GTSAC 2 cut(s) 227, 700
PaeR7I CTCGAG 1 cut(s) 254
PcsI WCGNNNNNNNCGW 2 cut(s) 174, 261
PdmI GAANNNNTTC 1 cut(s) 512
PfeI GAWTC 2 cut(s) 5, 404
PkrI GCNGC 7 cut(s) 37, 40, 346, 607, 831, 834, 960
PleI GAGTC 5 cut(s) 260, 265, 365, 482, 658
PmaCI CACGTG 1 cut(s) 221
PmlI CACGTG 1 cut(s) 221
PpsI GAGTC 5 cut(s) 260, 265, 365, 482, 658
Ppu21I YACGTR 1 cut(s) 221
PpuMI RGGWCCY 1 cut(s) 99
Psp124BI GAGCTC 2 cut(s) 552, 753
Psp5II RGGWCCY 1 cut(s) 99
Psp6I CCWGG 4 cut(s) 390, 396, 696, 969
PspCI CACGTG 1 cut(s) 221
PspFI CCCAGC 3 cut(s) 869, 921, 942
PspGI CCWGG 4 cut(s) 390, 396, 696, 969
PspN4I GGNNCC 7 cut(s) 46, 100, 101, 278, 331, 359, 899
PspPI GGNCC 5 cut(s) 44, 99, 277, 394, 612
PspPPI RGGWCCY 1 cut(s) 99
PstNI CAGNNNCTG 1 cut(s) 772
RseI CAYNNNNRTG 2 cut(s) 245, 461
SacI GAGCTC 2 cut(s) 552, 753
SalI GTCGAC 1 cut(s) 368
SaqAI TTAA 2 cut(s) 816, 837
SatI GCNGC 7 cut(s) 36, 39, 345, 606, 830, 833, 959
Sau3AI GATC 2 cut(s) 440, 498
Sau96I GGNCC 5 cut(s) 44, 99, 277, 394, 612
SchI GAGTC 5 cut(s) 260, 266, 365, 482, 658
ScrFI CCNGG 7 cut(s) 113, 392, 398, 698, 864, 865, 971
SduI GDGCHC 4 cut(s) 118, 552, 753, 900
SfaNI GCATC 3 cut(s) 465, 787, 970
SfcI CTRYAG 1 cut(s) 764
Sfr274I CTCGAG 1 cut(s) 254
SinI GGWCC 3 cut(s) 44, 99, 612
SlaI CTCGAG 1 cut(s) 254
SmaI CCCGGG 1 cut(s) 865
SmiMI CAYNNNNRTG 2 cut(s) 245, 461
SmlI CTYRAG 4 cut(s) 254, 802, 815, 836
SmoI CTYRAG 4 cut(s) 254, 802, 815, 836
SstI GAGCTC 2 cut(s) 552, 753
StyD4I CCNGG 7 cut(s) 111, 390, 396, 696, 862, 863, 969
StyI CCWWGG 1 cut(s) 615
TaaI ACNGT 2 cut(s) 470, 727
TaiI ACGT 2 cut(s) 18, 223
TaqI TCGA 9 cut(s) 150, 168, 183, 255, 369, 384, 439, 461, 480
TaqII GACCGA 2 cut(s) 575, 689
TauI GCSGC 1 cut(s) 835
TfiI GAWTC 2 cut(s) 5, 404
Tru1I TTAA 2 cut(s) 816, 837
Tru9I TTAA 2 cut(s) 816, 837
TscAI CASTG 2 cut(s) 232, 988
TseFI GTSAC 2 cut(s) 227, 700
TseI GCWGC 6 cut(s) 35, 38, 344, 605, 829, 958
Tsp45I GTSAC 2 cut(s) 227, 700
TspGWI ACGGA 2 cut(s) 355, 906
TspMI CCCGGG 1 cut(s) 863
TspRI CASTG 2 cut(s) 232, 988
Vha464I CTTAAG 2 cut(s) 815, 836
VpaK11BI GGWCC 3 cut(s) 44, 99, 612
XhoI CTCGAG 1 cut(s) 254
XmaI CCCGGG 1 cut(s) 863
XmiI GTMKAC 1 cut(s) 369
XmnI GAANNNNTTC 1 cut(s) 512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.