Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0010378

Physical Location & Seq

Genomic Coordinates Forward (+)

13045950 .. 13051063

Gene Structure 5114 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0097400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGGGCCCACCACCGAAGACCGCCGGCCGAACGATTTCGCAGGAGGCCTTCGACGAGGTCGTGAAGGAGAACATCGACGATCTCGGCATGGACCCCACCGAGGCCCTCCAGGACGCCATCGAGACCCTAACTCTTCAGGGCGTCGATCTCTCTGGGATTGTCACCTGTGTGCCAGGAGAGGGTGGTGTGAAGGACAACCCTGTGATTCAGTGTCTGGATAGATTGAAGCAGTTGAATTCTGGCGAAAACAGTCAAGTAGGCGATGAGGAGATAGTTCAGTTACTTGATGAACTTACAGAGCTGTGTAATTCTGAAGGTTCTGGAAACTCTGCAATAGCCTCTAGAAACGGCGCGGTTGAGTTGATTTGTTCTATATGTTCTAAGGTTTCGACTGGGTGCCAGGGTGCTCTTGTTTCGGCTTTGAAGGCCATGGCTTCGTTACTTCATGATTTGCAAAGTAGAGAGGCATTTAGAGCAAGTGGTGGACCAAAGCTTGTGGTGGGCATTCTAACTGATGGATTTGAGAATATAGAAATATTGAGCAGTGGCTTTGCTGTCATTGCTGCTGCTGCAACGGGTAATGAGGTTACAAAAGAGTCTTTCATGGAGTTGAAGACTGATGAGCTTATTCTGCGAGCACTTAGTATAAAAAGTGAAGGCAGCGTTGATAGTTTATATGATGCCATACGGATTCTCTTAACACCTGATGATACTCGTGTTTTGGCTTCCCAAGTTTATGGTTATGCGCGGAAATTTGCCAAAATTGGAATTCCAGGAGCTCTGGTTGACTCCATACGTGCGGGGCTAAGCTCACCTAGTCTTGTTTCAGCAAGCATCGCTTTGAAAGCTGTTGCTGCCAATGATGAAATATGTACAACCATTTCTGAACATGGTGGTATTGATGCAGTTCTCATATGCATTGATGACAGTAGTGAACAAGGCAATAAAACTGTTGCTCAAGCTTGTTGTTCTTTGCTCTCCAGGTTGGCAGGAAATGACACAAATAAGAATGCCATTGTTGAGAAGGGAATGGATAGGCTAATGAAACTCTCCGGTAGATTTTCTGATGACCCTTCAGTCCTGCAAGAGATTATGTCTCTTATTTCAGTACTCGCCTTAAGATCCCCTGAAAATGCGGCCCGTGCAATTGAAGCTGGGGCTGGAGAACTTGCAATCCAAGCTATGCAGAACTTCCCTGCGGCACAGCTACTGCAAAGGAATTGTTGTCTCATGATCCGGAATCTTGTTGTAAGAAACTCAGAAAACAGAACAATTATGCTCAATAGTGGTGTTGAAGAATGCATAAGGAAGGCCAAGCACACTCATGCAATCTGTAAGGAGGCTGCTACAGATGCCCTGAGAGATTTGGGATTAGATGATTACTACGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006810 GO:0006811 GO:0006820 GO:0006913 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007231 GO:0008150 GO:0008272 GO:0009267 GO:0009292 GO:0009294 GO:0009605 GO:0009606 GO:0009612 GO:0009628 GO:0009652 GO:0009889 GO:0009970 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0015698 GO:0019219 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031323 GO:0031326 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043621 GO:0044424 GO:0044444 GO:0044464 GO:0044764 GO:0045595 GO:0045596 GO:0046907 GO:0048519 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051019 GO:0051093 GO:0051169 GO:0051170 GO:0051171 GO:0051179 GO:0051234 GO:0051252 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071470 GO:0071496 GO:0072348 GO:0080090 GO:0097159 GO:0104004 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

463

Amino Acids

49.02

Weight (kDa)

4.67

Isoelectric Point (pI)

39.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G43700
fragaria_vesca	FvH4_2g14020 FvH4_2g14020
malus_domestica	MD05G1022300.v1.1 MD10G1023800.v1.1
prunus_persica	Prupe.8G026300_v2.0.a1
pyrus_communis	pycom05g01310 pycom10g01570
rosa_chinensis	RchiOBHm_Chr6g0275921
rosa_laevigata	RLG00000013423
rosa_multiflora	Rmu_co8294175.1_g000001 Rmu_sc0002030.1_g000004
rosa_roxburghii	Rroxscaffold_7G00192770
rosa_rugosa	Rorug06G0097400 Rorug06G0097500 Rorug06G0097600
rosa_samantha	Rh6AG209000 Rh6BG213100 Rh6CG215800 Rh6DG205400
rosa_wichuraiana	Rw6G018220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1076
AccB1I	GGYRCC	1 cut(s)	396
AccII	CGCG	2 cut(s)	353, 748
AccIII	TCCGGA	1 cut(s)	1236
AciI	CCGC	6 cut(s)	21, 353, 748, 800, 1136, 1199
AclWI	GGATC	2 cut(s)	1116, 1228
AcoI	YGGCCR	1 cut(s)	25
AcsI	RAATTY	3 cut(s)	235, 752, 768
AcuI	CTGAAG	3 cut(s)	119, 333, 1059
AcyI	GRCGYC	2 cut(s)	114, 141
AfaI	GTAC	2 cut(s)	874, 1110
AfiI	CCNNNNNNNGG	2 cut(s)	100, 179
AflII	CTTAAG	1 cut(s)	1117
AflIII	ACRYGT	1 cut(s)	1386
AgsI	TTSAA	7 cut(s)	226, 235, 424, 613, 844, 1151, 1295
AjnI	CCWGG	5 cut(s)	108, 172, 399, 772, 980
AleI	CACNNNNGTG	1 cut(s)	167
AloI	GAACNNNNNNTCC	2 cut(s)	1158, 1190
Alw21I	GWGCWC	3 cut(s)	409, 640, 781
Alw26I	GTCTC	3 cut(s)	116, 1101, 1232
AlwI	GGATC	2 cut(s)	1116, 1228
AlwNI	CAGNNNCTG	2 cut(s)	214, 1210
Aor13HI	TCCGGA	1 cut(s)	1236
AoxI	GGCC	7 cut(s)	4, 25, 45, 102, 426, 1137, 1311
ApaI	GGGCCC	1 cut(s)	8
ApeKI	GCWGC	6 cut(s)	563, 566, 569, 660, 854, 1343
ApoI	RAATTY	3 cut(s)	235, 752, 768
Asp700I	GAANNNNTTC	1 cut(s)	34
AspLEI	GCGC	2 cut(s)	353, 748
AspS9I	GGNCC	6 cut(s)	4, 5, 91, 103, 485, 1138
AsuHPI	GGTGA	2 cut(s)	154, 804
AvaII	GGWCC	2 cut(s)	91, 485
BaeGI	GKGCMC	1 cut(s)	8
BaeI	ACNNNNGTAYC	2 cut(s)	702, 735
BanI	GGYRCC	1 cut(s)	396
BanII	GRGCYC	2 cut(s)	8, 781
BauI	CACGAG	1 cut(s)	714
BbsI	GAAGAC	2 cut(s)	23, 620
Bbv12I	GWGCWC	3 cut(s)	409, 640, 781
BbvI	GCAGC	6 cut(s)	550, 553, 556, 672, 841, 1330
BccI	CCATC	2 cut(s)	125, 509
BceAI	ACGGC	1 cut(s)	364
BciT130I	CCWGG	5 cut(s)	110, 174, 401, 774, 982
BcoDI	GTCTC	3 cut(s)	116, 1101, 1232
BfaI	CTAG	2 cut(s)	342, 816
BfmI	CTRYAG	1 cut(s)	1347
BfrI	CTTAAG	1 cut(s)	1117
BisI	GCNGC	8 cut(s)	564, 567, 570, 661, 855, 1137, 1200, 1344
BlpI	GCTNAGC	1 cut(s)	806
BlsI	GCNGC	8 cut(s)	565, 568, 571, 662, 856, 1138, 1201, 1345
BmcAI	AGTACT	1 cut(s)	1110
Bme1390I	CCNGG	5 cut(s)	110, 174, 401, 774, 982
Bme18I	GGWCC	2 cut(s)	91, 485
BmgT120I	GGNCC	6 cut(s)	4, 5, 91, 103, 485, 1138
BmiI	GGNNCC	3 cut(s)	6, 93, 398
BmrFI	CCNGG	5 cut(s)	110, 174, 401, 774, 982
BmrI	ACTGGG	1 cut(s)	402
BmsI	GCATC	4 cut(s)	670, 843, 892, 1342
BmuI	ACTGGG	1 cut(s)	402
BpiI	GAAGAC	2 cut(s)	23, 620
BpmI	CTGGAG	3 cut(s)	92, 964, 1182
Bpu1102I	GCTNAGC	1 cut(s)	806
BpuEI	CTTGAG	1 cut(s)	942
BsaAI	YACGTR	2 cut(s)	797, 1387
BsaHI	GRCGYC	2 cut(s)	114, 141
BsaI	GGTCTC	1 cut(s)	116
BsaJI	CCNNGG	3 cut(s)	99, 400, 429
BsaWI	WCCGGW	2 cut(s)	1052, 1236
BsaXI	ACNNNNNCTCC	2 cut(s)	768, 798
Bsc4I	CCNNNNNNNGG	2 cut(s)	100, 179
Bse118I	RCCGGY	1 cut(s)	23
Bse1I	ACTGG	1 cut(s)	397
Bse3DI	GCAATG	1 cut(s)	558
BseAI	TCCGGA	1 cut(s)	1236
BseBI	CCWGG	5 cut(s)	110, 174, 401, 774, 982
BseDI	CCNNGG	3 cut(s)	99, 400, 429
BseLI	CCNNNNNNNGG	2 cut(s)	100, 179
BseMI	GCAATG	1 cut(s)	558
BseMII	CTCAG	2 cut(s)	1272, 1349
BseNI	ACTGG	1 cut(s)	397
BseRI	GAGGAG	1 cut(s)	281
BseSI	GKGCMC	1 cut(s)	8
BseX3I	CGGCCG	1 cut(s)	25
BseXI	GCAGC	6 cut(s)	550, 553, 556, 672, 841, 1330
BseYI	CCCAGC	1 cut(s)	1154
Bsh1236I	CGCG	2 cut(s)	353, 748
Bsh1285I	CGRYCG	1 cut(s)	28
BshFI	GGCC	7 cut(s)	6, 27, 47, 104, 428, 1139, 1313
BshNI	GGYRCC	1 cut(s)	396
BsiEI	CGRYCG	1 cut(s)	28
BsiHKAI	GWGCWC	3 cut(s)	409, 640, 781
BsiSI	CCGG	3 cut(s)	24, 1053, 1237
BslI	CCNNNNNNNGG	2 cut(s)	100, 179
BsmAI	GTCTC	3 cut(s)	116, 1101, 1232
BsmI	GAATGC	3 cut(s)	504, 1015, 1304
BsnI	GGCC	7 cut(s)	6, 27, 47, 104, 428, 1139, 1313
Bso31I	GGTCTC	1 cut(s)	116
Bsp120I	GGGCCC	1 cut(s)	4
Bsp1286I	GDGCHC	4 cut(s)	8, 409, 640, 781
Bsp13I	TCCGGA	1 cut(s)	1236
Bsp1407I	TGTACA	1 cut(s)	872
Bsp143I	GATC	4 cut(s)	79, 145, 1121, 1233
Bsp1720I	GCTNAGC	1 cut(s)	806
Bsp19I	CCATGG	1 cut(s)	429
BspACI	CCGC	6 cut(s)	21, 353, 748, 800, 1136, 1199
BspANI	GGCC	7 cut(s)	6, 27, 47, 104, 428, 1139, 1313
BspCNI	CTCAG	2 cut(s)	1271, 1350
BspEI	TCCGGA	1 cut(s)	1236
BspFNI	CGCG	2 cut(s)	353, 748
BspHI	TCATGA	2 cut(s)	445, 1230
BspLI	GGNNCC	3 cut(s)	6, 93, 398
BspPI	GGATC	2 cut(s)	1116, 1228
BspT107I	GGYRCC	1 cut(s)	396
BspTI	CTTAAG	1 cut(s)	1117
BspTNI	GGTCTC	1 cut(s)	116
BsrDI	GCAATG	1 cut(s)	558
BsrFI	RCCGGY	1 cut(s)	23
BsrGI	TGTACA	1 cut(s)	872
BsrI	ACTGG	1 cut(s)	397
BssAI	RCCGGY	1 cut(s)	23
BssECI	CCNNGG	3 cut(s)	99, 400, 429
BssMI	GATC	4 cut(s)	79, 145, 1121, 1233
BssNI	GRCGYC	2 cut(s)	114, 141
BssSI	CACGAG	1 cut(s)	714
BssT1I	CCWWGG	1 cut(s)	429
Bst2BI	CACGAG	1 cut(s)	714
Bst2UI	CCWGG	5 cut(s)	110, 174, 401, 774, 982
Bst4CI	ACNGT	3 cut(s)	251, 929, 952
Bst6I	CTCTTC	1 cut(s)	138
BstACI	GRCGYC	2 cut(s)	114, 141
BstAFI	CTTAAG	1 cut(s)	1117
BstAUI	TGTACA	1 cut(s)	872
BstBAI	YACGTR	2 cut(s)	797, 1387
BstC8I	GCNNGC	3 cut(s)	25, 636, 832
BstDEI	CTNAG	5 cut(s)	381, 641, 806, 1258, 1358
BstDSI	CCRYGG	1 cut(s)	429
BstFNI	CGCG	2 cut(s)	353, 748
BstHHI	GCGC	2 cut(s)	353, 748
BstKTI	GATC	4 cut(s)	82, 148, 1124, 1236
BstMAI	GTCTC	3 cut(s)	116, 1101, 1232
BstMBI	GATC	4 cut(s)	79, 145, 1121, 1233
BstMCI	CGRYCG	1 cut(s)	28
BstNI	CCWGG	5 cut(s)	110, 174, 401, 774, 982
BstSCI	CCNGG	5 cut(s)	108, 172, 399, 772, 980
BstSFI	CTRYAG	1 cut(s)	1347
BstSLI	GKGCMC	1 cut(s)	8
BstUI	CGCG	2 cut(s)	353, 748
BstV1I	GCAGC	6 cut(s)	550, 553, 556, 672, 841, 1330
BstV2I	GAAGAC	2 cut(s)	23, 620
BstX2I	RGATCY	1 cut(s)	1121
BstXI	CCANNNNNNTGG	1 cut(s)	737
BstYI	RGATCY	1 cut(s)	1121
BstZI	CGGCCG	1 cut(s)	25
BsuRI	GGCC	7 cut(s)	6, 27, 47, 104, 428, 1139, 1313
BtgI	CCRYGG	1 cut(s)	429
BtgZI	GCGATG	2 cut(s)	276, 820
BtsI	GCAGTG	1 cut(s)	550
BtsIMutI	CAGTG	2 cut(s)	215, 550
Cac8I	GCNNGC	3 cut(s)	25, 636, 832
CaiI	CAGNNNCTG	2 cut(s)	214, 1210
CciI	TCATGA	2 cut(s)	445, 1230
CfoI	GCGC	2 cut(s)	353, 748
Cfr10I	RCCGGY	1 cut(s)	23
Cfr13I	GGNCC	6 cut(s)	4, 5, 91, 103, 485, 1138
CseI	GACGC	2 cut(s)	122, 130
Csp6I	GTAC	2 cut(s)	873, 1109
CspCI	CAANNNNNGTGG	2 cut(s)	477, 512
CviAII	CATG	7 cut(s)	88, 430, 446, 604, 890, 1231, 1325
CviQI	GTAC	2 cut(s)	873, 1109
DdeI	CTNAG	5 cut(s)	381, 641, 806, 1258, 1358
DpnI	GATC	4 cut(s)	81, 147, 1123, 1235
DpnII	GATC	4 cut(s)	79, 145, 1121, 1233
DrdI	GACNNNNNNGTC	1 cut(s)	1076
DseDI	GACNNNNNNGTC	1 cut(s)	1076
EaeI	YGGCCR	1 cut(s)	25
EagI	CGGCCG	1 cut(s)	25
Eam1104I	CTCTTC	1 cut(s)	138
EarI	CTCTTC	1 cut(s)	138
Ecl136II	GAGCTC	1 cut(s)	779
EclXI	CGGCCG	1 cut(s)	25
Eco130I	CCWWGG	1 cut(s)	429
Eco147I	AGGCCT	1 cut(s)	47
Eco24I	GRGCYC	2 cut(s)	8, 781
Eco31I	GGTCTC	1 cut(s)	116
Eco47I	GGWCC	2 cut(s)	91, 485
Eco52I	CGGCCG	1 cut(s)	25
Eco53kI	GAGCTC	1 cut(s)	779
Eco57I	CTGAAG	3 cut(s)	119, 333, 1059
EcoICRI	GAGCTC	1 cut(s)	779
EcoO109I	RGGNCCY	1 cut(s)	103
EcoRI	GAATTC	2 cut(s)	235, 768
EcoRII	CCWGG	5 cut(s)	108, 172, 399, 772, 980
EcoT14I	CCWWGG	1 cut(s)	429
EcoT22I	ATGCAT	2 cut(s)	920, 1304
EcoT38I	GRGCYC	2 cut(s)	8, 781
ErhI	CCWWGG	1 cut(s)	429
FaeI	CATG	7 cut(s)	91, 433, 449, 607, 893, 1234, 1328
FalI	AAGNNNNNCTT	2 cut(s)	823, 855
FatI	CATG	7 cut(s)	87, 429, 445, 603, 889, 1230, 1324
FauI	CCCGC	1 cut(s)	793
FauNDI	CATATG	1 cut(s)	914
Fnu4HI	GCNGC	8 cut(s)	564, 567, 570, 661, 855, 1137, 1200, 1344
FriOI	GRGCYC	2 cut(s)	8, 781
Fsp4HI	GCNGC	8 cut(s)	564, 567, 570, 661, 855, 1137, 1200, 1344
FspBI	CTAG	2 cut(s)	342, 816
GlaI	GCGC	2 cut(s)	352, 747
GluI	GCNGC	8 cut(s)	564, 567, 570, 661, 855, 1137, 1200, 1344
GsaI	CCCAGC	1 cut(s)	1158
GsuI	CTGGAG	3 cut(s)	92, 964, 1182
HaeIII	GGCC	7 cut(s)	6, 27, 47, 104, 428, 1139, 1313
HapII	CCGG	3 cut(s)	24, 1053, 1237
HgaI	GACGC	2 cut(s)	122, 130
HhaI	GCGC	2 cut(s)	353, 748
Hin1I	GRCGYC	2 cut(s)	114, 141
Hin1II	CATG	7 cut(s)	91, 433, 449, 607, 893, 1234, 1328
Hin6I	GCGC	2 cut(s)	351, 746
HinP1I	GCGC	2 cut(s)	351, 746
HincII	GTYRAC	1 cut(s)	787
HindII	GTYRAC	1 cut(s)	787
HindIII	AAGCTT	2 cut(s)	491, 960
HinfI	GANTC	5 cut(s)	205, 596, 691, 788, 1240
HpaII	CCGG	3 cut(s)	24, 1053, 1237
HphI	GGTGA	2 cut(s)	154, 804
Hpy166II	GTNNAC	3 cut(s)	485, 787, 935
Hpy188I	TCNGA	4 cut(s)	313, 886, 1066, 1261
Hpy188III	TCNNGA	8 cut(s)	61, 121, 215, 321, 342, 446, 1231, 1237
Hpy8I	GTNNAC	3 cut(s)	485, 787, 935
Hpy99I	CGWCG	3 cut(s)	56, 80, 146
HpyAV	CCTTC	9 cut(s)	58, 58, 184, 308, 418, 650, 1018, 1083, 1303
HpyCH4III	ACNGT	3 cut(s)	251, 929, 952
HpyCH4IV	ACGT	2 cut(s)	796, 1386
HpyF3I	CTNAG	5 cut(s)	381, 641, 806, 1258, 1358
HpySE526I	ACGT	2 cut(s)	796, 1386
Hsp92I	GRCGYC	2 cut(s)	114, 141
Hsp92II	CATG	7 cut(s)	91, 433, 449, 607, 893, 1234, 1328
HspAI	GCGC	2 cut(s)	351, 746
Kpn2I	TCCGGA	1 cut(s)	1236
KroI	GCCGGC	1 cut(s)	23
KroNI	GCCGGC	1 cut(s)	25
Kzo9I	GATC	4 cut(s)	79, 145, 1121, 1233
LmnI	GCTCC	1 cut(s)	776
Lsp1109I	GCAGC	6 cut(s)	550, 553, 556, 672, 841, 1330
LweI	GCATC	4 cut(s)	670, 843, 892, 1342
MaeI	CTAG	2 cut(s)	342, 816
MaeII	ACGT	2 cut(s)	796, 1386
MaeIII	GTNAC	4 cut(s)	160, 279, 438, 586
MalI	GATC	4 cut(s)	81, 147, 1123, 1235
MboI	GATC	4 cut(s)	79, 145, 1121, 1233
MboII	GAAGA	4 cut(s)	28, 125, 625, 1307
MfeI	CAATTG	1 cut(s)	1146
MflI	RGATCY	1 cut(s)	1121
MhlI	GDGCHC	4 cut(s)	8, 409, 640, 781
MluCI	AATT	8 cut(s)	235, 307, 752, 762, 768, 1146, 1219, 1272
MlyI	GAGTC	2 cut(s)	605, 782
Mph1103I	ATGCAT	2 cut(s)	920, 1304
MroI	TCCGGA	1 cut(s)	1236
MroNI	GCCGGC	1 cut(s)	23
MroXI	GAANNNNTTC	1 cut(s)	34
MseI	TTAA	2 cut(s)	698, 1118
MslI	CAYNNNNRTG	2 cut(s)	167, 1323
MspCI	CTTAAG	1 cut(s)	1117
MspI	CCGG	3 cut(s)	24, 1053, 1237
MspR9I	CCNGG	5 cut(s)	110, 174, 401, 774, 982
MunI	CAATTG	1 cut(s)	1146
Mva1269I	GAATGC	3 cut(s)	504, 1015, 1304
MvaI	CCWGG	5 cut(s)	110, 174, 401, 774, 982
MvnI	CGCG	2 cut(s)	353, 748
NaeI	GCCGGC	1 cut(s)	25
NcoI	CCATGG	1 cut(s)	429
NdeI	CATATG	1 cut(s)	914
NdeII	GATC	4 cut(s)	79, 145, 1121, 1233
NgoMIV	GCCGGC	1 cut(s)	23
NlaIII	CATG	7 cut(s)	91, 433, 449, 607, 893, 1234, 1328
NlaIV	GGNNCC	3 cut(s)	6, 93, 398
NmeAIII	GCCGAG	1 cut(s)	63
NmuCI	GTSAC	1 cut(s)	160
NsiI	ATGCAT	2 cut(s)	920, 1304
OliI	CACNNNNGTG	1 cut(s)	167
PagI	TCATGA	2 cut(s)	445, 1230
PceI	AGGCCT	1 cut(s)	47
PcsI	WCGNNNNNNNCGW	1 cut(s)	57
PctI	GAATGC	3 cut(s)	504, 1015, 1304
PdiI	GCCGGC	1 cut(s)	25
PdmI	GAANNNNTTC	1 cut(s)	34
PfeI	GAWTC	3 cut(s)	205, 691, 1240
PflFI	GACNNNGTC	1 cut(s)	56
PfoI	TCCNGGA	2 cut(s)	108, 772
PkrI	GCNGC	8 cut(s)	565, 568, 571, 662, 856, 1138, 1201, 1345
PleI	GAGTC	2 cut(s)	604, 782
PpsI	GAGTC	2 cut(s)	604, 782
Ppu21I	YACGTR	2 cut(s)	797, 1387
Psp124BI	GAGCTC	1 cut(s)	781
Psp6I	CCWGG	5 cut(s)	108, 172, 399, 772, 980
PspFI	CCCAGC	1 cut(s)	1154
PspGI	CCWGG	5 cut(s)	108, 172, 399, 772, 980
PspN4I	GGNNCC	3 cut(s)	6, 93, 398
PspOMI	GGGCCC	1 cut(s)	4
PspPI	GGNCC	6 cut(s)	4, 5, 91, 103, 485, 1138
PstNI	CAGNNNCTG	2 cut(s)	214, 1210
PsuI	RGATCY	1 cut(s)	1121
PsyI	GACNNNGTC	1 cut(s)	56
RsaI	GTAC	2 cut(s)	874, 1110
RsaNI	GTAC	2 cut(s)	873, 1109
RseI	CAYNNNNRTG	2 cut(s)	167, 1323
SacI	GAGCTC	1 cut(s)	781
SaqAI	TTAA	2 cut(s)	698, 1118
SatI	GCNGC	8 cut(s)	564, 567, 570, 661, 855, 1137, 1200, 1344
Sau3AI	GATC	4 cut(s)	79, 145, 1121, 1233
Sau96I	GGNCC	6 cut(s)	4, 5, 91, 103, 485, 1138
ScaI	AGTACT	1 cut(s)	1110
SchI	GAGTC	2 cut(s)	605, 782
ScrFI	CCNGG	5 cut(s)	110, 174, 401, 774, 982
SduI	GDGCHC	4 cut(s)	8, 409, 640, 781
SfaNI	GCATC	4 cut(s)	670, 843, 892, 1342
SfcI	CTRYAG	1 cut(s)	1347
SinI	GGWCC	2 cut(s)	91, 485
SmiMI	CAYNNNNRTG	2 cut(s)	167, 1323
SmlI	CTYRAG	2 cut(s)	957, 1117
SmoI	CTYRAG	2 cut(s)	957, 1117
Sse9I	AATT	8 cut(s)	235, 307, 752, 762, 768, 1146, 1219, 1272
SseBI	AGGCCT	1 cut(s)	47
SsiI	CCGC	6 cut(s)	21, 353, 748, 800, 1136, 1199
SspI	AATATT	1 cut(s)	537
SspMI	CTAG	2 cut(s)	342, 816
SstI	GAGCTC	1 cut(s)	781
StuI	AGGCCT	1 cut(s)	47
StyD4I	CCNGG	5 cut(s)	108, 172, 399, 772, 980
StyI	CCWWGG	1 cut(s)	429
TaaI	ACNGT	3 cut(s)	251, 929, 952
TaiI	ACGT	2 cut(s)	799, 1389
TaqI	TCGA	5 cut(s)	51, 75, 120, 144, 389
TasI	AATT	8 cut(s)	235, 307, 752, 762, 768, 1146, 1219, 1272
TatI	WGTACW	2 cut(s)	872, 1108
TauI	GCSGC	2 cut(s)	1139, 1202
TfiI	GAWTC	3 cut(s)	205, 691, 1240
Tru1I	TTAA	2 cut(s)	698, 1118
Tru9I	TTAA	2 cut(s)	698, 1118
TscAI	CASTG	2 cut(s)	215, 550
TseFI	GTSAC	1 cut(s)	160
TseI	GCWGC	6 cut(s)	563, 566, 569, 660, 854, 1343
Tsp45I	GTSAC	1 cut(s)	160
TspDTI	ATGAA	5 cut(s)	303, 434, 592, 879, 1058
TspGWI	ACGGA	1 cut(s)	703
TspRI	CASTG	2 cut(s)	215, 550
Tth111I	GACNNNGTC	1 cut(s)	56
Vha464I	CTTAAG	1 cut(s)	1117
VpaK11BI	GGWCC	2 cut(s)	91, 485
XapI	RAATTY	3 cut(s)	235, 752, 768
XbaI	TCTAGA	1 cut(s)	341
XmnI	GAANNNNTTC	1 cut(s)	34
XspI	CTAG	2 cut(s)	342, 816
ZrmI	AGTACT	1 cut(s)	1110
Zsp2I	ATGCAT	2 cut(s)	920, 1304

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.