Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G43700 |
| fragaria_vesca | FvH4_2g14020 FvH4_2g14020 |
| malus_domestica | MD05G1022300.v1.1 MD10G1023800.v1.1 |
| prunus_persica | Prupe.8G026300_v2.0.a1 |
| pyrus_communis | pycom05g01310 pycom10g01570 |
| rosa_chinensis | RchiOBHm_Chr6g0275921 |
| rosa_laevigata | RLG00000013423 |
| rosa_multiflora | Rmu_co8294175.1_g000001 Rmu_sc0002030.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00192770 |
| rosa_rugosa | Rorug06G0097400 Rorug06G0097500 Rorug06G0097600 |
| rosa_samantha | Rh6AG209000 Rh6BG213100 Rh6CG215800 Rh6DG205400 |
| rosa_wichuraiana | Rw6G018220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 956 |
| Acc36I | ACCTGC | 1 cut(s) | 47 |
| AccII | CGCG | 1 cut(s) | 327 |
| AccIII | TCCGGA | 1 cut(s) | 585 |
| AclWI | GGATC | 1 cut(s) | 666 |
| AcoI | YGGCCR | 1 cut(s) | 567 |
| AcuI | CTGAAG | 1 cut(s) | 884 |
| AcvI | CACGTG | 1 cut(s) | 452 |
| AcyI | GRCGYC | 2 cut(s) | 148, 1200 |
| AflII | CTTAAG | 2 cut(s) | 1046, 1067 |
| AgsI | TTSAA | 5 cut(s) | 30, 292, 748, 1076, 1240 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 703 |
| AjnI | CCWGG | 5 cut(s) | 143, 621, 627, 927, 1194 |
| Alw21I | GWGCWC | 2 cut(s) | 783, 984 |
| Alw26I | GTCTC | 4 cut(s) | 308, 672, 763, 942 |
| AlwI | GGATC | 1 cut(s) | 666 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1003 |
| Ama87I | CYCGRG | 4 cut(s) | 485, 502, 1094, 1222 |
| Aor13HI | TCCGGA | 1 cut(s) | 585 |
| AoxI | GGCC | 4 cut(s) | 508, 567, 619, 625 |
| ApeKI | GCWGC | 8 cut(s) | 20, 266, 269, 456, 575, 836, 1060, 1183 |
| AseI | ATTAAT | 1 cut(s) | 129 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 743 |
| AspLEI | GCGC | 3 cut(s) | 266, 327, 1060 |
| AspS9I | GGNCC | 4 cut(s) | 275, 330, 508, 625 |
| AsuC2I | CCSGG | 4 cut(s) | 284, 344, 1095, 1096 |
| AsuHPI | GGTGA | 9 cut(s) | 125, 143, 156, 176, 724, 739, 871, 925, 1211 |
| AvaI | CYCGRG | 4 cut(s) | 485, 502, 1094, 1222 |
| AvaII | GGWCC | 2 cut(s) | 275, 330 |
| BanII | GRGCYC | 4 cut(s) | 349, 783, 984, 1131 |
| BbrPI | CACGTG | 1 cut(s) | 452 |
| Bbv12I | GWGCWC | 2 cut(s) | 783, 984 |
| BbvCI | CCTCAGC | 1 cut(s) | 321 |
| BbvI | GCAGC | 8 cut(s) | 7, 253, 256, 468, 562, 823, 1072, 1195 |
| BccI | CCATC | 1 cut(s) | 688 |
| BceAI | ACGGC | 4 cut(s) | 582, 634, 715, 757 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 650, 684 |
| BciT130I | CCWGG | 5 cut(s) | 145, 623, 629, 929, 1196 |
| BclI | TGATCA | 1 cut(s) | 729 |
| BcnI | CCSGG | 4 cut(s) | 284, 344, 1095, 1096 |
| BcoDI | GTCTC | 4 cut(s) | 308, 672, 763, 942 |
| BfmI | CTRYAG | 1 cut(s) | 995 |
| BfoI | RGCGCY | 1 cut(s) | 267 |
| BfrI | CTTAAG | 2 cut(s) | 1046, 1067 |
| BfuAI | ACCTGC | 1 cut(s) | 47 |
| BisI | GCNGC | 9 cut(s) | 21, 267, 270, 457, 576, 837, 1061, 1064, 1184 |
| BlpI | GCTNAGC | 1 cut(s) | 777 |
| BlsI | GCNGC | 9 cut(s) | 22, 268, 271, 458, 577, 838, 1062, 1065, 1185 |
| Bme1390I | CCNGG | 9 cut(s) | 145, 284, 344, 623, 629, 929, 1095, 1096, 1196 |
| Bme18I | GGWCC | 2 cut(s) | 275, 330 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 703 |
| BmeT110I | CYCGRG | 4 cut(s) | 485, 502, 1094, 1222 |
| BmgT120I | GGNCC | 4 cut(s) | 275, 330, 508, 625 |
| BmiI | GGNNCC | 7 cut(s) | 277, 331, 332, 509, 562, 590, 1130 |
| BmrFI | CCNGG | 9 cut(s) | 145, 284, 344, 623, 629, 929, 1095, 1096, 1196 |
| BmrI | ACTGGG | 2 cut(s) | 42, 663 |
| BmsI | GCATC | 3 cut(s) | 696, 1018, 1195 |
| BmuI | ACTGGG | 2 cut(s) | 42, 663 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 704, 736 |
| BpmI | CTGGAG | 2 cut(s) | 899, 1025 |
| Bpu10I | CCTNAGC | 1 cut(s) | 321 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 777 |
| BpuEI | CTTGAG | 1 cut(s) | 1054 |
| BpuMI | CCSGG | 4 cut(s) | 284, 344, 1095, 1096 |
| BsaAI | YACGTR | 1 cut(s) | 452 |
| BsaHI | GRCGYC | 2 cut(s) | 148, 1200 |
| BsaI | GGTCTC | 2 cut(s) | 308, 672 |
| BsaJI | CCNNGG | 9 cut(s) | 501, 564, 622, 628, 906, 927, 1094, 1095, 1195 |
| BsaWI | WCCGGW | 1 cut(s) | 585 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 293, 323, 512, 542 |
| Bse118I | RCCGGY | 1 cut(s) | 1179 |
| Bse1I | ACTGG | 3 cut(s) | 48, 658, 1206 |
| BseAI | TCCGGA | 1 cut(s) | 585 |
| BseBI | CCWGG | 5 cut(s) | 145, 623, 629, 929, 1196 |
| BseDI | CCNNGG | 9 cut(s) | 501, 564, 622, 628, 906, 927, 1094, 1095, 1195 |
| BseGI | GGATG | 1 cut(s) | 359 |
| BseMII | CTCAG | 5 cut(s) | 335, 756, 768, 960, 1151 |
| BseNI | ACTGG | 3 cut(s) | 48, 658, 1206 |
| BseRI | GAGGAG | 4 cut(s) | 380, 383, 490, 520 |
| BseXI | GCAGC | 8 cut(s) | 7, 253, 256, 468, 562, 823, 1072, 1195 |
| BseYI | CCCAGC | 3 cut(s) | 1100, 1152, 1173 |
| BsgI | GTGCAG | 1 cut(s) | 911 |
| Bsh1236I | CGCG | 1 cut(s) | 327 |
| BshFI | GGCC | 4 cut(s) | 510, 569, 621, 627 |
| BsiHKAI | GWGCWC | 2 cut(s) | 783, 984 |
| BsiHKCI | CYCGRG | 4 cut(s) | 485, 502, 1094, 1222 |
| BsiSI | CCGG | 8 cut(s) | 273, 284, 343, 558, 586, 639, 1095, 1180 |
| BslFI | GGGAC | 1 cut(s) | 316 |
| BsmAI | GTCTC | 4 cut(s) | 308, 672, 763, 942 |
| BsmFI | GGGAC | 1 cut(s) | 316 |
| BsmI | GAATGC | 1 cut(s) | 287 |
| BsnI | GGCC | 4 cut(s) | 510, 569, 621, 627 |
| Bso31I | GGTCTC | 2 cut(s) | 308, 672 |
| BsoBI | CYCGRG | 4 cut(s) | 485, 502, 1094, 1222 |
| Bsp1286I | GDGCHC | 4 cut(s) | 349, 783, 984, 1131 |
| Bsp13I | TCCGGA | 1 cut(s) | 585 |
| Bsp143I | GATC | 2 cut(s) | 671, 729 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 777 |
| BspANI | GGCC | 4 cut(s) | 510, 569, 621, 627 |
| BspCNI | CTCAG | 5 cut(s) | 334, 757, 769, 961, 1150 |
| BspEI | TCCGGA | 1 cut(s) | 585 |
| BspFNI | CGCG | 1 cut(s) | 327 |
| BspLI | GGNNCC | 7 cut(s) | 277, 331, 332, 509, 562, 590, 1130 |
| BspMI | ACCTGC | 1 cut(s) | 47 |
| BspPI | GGATC | 1 cut(s) | 666 |
| BspTI | CTTAAG | 2 cut(s) | 1046, 1067 |
| BspTNI | GGTCTC | 2 cut(s) | 308, 672 |
| BsrFI | RCCGGY | 1 cut(s) | 1179 |
| BsrI | ACTGG | 3 cut(s) | 48, 658, 1206 |
| BssAI | RCCGGY | 1 cut(s) | 1179 |
| BssECI | CCNNGG | 9 cut(s) | 501, 564, 622, 628, 906, 927, 1094, 1095, 1195 |
| BssMI | GATC | 2 cut(s) | 671, 729 |
| BssNI | GRCGYC | 2 cut(s) | 148, 1200 |
| Bst2UI | CCWGG | 5 cut(s) | 145, 623, 629, 929, 1196 |
| Bst4CI | ACNGT | 1 cut(s) | 958 |
| Bst6I | CTCTTC | 2 cut(s) | 401, 903 |
| BstACI | GRCGYC | 2 cut(s) | 148, 1200 |
| BstAFI | CTTAAG | 2 cut(s) | 1046, 1067 |
| BstBAI | YACGTR | 1 cut(s) | 452 |
| BstC8I | GCNNGC | 1 cut(s) | 1215 |
| BstDEI | CTNAG | 7 cut(s) | 321, 765, 777, 798, 969, 1022, 1137 |
| BstDSI | CCRYGG | 1 cut(s) | 564 |
| BstEII | GGTNACC | 1 cut(s) | 931 |
| BstF5I | GGATG | 1 cut(s) | 359 |
| BstFNI | CGCG | 1 cut(s) | 327 |
| BstH2I | RGCGCY | 1 cut(s) | 267 |
| BstHHI | GCGC | 3 cut(s) | 266, 327, 1060 |
| BstKTI | GATC | 2 cut(s) | 674, 732 |
| BstMAI | GTCTC | 4 cut(s) | 308, 672, 763, 942 |
| BstMBI | GATC | 2 cut(s) | 671, 729 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 17, 462, 575, 1183 |
| BstNI | CCWGG | 5 cut(s) | 145, 623, 629, 929, 1196 |
| BstPI | GGTNACC | 1 cut(s) | 931 |
| BstSCI | CCNGG | 9 cut(s) | 143, 282, 342, 621, 627, 927, 1093, 1094, 1194 |
| BstSFI | CTRYAG | 1 cut(s) | 995 |
| BstUI | CGCG | 1 cut(s) | 327 |
| BstV1I | GCAGC | 8 cut(s) | 7, 253, 256, 468, 562, 823, 1072, 1195 |
| BsuRI | GGCC | 4 cut(s) | 510, 569, 621, 627 |
| BtgI | CCRYGG | 1 cut(s) | 564 |
| BtgZI | GCGATG | 1 cut(s) | 457 |
| BtsCI | GGATG | 1 cut(s) | 359 |
| BtsIMutI | CAGTG | 1 cut(s) | 1213 |
| BveI | ACCTGC | 1 cut(s) | 47 |
| Cac8I | GCNNGC | 1 cut(s) | 1215 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1003 |
| CfoI | GCGC | 3 cut(s) | 266, 327, 1060 |
| Cfr10I | RCCGGY | 1 cut(s) | 1179 |
| Cfr13I | GGNCC | 4 cut(s) | 275, 330, 508, 625 |
| Cfr9I | CCCGGG | 1 cut(s) | 1094 |
| CseI | GACGC | 2 cut(s) | 137, 1189 |
| CviAII | CATG | 3 cut(s) | 298, 478, 1231 |
| DdeI | CTNAG | 7 cut(s) | 321, 765, 777, 798, 969, 1022, 1137 |
| DpnI | GATC | 2 cut(s) | 673, 731 |
| DpnII | GATC | 2 cut(s) | 671, 729 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 956 |
| DriI | GACNNNNNGTC | 1 cut(s) | 703 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 956 |
| EaeI | YGGCCR | 1 cut(s) | 567 |
| Eam1104I | CTCTTC | 2 cut(s) | 401, 903 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 703 |
| EarI | CTCTTC | 2 cut(s) | 401, 903 |
| EciI | GGCGGA | 2 cut(s) | 731, 913 |
| Ecl136II | GAGCTC | 2 cut(s) | 781, 982 |
| Eco24I | GRGCYC | 4 cut(s) | 349, 783, 984, 1131 |
| Eco31I | GGTCTC | 2 cut(s) | 308, 672 |
| Eco47I | GGWCC | 2 cut(s) | 275, 330 |
| Eco53kI | GAGCTC | 2 cut(s) | 781, 982 |
| Eco57I | CTGAAG | 1 cut(s) | 884 |
| Eco72I | CACGTG | 1 cut(s) | 452 |
| Eco88I | CYCGRG | 4 cut(s) | 485, 502, 1094, 1222 |
| Eco91I | GGTNACC | 1 cut(s) | 931 |
| EcoICRI | GAGCTC | 2 cut(s) | 781, 982 |
| EcoO109I | RGGNCCY | 1 cut(s) | 330 |
| EcoO65I | GGTNACC | 1 cut(s) | 931 |
| EcoRII | CCWGG | 5 cut(s) | 143, 621, 627, 927, 1194 |
| EcoT38I | GRGCYC | 4 cut(s) | 349, 783, 984, 1131 |
| FaeI | CATG | 3 cut(s) | 301, 481, 1234 |
| FaiI | YATR | 9 cut(s) | 36, 299, 479, 758, 867, 962, 1143, 1232, 1252 |
| FaqI | GGGAC | 1 cut(s) | 316 |
| FatI | CATG | 3 cut(s) | 297, 477, 1230 |
| FauI | CCCGC | 2 cut(s) | 320, 453 |
| FbaI | TGATCA | 1 cut(s) | 729 |
| Fnu4HI | GCNGC | 9 cut(s) | 21, 267, 270, 457, 576, 837, 1061, 1064, 1184 |
| FokI | GGATG | 1 cut(s) | 346 |
| FriOI | GRGCYC | 4 cut(s) | 349, 783, 984, 1131 |
| Fsp4HI | GCNGC | 9 cut(s) | 21, 267, 270, 457, 576, 837, 1061, 1064, 1184 |
| GlaI | GCGC | 3 cut(s) | 265, 326, 1059 |
| GluI | GCNGC | 9 cut(s) | 21, 267, 270, 457, 576, 837, 1061, 1064, 1184 |
| GsaI | CCCAGC | 3 cut(s) | 1104, 1156, 1177 |
| GsuI | CTGGAG | 2 cut(s) | 899, 1025 |
| HaeII | RGCGCY | 1 cut(s) | 267 |
| HaeIII | GGCC | 4 cut(s) | 510, 569, 621, 627 |
| HapII | CCGG | 8 cut(s) | 273, 284, 343, 558, 586, 639, 1095, 1180 |
| HgaI | GACGC | 2 cut(s) | 137, 1189 |
| HhaI | GCGC | 3 cut(s) | 266, 327, 1060 |
| Hin1I | GRCGYC | 2 cut(s) | 148, 1200 |
| Hin1II | CATG | 3 cut(s) | 301, 481, 1234 |
| Hin6I | GCGC | 3 cut(s) | 264, 325, 1058 |
| HinP1I | GCGC | 3 cut(s) | 264, 325, 1058 |
| HincII | GTYRAC | 1 cut(s) | 250 |
| HindII | GTYRAC | 1 cut(s) | 250 |
| HinfI | GANTC | 7 cut(s) | 236, 488, 497, 602, 635, 719, 895 |
| HpaII | CCGG | 8 cut(s) | 273, 284, 343, 558, 586, 639, 1095, 1180 |
| HphI | GGTGA | 9 cut(s) | 125, 143, 156, 176, 724, 739, 871, 925, 1211 |
| Hpy166II | GTNNAC | 1 cut(s) | 250 |
| Hpy188I | TCNGA | 8 cut(s) | 313, 355, 409, 493, 607, 789, 903, 1149 |
| Hpy188III | TCNNGA | 7 cut(s) | 485, 586, 669, 691, 748, 764, 1004 |
| Hpy8I | GTNNAC | 1 cut(s) | 250 |
| Hpy99I | CGWCG | 6 cut(s) | 386, 497, 602, 620, 727, 1205 |
| HpyAV | CCTTC | 7 cut(s) | 289, 373, 414, 535, 841, 850, 880 |
| HpyCH4III | ACNGT | 1 cut(s) | 958 |
| HpyCH4IV | ACGT | 2 cut(s) | 246, 451 |
| HpyCH4V | TGCA | 1 cut(s) | 892 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 17, 462, 575, 1183 |
| HpyF3I | CTNAG | 7 cut(s) | 321, 765, 777, 798, 969, 1022, 1137 |
| HpySE526I | ACGT | 2 cut(s) | 246, 451 |
| Hsp92I | GRCGYC | 2 cut(s) | 148, 1200 |
| Hsp92II | CATG | 3 cut(s) | 301, 481, 1234 |
| HspAI | GCGC | 3 cut(s) | 264, 325, 1058 |
| KflI | GGGWCCC | 1 cut(s) | 330 |
| Kpn2I | TCCGGA | 1 cut(s) | 585 |
| Ksp22I | TGATCA | 1 cut(s) | 729 |
| Kzo9I | GATC | 2 cut(s) | 671, 729 |
| LmnI | GCTCC | 8 cut(s) | 301, 566, 588, 766, 979, 1006, 1134, 1161 |
| Lsp1109I | GCAGC | 8 cut(s) | 7, 253, 256, 468, 562, 823, 1072, 1195 |
| LweI | GCATC | 3 cut(s) | 696, 1018, 1195 |
| MaeII | ACGT | 2 cut(s) | 246, 451 |
| MaeIII | GTNAC | 3 cut(s) | 149, 649, 931 |
| MalI | GATC | 2 cut(s) | 673, 731 |
| MboI | GATC | 2 cut(s) | 671, 729 |
| MboII | GAAGA | 3 cut(s) | 18, 388, 890 |
| MhlI | GDGCHC | 4 cut(s) | 349, 783, 984, 1131 |
| MlyI | GAGTC | 4 cut(s) | 491, 497, 713, 889 |
| MmeI | TCCRAC | 5 cut(s) | 264, 291, 378, 432, 516 |
| MroI | TCCGGA | 1 cut(s) | 585 |
| MroXI | GAANNNNTTC | 1 cut(s) | 743 |
| MseI | TTAA | 3 cut(s) | 129, 1047, 1068 |
| MslI | CAYNNNNRTG | 2 cut(s) | 476, 692 |
| MspA1I | CMGCKG | 5 cut(s) | 20, 575, 836, 968, 1063 |
| MspCI | CTTAAG | 2 cut(s) | 1046, 1067 |
| MspI | CCGG | 8 cut(s) | 273, 284, 343, 558, 586, 639, 1095, 1180 |
| MspR9I | CCNGG | 9 cut(s) | 145, 284, 344, 623, 629, 929, 1095, 1096, 1196 |
| Mva1269I | GAATGC | 1 cut(s) | 287 |
| MvaI | CCWGG | 5 cut(s) | 145, 623, 629, 929, 1196 |
| MvnI | CGCG | 1 cut(s) | 327 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 17, 462, 575, 1183 |
| NciI | CCSGG | 4 cut(s) | 284, 344, 1095, 1096 |
| NdeII | GATC | 2 cut(s) | 671, 729 |
| NlaIII | CATG | 3 cut(s) | 301, 481, 1234 |
| NlaIV | GGNNCC | 7 cut(s) | 277, 331, 332, 509, 562, 590, 1130 |
| NmuCI | GTSAC | 3 cut(s) | 149, 649, 931 |
| PaeR7I | CTCGAG | 1 cut(s) | 485 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 405, 492 |
| PctI | GAATGC | 1 cut(s) | 287 |
| PdmI | GAANNNNTTC | 1 cut(s) | 743 |
| PfeI | GAWTC | 3 cut(s) | 236, 602, 635 |
| PkrI | GCNGC | 9 cut(s) | 22, 268, 271, 458, 577, 838, 1062, 1065, 1185 |
| PleI | GAGTC | 4 cut(s) | 491, 496, 713, 889 |
| PmaCI | CACGTG | 1 cut(s) | 452 |
| PmlI | CACGTG | 1 cut(s) | 452 |
| PpsI | GAGTC | 4 cut(s) | 491, 496, 713, 889 |
| Ppu21I | YACGTR | 1 cut(s) | 452 |
| PpuMI | RGGWCCY | 1 cut(s) | 330 |
| PshBI | ATTAAT | 1 cut(s) | 129 |
| Psp124BI | GAGCTC | 2 cut(s) | 783, 984 |
| Psp5II | RGGWCCY | 1 cut(s) | 330 |
| Psp6I | CCWGG | 5 cut(s) | 143, 621, 627, 927, 1194 |
| PspCI | CACGTG | 1 cut(s) | 452 |
| PspEI | GGTNACC | 1 cut(s) | 931 |
| PspFI | CCCAGC | 3 cut(s) | 1100, 1152, 1173 |
| PspGI | CCWGG | 5 cut(s) | 143, 621, 627, 927, 1194 |
| PspN4I | GGNNCC | 7 cut(s) | 277, 331, 332, 509, 562, 590, 1130 |
| PspPI | GGNCC | 4 cut(s) | 275, 330, 508, 625 |
| PspPPI | RGGWCCY | 1 cut(s) | 330 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1003 |
| PvuII | CAGCTG | 1 cut(s) | 20 |
| RseI | CAYNNNNRTG | 2 cut(s) | 476, 692 |
| SacI | GAGCTC | 2 cut(s) | 783, 984 |
| SaqAI | TTAA | 3 cut(s) | 129, 1047, 1068 |
| SatI | GCNGC | 9 cut(s) | 21, 267, 270, 457, 576, 837, 1061, 1064, 1184 |
| Sau3AI | GATC | 2 cut(s) | 671, 729 |
| Sau96I | GGNCC | 4 cut(s) | 275, 330, 508, 625 |
| SchI | GAGTC | 4 cut(s) | 491, 497, 713, 889 |
| ScrFI | CCNGG | 9 cut(s) | 145, 284, 344, 623, 629, 929, 1095, 1096, 1196 |
| SduI | GDGCHC | 4 cut(s) | 349, 783, 984, 1131 |
| SfaNI | GCATC | 3 cut(s) | 696, 1018, 1195 |
| SfcI | CTRYAG | 1 cut(s) | 995 |
| Sfr274I | CTCGAG | 1 cut(s) | 485 |
| SinI | GGWCC | 2 cut(s) | 275, 330 |
| SlaI | CTCGAG | 1 cut(s) | 485 |
| SmaI | CCCGGG | 1 cut(s) | 1096 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 476, 692 |
| SmlI | CTYRAG | 4 cut(s) | 485, 1033, 1046, 1067 |
| SmoI | CTYRAG | 4 cut(s) | 485, 1033, 1046, 1067 |
| SstI | GAGCTC | 2 cut(s) | 783, 984 |
| StyD4I | CCNGG | 9 cut(s) | 143, 282, 342, 621, 627, 927, 1093, 1094, 1194 |
| TaaI | ACNGT | 1 cut(s) | 958 |
| TaiI | ACGT | 2 cut(s) | 249, 454 |
| TaqII | GACCGA | 1 cut(s) | 920 |
| TauI | GCSGC | 1 cut(s) | 1066 |
| TfiI | GAWTC | 3 cut(s) | 236, 602, 635 |
| Tru1I | TTAA | 3 cut(s) | 129, 1047, 1068 |
| Tru9I | TTAA | 3 cut(s) | 129, 1047, 1068 |
| TscAI | CASTG | 1 cut(s) | 1213 |
| TseFI | GTSAC | 3 cut(s) | 149, 649, 931 |
| TseI | GCWGC | 8 cut(s) | 20, 266, 269, 456, 575, 836, 1060, 1183 |
| Tsp45I | GTSAC | 3 cut(s) | 149, 649, 931 |
| TspGWI | ACGGA | 4 cut(s) | 211, 232, 586, 1137 |
| TspMI | CCCGGG | 1 cut(s) | 1094 |
| TspRI | CASTG | 1 cut(s) | 1213 |
| Vha464I | CTTAAG | 2 cut(s) | 1046, 1067 |
| VpaK11BI | GGWCC | 2 cut(s) | 275, 330 |
| VspI | ATTAAT | 1 cut(s) | 129 |
| XhoI | CTCGAG | 1 cut(s) | 485 |
| XmaI | CCCGGG | 1 cut(s) | 1094 |
| XmnI | GAANNNNTTC | 1 cut(s) | 743 |