Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0010378

Physical Location & Seq

Genomic Coordinates Reverse (-)

2385234 .. 2389313

Gene Structure 4080 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G026300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1041 bp

ATGGATTTGAACAACAACTTCACCGGAGCTTCAAGGGCCTCCCCGACCTCCTCGACTGACATGGAGCAGATGTCGGAGACCCCACAGCGCGGGTCCCACCACCGCCGAGCCCACTCCGACACCTCCTTCCGCATCCCCAACTTCGACGACCTCCTCCTCTTCGACCCTTCCGACCTCGACCTCTCCTGCCTCCCCTCCCCACCCGTCCTGCCACGTAGCAGCAACCCAATGACCCAGGACTCCGACGACTCCTCCGGCCCACCCAACCCCTTCTCCAGCTCCAGGCCCGGCGGCCCCACTTCCTCCGGCTCCACCGCCGCCGCAGCCCACCTCCGGAGCCTCTCCGTCGACTCCGACTTCTTCGACGGCCTCGGCCTCGGCACCGGAGGAGACTCCGGCAGAGAAGCCCTTGGGGGGCAGAGGTCTGGGTCCCACCACAGGCACAGCAACTCAATGGACGGCTCCTTTACGCCGTCGTTTGAGGCGGACTCGCCTGTGATCGTGGTGGACGGTATCAAGAAGTCCATAGCTCCTGAGAGACTTGCTGAGCTCTCTCTTATTGATCCGAAGAGAGCTAAAAGGATTTTAGCCAATAGACAATCTGCTGCGCGGTCGAAGGAGAGGAAGGTGAGATATACCAATGAGCTGGAGAGGAAGGTGCAGACGCTTCAGACAGAGGCAACAACCCTATCAGCACAGGTCACTCTGTTACAGAGGGACACTACTGTTATAACTGCTGAGAATAAGGAGCTCAAGCTTCGCTTACAGGCTATGGAGCAGCAAGCACAACTAAGAGATGCCTTGAATGAAAAACTTAAGGAGGAAGTTCAGCGGCTTAAGATTGAAACCAACCAAATCCCACCTGGGAATGGAAACCCTTTCTACAGAGGGCTCCCCCCTCAATATGCCACCCCTCAGTCGTCCTCGCATCATCAGCTTGGTAGCGGCCAGACCCAGCAGCACCATCACATGCTTCACAACCAGGCTGTTTCCAATGGACAGGCTCGCCCAAGCTTCATGGACTTCAACCAGAGGGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006810 GO:0006811 GO:0006820 GO:0006913 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007231 GO:0008150 GO:0008272 GO:0009267 GO:0009292 GO:0009294 GO:0009605 GO:0009606 GO:0009612 GO:0009628 GO:0009652 GO:0009889 GO:0009970 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0015698 GO:0019219 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031323 GO:0031326 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043621 GO:0044424 GO:0044444 GO:0044464 GO:0044764 GO:0045595 GO:0045596 GO:0046907 GO:0048519 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051019 GO:0051093 GO:0051169 GO:0051170 GO:0051171 GO:0051179 GO:0051234 GO:0051252 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071470 GO:0071496 GO:0072348 GO:0080090 GO:0097159 GO:0104004 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

347

Amino Acids

37.85

Weight (kDa)

6.91

Isoelectric Point (pI)

51.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G43700
fragaria_vesca	FvH4_2g14020 FvH4_2g14020
malus_domestica	MD05G1022300.v1.1 MD10G1023800.v1.1
prunus_persica	Prupe.8G026300_v2.0.a1
pyrus_communis	pycom05g01310 pycom10g01570
rosa_chinensis	RchiOBHm_Chr6g0275921
rosa_laevigata	RLG00000013423
rosa_multiflora	Rmu_co8294175.1_g000001 Rmu_sc0002030.1_g000004
rosa_roxburghii	Rroxscaffold_7G00192770
rosa_rugosa	Rorug06G0097400 Rorug06G0097500 Rorug06G0097600
rosa_samantha	Rh6AG209000 Rh6BG213100 Rh6CG215800 Rh6DG205400
rosa_wichuraiana	Rw6G018220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	731
AccB1I	GGYRCC	1 cut(s)	380
AccI	GTMKAC	1 cut(s)	348
AccII	CGCG	2 cut(s)	90, 610
AccIII	TCCGGA	1 cut(s)	333
AclWI	GGATC	1 cut(s)	557
AcoI	YGGCCR	1 cut(s)	946
AcuI	CTGAAG	1 cut(s)	653
AfiI	CCNNNNNNNGG	6 cut(s)	89, 282, 333, 414, 438, 869
AflII	CTTAAG	2 cut(s)	815, 836
AgsI	TTSAA	5 cut(s)	10, 33, 805, 845, 1027
AjnI	CCWGG	4 cut(s)	234, 281, 862, 981
Alw21I	GWGCWC	2 cut(s)	552, 753
Alw26I	GTCTC	3 cut(s)	71, 384, 532
AlwI	GGATC	1 cut(s)	557
Aor13HI	TCCGGA	1 cut(s)	333
AoxI	GGCC	8 cut(s)	36, 256, 284, 292, 367, 373, 946, 1035
ApeKI	GCWGC	5 cut(s)	219, 323, 605, 778, 958
AspLEI	GCGC	2 cut(s)	90, 610
AspS9I	GGNCC	7 cut(s)	36, 93, 257, 285, 293, 429, 1035
AsuC2I	CCSGG	1 cut(s)	288
AsuHPI	GGTGA	2 cut(s)	13, 640
AvaII	GGWCC	2 cut(s)	93, 429
BanI	GGYRCC	1 cut(s)	380
BanII	GRGCYC	4 cut(s)	112, 552, 753, 894
Bbv12I	GWGCWC	2 cut(s)	552, 753
BbvI	GCAGC	5 cut(s)	231, 335, 592, 790, 970
BccI	CCATC	1 cut(s)	972
BceAI	ACGGC	3 cut(s)	382, 457, 475
BciT130I	CCWGG	4 cut(s)	236, 283, 864, 983
BcnI	CCSGG	1 cut(s)	288
BcoDI	GTCTC	3 cut(s)	71, 384, 532
BfaI	CTAG	1 cut(s)	1039
BfmI	CTRYAG	1 cut(s)	883
BfrI	CTTAAG	2 cut(s)	815, 836
BlpI	GCTNAGC	1 cut(s)	546
Bme1390I	CCNGG	5 cut(s)	236, 283, 288, 864, 983
Bme18I	GGWCC	2 cut(s)	93, 429
BmgT120I	GGNCC	7 cut(s)	36, 93, 257, 285, 293, 429, 1035
BmrFI	CCNGG	5 cut(s)	236, 283, 288, 864, 983
BmsI	GCATC	3 cut(s)	141, 787, 937
BplI	GAGNNNNNCTC	2 cut(s)	473, 505
BpmI	CTGGAG	3 cut(s)	259, 265, 668
Bpu1102I	GCTNAGC	1 cut(s)	546
BpuEI	CTTGAG	1 cut(s)	737
BpuMI	CCSGG	1 cut(s)	288
BsaAI	YACGTR	1 cut(s)	215
BsaI	GGTCTC	1 cut(s)	71
BsaJI	CCNNGG	5 cut(s)	234, 370, 376, 409, 863
BsaWI	WCCGGW	3 cut(s)	23, 333, 383
BsaXI	ACNNNNNCTCC	6 cut(s)	56, 86, 236, 257, 266, 287
Bsc4I	CCNNNNNNNGG	6 cut(s)	89, 282, 333, 414, 438, 869
BseAI	TCCGGA	1 cut(s)	333
BseBI	CCWGG	4 cut(s)	236, 283, 864, 983
BseDI	CCNNGG	5 cut(s)	234, 370, 376, 409, 863
BseGI	GGATG	1 cut(s)	132
BseLI	CCNNNNNNNGG	6 cut(s)	89, 282, 333, 414, 438, 869
BseMII	CTCAG	4 cut(s)	525, 537, 729, 929
BseRI	GAGGAG	5 cut(s)	40, 143, 146, 241, 402
BseXI	GCAGC	5 cut(s)	231, 335, 592, 790, 970
BseYI	CCCAGC	1 cut(s)	954
BsgI	GTGCAG	1 cut(s)	680
Bsh1236I	CGCG	2 cut(s)	90, 610
Bsh1285I	CGRYCG	1 cut(s)	614
BshFI	GGCC	8 cut(s)	38, 258, 286, 294, 369, 375, 948, 1037
BshNI	GGYRCC	1 cut(s)	380
BsiEI	CGRYCG	1 cut(s)	614
BsiHKAI	GWGCWC	2 cut(s)	552, 753
BsiSI	CCGG	7 cut(s)	24, 255, 288, 306, 334, 384, 396
BslFI	GGGAC	3 cut(s)	79, 415, 731
BslI	CCNNNNNNNGG	6 cut(s)	89, 282, 333, 414, 438, 869
BsmAI	GTCTC	3 cut(s)	71, 384, 532
BsmFI	GGGAC	3 cut(s)	79, 415, 731
BsnI	GGCC	8 cut(s)	38, 258, 286, 294, 369, 375, 948, 1037
Bso31I	GGTCTC	1 cut(s)	71
Bsp1286I	GDGCHC	4 cut(s)	112, 552, 753, 894
Bsp13I	TCCGGA	1 cut(s)	333
Bsp143I	GATC	2 cut(s)	498, 562
Bsp1720I	GCTNAGC	1 cut(s)	546
BspANI	GGCC	8 cut(s)	38, 258, 286, 294, 369, 375, 948, 1037
BspCNI	CTCAG	4 cut(s)	526, 538, 730, 928
BspEI	TCCGGA	1 cut(s)	333
BspFNI	CGCG	2 cut(s)	90, 610
BspPI	GGATC	1 cut(s)	557
BspT107I	GGYRCC	1 cut(s)	380
BspTI	CTTAAG	2 cut(s)	815, 836
BspTNI	GGTCTC	1 cut(s)	71
BssECI	CCNNGG	5 cut(s)	234, 370, 376, 409, 863
BssMI	GATC	2 cut(s)	498, 562
BssT1I	CCWWGG	1 cut(s)	409
Bst2UI	CCWGG	4 cut(s)	236, 283, 864, 983
Bst4CI	ACNGT	2 cut(s)	512, 727
Bst6I	CTCTTC	2 cut(s)	164, 563
BstAFI	CTTAAG	2 cut(s)	815, 836
BstBAI	YACGTR	1 cut(s)	215
BstC8I	GCNNGC	2 cut(s)	783, 1006
BstDEI	CTNAG	5 cut(s)	534, 546, 738, 791, 915
BstF5I	GGATG	1 cut(s)	132
BstFNI	CGCG	2 cut(s)	90, 610
BstHHI	GCGC	2 cut(s)	90, 610
BstKTI	GATC	2 cut(s)	501, 565
BstMAI	GTCTC	3 cut(s)	71, 384, 532
BstMBI	GATC	2 cut(s)	498, 562
BstMCI	CGRYCG	1 cut(s)	614
BstMWI	GCNNNNNNNGC	3 cut(s)	35, 323, 934
BstNI	CCWGG	4 cut(s)	236, 283, 864, 983
BstNSI	RCATGY	1 cut(s)	973
BstSCI	CCNGG	5 cut(s)	234, 281, 286, 862, 981
BstSFI	CTRYAG	1 cut(s)	883
BstUI	CGCG	2 cut(s)	90, 610
BstV1I	GCAGC	5 cut(s)	231, 335, 592, 790, 970
BstXI	CCANNNNNNTGG	1 cut(s)	646
BsuRI	GGCC	8 cut(s)	38, 258, 286, 294, 369, 375, 948, 1037
BtsCI	GGATG	1 cut(s)	132
Cac8I	GCNNGC	2 cut(s)	783, 1006
CfoI	GCGC	2 cut(s)	90, 610
Cfr13I	GGNCC	7 cut(s)	36, 93, 257, 285, 293, 429, 1035
CseI	GACGC	1 cut(s)	673
CviAII	CATG	3 cut(s)	61, 970, 1018
DdeI	CTNAG	5 cut(s)	534, 546, 738, 791, 915
DpnI	GATC	2 cut(s)	500, 564
DpnII	GATC	2 cut(s)	498, 562
EaeI	YGGCCR	1 cut(s)	946
Eam1104I	CTCTTC	2 cut(s)	164, 563
EarI	CTCTTC	2 cut(s)	164, 563
EciI	GGCGGA	1 cut(s)	500
Ecl136II	GAGCTC	2 cut(s)	550, 751
Eco130I	CCWWGG	1 cut(s)	409
Eco24I	GRGCYC	4 cut(s)	112, 552, 753, 894
Eco31I	GGTCTC	1 cut(s)	71
Eco47I	GGWCC	2 cut(s)	93, 429
Eco53kI	GAGCTC	2 cut(s)	550, 751
Eco57I	CTGAAG	1 cut(s)	653
EcoICRI	GAGCTC	2 cut(s)	550, 751
EcoO109I	RGGNCCY	4 cut(s)	36, 93, 429, 1035
EcoRII	CCWGG	4 cut(s)	234, 281, 862, 981
EcoT14I	CCWWGG	1 cut(s)	409
EcoT38I	GRGCYC	4 cut(s)	112, 552, 753, 894
ErhI	CCWWGG	1 cut(s)	409
FaeI	CATG	3 cut(s)	64, 973, 1021
FaiI	YATR	8 cut(s)	62, 527, 636, 731, 773, 906, 971, 1019
FalI	AAGNNNNNCTT	2 cut(s)	746, 778
FaqI	GGGAC	3 cut(s)	79, 415, 731
FatI	CATG	3 cut(s)	60, 969, 1017
FauI	CCCGC	1 cut(s)	83
FblI	GTMKAC	1 cut(s)	348
FokI	GGATG	1 cut(s)	119
FriOI	GRGCYC	4 cut(s)	112, 552, 753, 894
FspBI	CTAG	1 cut(s)	1039
GlaI	GCGC	2 cut(s)	89, 609
GsaI	CCCAGC	1 cut(s)	958
GsuI	CTGGAG	3 cut(s)	259, 265, 668
HaeIII	GGCC	8 cut(s)	38, 258, 286, 294, 369, 375, 948, 1037
HapII	CCGG	7 cut(s)	24, 255, 288, 306, 334, 384, 396
HgaI	GACGC	1 cut(s)	673
HhaI	GCGC	2 cut(s)	90, 610
Hin1II	CATG	3 cut(s)	64, 973, 1021
Hin6I	GCGC	2 cut(s)	88, 608
HinP1I	GCGC	2 cut(s)	88, 608
HincII	GTYRAC	1 cut(s)	349
HindII	GTYRAC	1 cut(s)	349
HindIII	AAGCTT	2 cut(s)	755, 1012
HinfI	GANTC	5 cut(s)	239, 248, 350, 392, 488
HpaII	CCGG	7 cut(s)	24, 255, 288, 306, 334, 384, 396
HphI	GGTGA	2 cut(s)	13, 640
Hpy166II	GTNNAC	2 cut(s)	349, 508
Hpy188I	TCNGA	7 cut(s)	76, 118, 172, 244, 355, 567, 672
Hpy188III	TCNNGA	3 cut(s)	334, 517, 533
Hpy8I	GTNNAC	2 cut(s)	349, 508
Hpy99I	CGWCG	5 cut(s)	149, 248, 350, 368, 478
HpyAV	CCTTC	6 cut(s)	136, 177, 280, 610, 619, 649
HpyCH4III	ACNGT	2 cut(s)	512, 727
HpyCH4IV	ACGT	1 cut(s)	214
HpyCH4V	TGCA	1 cut(s)	661
HpyF10VI	GCNNNNNNNGC	3 cut(s)	35, 323, 934
HpyF3I	CTNAG	5 cut(s)	534, 546, 738, 791, 915
HpySE526I	ACGT	1 cut(s)	214
Hsp92II	CATG	3 cut(s)	64, 973, 1021
HspAI	GCGC	2 cut(s)	88, 608
KflI	GGGWCCC	2 cut(s)	93, 429
Kpn2I	TCCGGA	1 cut(s)	333
Kzo9I	GATC	2 cut(s)	498, 562
Lsp1109I	GCAGC	5 cut(s)	231, 335, 592, 790, 970
LweI	GCATC	3 cut(s)	141, 787, 937
MaeI	CTAG	1 cut(s)	1039
MaeII	ACGT	1 cut(s)	214
MaeIII	GTNAC	2 cut(s)	700, 708
MalI	GATC	2 cut(s)	500, 564
MboI	GATC	2 cut(s)	498, 562
MboII	GAAGA	3 cut(s)	151, 352, 580
MhlI	GDGCHC	4 cut(s)	112, 552, 753, 894
MlyI	GAGTC	5 cut(s)	233, 242, 344, 386, 482
MmeI	TCCRAC	5 cut(s)	54, 141, 195, 267, 378
MroI	TCCGGA	1 cut(s)	333
MseI	TTAA	2 cut(s)	816, 837
MspA1I	CMGCKG	1 cut(s)	832
MspCI	CTTAAG	2 cut(s)	815, 836
MspI	CCGG	7 cut(s)	24, 255, 288, 306, 334, 384, 396
MspR9I	CCNGG	5 cut(s)	236, 283, 288, 864, 983
MvaI	CCWGG	4 cut(s)	236, 283, 864, 983
MvnI	CGCG	2 cut(s)	90, 610
MwoI	GCNNNNNNNGC	3 cut(s)	35, 323, 934
NciI	CCSGG	1 cut(s)	288
NdeII	GATC	2 cut(s)	498, 562
NlaIII	CATG	3 cut(s)	64, 973, 1021
NmeAIII	GCCGAG	3 cut(s)	131, 351, 357
NmuCI	GTSAC	1 cut(s)	700
NspI	RCATGY	1 cut(s)	973
PcsI	WCGNNNNNNNCGW	1 cut(s)	168
PleI	GAGTC	5 cut(s)	233, 242, 344, 386, 482
PpsI	GAGTC	5 cut(s)	233, 242, 344, 386, 482
Ppu21I	YACGTR	1 cut(s)	215
PpuMI	RGGWCCY	2 cut(s)	93, 429
PsiI	TTATAA	1 cut(s)	731
Psp124BI	GAGCTC	2 cut(s)	552, 753
Psp5II	RGGWCCY	2 cut(s)	93, 429
Psp6I	CCWGG	4 cut(s)	234, 281, 862, 981
PspFI	CCCAGC	1 cut(s)	954
PspGI	CCWGG	4 cut(s)	234, 281, 862, 981
PspPI	GGNCC	7 cut(s)	36, 93, 257, 285, 293, 429, 1035
PspPPI	RGGWCCY	2 cut(s)	93, 429
SacI	GAGCTC	2 cut(s)	552, 753
SalI	GTCGAC	1 cut(s)	347
SaqAI	TTAA	2 cut(s)	816, 837
Sau3AI	GATC	2 cut(s)	498, 562
Sau96I	GGNCC	7 cut(s)	36, 93, 257, 285, 293, 429, 1035
SchI	GAGTC	5 cut(s)	233, 242, 344, 386, 482
ScrFI	CCNGG	5 cut(s)	236, 283, 288, 864, 983
SduI	GDGCHC	4 cut(s)	112, 552, 753, 894
SfaNI	GCATC	3 cut(s)	141, 787, 937
SfcI	CTRYAG	1 cut(s)	883
SinI	GGWCC	2 cut(s)	93, 429
SmlI	CTYRAG	3 cut(s)	752, 815, 836
SmoI	CTYRAG	3 cut(s)	752, 815, 836
SspMI	CTAG	1 cut(s)	1039
SstI	GAGCTC	2 cut(s)	552, 753
StyD4I	CCNGG	5 cut(s)	234, 281, 286, 862, 981
StyI	CCWWGG	1 cut(s)	409
TaaI	ACNGT	2 cut(s)	512, 727
TaiI	ACGT	1 cut(s)	217
TaqI	TCGA	7 cut(s)	53, 144, 162, 177, 348, 363, 614
TauI	GCSGC	5 cut(s)	294, 320, 323, 835, 948
Tru1I	TTAA	2 cut(s)	816, 837
Tru9I	TTAA	2 cut(s)	816, 837
TseFI	GTSAC	1 cut(s)	700
TseI	GCWGC	5 cut(s)	219, 323, 605, 778, 958
Tsp45I	GTSAC	1 cut(s)	700
TspDTI	ATGAA	2 cut(s)	822, 1006
TspGWI	ACGGA	1 cut(s)	334
Vha464I	CTTAAG	2 cut(s)	815, 836
VpaK11BI	GGWCC	2 cut(s)	93, 429
XceI	RCATGY	1 cut(s)	973
XcmI	CCANNNNNNNNNTGG	1 cut(s)	860
XmiI	GTMKAC	1 cut(s)	348
XspI	CTAG	1 cut(s)	1039

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.